Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0000771

Physical Location & Seq

Genomic Coordinates Reverse (-)

66141924 .. 66147165

Gene Structure 5242 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00274500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGACGCTTTGTTCAGATTCAAGCTTTAGCTGGGTTGTTGCATTCAAGGAATTTGCACATCCTGCAATGGAGAGGCCTTCTGCAATGGATAACATAGGACCAAGGTTTTTTTTCGCAGCTGCCATGTTTGGTTTTGTCTTTCAAATGACTTCCTTGATCACAGAGAAAGAACTTAAGCTGCGACAGGCAATGACAATGATGGGCCTTTATGATAGTGCATACTGGTTCTCATGGCTTGCTTGGGAGGGAATTATTACACTACTCTCAGCTCTTTTCACACCGGCTACATCAAACAACTATCCATACAATAAAAGCATTTCTAGGACTAAGCGAAACTTGTGGTCTCTATTTCCACCTAAACTTCTTTCCCAGGCTCTATATATACTCAGTGAGGCGACATCCACTCCTAAAAAGGCTGGCATTAGCTGGAGTAGAAGGGCAAACTGCGGACCAGGGGATGAAAATTGTGTTATAACAATTAGTGGCATTTGTAGTTGCATAGGTTCACTTCCACCACTGGAGCATATTACTCCAGAAGATGAAGATGTCCTTGAAGAGGAGAACATTGTTAAAGAGCAAACTAAGGGAGGCACAGTTGGTCCAAACCTTGCAGTTCAGATACGTGGCCTTGTAAAAACATATCCCGGCAAAAGGCATGGTTGCTGTTGTAGCAAGAGGACGTCACCATACCATGCTCTCAAGTTTGATATTCTTTGGGATGCATTGTCTGGGCAAGAGCATCTCCACATATTCGCTAGTATCAAAGGCCTTCCTCCAGCATCAACAAAATTGGCTACTATGAAGTCACTGGAAGAGGTGAAACTGACTGATGCAGCCAAAATGAGAGCTGGTAGTTACAGTGGAGGAATGAAGCGTCGCTTGAGTGTTGCAATAGCCCTTATTGGTGATCCGAAGTTAGTTATCCTAGATGAACCGGTTTATGATCTGCAGACAACTGGTATGGATCCAATATCTAGAAGGCATGTATGGGACATCATAGAGGATGCAAAGAAAGGTCGTGCAATCGTCCTGACCACTCACTCAATGGAAGAAGCTGACATATTAGGTGACCGGATAGGAATTATGGCAAAGGGTAGGCTCCGCTGCATTGGAACTTCAATCAGGCTGAAGTCACGATTTGGGACTGGTTTCATTGCTAATGTGAGATTCAAAGAAAGCAGAAATGGGGATGAAGTTGCAACATCTCATCACGAAGCTGTGAAGCAGTTATTTAAATATAAATTTTTCGCGGAACTTCAAGATCAAGAAGATGAATTTGGCATAGCAGACATTCAACTTGGACTTGCAACTCTTGAAGAAGTTTTCCTAAATATCGCAAGGCGGGCAGAGCTAGAAAGTGCCACAGCTGAGGGGAGGTTGGTTACTCTCACTTTAACATCTGGGGTTTTGGTTCAGATGCCTACCGGAGCTAGGTTTGTTGGGATTCCGGGAACAGTCTCTTCTGAAAATCCAAACGGGCTTATGGTAGAAGTTTTTTGGGAGCAAGATGAATCTGGTGCCCTCTGCATCTCTGACCACTCACCTGAAACCCCAATACCTCCTAATATTGTAGTTGAACTAATGCCACCTTCAATTTCGCCGCGAAATTTGTTTGGCCGTTCCAAACCAGTAAACGGCATTGTGCTAGACTCGGACCACATCACTAGTTCTTTTGGTCCGAGTGGTCATAGGGGTAGTTGGCAAAGGATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006869 GO:0008150 GO:0010876 GO:0015399 GO:0015405 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0033036 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane_3 ABC_tran

