Rroxscaffold_1G00019630

ABC transporter A family member

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
23988912 .. 23994840
5929 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00019630.1

Sequence Viewer

Length: 2970 bp
ATGTCAAGACTCTCAGAAATCAAACGCTCAAAAGAATCCGCCATGGATTTGCAGAGCGGAGTCCCATTGCTGTTTCAGCAATTCAAGGCTCTGTTCCGGAAGAACCTGGTGCTCGCATGGCGGAAGAAGGCGGCGACGTTCGTCCAACTCTTCTCGTCCTTGTTCTTCGTCTTCCTCCTCTTCTGTATCCAGAAGGCCATGATGGCTCGATTCGCCTCCTCCACCACTTACAAGAGCGTCACCGATCCCCAGCCTCTGGTTGCGCCGCCGATCCCTCCCTGCGAGGACAAGTACTACATCCACAAGCCCTGCTTTGACTTTGTGTGGAGCGGAAATGACAGCCCTAGGATTCGGAGCATTGCCACTGCTATCATGGCTAACAATCCCGGCCGGCCGATTCCGTCGATAAAGGTCAAATCATTTAAAACAAAAGCTGATGTAGATGTATGGCTATTTCGTAATCCTATGTACTGCCCTGGAGCTTTGCATTTTGTGGAAAGAAATGCCAGTGTTATTAGTTATGGCATACAGACCAACTCTACTCCTCTTGCAAAACAAGGGCAATTTGAGGATCCCACATTCAAGTTTCAAATTCCCCTTCAGATTGCTGCAGAGCGAGAAATTGCTAGGTCTTTGATTGGAGTTCCAAACTTCAGCTGGGTTGTTGCGCTAAAAGAATTTGCACACCCTTCAAGGGAGATTCCGTCTGCATTGCAGACAGTAGGACCAACCTTCTTTCTTGCAACTTCCATGTTTGGTTTTGTGTTTCAAATGAGTTCTTTGATCACAGAAAAAGAACTAAAGCTTCGACAGGCAATGACAATTATGGGTCTTTATGACTCTGCATATTGGTTCTCATGGCTCACATGGGAGGGAATCATTACACTTCTCTCATCACTTTTCATCACTCTGTTTGGAATGATATTTCAGTTTGATATGTTCCTGAAAAACAATTTTGCGATTGGTTTTGCCTTTATGTTATCGGCATTCATAAGCAAGTCGTCTTCATCAACAACTGTGGGTTTCTCCATATATATTGTTGGATCTGTCACCCAGGCAAGCATCCTCAGGTTTGAAATTTATAGATTAGGGGTTATTGGCTCAATGGTAATAACAGAACCCATTTTTTCATCGCAGATTGTCACAGCCGCTGGATTTCCCTACAGCCAAAACATCCGCAAAAGGTATAGAATAATATGGTCATTATTCCCGCCAAACCTTCTTGCCAAAGCTCTAGAGATACTCTCTAGTGCAACATCTCCCCCTTATGATATGGGCATAAAATGGAGTGGAATAACAAAGTGTCCACCAAATGAAACGGACTGCGTTATAACAATTAGTGACATTTTTAAATGGCTGGCGGCAACATTCTTTCTCTGGTTTGTATTGGCTATCTACTTCGATAATATCATCCCAAATGTATCTGGTGTCAGAAAATCAGTTTTTTACTTTTTAAATCCTGGGTACTGGCTAGGGAAGGGTGGAAAAGTGGAAGAGGGTGGCATTTGCAGTTGCATAGGTTCAGTTCCAGAACAGGAGCCACTTACTCCAGATGATGAAGATGTACTTGAAGAAGAGAACATCGTAAAACAACAAACCAGCGAGGGCATAGTTGATCCAAATATTGCTGTTCAGGTACGTGGCCTCTCAAAATCATATCCAGGGACCACAAAAATTGGTTGCTGTAGATGCAAGAGCACGTCACCTTACCATGCTCTGAAGGGCCTATGGGTGAATTTTTCCAAGAATCAGCTATTTTGTTTACTTGGGCCAAATGGAGCTGGGAAGACTACCACAATCAATTGTTTGACTGGCATCACACCCGTTACTGGCGGAGATGCATTGATTTATGGGAACTCTGTCCGAAGCTCTGTTGGCATGGCTAAAATTCGGCAAATTATAGGAGTTTGTCCGCAGTTTGATATTCTTTGGGATGCATTGTCTGGGCAAGAGCACCTCCACCTGTTTGCTAGTATTAAAGGCCTATCCCCAGCTTCAATAAAAGTGGTTGCTCAGAAGTCATTGGTAGAAGTAAGACTCACCGAGGCAGCTAAAATTAGAGCTGGGAGTTACAGTGGAGGAATGAAACGTCGTTTAAGTGTGGCAATAGCCCTTATTGGTGATCCAAAGTTAGTCATCTTAGATGAACCGACAACTGGTATGGATCCAATAACTAGAAGACATGTGTGGGACATCATTGAGGATGCAAAAAAGGGGCGTGCAATTGTCCTAACCACTCACTCAATGGAAGAAGCTGACATTTTAAGTGATAGGATAGGAATAATGGCAAAGGGTAGGCTCCGTTGCATTGGTACTTCAATCAGACTGAAATCACGGTTTGGTACTGGCTTTATTGCTACTGTTAGTTTCAGTGAAAGCACCAATGGACAAAGCCCTCCACATGGGGATGCATTTACTACACCTCACCATGAGGCAGTGAAGCAGTTCTTTAAATATCATTTGGATGTTTTACCAAAAGAAGAGAACAAAGCCTTTCTGACTTTTGTTATTCCTCATGACAGAGAGGCACTTCTGACGAAATTTTTTAAGGAGCTTCAAGATAGAGAAATTGAGTTTGGTATCTCAGACATCCAACTGGGTCTTACAACTCTTGAAGAAGTTTTCTTGAATATCGCAAGGCAGGCAGAGCTAGAAACTGCTACGGCTGAGGGGAGGTTGGTCACTCTCACATTAACATCTGGAGCCTTAATTGAGATCCCTGTAGGAGCTAGGTTTGTTGGGATTCCAGGTACAGAATCCACAGAAAATCCAAGAGGAGTTATGGTAGAAGTTTACTGGGTGCAAGATGATTCCGGTTCCCTCTGCATTTCAGGCCACTCACCTGAAACTCCAATACCTCCAAATGTTGAACCAATGCCTTCCTTGGCACCTACTTCACGCCGAAGTCTGTTACCAGTTCATGGAGTTGTTATCGACCCTGATCAAATCAGTAATACCACCTCTCATTGA

Protein Analysis

989

Amino Acids

109.44

Weight (kDa)

8.65

Isoelectric Point (pI)

40.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC2_membrane_3 PF12698 235 - 466 2.3e-09 ABC-2 family transporter protein
ABC_tran PF00005 574 - 719 3.9e-24 ABC transporter
AAA_21 PF13304 674 - 751 2.2e-09 AAA domain, putative AbiEii toxin, Type IV TA system
ABCA11_C PF25158 874 - 928 8.2e-31 ABC transporter A family member 11-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1331
AccB1I GGYRCC 1 cut(s) 2887
AccB7I CCANNNNNTGG 2 cut(s) 256, 2921
AccBSI CCGCTC 2 cut(s) 57, 330
AccIII TCCGGA 1 cut(s) 96
AcoI YGGCCR 2 cut(s) 388, 392
AcsI RAATTY 6 cut(s) 591, 677, 1077, 1735, 1887, 2540
AcuI CTGAAG 3 cut(s) 584, 637, 1739
AfaI GTAC 8 cut(s) 293, 470, 1466, 1566, 1638, 2314, 2344, 2752
AfiI CCNNNNNNNGG 6 cut(s) 256, 694, 1829, 2156, 2402, 2921
