Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0000771

Physical Location & Seq

Genomic Coordinates Forward (+)

8647197 .. 8652104

Gene Structure 4908 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g15280.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2775 bp

ATGGAGTTGGTGAGCGGATTCCCGTTGCTCCTCCAGCAATTCACGGCCTTGTTCAAGAAGAACCTCCTCCTGGCGTGGCGGCACAAAGTCGGCACCACCGTCCACCTCTTCTCTTCCTTCTTTTTCATTTTCCTCATCTTCTGCATCGAGAAAGCAATCAATGTTCACAACGCGTCGTCCCCGGAGAACAAGAGCGTCACGGACCCCGAGCCGCTGGTCTCGCCGCCCATCCCGCCCTGTGAGGACAAGGATTTCATCAAGAAGCCGTGCTATGACTTTGTGTGGAGCGGCGACGACCCCTTGATCAACGACATTGTGGACGCCATCAGGGACAACAACCCCGGCCGGCGAATCCCCGCCGAAAAGGTGAAAGCGTTTAGAACACCGGCTGAAGTAGACGAATGGCTGCTGGATAATCCTAAGACTTGCCCGGGAGCTTTGCATTTTACGGTGAGAAGTCCCGATGTGATCAGCTATGGCGTGCAGACTAATTCCACTCAAATTTTAAGAAGAGGGGACGGTGAAGATCCCACCTTCAAATTCCAAATTCCGCTTCAGATTGCCGCGGAGCGTGAGATTTTTAGGCATCTGATTGATGTTCCGGATTTTAGCTGGAATATTTCTTTCAAGGAATTTCCACACCCTGCAAGGGAGGTGTCCTCAGCAATGCAGAATATGGGACCAGTCTTCTTCCTTGCAAGCGCAATGTTTGCTTTTGTGTTTCAAATGACTTCTTTGATTACAGAGAAAGAACTAAAGCTCCGAGAGGCAATGACGATGATGGGTCTTTATGATACCGCCTACTGGTTATCATGGCTTGCATGGGAGGGAATCATGACAGTTCTCTCATCGCTTTTCATAGTTCTCTTTGGAATGATGTTTCAGTTCAAGTTTTTCCTAGTCAACAATTTTCTAGTCCTGTATCTTGTCTTCTTTCTTTTCCAATTGAATATGATTGGTTTTGCCTTCATGCTCTCGGCCTTCATAAGCAAGGCATCTTCATCCACAACTGTGGGTTTCATCATATTCATTATTGGCTTTATAACCCAGGGCGTTACAGAGATCGTTCCTTATAAACCTGGAATTCCTGTTCGATATCGAATCGTTTGGTCTTTCTTCCCGCCCAATCTTCTTGCCAAAGCTCTACAGATACTCGCTATTGCAACAGACACTGCCCAACGTGATGGGAAGGAGGGGATTAGGTTGAGTAAAGTATCAGATTGTGAAGATGGGCATAAATCATGTGTTATAACAATTGGTGACATTTACAAATGGCTTGTAGCTACATTCTTCCTCTGGTTTCTTCTGGCTATCTACTTTGATAACATTGTCGCAAATGCATCTGGTGTGAAAAAACCAATGTATTACTTTTTAACTCCTAGCTACTGGTTAGGGTCAAGTGGGGGAAAAGTACAAGAGGGTAACAAAGCGGTAACAAAGGATCATATCGCTCCAGAAGATGTGGATGTCCTTGAAGAGGAGAACCTTGTCAAACAACAATCTATGGAAGGCACACTTGATCCAAAAATTGCAGTTCAGATACGCGGACTTGTTAAAATATATCCTGGGAAAAAAAGACCTTTTTGTTGCTGCTGTTGCTGCTGCTGCTGCAAGGAGACTAAACCTTACACCGCTGTCAAGGGATTATGGGTGAACTTTCCAAAGGATCAATTATTTTGTCTACTTGGACCTAACGGAGCCGGGAAAAGCACAACAATCAGTTGTTTAACTGGAATTGCACCAATTACTGGAGGAGATGCATTAATTTATGACCATTCTGCCCGAAGCACCGGTGGTATGGCAGCTATTCGAAAACTTATAGGAGTTTGTCCACAGTTTGATGTTCTTTGGAAAGCATTAACTGGGAAAGAGCACCTCCACCTGTTCGCTAAGATTAAAGGCCTGTCCCCATCTTCAGTAGAAATGATTGCTCACAAGTCATTGGAGGATGTGAAACTCAGTGACGCAGCTAGCATGAGAGCTGGGAGTTACAGTGGTGGGATGAAACGTCGCCTGAGTGTAGCAATGGCATTTATTGGTGATCCGAAGTTGATCATTTTAGATGAACCGACAACAGGTATGGATCCCATAACAAGAAGGCATGTATGGGACATCATTGAGGAGGCCAAGAAAGGGCGTTCAATTCTCCTAACCACACATTCAATGGAAGAAGCTGACATTTTGAGTGACCGGATAGGAATCATGGCAAAGGGGAAGCTGCGTTGCATCGGAACTTCAATCAGGCTCAAGTCACGTTTTGGGAGTGGTTTTATTGCTAATGTGAGCTTCAGGGGAAGCAGTGATCCACAAAATCATGAAGCAGTGAAGCACTTCTTTAAACAGCATTTGGACGTTATACACAAAAACGAGACCAATTCCTATCTGACTTTTGTTATTCCACAAGAAAAAGAGGGACGTTTACCGAGTTTTTTTGCTGAGCTTGAACATAGGCAACAAGAATTTGGTATAGTTGACATCCAACTTGGTCTTACAACTCTAGAAGAAGTTTTCTTAAATATTTCAAGACAAGCGGAGCTAGATGCCGCCATGGCAGAGGGGAGGCTGGTTACTCTCACCTTAACATCTGGAGAGTCAGTTGAGATACCCGTAGGAGCCAAGTATGCGACGATTCCAAAAACAGAATCCGAAGAGCATCCACAAGGTCTTATGGTAGAAGTTTACTGGGATCAAGATGAGACCGGCAAACTTTGCATTGCTGGTCACTCATCCGAAACTCCAGTACCTCGTAACATTGATCCCAGGAGTTTACATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006869 GO:0008150 GO:0010876 GO:0015399 GO:0015405 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0033036 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane_3 ABC_tran

Protein Analysis

925

Amino Acids

103.37

Weight (kDa)

6.64

Isoelectric Point (pI)

36.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC2_membrane_3	PF12698	205 - 439	2.8e-20	ABC-2 family transporter protein
ABC_tran	PF00005	548 - 692	3.3e-24	ABC transporter
AAA_21	PF13304	647 - 724	4.5e-09	AAA domain, putative AbiEii toxin, Type IV TA system
ABCA11_C	PF25158	836 - 890	2.6e-26	ABC transporter A family member 11-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47730 AT5G61690 AT5G61690 AT5G61730 AT5G61730
fragaria_vesca	FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_5g15280 FvH4_5g17010 FvH4_5g17010 FvH4_5g17010
malus_domestica	MD00G1160200.v1.1 MD11G1124700.v1.1
prunus_persica	Prupe.5G188400_v2.0.a1 Prupe.5G229500_v2.0.a1 Prupe.6G093200_v2.0.a1 Prupe.6G093200_v2.0.a1
pyrus_communis	pycom06g19960 pycom11g10520
rosa_chinensis	RchiOBHm_Chr5g0061021 RchiOBHm_Chr7g0178841 RchiOBHm_Chr7g0180781
rosa_laevigata	RLG00000005230 RLG00000005399 RLG00000005401 RLG00000005403 RLG00000005405 RLG00000035420