Protein Analysis

570

Amino Acids

62.85

Weight (kDa)

6.69

Isoelectric Point (pI)

46.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC2_membrane_3	PF12698	36 - 95	7.1e-08	ABC-2 family transporter protein
AAA_21	PF13304	261 - 351	9.7e-06	AAA domain, putative AbiEii toxin, Type IV TA system
ABC_tran	PF00005	267 - 313	6.8e-08	ABC transporter
ABCA11_C	PF25158	441 - 495	7.2e-29	ABC transporter A family member 11-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47730 AT5G61690 AT5G61690 AT5G61730 AT5G61730
fragaria_vesca	FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_5g15280 FvH4_5g17010 FvH4_5g17010 FvH4_5g17010
malus_domestica	MD00G1160200.v1.1 MD11G1124700.v1.1
prunus_persica	Prupe.5G188400_v2.0.a1 Prupe.5G229500_v2.0.a1 Prupe.6G093200_v2.0.a1 Prupe.6G093200_v2.0.a1
pyrus_communis	pycom06g19960 pycom11g10520
rosa_chinensis	RchiOBHm_Chr5g0061021 RchiOBHm_Chr7g0178841 RchiOBHm_Chr7g0180781
rosa_laevigata	RLG00000005230 RLG00000005399 RLG00000005401 RLG00000005403 RLG00000005405 RLG00000035420
rosa_multiflora	Rmu_co8148594.1_g000001 Rmu_co8316781.1_g000001 Rmu_co8482325.1_g000001 Rmu_co8514565.1_g000001 Rmu_sc0000888.1_g000001 Rmu_sc0007457.1_g000010 Rmu_sc0026332.1_g000001 Rmu_ssc0000131.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019630 Rroxscaffold_3G00272530 Rroxscaffold_3G00274500
rosa_rugosa	Rorug01G0114900 Rorug01G0115000 Rorug05G0336100 Rorug06G0420200 Rorug06G0420200 Rorug06G0420300 Rorug06G0420300 Rorug06G0436000
rosa_samantha	Rh1BG106800 Rh5AG398400 Rh5BG411300 Rh5CG436300 Rh5DG425700 Rh7AG019700 Rh7AG037700 Rh7BG019100 Rh7BG037400 Rh7CG019800 Rh7CG039100 Rh7DG019700
rosa_wichuraiana	Rw5G037560 Rw7G001590 Rw7G003110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	473
AatII	GACGTC	1 cut(s)	683
AccB1I	GGYRCC	1 cut(s)	1517
AccII	CGCG	2 cut(s)	1250, 1603
AciI	CCGC	5 cut(s)	447, 1102, 1250, 1342, 1601
AclWI	GGATC	3 cut(s)	902, 959, 972
AcoI	YGGCCR	1 cut(s)	1615
AcsI	RAATTY	4 cut(s)	50, 1241, 1274, 1606
AcuI	CTGAAG	1 cut(s)	1148
AcyI	GRCGYC	1 cut(s)	680
AfiI	CCNNNNNNNGG	4 cut(s)	556, 651, 1431, 1634
AflII	CTTAAG	1 cut(s)	173