AflIII ACRYGT 1 cut(s) 2182
AjiI CACGTC 1 cut(s) 1701
AjnI CCWGG 6 cut(s) 105, 475, 1053, 1459, 1660, 2746
AjuI GAANNNNNNNTTGG 2 cut(s) 2559, 2591
Alw21I GWGCWC 3 cut(s) 114, 1700, 1956
AlwNI CAGNNNCTG 2 cut(s) 256, 1151
Aor13HI TCCGGA 1 cut(s) 96
AoxI GGCC 8 cut(s) 195, 388, 392, 1642, 1723, 1769, 1981, 2833
ApeKI GCWGC 2 cut(s) 608, 2048
ApoI RAATTY 6 cut(s) 591, 677, 1077, 1735, 1887, 2540
Asp700I GAANNNNTTC 1 cut(s) 2444
AspA2I CCTAGG 1 cut(s) 344
AspLEI GCGC 2 cut(s) 265, 670
AspS9I GGNCC 4 cut(s) 725, 1665, 1723, 1769
AsuC2I CCSGG 1 cut(s) 387
AsuHPI GGTGA 8 cut(s) 232, 1042, 1695, 1744, 2032, 2132, 2417, 2832
AvaII GGWCC 2 cut(s) 725, 1665
AvrII CCTAGG 1 cut(s) 344
AxyI CCTNAGG 1 cut(s) 1067
BamHI GGATCC 2 cut(s) 571, 2164
BanI GGYRCC 1 cut(s) 2887
BbsI GAAGAC 4 cut(s) 163, 996, 1793, 2185
Bbv12I GWGCWC 3 cut(s) 114, 1700, 1956
BbvCI CCTCAGC 1 cut(s) 2667
BbvI GCAGC 2 cut(s) 595, 2060
BccI CCATC 1 cut(s) 196
BceAI ACGGC 1 cut(s) 2679
BciT130I CCWGG 6 cut(s) 107, 477, 1055, 1461, 1662, 2748
BciVI GTATCC 1 cut(s) 197
BclI TGATCA 2 cut(s) 783, 2941
BcnI CCSGG 1 cut(s) 387
BfaI CTAG 9 cut(s) 345, 627, 1235, 1248, 1472, 1971, 2175, 2651, 2730
BfmI CTRYAG 4 cut(s) 609, 1162, 1684, 2721
BfuI GTATCC 1 cut(s) 197
BglI GCCNNNNNGGC 1 cut(s) 203
BisI GCNGC 6 cut(s) 132, 266, 609, 1149, 1362, 2049
BlnI CCTAGG 1 cut(s) 344
BlsI GCNGC 6 cut(s) 133, 267, 610, 1150, 1363, 2050
BmcAI AGTACT 1 cut(s) 293
Bme1390I CCNGG 7 cut(s) 107, 387, 477, 1055, 1461, 1662, 2748
Bme18I GGWCC 2 cut(s) 725, 1665
BmgBI CACGTC 1 cut(s) 1701
BmgT120I GGNCC 4 cut(s) 725, 1665, 1723, 1769
BmiI GGNNCC 8 cut(s) 573, 1539, 1666, 2166, 2300, 2704, 2818, 2889
BmrFI CCNGG 7 cut(s) 107, 387, 477, 1055, 1461, 1662, 2748
BmrI ACTGGG 2 cut(s) 2606, 2806
BmsI GCATC 7 cut(s) 1071, 1679, 1824, 1828, 1924, 2194, 2398
BmuI ACTGGG 2 cut(s) 2606, 2806
BoxI GACNNNNGTC 1 cut(s) 140
BpiI GAAGAC 4 cut(s) 163, 996, 1793, 2185
BplI GAGNNNNNCTC 2 cut(s) 1229, 1261
BpmI CTGGAG 3 cut(s) 498, 1533, 2721
