Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0000771

Physical Location & Seq

Genomic Coordinates Forward (+)

64627593 .. 64632815

Gene Structure 5223 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00272530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGTTCAAGAAGAACCTCCTCCTAGCATGGCGTCACAAAGTCGGCACCCTCGTCCAACTCTTCTCTTCATTCTTTTTCATTTTTCTCATCTTCTGCATCCAGAAAGCACTCGAGGCTAACTCAGCGTCGTCCACGGGGTTCAAGACCATCAAGGACCCCGAGCCTCTGGCCTCGCCGCCGATCCCGCCCTGCGAGGAGAAGGATTTCATCAAGAAGCCTTGCTATGACTTCGTGTGGAGCGGCGATGGGAGCCCGGAGATCCAGACCATTGTGAACGGCATCATGGCTAACAACCCCGGCCGGCAGATCCCGTCGAGCAAGGTGAAAGGGTTTAAATCAACAGATGAAGTAGACAAATGGCTGGCTGATAATCAAAAGATTTGCCCGGGAGCTTTGCATTTTGCGGTAAGAGATGACAAAGTGATTAGCTATGGCGTGCAGACTAATTCCACTCACGTAGCCAAAAGAAGGGAATATGAAGATATCACCATGAAATTCCAAATTCCGCTTCAGATTGCCGCGGAGCGTGAGATTGCTAGGGTTCTGATTGGAGATCCGAATTTTAGCTGGAATGTCGCTTTCAAGGAATTTCCACACCCTGCAAGGGAGTTGTACTCAGCAATTGAGGAAGTAGGACCAACCTTTTTCCTTGCAACCGCAATGTTTGGTTTTGTATTTCAAATGACATCCTTGATCACAGAGAAAGAACTAAAGCTTCGAGAGAGTGGCATTTACAAATGGCTTGTGAGTTCATTCTTCCTCTGGTTTGTCTTGGCTCTCTACTTCGATAACATTCTCGCAAATGCATCTGGTGTGAAAAAACCACTTTATTACTTTTTAACGCCCGGCTACTGGTTAGGGACAGGTGGGGTAAAAGTGAAAGAGGGTAAAAATGCAATACCAAATGATCATATTACTCCAGATGATGCGGATGTCCTTGAAGAGGAGCACCTTGTTAAACAACAATCTATGGAAGGCACACTTGATCCAAGAATTGCAGTTCAGATACGTGGCCTTGTAAAGACATATCCTGGGAAGAAAAGACCTTTTTTGTTCATAAGAATTAAGATCAGAGATCAGAAGGACAAGCTTACCTCTCCAGCATTGATTTATGACCATTCTGCCCGAAGCTCTGGTGGTATGGCAAATATTCGAAAACTTATAGGAGTTTGTCCACAGTTTGATGTTCTTTGGAGTGCGTTGACTGGGCAAGAGCACCTCCAACTGTTCGCTACTATTAAAGGCCTACCCCCAGCTTCAATGGAAACGATTGCTGAGAAGTCATTGGCGGAGGTGAAACTCACTGAGGCAGCTAAAATGAGAGCTGGGAGTTACAGTGGAGGAATGAAACGTCGCCTCAGTGTTGCAATAGCCTTTATTGGTGACCCGAAGTTGGTTATTTTAGATGAACCGACAACCGGTATAGATCCCATAACAAGAAGGCATGTCTGGGACATCATACAGGAGGCCAAGAAAGGGCGTTCAATTGTCCTAACAACCCATTCAATGGAAGAAGCTGACATTCTAAGTGACCGGATAGGAATCATGGCAAAGGGGAGGCTCCGTTGCATCGGAACTTCAATCAGACTGAAGTCACGGTTTGGGAGTGGTTTTATTGCTAATGTGAGCTTAAGGGGAGGTGCTGATAGCCAAAGTCATGAATCTGTGAAGCAGTTCTTTAAATACCATTTGGATGTTTTACACAAAGAAGAGACCGACTGCTATCTGACTTTTGTTATTCCTCAGGAAAAAGAGGGACGTTTGACGAATTTTTTTGCTGAGCTTCAAGATAGGCAACATGAATTTGGTATAGCTGACATCCAACTCGGTCTCACAACTCTAGAAGAAGTTTTCTTGAATATATCAAGGCAAGCGGAGCTAGAAACCGCCATGGCAGAAGGGAGGCTGGTTACTCTCACTTTAACATCTGGAAAGTCAGTTGAGATACCCGTAGGAGCCAAGCATGCGTGGATTCCAGAAACAGAATCTGAAGAGCATCCAAAAGGGCTTATGGTAGAAGTTTACTGGGATCAAGATGAGTCTGGTAAACTCTGCATTGCTGGTCACTCAGCCGAAACTCCAGTACCTCAGAATATTGATCCCATGAGTTTACATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006869 GO:0008150 GO:0010876 GO:0015399 GO:0015405 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0033036 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane_3 ABC_tran