AgeI	ACCGGT	1 cut(s)	934
AhlI	ACTAGT	1 cut(s)	1664
AjnI	CCWGG	2 cut(s)	369, 451
AjuI	GAANNNNNNNTTGG	2 cut(s)	1260, 1292
Alw26I	GTCTC	2 cut(s)	348, 1462
AlwI	GGATC	3 cut(s)	902, 959, 972
AoxI	GGCC	5 cut(s)	74, 202, 625, 766, 1615
ApeKI	GCWGC	5 cut(s)	116, 119, 178, 833, 1104
ApoI	RAATTY	4 cut(s)	50, 1241, 1274, 1606
AsiGI	ACCGGT	1 cut(s)	934
AspS9I	GGNCC	6 cut(s)	98, 202, 449, 599, 1654, 1676
AsuC2I	CCSGG	2 cut(s)	645, 1449
AsuHPI	GGTGA	5 cut(s)	675, 829, 917, 1079, 1533
AvaII	GGWCC	5 cut(s)	98, 449, 599, 1654, 1676
BaeGI	GKGCMC	1 cut(s)	1522
BamHI	GGATCC	1 cut(s)	964
BanI	GGYRCC	1 cut(s)	1517
BbvCI	CCTCAGC	1 cut(s)	1368
BbvI	GCAGC	5 cut(s)	106, 128, 165, 845, 1091
BccI	CCATC	1 cut(s)	193
BceAI	ACGGC	2 cut(s)	1602, 1651
BciT130I	CCWGG	2 cut(s)	371, 453
BclI	TGATCA	1 cut(s)	156
BcnI	CCSGG	2 cut(s)	645, 1449
BcoDI	GTCTC	2 cut(s)	348, 1462
BcuI	ACTAGT	1 cut(s)	1664
BfaI	CTAG	8 cut(s)	321, 756, 926, 975, 1352, 1431, 1646, 1665
BfmI	CTRYAG	1 cut(s)	947
BfrI	CTTAAG	1 cut(s)	173
BisI	GCNGC	6 cut(s)	117, 120, 179, 834, 1105, 1601
BlsI	GCNGC	6 cut(s)	118, 121, 180, 835, 1106, 1602
Bme1390I	CCNGG	4 cut(s)	371, 453, 645, 1449
Bme18I	GGWCC	5 cut(s)	98, 449, 599, 1654, 1676
BmgT120I	GGNCC	6 cut(s)	98, 202, 449, 599, 1654, 1676
BmiI	GGNNCC	3 cut(s)	966, 1100, 1519
BmrFI	CCNGG	4 cut(s)	371, 453, 645, 1449
BmsI	GCATC	7 cut(s)	709, 748, 788, 820, 994, 1407, 1536
BpmI	CTGGAG	4 cut(s)	448, 516, 539, 759
Bpu10I	CCTNAGC	1 cut(s)	1368
BpuEI	CTTGAG	2 cut(s)	683, 901
BpuMI	CCSGG	2 cut(s)	645, 1449
BsaAI	YACGTR	1 cut(s)	623
BsaHI	GRCGYC	1 cut(s)	680
BsaI	GGTCTC	1 cut(s)	348
BsaJI	CCNNGG	3 cut(s)	101, 369, 452
BsaWI	WCCGGW	3 cut(s)	934, 1071, 1424
BsaXI	ACNNNNNCTCC	4 cut(s)	388, 418, 579, 609
Bsc4I	CCNNNNNNNGG	4 cut(s)	556, 651, 1431, 1634
Bse118I	RCCGGY	2 cut(s)	280, 934
Bse1I	ACTGG	6 cut(s)	227, 522, 813, 961, 1150, 1628
Bse3DI	GCAATG	4 cut(s)	72, 90, 195, 1152
BseBI	CCWGG	2 cut(s)	371, 453
BseDI	CCNNGG	3 cut(s)	101, 369, 452
BseGI	GGATG	6 cut(s)	58, 398, 463, 724, 1009, 1195
BseLI	CCNNNNNNNGG	4 cut(s)	556, 651, 1431, 1634
BseMI	GCAATG	4 cut(s)	72, 90, 195, 1152