Bpu10I CCTNAGC 1 cut(s) 2667
BpuMI CCSGG 1 cut(s) 387
BsaAI YACGTR 1 cut(s) 1640
BsaJI CCNNGG 8 cut(s) 42, 344, 475, 1053, 1460, 1661, 2043, 2883
BsaWI WCCGGW 2 cut(s) 96, 2813
BsaXI ACNNNNNCTCC 6 cut(s) 689, 719, 2059, 2089, 2769, 2799
Bsc4I CCNNNNNNNGG 6 cut(s) 256, 694, 1829, 2156, 2402, 2921
Bse118I RCCGGY 1 cut(s) 390
Bse1I ACTGG 9 cut(s) 507, 1472, 1816, 1834, 2161, 2350, 2601, 2801, 2915
Bse21I CCTNAGG 1 cut(s) 1067
Bse3DI GCAATG 4 cut(s) 65, 357, 710, 822
BseAI TCCGGA 1 cut(s) 96
BseBI CCWGG 6 cut(s) 107, 477, 1055, 1461, 1662, 2748
BseDI CCNNGG 8 cut(s) 42, 344, 475, 1053, 1460, 1661, 2043, 2883
BseGI GGATG 9 cut(s) 297, 1062, 1173, 1410, 1939, 2209, 2413, 2470, 2589
BseLI CCNNNNNNNGG 6 cut(s) 256, 694, 1829, 2156, 2402, 2921
BseMI GCAATG 4 cut(s) 65, 357, 710, 822
BseMII CTCAG 5 cut(s) 27, 1081, 2027, 2598, 2658
BseNI ACTGG 9 cut(s) 507, 1472, 1816, 1834, 2161, 2350, 2601, 2801, 2915
BseRI GAGGAG 4 cut(s) 167, 208, 534, 2790
BseX3I CGGCCG 2 cut(s) 388, 392
BseXI GCAGC 2 cut(s) 595, 2060
BseYI CCCAGC 5 cut(s) 249, 657, 1781, 1990, 2063
Bsh1285I CGRYCG 2 cut(s) 391, 395
BshFI GGCC 8 cut(s) 197, 390, 394, 1644, 1725, 1771, 1983, 2835
BshNI GGYRCC 1 cut(s) 2887
BsiEI CGRYCG 2 cut(s) 391, 395
BsiHKAI GWGCWC 3 cut(s) 114, 1700, 1956
BsiSI CCGG 4 cut(s) 97, 387, 391, 2814
BslFI GGGAC 3 cut(s) 47, 1678, 2204
BslI CCNNNNNNNGG 6 cut(s) 256, 694, 1829, 2156, 2402, 2921
BsmFI GGGAC 3 cut(s) 47, 1678, 2204
BsmI GAATGC 1 cut(s) 986
BsnI GGCC 8 cut(s) 197, 390, 394, 1644, 1725, 1771, 1983, 2835
Bsp1286I GDGCHC 3 cut(s) 114, 1700, 1956
Bsp13I TCCGGA 1 cut(s) 96
Bsp19I CCATGG 1 cut(s) 42
BspANI GGCC 8 cut(s) 197, 390, 394, 1644, 1725, 1771, 1983, 2835
BspCNI CTCAG 5 cut(s) 26, 1080, 2026, 2597, 2659
BspEI TCCGGA 1 cut(s) 96
BspHI TCATGA 1 cut(s) 2515
BspLI GGNNCC 8 cut(s) 573, 1539, 1666, 2166, 2300, 2704, 2818, 2889
BspMAI CTGCAG 1 cut(s) 613
BspT107I GGYRCC 1 cut(s) 2887
BsrBI CCGCTC 2 cut(s) 57, 330
BsrDI GCAATG 4 cut(s) 65, 357, 710, 822
BsrFI RCCGGY 1 cut(s) 390