Protein Analysis

705

Amino Acids

78.99

Weight (kDa)

6.83

Isoelectric Point (pI)

37.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	379 - 473	8.5e-13	ABC transporter
AAA_21	PF13304	428 - 505	2.3e-09	AAA domain, putative AbiEii toxin, Type IV TA system
ABCA11_C	PF25158	617 - 671	3.3e-27	ABC transporter A family member 11-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47730 AT5G61690 AT5G61690 AT5G61730 AT5G61730
fragaria_vesca	FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_5g15280 FvH4_5g17010 FvH4_5g17010 FvH4_5g17010
malus_domestica	MD00G1160200.v1.1 MD11G1124700.v1.1
prunus_persica	Prupe.5G188400_v2.0.a1 Prupe.5G229500_v2.0.a1 Prupe.6G093200_v2.0.a1 Prupe.6G093200_v2.0.a1
pyrus_communis	pycom06g19960 pycom11g10520
rosa_chinensis	RchiOBHm_Chr5g0061021 RchiOBHm_Chr7g0178841 RchiOBHm_Chr7g0180781
rosa_laevigata	RLG00000005230 RLG00000005399 RLG00000005401 RLG00000005403 RLG00000005405 RLG00000035420
rosa_multiflora	Rmu_co8148594.1_g000001 Rmu_co8316781.1_g000001 Rmu_co8482325.1_g000001 Rmu_co8514565.1_g000001 Rmu_sc0000888.1_g000001 Rmu_sc0007457.1_g000010 Rmu_sc0026332.1_g000001 Rmu_ssc0000131.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019630 Rroxscaffold_3G00272530 Rroxscaffold_3G00274500
rosa_rugosa	Rorug01G0114900 Rorug01G0115000 Rorug05G0336100 Rorug06G0420200 Rorug06G0420200 Rorug06G0420300 Rorug06G0420300 Rorug06G0436000
rosa_samantha	Rh1BG106800 Rh5AG398400 Rh5BG411300 Rh5CG436300 Rh5DG425700 Rh7AG019700 Rh7AG037700 Rh7BG019100 Rh7BG037400 Rh7CG019800 Rh7CG039100 Rh7DG019700
rosa_wichuraiana	Rw5G037560 Rw7G001590 Rw7G003110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	44
AccB7I	CCANNNNNTGG	1 cut(s)	1507
AccBSI	CCGCTC	1 cut(s)	240
AccI	GTMKAC	1 cut(s)	351
AccII	CGCG	1 cut(s)	521
AclWI	GGATC	8 cut(s)	175, 253, 301, 548, 980, 1421, 2037, 2093
AcoI	YGGCCR	1 cut(s)	298
AcsI	RAATTY	6 cut(s)	494, 501, 559, 587, 1768, 1802
AcuI	CTGAAG	3 cut(s)	494, 1610, 2010
AcyI	GRCGYC	1 cut(s)	31
AfaI	GTAC	2 cut(s)	614, 2085
AfiI	CCNNNNNNNGG	8 cut(s)	468, 604, 852, 943, 1393, 1418, 1476, 1507