BseMII	CTCAG	3 cut(s)	279, 400, 1359
BseNI	ACTGG	6 cut(s)	227, 522, 813, 961, 1150, 1628
BseRI	GAGGAG	1 cut(s)	572
BseSI	GKGCMC	1 cut(s)	1522
BseXI	GCAGC	5 cut(s)	106, 128, 165, 845, 1091
BseYI	CCCAGC	1 cut(s)	30
Bsh1236I	CGCG	2 cut(s)	1250, 1603
BshFI	GGCC	5 cut(s)	76, 204, 627, 768, 1617
BshNI	GGYRCC	1 cut(s)	1517
BshTI	ACCGGT	1 cut(s)	934
BsiSI	CCGG	6 cut(s)	281, 645, 935, 1072, 1425, 1448
BslFI	GGGAC	2 cut(s)	1004, 1156
BslI	CCNNNNNNNGG	4 cut(s)	556, 651, 1431, 1634
BsmAI	GTCTC	2 cut(s)	348, 1462
BsmFI	GGGAC	2 cut(s)	1004, 1156
BsmI	GAATGC	1 cut(s)	41
BsnI	GGCC	5 cut(s)	76, 204, 627, 768, 1617
Bso31I	GGTCTC	1 cut(s)	348
Bsp1286I	GDGCHC	1 cut(s)	1522
Bsp143I	GATC	6 cut(s)	156, 907, 943, 964, 1261, 1707
BspACI	CCGC	5 cut(s)	447, 1102, 1250, 1342, 1601
BspANI	GGCC	5 cut(s)	76, 204, 627, 768, 1617
BspCNI	CTCAG	3 cut(s)	278, 399, 1360
BspFNI	CGCG	2 cut(s)	1250, 1603
BspLI	GGNNCC	3 cut(s)	966, 1100, 1519
BspMAI	CTGCAG	1 cut(s)	951
BspPI	GGATC	3 cut(s)	902, 959, 972
BspT107I	GGYRCC	1 cut(s)	1517
BspTI	CTTAAG	1 cut(s)	173
BspTNI	GGTCTC	1 cut(s)	348
BsrDI	GCAATG	4 cut(s)	72, 90, 195, 1152
BsrFI	RCCGGY	2 cut(s)	280, 934
BsrI	ACTGG	6 cut(s)	227, 522, 813, 961, 1150, 1628
BssAI	RCCGGY	2 cut(s)	280, 934
BssECI	CCNNGG	3 cut(s)	101, 369, 452
BssMI	GATC	6 cut(s)	156, 907, 943, 964, 1261, 1707
BssNI	GRCGYC	1 cut(s)	680
BssT1I	CCWWGG	1 cut(s)	101
Bst2UI	CCWGG	2 cut(s)	371, 453
Bst4CI	ACNGT	3 cut(s)	595, 860, 1456
Bst6I	CTCTTC	3 cut(s)	549, 807, 1465
BstACI	GRCGYC	1 cut(s)	680
BstAFI	CTTAAG	1 cut(s)	173
BstAPI	GCANNNNNTGC	1 cut(s)	62
BstBAI	YACGTR	1 cut(s)	623
BstC8I	GCNNGC	3 cut(s)	237, 418, 1344
BstDEI	CTNAG	5 cut(s)	265, 327, 386, 582, 1368
BstEII	GGTNACC	1 cut(s)	1067
BstENI	CCTNNNNNAGG	1 cut(s)	554
BstF5I	GGATG	6 cut(s)	58, 398, 463, 724, 1009, 1195
BstFNI	CGCG	2 cut(s)	1250, 1603
BstKTI	GATC	6 cut(s)	159, 910, 946, 967, 1264, 1710
BstMAI	GTCTC	2 cut(s)	348, 1462
BstMBI	GATC	6 cut(s)	156, 907, 943, 964, 1261, 1707
BstMWI	GCNNNNNNNGC	4 cut(s)	62, 669, 1343, 1348
BstNI	CCWGG	2 cut(s)	371, 453
BstNSI	RCATGY	1 cut(s)	986
BstPI	GGTNACC	1 cut(s)	1067
BstSCI	CCNGG	4 cut(s)	369, 451, 643, 1447