BsrI ACTGG 9 cut(s) 507, 1472, 1816, 1834, 2161, 2350, 2601, 2801, 2915
BssAI RCCGGY 1 cut(s) 390
BssECI CCNNGG 8 cut(s) 42, 344, 475, 1053, 1460, 1661, 2043, 2883
BssT1I CCWWGG 3 cut(s) 42, 344, 2883
Bst2UI CCWGG 6 cut(s) 107, 477, 1055, 1461, 1662, 2748
Bst4CI ACNGT 5 cut(s) 721, 1018, 2075, 2337, 2362
Bst6I CTCTTC 5 cut(s) 155, 185, 1488, 1569, 2475
BstBAI YACGTR 1 cut(s) 1640
BstC8I GCNNGC 6 cut(s) 114, 392, 1060, 1359, 2220, 2643
BstDEI CTNAG 6 cut(s) 13, 1067, 2013, 2140, 2584, 2667
BstDSI CCRYGG 1 cut(s) 42
BstF5I GGATG 9 cut(s) 297, 1062, 1173, 1410, 1939, 2209, 2413, 2470, 2589
BstHHI GCGC 2 cut(s) 265, 670
BstMCI CGRYCG 2 cut(s) 391, 395
BstNI CCWGG 6 cut(s) 107, 477, 1055, 1461, 1662, 2748
BstNSI RCATGY 1 cut(s) 2186
BstPAI GACNNNNGTC 1 cut(s) 140
BstSCI CCNGG 7 cut(s) 105, 385, 475, 1053, 1459, 1660, 2746
BstSFI CTRYAG 4 cut(s) 609, 1162, 1684, 2721
BstV1I GCAGC 2 cut(s) 595, 2060
BstV2I GAAGAC 4 cut(s) 163, 996, 1793, 2185
BstX2I RGATCY 4 cut(s) 571, 1043, 2164, 2715
BstYI RGATCY 4 cut(s) 571, 1043, 2164, 2715
BstZI CGGCCG 2 cut(s) 388, 392
Bsu36I CCTNAGG 1 cut(s) 1067
BsuI GTATCC 1 cut(s) 197
BsuRI GGCC 8 cut(s) 197, 390, 394, 1644, 1725, 1771, 1983, 2835
BtgI CCRYGG 1 cut(s) 42
BtgZI GCGATG 1 cut(s) 1116
BtrI CACGTC 1 cut(s) 1701
BtsCI GGATG 9 cut(s) 297, 1062, 1173, 1410, 1939, 2209, 2413, 2470, 2589
BtsI GCAGTG 2 cut(s) 363, 2442
BtsIMutI CAGTG 5 cut(s) 363, 514, 2080, 2377, 2442
Cac8I GCNNGC 6 cut(s) 114, 392, 1060, 1359, 2220, 2643
CaiI CAGNNNCTG 2 cut(s) 256, 1151
CciI TCATGA 1 cut(s) 2515
CfoI GCGC 2 cut(s) 265, 670
Cfr10I RCCGGY 1 cut(s) 390
Cfr13I GGNCC 4 cut(s) 725, 1665, 1723, 1769
CseI GACGC 1 cut(s) 226
CsiI ACCWGGT 1 cut(s) 105
Csp6I GTAC 8 cut(s) 292, 469, 1465, 1565, 1637, 2313, 2343, 2751
CspCI CAANNNNNGTGG 6 cut(s) 999, 1034, 1657, 1692, 1986, 2021
CviQI GTAC 8 cut(s) 292, 469, 1465, 1565, 1637, 2313, 2343, 2751
DdeI CTNAG 6 cut(s) 13, 1067, 2013, 2140, 2584, 2667
DraI TTTAAA 4 cut(s) 424, 1351, 1455, 2452
EaeI YGGCCR 2 cut(s) 388, 392
EagI CGGCCG 2 cut(s) 388, 392