AflII	CTTAAG	1 cut(s)	1630
AgeI	ACCGGT	1 cut(s)	1418
AjnI	CCWGG	1 cut(s)	1030
AjuI	GAANNNNNNNTTGG	2 cut(s)	492, 524
Alw21I	GWGCWC	2 cut(s)	951, 1218
Alw26I	GTCTC	2 cut(s)	1706, 1835
AlwI	GGATC	8 cut(s)	175, 253, 301, 548, 980, 1421, 2037, 2093
AlwNI	CAGNNNCTG	1 cut(s)	1988
Ama87I	CYCGRG	3 cut(s)	110, 158, 385
AoxI	GGCC	5 cut(s)	168, 298, 1012, 1243, 1467
ApeKI	GCWGC	1 cut(s)	1310
ApoI	RAATTY	6 cut(s)	494, 501, 559, 587, 1768, 1802
AsiGI	ACCGGT	1 cut(s)	1418
Asp700I	GAANNNNTTC	2 cut(s)	203, 1673
AspS9I	GGNCC	2 cut(s)	154, 635
AsuC2I	CCSGG	5 cut(s)	254, 297, 386, 387, 846
AsuHPI	GGTGA	4 cut(s)	334, 478, 1306, 1394
AsuII	TTCGAA	1 cut(s)	1153
AvaI	CYCGRG	3 cut(s)	110, 158, 385
AvaII	GGWCC	2 cut(s)	154, 635
AxyI	CCTNAGG	1 cut(s)	1743
BaeI	ACNNNNGTAYC	2 cut(s)	2067, 2100
BanI	GGYRCC	1 cut(s)	44
BanII	GRGCYC	1 cut(s)	254
Bbv12I	GWGCWC	2 cut(s)	951, 1218
BbvI	GCAGC	1 cut(s)	1322
BccI	CCATC	2 cut(s)	155, 239
BceAI	ACGGC	1 cut(s)	292
BciT130I	CCWGG	1 cut(s)	1032
BclI	TGATCA	2 cut(s)	693, 907
BcnI	CCSGG	5 cut(s)	254, 297, 386, 387, 846
BcoDI	GTCTC	2 cut(s)	1706, 1835
BfaI	CTAG	4 cut(s)	23, 537, 1841, 1880
BfrI	CTTAAG	1 cut(s)	1630
BisI	GCNGC	4 cut(s)	176, 241, 519, 1311
BlpI	GCTNAGC	1 cut(s)	1779
BlsI	GCNGC	4 cut(s)	177, 242, 520, 1312
Bme1390I	CCNGG	6 cut(s)	254, 297, 386, 387, 846, 1032
Bme18I	GGWCC	2 cut(s)	154, 635
BmeT110I	CYCGRG	3 cut(s)	110, 158, 385
BmgT120I	GGNCC	2 cut(s)	154, 635
BmiI	GGNNCC	5 cut(s)	46, 156, 251, 1562, 1957
BmrFI	CCNGG	6 cut(s)	254, 297, 386, 387, 846, 1032
BmrI	ACTGGG	2 cut(s)	1215, 2035
BmsI	GCATC	6 cut(s)	105, 288, 815, 916, 1578, 2005
BmuI	ACTGGG	2 cut(s)	1215, 2035
BoxI	GACNNNNGTC	1 cut(s)	1591
BplI	GAGNNNNNCTC	4 cut(s)	104, 136, 599, 631
BpmI	CTGGAG	3 cut(s)	903, 1083, 2064
Bpu1102I	GCTNAGC	1 cut(s)	1779
Bpu14I	TTCGAA	1 cut(s)	1153
BpuMI	CCSGG	5 cut(s)	254, 297, 386, 387, 846
BsaAI	YACGTR	2 cut(s)	457, 1010
BsaBI	GATNNNNATC	1 cut(s)	1541
BsaHI	GRCGYC	1 cut(s)	31
BsaI	GGTCTC	2 cut(s)	1706, 1835
BsaJI	CCNNGG	6 cut(s)	132, 295, 385, 519, 1031, 1890
BsaWI	WCCGGW	2 cut(s)	1418, 1533