rosa_multiflora	Rmu_co8148594.1_g000001 Rmu_co8316781.1_g000001 Rmu_co8482325.1_g000001 Rmu_co8514565.1_g000001 Rmu_sc0000888.1_g000001 Rmu_sc0007457.1_g000010 Rmu_sc0026332.1_g000001 Rmu_ssc0000131.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019630 Rroxscaffold_3G00272530 Rroxscaffold_3G00274500
rosa_rugosa	Rorug01G0114900 Rorug01G0115000 Rorug05G0336100 Rorug06G0420200 Rorug06G0420200 Rorug06G0420300 Rorug06G0420300 Rorug06G0436000
rosa_samantha	Rh1BG106800 Rh5AG398400 Rh5BG411300 Rh5CG436300 Rh5DG425700 Rh7AG019700 Rh7AG037700 Rh7BG019100 Rh7BG037400 Rh7CG019800 Rh7CG039100 Rh7DG019700
rosa_wichuraiana	Rw5G037560 Rw7G001590 Rw7G003110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1043, 1074, 1250
AccB1I	GGYRCC	1 cut(s)	92
AccB7I	CCANNNNNTGG	1 cut(s)	1748
AccBSI	CCGCTC	2 cut(s)	15, 288
AccI	GTMKAC	2 cut(s)	396, 1681
AccII	CGCG	3 cut(s)	173, 566, 1545
AccIII	TCCGGA	1 cut(s)	601
AcoI	YGGCCR	1 cut(s)	343
AcsI	RAATTY	6 cut(s)	501, 539, 546, 632, 1083, 2459
AcuI	CTGAAG	4 cut(s)	411, 539, 1899, 2272
AcyI	GRCGYC	1 cut(s)	321
AfaI	GTAC	2 cut(s)	1413, 2742
AfiI	CCNNNNNNNGG	7 cut(s)	70, 649, 804, 1477, 1748, 2075, 2133
AflIII	ACRYGT	1 cut(s)	171
AgeI	ACCGGT	1 cut(s)	1790
AjnI	CCWGG	5 cut(s)	69, 1047, 1078, 1564, 2759
AjuI	GAANNNNNNNTTGG	2 cut(s)	537, 569
AleI	CACNNNNGTG	1 cut(s)	1010
AloI	GAACNNNNNNTCC	4 cut(s)	744, 776, 1074, 1106
Alw21I	GWGCWC	1 cut(s)	1875
Alw26I	GTCTC	4 cut(s)	223, 1610, 2363, 2690
AlwNI	CAGNNNCTG	1 cut(s)	1172
Ama87I	CYCGRG	2 cut(s)	206, 430
Aor13HI	TCCGGA	1 cut(s)	601
AoxI	GGCC	5 cut(s)	45, 343, 978, 1900, 2124
ApeKI	GCWGC	9 cut(s)	406, 1590, 1599, 1602, 1605, 1608, 1802, 1967, 2218
ApoI	RAATTY	6 cut(s)	501, 539, 546, 632, 1083, 2459
AseI	ATTAAT	1 cut(s)	1763
AsiGI	ACCGGT	1 cut(s)	1790
Asp700I	GAANNNNTTC	1 cut(s)	2330
AspLEI	GCGC	1 cut(s)	704
AspS9I	GGNCC	3 cut(s)	202, 680, 1688
AsuC2I	CCSGG	5 cut(s)	182, 342, 431, 432, 1702
AsuHPI	GGTGA	8 cut(s)	22, 379, 463, 533, 1271, 1663, 2051, 2566
AsuII	TTCGAA	1 cut(s)	1810
AsuNHI	GCTAGC	1 cut(s)	1970
AvaI	CYCGRG	2 cut(s)	206, 430
AvaII	GGWCC	3 cut(s)	202, 680, 1688
BaeI	ACNNNNGTAYC	2 cut(s)	2724, 2757
BamHI	GGATCC	1 cut(s)	2083
BanI	GGYRCC	1 cut(s)	92
BarI	GAAGNNNNNNTAC	2 cut(s)	914, 946
BbsI	GAAGAC	2 cut(s)	679, 922
Bbv12I	GWGCWC	1 cut(s)	1875
BbvCI	CCTCAGC	1 cut(s)	661
BbvI	GCAGC	9 cut(s)	393, 1577, 1586, 1589, 1592, 1595, 1814, 1979, 2205