Eam1104I CTCTTC 5 cut(s) 155, 185, 1488, 1569, 2475
EarI CTCTTC 5 cut(s) 155, 185, 1488, 1569, 2475
EciI GGCGGA 3 cut(s) 28, 136, 1848
EclXI CGGCCG 2 cut(s) 388, 392
Eco130I CCWWGG 3 cut(s) 42, 344, 2883
Eco147I AGGCCT 1 cut(s) 1983
Eco47I GGWCC 2 cut(s) 725, 1665
Eco52I CGGCCG 2 cut(s) 388, 392
Eco57I CTGAAG 3 cut(s) 584, 637, 1739
Eco81I CCTNAGG 1 cut(s) 1067
EcoO109I RGGNCCY 1 cut(s) 1723
EcoRII CCWGG 6 cut(s) 105, 475, 1053, 1459, 1660, 2746
EcoT14I CCWWGG 3 cut(s) 42, 344, 2883
EcoT22I ATGCAT 3 cut(s) 1843, 1939, 2413
ErhI CCWWGG 3 cut(s) 42, 344, 2883
FalI AAGNNNNNCTT 6 cut(s) 296, 328, 1551, 1583, 2432, 2464
FaqI GGGAC 3 cut(s) 47, 1678, 2204
FauI CCCGC 1 cut(s) 1218
FbaI TGATCA 2 cut(s) 783, 2941
Fnu4HI GCNGC 6 cut(s) 132, 266, 609, 1149, 1362, 2049
FokI GGATG 9 cut(s) 284, 1049, 1160, 1397, 1946, 2216, 2420, 2477, 2576
FseI GGCCGGCC 1 cut(s) 394
Fsp4HI GCNGC 6 cut(s) 132, 266, 609, 1149, 1362, 2049
FspBI CTAG 9 cut(s) 345, 627, 1235, 1248, 1472, 1971, 2175, 2651, 2730
GlaI GCGC 2 cut(s) 264, 669
GluI GCNGC 6 cut(s) 132, 266, 609, 1149, 1362, 2049
GsaI CCCAGC 5 cut(s) 253, 661, 1785, 1994, 2067
GsuI CTGGAG 3 cut(s) 498, 1533, 2721
HaeIII GGCC 8 cut(s) 197, 390, 394, 1644, 1725, 1771, 1983, 2835
HapII CCGG 4 cut(s) 97, 387, 391, 2814
HgaI GACGC 1 cut(s) 226
HhaI GCGC 2 cut(s) 265, 670
Hin6I GCGC 2 cut(s) 263, 668
HinP1I GCGC 2 cut(s) 263, 668
HindIII AAGCTT 1 cut(s) 803
HpaII CCGG 4 cut(s) 97, 387, 391, 2814
HphI GGTGA 8 cut(s) 232, 1042, 1695, 1744, 2032, 2132, 2417, 2832
Hpy166II GTNNAC 3 cut(s) 1307, 1763, 2794
Hpy8I GTNNAC 3 cut(s) 1307, 1763, 2794
Hpy99I CGWCG 3 cut(s) 139, 406, 2094
HpyAV CCTTC 9 cut(s) 121, 187, 608, 699, 742, 1229, 1471, 1714, 2889
HpyCH4III ACNGT 5 cut(s) 721, 1018, 2075, 2337, 2362
HpyCH4IV ACGT 4 cut(s) 137, 1639, 1700, 2089
HpyF3I CTNAG 6 cut(s) 13, 1067, 2013, 2140, 2584, 2667
HpySE526I ACGT 4 cut(s) 137, 1639, 1700, 2089
HspAI GCGC 2 cut(s) 263, 668
Kpn2I TCCGGA 1 cut(s) 96
KroI GCCGGC 1 cut(s) 390
KroNI GCCGGC 1 cut(s) 392
Ksp22I TGATCA 2 cut(s) 783, 2941