BsaXI	ACNNNNNCTCC	4 cut(s)	1321, 1351, 1549, 1579
Bsc4I	CCNNNNNNNGG	8 cut(s)	468, 604, 852, 943, 1393, 1418, 1476, 1507
Bse118I	RCCGGY	2 cut(s)	300, 1418
Bse1I	ACTGG	4 cut(s)	857, 1210, 2030, 2081
Bse21I	CCTNAGG	1 cut(s)	1743
Bse3DI	GCAATG	2 cut(s)	666, 2055
Bse8I	GATNNNNATC	1 cut(s)	1541
BseBI	CCWGG	1 cut(s)	1032
BseDI	CCNNGG	6 cut(s)	132, 295, 385, 519, 1031, 1890
BseGI	GGATG	6 cut(s)	96, 686, 937, 1699, 1818, 1996
BseJI	GATNNNNATC	1 cut(s)	1541
BseLI	CCNNNNNNNGG	8 cut(s)	468, 604, 852, 943, 1393, 1418, 1476, 1507
BseMI	GCAATG	2 cut(s)	666, 2055
BseMII	CTCAG	9 cut(s)	135, 630, 1266, 1296, 1372, 1757, 1770, 2082, 2102
BseNI	ACTGG	4 cut(s)	857, 1210, 2030, 2081
BseRI	GAGGAG	3 cut(s)	8, 209, 959
BseX3I	CGGCCG	1 cut(s)	298
BseXI	GCAGC	1 cut(s)	1322
BseYI	CCCAGC	2 cut(s)	1252, 1325
BsgI	GTGCAG	1 cut(s)	458
Bsh1236I	CGCG	1 cut(s)	521
Bsh1285I	CGRYCG	1 cut(s)	301
BshFI	GGCC	5 cut(s)	170, 300, 1014, 1245, 1469
BshNI	GGYRCC	1 cut(s)	44
BshTI	ACCGGT	1 cut(s)	1418
BsiEI	CGRYCG	1 cut(s)	301
BsiHKAI	GWGCWC	2 cut(s)	951, 1218
BsiHKCI	CYCGRG	3 cut(s)	110, 158, 385
BsiSI	CCGG	7 cut(s)	254, 297, 301, 386, 846, 1419, 1534
BslFI	GGGAC	3 cut(s)	874, 1466, 1770
BslI	CCNNNNNNNGG	8 cut(s)	468, 604, 852, 943, 1393, 1418, 1476, 1507
BsmAI	GTCTC	2 cut(s)	1706, 1835
BsmFI	GGGAC	3 cut(s)	874, 1466, 1770
BsnI	GGCC	5 cut(s)	170, 300, 1014, 1245, 1469
Bso31I	GGTCTC	2 cut(s)	1706, 1835
BsoBI	CYCGRG	3 cut(s)	110, 158, 385
Bsp119I	TTCGAA	1 cut(s)	1153
Bsp1286I	GDGCHC	3 cut(s)	254, 951, 1218
Bsp1720I	GCTNAGC	1 cut(s)	1779
Bsp19I	CCATGG	1 cut(s)	1890
BspANI	GGCC	5 cut(s)	170, 300, 1014, 1245, 1469
BspCNI	CTCAG	9 cut(s)	134, 629, 1267, 1297, 1371, 1756, 1771, 2081, 2101
BspFNI	CGCG	1 cut(s)	521
BspHI	TCATGA	1 cut(s)	1657
BspLI	GGNNCC	5 cut(s)	46, 156, 251, 1562, 1957
BspPI	GGATC	8 cut(s)	175, 253, 301, 548, 980, 1421, 2037, 2093
BspQI	GCTCTTC	1 cut(s)	1986
BspT104I	TTCGAA	1 cut(s)	1153
BspT107I	GGYRCC	1 cut(s)	44
BspTI	CTTAAG	1 cut(s)	1630
BspTNI	GGTCTC	2 cut(s)	1706, 1835
BsrBI	CCGCTC	1 cut(s)	240
BsrDI	GCAATG	2 cut(s)	666, 2055