BccI	CCATC	6 cut(s)	236, 332, 775, 1178, 1223, 1918
BceAI	ACGGC	2 cut(s)	60, 250
BciT130I	CCWGG	5 cut(s)	71, 1049, 1080, 1566, 2761
BclI	TGATCA	3 cut(s)	303, 468, 2052
BcnI	CCSGG	5 cut(s)	182, 342, 431, 432, 1702
BcoDI	GTCTC	4 cut(s)	223, 1610, 2363, 2690
BfaI	CTAG	6 cut(s)	899, 914, 1380, 1971, 2498, 2537
BfmI	CTRYAG	1 cut(s)	1145
BglI	GCCNNNNNGGC	1 cut(s)	2549
BlpI	GCTNAGC	1 cut(s)	2436
Bme18I	GGWCC	3 cut(s)	202, 680, 1688
BmeT110I	CYCGRG	2 cut(s)	206, 430
BmgT120I	GGNCC	3 cut(s)	202, 680, 1688
BmiI	GGNNCC	6 cut(s)	94, 204, 681, 1699, 2085, 2614
BmrI	ACTGGG	2 cut(s)	1872, 2692
BmsI	GCATC	8 cut(s)	153, 595, 1004, 1349, 1747, 2235, 2530, 2662
BmtI	GCTAGC	1 cut(s)	1974
BmuI	ACTGGG	2 cut(s)	1872, 2692
BpiI	GAAGAC	2 cut(s)	679, 922
BplI	GAGNNNNNCTC	2 cut(s)	644, 676
BpmI	CTGGAG	5 cut(s)	17, 1437, 1770, 2607, 2721
Bpu10I	CCTNAGC	1 cut(s)	661
Bpu1102I	GCTNAGC	1 cut(s)	2436
Bpu14I	TTCGAA	1 cut(s)	1810
BpuEI	CTTGAG	1 cut(s)	2231
BpuMI	CCSGG	5 cut(s)	182, 342, 431, 432, 1702
BsaBI	GATNNNNATC	1 cut(s)	2198
BsaHI	GRCGYC	1 cut(s)	321
BsaI	GGTCTC	3 cut(s)	223, 2363, 2690
BsaJI	CCNNGG	9 cut(s)	180, 340, 430, 564, 1047, 1048, 1565, 2547, 2759
BsaWI	WCCGGW	3 cut(s)	601, 1790, 2190
BsaXI	ACNNNNNCTCC	6 cut(s)	744, 774, 1978, 2008, 2580, 2610
Bsc4I	CCNNNNNNNGG	7 cut(s)	70, 649, 804, 1477, 1748, 2075, 2133
Bse118I	RCCGGY	4 cut(s)	345, 385, 1790, 2699
Bse1I	ACTGG	8 cut(s)	683, 809, 1391, 1735, 1753, 1867, 2687, 2738
Bse3DI	GCAATG	5 cut(s)	672, 711, 777, 2031, 2712
Bse8I	GATNNNNATC	1 cut(s)	2198
BseAI	TCCGGA	1 cut(s)	601
BseBI	CCWGG	5 cut(s)	71, 1049, 1080, 1566, 2761
BseDI	CCNNGG	9 cut(s)	180, 340, 430, 564, 1047, 1048, 1565, 2547, 2759
BseGI	GGATG	8 cut(s)	228, 1001, 1471, 1954, 2007, 2475, 2653, 2726
BseJI	GATNNNNATC	1 cut(s)	2198
BseLI	CCNNNNNNNGG	7 cut(s)	70, 649, 804, 1477, 1748, 2075, 2133
BseMI	GCAATG	5 cut(s)	672, 711, 777, 2031, 2712
BseMII	CTCAG	4 cut(s)	675, 1972, 2006, 2427
BseNI	ACTGG	8 cut(s)	683, 809, 1391, 1735, 1753, 1867, 2687, 2738
BseRI	GAGGAG	5 cut(s)	20, 56, 1493, 1767, 2135
BseX3I	CGGCCG	1 cut(s)	343
BseXI	GCAGC	9 cut(s)	393, 1577, 1586, 1589, 1592, 1595, 1814, 1979, 2205
BseYI	CCCAGC	1 cut(s)	1982
BsgI	GTGCAG	1 cut(s)	503
Bsh1236I	CGCG	3 cut(s)	173, 566, 1545
Bsh1285I	CGRYCG	1 cut(s)	346