BstSFI	CTRYAG	1 cut(s)	947
BstSLI	GKGCMC	1 cut(s)	1522
BstUI	CGCG	2 cut(s)	1250, 1603
BstV1I	GCAGC	5 cut(s)	106, 128, 165, 845, 1091
BstX2I	RGATCY	2 cut(s)	964, 1707
BstYI	RGATCY	2 cut(s)	964, 1707
BsuRI	GGCC	5 cut(s)	76, 204, 627, 768, 1617
BtsCI	GGATG	6 cut(s)	58, 398, 463, 724, 1009, 1195
BtsIMutI	CAGTG	4 cut(s)	394, 515, 806, 865
Cac8I	GCNNGC	3 cut(s)	237, 418, 1344
Cfr10I	RCCGGY	2 cut(s)	280, 934
Cfr13I	GGNCC	6 cut(s)	98, 202, 449, 599, 1654, 1676
CseI	GACGC	2 cut(s)	13, 863
CspAI	ACCGGT	1 cut(s)	934
CviAII	CATG	5 cut(s)	124, 231, 656, 692, 983
DdeI	CTNAG	5 cut(s)	265, 327, 386, 582, 1368
DpnI	GATC	6 cut(s)	158, 909, 945, 966, 1263, 1709
DpnII	GATC	6 cut(s)	156, 907, 943, 964, 1261, 1707
DraI	TTTAAA	1 cut(s)	1234
EaeI	YGGCCR	1 cut(s)	1615
Eam1104I	CTCTTC	3 cut(s)	549, 807, 1465
EarI	CTCTTC	3 cut(s)	549, 807, 1465
Eco130I	CCWWGG	1 cut(s)	101
Eco147I	AGGCCT	2 cut(s)	76, 768
Eco31I	GGTCTC	1 cut(s)	348
Eco47I	GGWCC	5 cut(s)	98, 449, 599, 1654, 1676
Eco57I	CTGAAG	1 cut(s)	1148
Eco91I	GGTNACC	1 cut(s)	1067
EcoNI	CCTNNNNNAGG	1 cut(s)	554
EcoO65I	GGTNACC	1 cut(s)	1067
EcoRII	CCWGG	2 cut(s)	369, 451
EcoT14I	CCWWGG	1 cut(s)	101
EcoT22I	ATGCAT	1 cut(s)	724
ErhI	CCWWGG	1 cut(s)	101
FaeI	CATG	5 cut(s)	127, 234, 659, 695, 986
FalI	AAGNNNNNCTT	6 cut(s)	320, 352, 534, 566, 863, 895
FaqI	GGGAC	2 cut(s)	1004, 1156
FatI	CATG	5 cut(s)	123, 230, 655, 691, 982
FauI	CCCGC	1 cut(s)	1335
FbaI	TGATCA	1 cut(s)	156
Fnu4HI	GCNGC	6 cut(s)	117, 120, 179, 834, 1105, 1601
FokI	GGATG	6 cut(s)	45, 385, 470, 731, 1016, 1202
Fsp4HI	GCNGC	6 cut(s)	117, 120, 179, 834, 1105, 1601
FspBI	CTAG	8 cut(s)	321, 756, 926, 975, 1352, 1431, 1646, 1665
GluI	GCNGC	6 cut(s)	117, 120, 179, 834, 1105, 1601
GsaI	CCCAGC	1 cut(s)	34
GsuI	CTGGAG	4 cut(s)	448, 516, 539, 759
HaeIII	GGCC	5 cut(s)	76, 204, 627, 768, 1617
HapII	CCGG	6 cut(s)	281, 645, 935, 1072, 1425, 1448
HgaI	GACGC	2 cut(s)	13, 863
Hin1I	GRCGYC	1 cut(s)	680
Hin1II	CATG	5 cut(s)	127, 234, 659, 695, 986
HindIII	AAGCTT	1 cut(s)	22
HinfI	GANTC	5 cut(s)	17, 1167, 1444, 1511, 1649
HpaII	CCGG	6 cut(s)	281, 645, 935, 1072, 1425, 1448