BsrFI	RCCGGY	2 cut(s)	300, 1418
BsrI	ACTGG	4 cut(s)	857, 1210, 2030, 2081
BssAI	RCCGGY	2 cut(s)	300, 1418
BssECI	CCNNGG	6 cut(s)	132, 295, 385, 519, 1031, 1890
BssNI	GRCGYC	1 cut(s)	31
BssT1I	CCWWGG	1 cut(s)	1890
Bst2UI	CCWGG	1 cut(s)	1032
Bst4CI	ACNGT	4 cut(s)	1179, 1227, 1337, 1599
Bst6I	CTCTTC	5 cut(s)	65, 70, 936, 1704, 1986
BstACI	GRCGYC	1 cut(s)	31
BstAFI	CTTAAG	1 cut(s)	1630
BstBAI	YACGTR	2 cut(s)	457, 1010
BstBI	TTCGAA	1 cut(s)	1153
BstC8I	GCNNGC	5 cut(s)	302, 363, 437, 1872, 1965
BstDSI	CCRYGG	3 cut(s)	132, 519, 1890
BstEII	GGTNACC	1 cut(s)	1382
BstENI	CCTNNNNNAGG	1 cut(s)	941
BstF5I	GGATG	6 cut(s)	96, 686, 937, 1699, 1818, 1996
BstFNI	CGCG	1 cut(s)	521
BstMAI	GTCTC	2 cut(s)	1706, 1835
BstMCI	CGRYCG	1 cut(s)	301
BstMWI	GCNNNNNNNGC	6 cut(s)	113, 122, 184, 249, 1876, 1964
BstNI	CCWGG	1 cut(s)	1032
BstNSI	RCATGY	2 cut(s)	1448, 1967
BstPAI	GACNNNNGTC	1 cut(s)	1591
BstPI	GGTNACC	1 cut(s)	1382
BstSCI	CCNGG	6 cut(s)	252, 295, 384, 385, 844, 1030
BstUI	CGCG	1 cut(s)	521
BstV1I	GCAGC	1 cut(s)	1322
BstX2I	RGATCY	4 cut(s)	258, 306, 553, 1426
BstYI	RGATCY	4 cut(s)	258, 306, 553, 1426
BstZI	CGGCCG	1 cut(s)	298
Bsu36I	CCTNAGG	1 cut(s)	1743
BsuRI	GGCC	5 cut(s)	170, 300, 1014, 1245, 1469
BtgI	CCRYGG	3 cut(s)	132, 519, 1890
BtgZI	GCGATG	1 cut(s)	258
BtsCI	GGATG	6 cut(s)	96, 686, 937, 1699, 1818, 1996
BtsIMutI	CAGTG	3 cut(s)	1302, 1342, 1366
Cac8I	GCNNGC	5 cut(s)	302, 363, 437, 1872, 1965
CaiI	CAGNNNCTG	1 cut(s)	1988
CciI	TCATGA	1 cut(s)	1657
Cfr10I	RCCGGY	2 cut(s)	300, 1418
Cfr13I	GGNCC	2 cut(s)	154, 635
Cfr42I	CCGCGG	1 cut(s)	522
Cfr9I	CCCGGG	1 cut(s)	385
CseI	GACGC	2 cut(s)	20, 114
Csp6I	GTAC	2 cut(s)	613, 2084
CspAI	ACCGGT	1 cut(s)	1418
CviQI	GTAC	2 cut(s)	613, 2084
DraI	TTTAAA	2 cut(s)	334, 1681
EaeI	YGGCCR	1 cut(s)	298
EagI	CGGCCG	1 cut(s)	298
Eam1104I	CTCTTC	5 cut(s)	65, 70, 936, 1704, 1986
EarI	CTCTTC	5 cut(s)	65, 70, 936, 1704, 1986
EciI	GGCGGA	1 cut(s)	1304
EclXI	CGGCCG	1 cut(s)	298
Eco130I	CCWWGG	1 cut(s)	1890
Eco147I	AGGCCT	1 cut(s)	1245
Eco24I	GRGCYC	1 cut(s)	254
Eco31I	GGTCTC	2 cut(s)	1706, 1835