BshFI	GGCC	5 cut(s)	47, 345, 980, 1902, 2126
BshNI	GGYRCC	1 cut(s)	92
BshTI	ACCGGT	1 cut(s)	1790
BsiEI	CGRYCG	1 cut(s)	346
BsiHKAI	GWGCWC	1 cut(s)	1875
BsiHKCI	CYCGRG	2 cut(s)	206, 430
BslFI	GGGAC	8 cut(s)	163, 344, 444, 530, 693, 1891, 2123, 2427
BslI	CCNNNNNNNGG	7 cut(s)	70, 649, 804, 1477, 1748, 2075, 2133
BsmAI	GTCTC	4 cut(s)	223, 1610, 2363, 2690
BsmFI	GGGAC	8 cut(s)	163, 344, 444, 530, 693, 1891, 2123, 2427
BsnI	GGCC	5 cut(s)	47, 345, 980, 1902, 2126
Bso31I	GGTCTC	3 cut(s)	223, 2363, 2690
BsoBI	CYCGRG	2 cut(s)	206, 430
Bsp119I	TTCGAA	1 cut(s)	1810
Bsp1286I	GDGCHC	1 cut(s)	1875
Bsp13I	TCCGGA	1 cut(s)	601
Bsp1720I	GCTNAGC	1 cut(s)	2436
Bsp19I	CCATGG	1 cut(s)	2547
BspANI	GGCC	5 cut(s)	47, 345, 980, 1902, 2126
BspCNI	CTCAG	4 cut(s)	674, 1971, 2007, 2428
BspEI	TCCGGA	1 cut(s)	601
BspFNI	CGCG	3 cut(s)	173, 566, 1545
BspHI	TCATGA	2 cut(s)	834, 2314
BspLI	GGNNCC	6 cut(s)	94, 204, 681, 1699, 2085, 2614
BspOI	GCTAGC	1 cut(s)	1974
BspQI	GCTCTTC	1 cut(s)	2643
BspT104I	TTCGAA	1 cut(s)	1810
BspT107I	GGYRCC	1 cut(s)	92
BspTNI	GGTCTC	3 cut(s)	223, 2363, 2690
BsrBI	CCGCTC	2 cut(s)	15, 288
BsrDI	GCAATG	5 cut(s)	672, 711, 777, 2031, 2712
BsrFI	RCCGGY	4 cut(s)	345, 385, 1790, 2699
BsrI	ACTGG	8 cut(s)	683, 809, 1391, 1735, 1753, 1867, 2687, 2738
BssAI	RCCGGY	4 cut(s)	345, 385, 1790, 2699
BssECI	CCNNGG	9 cut(s)	180, 340, 430, 564, 1047, 1048, 1565, 2547, 2759
BssNI	GRCGYC	1 cut(s)	321
BssT1I	CCWWGG	1 cut(s)	2547
Bst2UI	CCWGG	5 cut(s)	71, 1049, 1080, 1566, 2761
Bst4CI	ACNGT	7 cut(s)	100, 451, 521, 841, 1012, 1836, 1994
Bst6I	CTCTTC	5 cut(s)	113, 118, 505, 1470, 2643
BstACI	GRCGYC	1 cut(s)	321
BstAPI	GCANNNNNTGC	2 cut(s)	710, 2709
BstBI	TTCGAA	1 cut(s)	1810
BstC8I	GCNNGC	5 cut(s)	347, 482, 700, 819, 1972
BstDEI	CTNAG	6 cut(s)	420, 661, 1890, 1958, 2015, 2436
BstDSI	CCRYGG	2 cut(s)	564, 2547
BstENI	CCTNNNNNAGG	1 cut(s)	1475
BstF5I	GGATG	8 cut(s)	228, 1001, 1471, 1954, 2007, 2475, 2653, 2726
BstFNI	CGCG	3 cut(s)	173, 566, 1545
BstHHI	GCGC	1 cut(s)	704
BstMAI	GTCTC	4 cut(s)	223, 1610, 2363, 2690
BstMCI	CGRYCG	1 cut(s)	346
BstNI	CCWGG	5 cut(s)	71, 1049, 1080, 1566, 2761
BstNSI	RCATGY	1 cut(s)	2105
BstSFI	CTRYAG	1 cut(s)	1145
BstUI	CGCG	3 cut(s)	173, 566, 1545
BstV1I	GCAGC	9 cut(s)	393, 1577, 1586, 1589, 1592, 1595, 1814, 1979, 2205