HphI	GGTGA	5 cut(s)	675, 829, 917, 1079, 1533
Hpy166II	GTNNAC	2 cut(s)	506, 1633
Hpy188I	TCNGA	9 cut(s)	16, 618, 912, 1416, 1465, 1534, 1654, 1680, 1712
Hpy188III	TCNNGA	8 cut(s)	533, 975, 1030, 1134, 1211, 1259, 1265, 1313
Hpy8I	GTNNAC	2 cut(s)	506, 1633
Hpy99I	CGWCG	1 cut(s)	879
HpyAV	CCTTC	5 cut(s)	87, 429, 779, 972, 1599
HpyCH4III	ACNGT	3 cut(s)	595, 860, 1456
HpyCH4IV	ACGT	2 cut(s)	622, 680
HpyF10VI	GCNNNNNNNGC	4 cut(s)	62, 669, 1343, 1348
HpyF3I	CTNAG	5 cut(s)	265, 327, 386, 582, 1368
HpySE526I	ACGT	2 cut(s)	622, 680
Hsp92I	GRCGYC	1 cut(s)	680
Hsp92II	CATG	5 cut(s)	127, 234, 659, 695, 986
Ksp22I	TGATCA	1 cut(s)	156
Kzo9I	GATC	6 cut(s)	156, 907, 943, 964, 1261, 1707
LmnI	GCTCC	4 cut(s)	520, 1104, 1427, 1501
Lsp1109I	GCAGC	5 cut(s)	106, 128, 165, 845, 1091
LweI	GCATC	7 cut(s)	709, 748, 788, 820, 994, 1407, 1536
MaeI	CTAG	8 cut(s)	321, 756, 926, 975, 1352, 1431, 1646, 1665
MaeII	ACGT	2 cut(s)	622, 680
MaeIII	GTNAC	6 cut(s)	681, 804, 854, 1067, 1131, 1381
MalI	GATC	6 cut(s)	158, 909, 945, 966, 1263, 1709
MboI	GATC	6 cut(s)	156, 907, 943, 964, 1261, 1707
MboII	GAAGA	8 cut(s)	548, 554, 566, 824, 1061, 1280, 1328, 1452
MflI	RGATCY	2 cut(s)	964, 1707
MhlI	GDGCHC	1 cut(s)	1522
MlyI	GAGTC	1 cut(s)	1643
Mph1103I	ATGCAT	1 cut(s)	724
MseI	TTAA	4 cut(s)	174, 570, 1233, 1394
MspA1I	CMGCKG	3 cut(s)	119, 1104, 1367
MspCI	CTTAAG	1 cut(s)	173
MspI	CCGG	6 cut(s)	281, 645, 935, 1072, 1425, 1448
MspR9I	CCNGG	4 cut(s)	371, 453, 645, 1449
Mva1269I	GAATGC	1 cut(s)	41
MvaI	CCWGG	2 cut(s)	371, 453
MvnI	CGCG	2 cut(s)	1250, 1603
MwoI	GCNNNNNNNGC	4 cut(s)	62, 669, 1343, 1348
NciI	CCSGG	2 cut(s)	645, 1449
NdeII	GATC	6 cut(s)	156, 907, 943, 964, 1261, 1707
NlaIII	CATG	5 cut(s)	127, 234, 659, 695, 986
NlaIV	GGNNCC	3 cut(s)	966, 1100, 1519
NmuCI	GTSAC	4 cut(s)	681, 804, 1067, 1131
NsiI	ATGCAT	1 cut(s)	724
NspI	RCATGY	1 cut(s)	986
PceI	AGGCCT	2 cut(s)	76, 768
PctI	GAATGC	1 cut(s)	41
PfeI	GAWTC	4 cut(s)	17, 1167, 1444, 1511
PfoI	TCCNGGA	1 cut(s)	1447
PinAI	ACCGGT	1 cut(s)	934
PkrI	GCNGC	6 cut(s)	118, 121, 180, 835, 1106, 1602
PleI	GAGTC	1 cut(s)	1643
PpsI	GAGTC	1 cut(s)	1643