LmnI GCTCC 9 cut(s) 327, 354, 479, 1537, 1778, 2304, 2551, 2702, 2726
Lsp1109I GCAGC 2 cut(s) 595, 2060
LweI GCATC 7 cut(s) 1071, 1679, 1824, 1828, 1924, 2194, 2398
MabI ACCWGGT 1 cut(s) 105
MaeI CTAG 9 cut(s) 345, 627, 1235, 1248, 1472, 1971, 2175, 2651, 2730
MaeII ACGT 4 cut(s) 137, 1639, 1700, 2089
MaeIII GTNAC 9 cut(s) 238, 1048, 1141, 1340, 1701, 1825, 2069, 2680, 2910
MbiI CCGCTC 2 cut(s) 57, 330
MfeI CAATTG 2 cut(s) 1801, 2223
MflI RGATCY 4 cut(s) 571, 1043, 2164, 2715
MhlI GDGCHC 3 cut(s) 114, 1700, 1956
MlyI GAGTC 4 cut(s) 3, 69, 833, 2031
MmeI TCCRAC 3 cut(s) 169, 1021, 2617
Mph1103I ATGCAT 3 cut(s) 1843, 1939, 2413
MroI TCCGGA 1 cut(s) 96
MroNI GCCGGC 1 cut(s) 390
MroXI GAANNNNTTC 1 cut(s) 2444
MslI CAYNNNNRTG 2 cut(s) 2406, 2463
MspA1I CMGCKG 2 cut(s) 657, 1151
MspI CCGG 4 cut(s) 97, 387, 391, 2814
MspR9I CCNGG 7 cut(s) 107, 387, 477, 1055, 1461, 1662, 2748
MunI CAATTG 2 cut(s) 1801, 2223
Mva1269I GAATGC 1 cut(s) 986
MvaI CCWGG 6 cut(s) 107, 477, 1055, 1461, 1662, 2748
NaeI GCCGGC 1 cut(s) 392
NciI CCSGG 1 cut(s) 387
NcoI CCATGG 1 cut(s) 42
NgoMIV GCCGGC 1 cut(s) 390
NlaIV GGNNCC 8 cut(s) 573, 1539, 1666, 2166, 2300, 2704, 2818, 2889
NmuCI GTSAC 6 cut(s) 238, 1048, 1141, 1340, 1701, 2680
NsiI ATGCAT 3 cut(s) 1843, 1939, 2413
NspI RCATGY 1 cut(s) 2186
PagI TCATGA 1 cut(s) 2515
PceI AGGCCT 1 cut(s) 1983
PciI ACATGT 1 cut(s) 2182
PctI GAATGC 1 cut(s) 986
PdiI GCCGGC 1 cut(s) 392
PdmI GAANNNNTTC 1 cut(s) 2444
PflMI CCANNNNNTGG 2 cut(s) 256, 2921
PkrI GCNGC 6 cut(s) 133, 267, 610, 1150, 1363, 2050
PleI GAGTC 4 cut(s) 3, 68, 833, 2031
PpsI GAGTC 4 cut(s) 3, 68, 833, 2031
Ppu21I YACGTR 1 cut(s) 1640
PscI ACATGT 1 cut(s) 2182
PshAI GACNNNNGTC 1 cut(s) 140
PsiI TTATAA 1 cut(s) 1331
Psp6I CCWGG 6 cut(s) 105, 475, 1053, 1459, 1660, 2746
PspFI CCCAGC 5 cut(s) 249, 657, 1781, 1990, 2063
PspGI CCWGG 6 cut(s) 105, 475, 1053, 1459, 1660, 2746
PspN4I GGNNCC 8 cut(s) 573, 1539, 1666, 2166, 2300, 2704, 2818, 2889
PspPI GGNCC 4 cut(s) 725, 1665, 1723, 1769
PstI CTGCAG 1 cut(s) 613