BstV2I	GAAGAC	2 cut(s)	679, 922
BstX2I	RGATCY	2 cut(s)	526, 2083
BstXI	CCANNNNNNTGG	2 cut(s)	1012, 1184
BstYI	RGATCY	2 cut(s)	526, 2083
BstZI	CGGCCG	1 cut(s)	343
BsuRI	GGCC	5 cut(s)	47, 345, 980, 1902, 2126
BtgI	CCRYGG	2 cut(s)	564, 2547
BtgZI	GCGATG	1 cut(s)	834
BtsCI	GGATG	8 cut(s)	228, 1001, 1471, 1954, 2007, 2475, 2653, 2726
BtsI	GCAGTG	3 cut(s)	1170, 2305, 2328
BtsIMutI	CAGTG	5 cut(s)	1170, 1966, 1999, 2305, 2328
Cac8I	GCNNGC	5 cut(s)	347, 482, 700, 819, 1972
CaiI	CAGNNNCTG	1 cut(s)	1172
CciI	TCATGA	2 cut(s)	834, 2314
CfoI	GCGC	1 cut(s)	704
Cfr10I	RCCGGY	4 cut(s)	345, 385, 1790, 2699
Cfr13I	GGNCC	3 cut(s)	202, 680, 1688
Cfr42I	CCGCGG	1 cut(s)	567
Cfr9I	CCCGGG	1 cut(s)	430
CseI	GACGC	4 cut(s)	162, 184, 329, 1973
Csp6I	GTAC	2 cut(s)	1412, 2741
CspAI	ACCGGT	1 cut(s)	1790
CviQI	GTAC	2 cut(s)	1412, 2741
DdeI	CTNAG	6 cut(s)	420, 661, 1890, 1958, 2015, 2436
DraI	TTTAAA	1 cut(s)	2338
EaeI	YGGCCR	1 cut(s)	343
EagI	CGGCCG	1 cut(s)	343
Eam1104I	CTCTTC	5 cut(s)	113, 118, 505, 1470, 2643
EarI	CTCTTC	5 cut(s)	113, 118, 505, 1470, 2643
EclXI	CGGCCG	1 cut(s)	343
Eco130I	CCWWGG	1 cut(s)	2547
Eco147I	AGGCCT	1 cut(s)	1902
Eco31I	GGTCTC	3 cut(s)	223, 2363, 2690
Eco32I	GATATC	1 cut(s)	1097
Eco47I	GGWCC	3 cut(s)	202, 680, 1688
Eco52I	CGGCCG	1 cut(s)	343
Eco57I	CTGAAG	4 cut(s)	411, 539, 1899, 2272
Eco88I	CYCGRG	2 cut(s)	206, 430
EcoNI	CCTNNNNNAGG	1 cut(s)	1475
EcoRI	GAATTC	1 cut(s)	1083
EcoRII	CCWGG	5 cut(s)	69, 1047, 1078, 1564, 2759
EcoRV	GATATC	1 cut(s)	1097
EcoT14I	CCWWGG	1 cut(s)	2547
EcoT22I	ATGCAT	2 cut(s)	1342, 1762
ErhI	CCWWGG	1 cut(s)	2547
FalI	AAGNNNNNCTT	4 cut(s)	1500, 1532, 2318, 2350
FaqI	GGGAC	8 cut(s)	163, 344, 444, 530, 693, 1891, 2123, 2427
FauI	CCCGC	3 cut(s)	240, 364, 1128
FbaI	TGATCA	3 cut(s)	303, 468, 2052
FblI	GTMKAC	2 cut(s)	396, 1681
FokI	GGATG	8 cut(s)	215, 988, 1478, 1961, 2014, 2462, 2640, 2713
FspBI	CTAG	6 cut(s)	899, 914, 1380, 1971, 2498, 2537
GlaI	GCGC	1 cut(s)	703
GsaI	CCCAGC	1 cut(s)	1986
GsuI	CTGGAG	5 cut(s)	17, 1437, 1770, 2607, 2721
HaeIII	GGCC	5 cut(s)	47, 345, 980, 1902, 2126
HgaI	GACGC	4 cut(s)	162, 184, 329, 1973
HhaI	GCGC	1 cut(s)	704
Hin1I	GRCGYC	1 cut(s)	321
Hin6I	GCGC	1 cut(s)	702
HinP1I	GCGC	1 cut(s)	702
HincII	GTYRAC	2 cut(s)	904, 2473
HindII	GTYRAC	2 cut(s)	904, 2473