Ppu21I	YACGTR	1 cut(s)	623
PsiI	TTATAA	1 cut(s)	473
Psp6I	CCWGG	2 cut(s)	369, 451
PspEI	GGTNACC	1 cut(s)	1067
PspFI	CCCAGC	1 cut(s)	30
PspGI	CCWGG	2 cut(s)	369, 451
PspN4I	GGNNCC	3 cut(s)	966, 1100, 1519
PspPI	GGNCC	6 cut(s)	98, 202, 449, 599, 1654, 1676
PstI	CTGCAG	1 cut(s)	951
PsuI	RGATCY	2 cut(s)	964, 1707
PvuII	CAGCTG	2 cut(s)	119, 1367
SaqAI	TTAA	4 cut(s)	174, 570, 1233, 1394
SatI	GCNGC	6 cut(s)	117, 120, 179, 834, 1105, 1601
Sau3AI	GATC	6 cut(s)	156, 907, 943, 964, 1261, 1707
Sau96I	GGNCC	6 cut(s)	98, 202, 449, 599, 1654, 1676
SchI	GAGTC	1 cut(s)	1643
ScrFI	CCNGG	4 cut(s)	371, 453, 645, 1449
SduI	GDGCHC	1 cut(s)	1522
SfaNI	GCATC	7 cut(s)	709, 748, 788, 820, 994, 1407, 1536
SfcI	CTRYAG	1 cut(s)	947
SinI	GGWCC	5 cut(s)	98, 449, 599, 1654, 1676
SmiI	ATTTAAAT	1 cut(s)	1234
SmlI	CTYRAG	3 cut(s)	173, 698, 880
SmoI	CTYRAG	3 cut(s)	173, 698, 880
SpeI	ACTAGT	1 cut(s)	1664
SseBI	AGGCCT	2 cut(s)	76, 768
SsiI	CCGC	5 cut(s)	447, 1102, 1250, 1342, 1601
SspI	AATATT	1 cut(s)	1567
SspMI	CTAG	8 cut(s)	321, 756, 926, 975, 1352, 1431, 1646, 1665
StuI	AGGCCT	2 cut(s)	76, 768
StyD4I	CCNGG	4 cut(s)	369, 451, 643, 1447
StyI	CCWWGG	1 cut(s)	101
SwaI	ATTTAAAT	1 cut(s)	1234
TaaI	ACNGT	3 cut(s)	595, 860, 1456
TaiI	ACGT	2 cut(s)	625, 683
TauI	GCSGC	1 cut(s)	1603
TfiI	GAWTC	4 cut(s)	17, 1167, 1444, 1511
Tru1I	TTAA	4 cut(s)	174, 570, 1233, 1394
Tru9I	TTAA	4 cut(s)	174, 570, 1233, 1394
TscAI	CASTG	4 cut(s)	394, 522, 813, 865
TseFI	GTSAC	4 cut(s)	681, 804, 1067, 1131
TseI	GCWGC	5 cut(s)	116, 119, 178, 833, 1104
Tsp45I	GTSAC	4 cut(s)	681, 804, 1067, 1131
TspDTI	ATGAA	9 cut(s)	474, 555, 815, 884, 945, 1141, 1206, 1287, 1524
TspRI	CASTG	4 cut(s)	394, 522, 813, 865
Vha464I	CTTAAG	1 cut(s)	173
VpaK11BI	GGWCC	5 cut(s)	98, 449, 599, 1654, 1676
XagI	CCTNNNNNAGG	1 cut(s)	554
XapI	RAATTY	4 cut(s)	50, 1241, 1274, 1606
XbaI	TCTAGA	1 cut(s)	974
XceI	RCATGY	1 cut(s)	986
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1042
XspI	CTAG	8 cut(s)	321, 756, 926, 975, 1352, 1431, 1646, 1665
ZraI	GACGTC	1 cut(s)	681
Zsp2I	ATGCAT	1 cut(s)	724

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.