PstNI CAGNNNCTG 2 cut(s) 256, 1151
PsuI RGATCY 4 cut(s) 571, 1043, 2164, 2715
PvuII CAGCTG 1 cut(s) 657
RigI GGCCGGCC 1 cut(s) 394
RsaI GTAC 8 cut(s) 293, 470, 1466, 1566, 1638, 2314, 2344, 2752
RsaNI GTAC 8 cut(s) 292, 469, 1465, 1565, 1637, 2313, 2343, 2751
RseI CAYNNNNRTG 2 cut(s) 2406, 2463
SatI GCNGC 6 cut(s) 132, 266, 609, 1149, 1362, 2049
Sau96I GGNCC 4 cut(s) 725, 1665, 1723, 1769
ScaI AGTACT 1 cut(s) 293
SchI GAGTC 4 cut(s) 3, 69, 833, 2031
ScrFI CCNGG 7 cut(s) 107, 387, 477, 1055, 1461, 1662, 2748
SduI GDGCHC 3 cut(s) 114, 1700, 1956
SexAI ACCWGGT 1 cut(s) 105
SfaNI GCATC 7 cut(s) 1071, 1679, 1824, 1828, 1924, 2194, 2398
SfcI CTRYAG 4 cut(s) 609, 1162, 1684, 2721
SinI GGWCC 2 cut(s) 725, 1665
SmiMI CAYNNNNRTG 2 cut(s) 2406, 2463
SseBI AGGCCT 1 cut(s) 1983
SspI AATATT 1 cut(s) 1624
SspMI CTAG 9 cut(s) 345, 627, 1235, 1248, 1472, 1971, 2175, 2651, 2730
StuI AGGCCT 1 cut(s) 1983
StyD4I CCNGG 7 cut(s) 105, 385, 475, 1053, 1459, 1660, 2746
StyI CCWWGG 3 cut(s) 42, 344, 2883
TaaI ACNGT 5 cut(s) 721, 1018, 2075, 2337, 2362
TaiI ACGT 4 cut(s) 140, 1642, 1703, 2092
TaqI TCGA 5 cut(s) 208, 404, 808, 1401, 2934
TatI WGTACW 3 cut(s) 291, 468, 1564
TauI GCSGC 4 cut(s) 134, 268, 1151, 1364
TscAI CASTG 5 cut(s) 370, 514, 2080, 2377, 2442
TseFI GTSAC 6 cut(s) 238, 1048, 1141, 1340, 1701, 2680
TseI GCWGC 2 cut(s) 608, 2048
Tsp45I GTSAC 6 cut(s) 238, 1048, 1141, 1340, 1701, 2680
TspDTI ATGAA 9 cut(s) 892, 979, 996, 1119, 1329, 1572, 2099, 2160, 2909
TspGWI ACGGA 4 cut(s) 390, 693, 1334, 2291
TspRI CASTG 5 cut(s) 370, 514, 2080, 2377, 2442
Van91I CCANNNNNTGG 2 cut(s) 256, 2921
VpaK11BI GGWCC 2 cut(s) 725, 1665
XapI RAATTY 6 cut(s) 591, 677, 1077, 1735, 1887, 2540
XbaI TCTAGA 1 cut(s) 1234
XceI RCATGY 1 cut(s) 2186
XcmI CCANNNNNNNNNTGG 3 cut(s) 370, 654, 2242
XmaJI CCTAGG 1 cut(s) 344
XmnI GAANNNNTTC 1 cut(s) 2444
XspI CTAG 9 cut(s) 345, 627, 1235, 1248, 1472, 1971, 2175, 2651, 2730
ZrmI AGTACT 1 cut(s) 293
Zsp2I ATGCAT 3 cut(s) 1843, 1939, 2413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.