HinfI	GANTC	8 cut(s)	18, 351, 831, 1101, 2199, 2591, 2629, 2642
HphI	GGTGA	8 cut(s)	22, 379, 463, 533, 1271, 1663, 2051, 2566
Hpy99I	CGWCG	4 cut(s)	178, 296, 2013, 2629
HpyAV	CCTTC	7 cut(s)	127, 544, 976, 991, 1183, 1502, 2091
HpyCH4III	ACNGT	7 cut(s)	100, 451, 521, 841, 1012, 1836, 1994
HpyCH4IV	ACGT	5 cut(s)	1180, 2008, 2254, 2352, 2416
HpyF3I	CTNAG	6 cut(s)	420, 661, 1890, 1958, 2015, 2436
HpySE526I	ACGT	5 cut(s)	1180, 2008, 2254, 2352, 2416
Hsp92I	GRCGYC	1 cut(s)	321
HspAI	GCGC	1 cut(s)	702
Kpn2I	TCCGGA	1 cut(s)	601
KroI	GCCGGC	1 cut(s)	345
KroNI	GCCGGC	1 cut(s)	347
Ksp22I	TGATCA	3 cut(s)	303, 468, 2052
KspI	CCGCGG	1 cut(s)	567
LguI	GCTCTTC	1 cut(s)	2643
LmnI	GCTCC	9 cut(s)	33, 285, 434, 568, 765, 1456, 1697, 2533, 2612
Lsp1109I	GCAGC	9 cut(s)	393, 1577, 1586, 1589, 1592, 1595, 1814, 1979, 2205
LweI	GCATC	8 cut(s)	153, 595, 1004, 1349, 1747, 2235, 2530, 2662
MaeI	CTAG	6 cut(s)	899, 914, 1380, 1971, 2498, 2537
MaeII	ACGT	5 cut(s)	1180, 2008, 2254, 2352, 2416
MbiI	CCGCTC	2 cut(s)	15, 288
MfeI	CAATTG	2 cut(s)	944, 1254
MflI	RGATCY	2 cut(s)	526, 2083
MhlI	GDGCHC	1 cut(s)	1875
MluI	ACGCGT	1 cut(s)	171
MlyI	GAGTC	1 cut(s)	2600
MmeI	TCCRAC	1 cut(s)	2503
Mph1103I	ATGCAT	2 cut(s)	1342, 1762
MroI	TCCGGA	1 cut(s)	601
MroNI	GCCGGC	1 cut(s)	345
MroXI	GAANNNNTTC	1 cut(s)	2330
MslI	CAYNNNNRTG	1 cut(s)	1010
MspA1I	CMGCKG	3 cut(s)	214, 566, 1634
MunI	CAATTG	2 cut(s)	944, 1254
MvaI	CCWGG	5 cut(s)	71, 1049, 1080, 1566, 2761
MvnI	CGCG	3 cut(s)	173, 566, 1545
NaeI	GCCGGC	1 cut(s)	347
NciI	CCSGG	5 cut(s)	182, 342, 431, 432, 1702
NcoI	CCATGG	1 cut(s)	2547
NgoMIV	GCCGGC	1 cut(s)	345
NheI	GCTAGC	1 cut(s)	1970
NlaIV	GGNNCC	6 cut(s)	94, 204, 681, 1699, 2085, 2614
NmeAIII	GCCGAG	1 cut(s)	956
NmuCI	GTSAC	6 cut(s)	196, 1259, 1961, 2186, 2250, 2720
NsiI	ATGCAT	2 cut(s)	1342, 1762
NspI	RCATGY	1 cut(s)	2105
NspV	TTCGAA	1 cut(s)	1810
OliI	CACNNNNGTG	1 cut(s)	1010
PagI	TCATGA	2 cut(s)	834, 2314
PasI	CCCWGGG	1 cut(s)	1048
PceI	AGGCCT	1 cut(s)	1902
PciSI	GCTCTTC	1 cut(s)	2643
PcsI	WCGNNNNNNNCGW	1 cut(s)	96
PdiI	GCCGGC	1 cut(s)	347
PdmI	GAANNNNTTC	1 cut(s)	2330
PfeI	GAWTC	7 cut(s)	18, 351, 831, 1101, 2199, 2629, 2642
PflMI	CCANNNNNTGG	1 cut(s)	1748
PinAI	ACCGGT	1 cut(s)	1790
PleI	GAGTC	1 cut(s)	2599
PpsI	GAGTC	1 cut(s)	2599
PshBI	ATTAAT	1 cut(s)	1763
PsiI	TTATAA	3 cut(s)	1043, 1074, 1250
Psp6I	CCWGG	5 cut(s)	69, 1047, 1078, 1564, 2759
PspFI	CCCAGC	1 cut(s)	1982
PspGI	CCWGG	5 cut(s)	69, 1047, 1078, 1564, 2759
PspN4I	GGNNCC	6 cut(s)	94, 204, 681, 1699, 2085, 2614
PspPI	GGNCC	3 cut(s)	202, 680, 1688
PstNI	CAGNNNCTG	1 cut(s)	1172
PsuI	RGATCY	2 cut(s)	526, 2083
RsaI	GTAC	2 cut(s)	1413, 2742
RsaNI	GTAC	2 cut(s)	1412, 2741
RseI	CAYNNNNRTG	1 cut(s)	1010
SacII	CCGCGG	1 cut(s)	567
SapI	GCTCTTC	1 cut(s)	2643
Sau96I	GGNCC	3 cut(s)	202, 680, 1688
SchI	GAGTC	1 cut(s)	2600
SduI	GDGCHC	1 cut(s)	1875
SfaNI	GCATC	8 cut(s)	153, 595, 1004, 1349, 1747, 2235, 2530, 2662
SfcI	CTRYAG	1 cut(s)	1145
Sfr303I	CCGCGG	1 cut(s)	567
SfuI	TTCGAA	1 cut(s)	1810
SgrAI	CRCCGGYG	1 cut(s)	1790
SgrBI	CCGCGG	1 cut(s)	567
SinI	GGWCC	3 cut(s)	202, 680, 1688
SmaI	CCCGGG	1 cut(s)	432
SmiMI	CAYNNNNRTG	1 cut(s)	1010
SmlI	CTYRAG	1 cut(s)	2246
SmoI	CTYRAG	1 cut(s)	2246
SseBI	AGGCCT	1 cut(s)	1902
SspI	AATATT	2 cut(s)	619, 2518
SspMI	CTAG	6 cut(s)	899, 914, 1380, 1971, 2498, 2537
StuI	AGGCCT	1 cut(s)	1902
StyI	CCWWGG	1 cut(s)	2547
TaaI	ACNGT	7 cut(s)	100, 451, 521, 841, 1012, 1836, 1994
TaiI	ACGT	5 cut(s)	1183, 2011, 2257, 2355, 2419
TaqI	TCGA	4 cut(s)	147, 1093, 1099, 1810
TatI	WGTACW	1 cut(s)	1411
TauI	GCSGC	6 cut(s)	82, 214, 226, 291, 566, 2546
TfiI	GAWTC	7 cut(s)	18, 351, 831, 1101, 2199, 2629, 2642
TscAI	CASTG	5 cut(s)	1177, 1966, 1999, 2305, 2328
TseFI	GTSAC	6 cut(s)	196, 1259, 1961, 2186, 2250, 2720
TseI	GCWGC	9 cut(s)	406, 1590, 1599, 1602, 1605, 1608, 1802, 1967, 2218
Tsp45I	GTSAC	6 cut(s)	196, 1259, 1961, 2186, 2250, 2720
TspGWI	ACGGA	2 cut(s)	215, 1710
TspMI	CCCGGG	1 cut(s)	430
TspRI	CASTG	5 cut(s)	1177, 1966, 1999, 2305, 2328
Van91I	CCANNNNNTGG	1 cut(s)	1748
VpaK11BI	GGWCC	3 cut(s)	202, 680, 1688
VspI	ATTAAT	1 cut(s)	1763
XagI	CCTNNNNNAGG	1 cut(s)	1475
XapI	RAATTY	6 cut(s)	501, 539, 546, 632, 1083, 2459
XbaI	TCTAGA	1 cut(s)	2497
XceI	RCATGY	1 cut(s)	2105
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2161
XmaI	CCCGGG	1 cut(s)	430
XmiI	GTMKAC	2 cut(s)	396, 1681
XmnI	GAANNNNTTC	1 cut(s)	2330
XspI	CTAG	6 cut(s)	899, 914, 1380, 1971, 2498, 2537
Zsp2I	ATGCAT	2 cut(s)	1342, 1762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.