Eco32I	GATATC	1 cut(s)	484
Eco47I	GGWCC	2 cut(s)	154, 635
Eco52I	CGGCCG	1 cut(s)	298
Eco57I	CTGAAG	3 cut(s)	494, 1610, 2010
Eco81I	CCTNAGG	1 cut(s)	1743
Eco88I	CYCGRG	3 cut(s)	110, 158, 385
Eco91I	GGTNACC	1 cut(s)	1382
EcoNI	CCTNNNNNAGG	1 cut(s)	941
EcoO109I	RGGNCCY	1 cut(s)	154
EcoO65I	GGTNACC	1 cut(s)	1382
EcoRII	CCWGG	1 cut(s)	1030
EcoRV	GATATC	1 cut(s)	484
EcoT14I	CCWWGG	1 cut(s)	1890
EcoT22I	ATGCAT	1 cut(s)	808
EcoT38I	GRGCYC	1 cut(s)	254
ErhI	CCWWGG	1 cut(s)	1890
FalI	AAGNNNNNCTT	4 cut(s)	966, 998, 1661, 1693
FaqI	GGGAC	3 cut(s)	874, 1466, 1770
FauI	CCCGC	1 cut(s)	192
FbaI	TGATCA	2 cut(s)	693, 907
FblI	GTMKAC	1 cut(s)	351
Fnu4HI	GCNGC	4 cut(s)	176, 241, 519, 1311
FokI	GGATG	6 cut(s)	83, 673, 944, 1706, 1805, 1983
FriOI	GRGCYC	1 cut(s)	254
Fsp4HI	GCNGC	4 cut(s)	176, 241, 519, 1311
FspBI	CTAG	4 cut(s)	23, 537, 1841, 1880
GluI	GCNGC	4 cut(s)	176, 241, 519, 1311
GsaI	CCCAGC	2 cut(s)	1256, 1329
GsuI	CTGGAG	3 cut(s)	903, 1083, 2064
HaeIII	GGCC	5 cut(s)	170, 300, 1014, 1245, 1469
HapII	CCGG	7 cut(s)	254, 297, 301, 386, 846, 1419, 1534
HgaI	GACGC	2 cut(s)	20, 114
Hin1I	GRCGYC	1 cut(s)	31
HincII	GTYRAC	1 cut(s)	1203
HindII	GTYRAC	1 cut(s)	1203
HindIII	AAGCTT	2 cut(s)	713, 1088
HinfI	GANTC	5 cut(s)	1542, 1661, 1972, 1985, 2039
HpaII	CCGG	7 cut(s)	254, 297, 301, 386, 846, 1419, 1534
HphI	GGTGA	4 cut(s)	334, 478, 1306, 1394
Hpy166II	GTNNAC	8 cut(s)	132, 274, 352, 1175, 1203, 2023, 2048, 2111
Hpy8I	GTNNAC	8 cut(s)	132, 274, 352, 1175, 1203, 2023, 2048, 2111
Hpy99I	CGWCG	3 cut(s)	130, 316, 1356
HpyAV	CCTTC	6 cut(s)	193, 462, 968, 1075, 1434, 1892
HpyCH4III	ACNGT	4 cut(s)	1179, 1227, 1337, 1599
HpyCH4IV	ACGT	4 cut(s)	456, 1009, 1351, 1759
HpyF10VI	GCNNNNNNNGC	6 cut(s)	113, 122, 184, 249, 1876, 1964
HpySE526I	ACGT	4 cut(s)	456, 1009, 1351, 1759
Hsp92I	GRCGYC	1 cut(s)	31
KroI	GCCGGC	1 cut(s)	300
KroNI	GCCGGC	1 cut(s)	302
Ksp22I	TGATCA	2 cut(s)	693, 907
KspI	CCGCGG	1 cut(s)	522
LguI	GCTCTTC	1 cut(s)	1986
LmnI	GCTCC	8 cut(s)	237, 249, 389, 523, 946, 1566, 1876, 1955
Lsp1109I	GCAGC	1 cut(s)	1322
LweI	GCATC	6 cut(s)	105, 288, 815, 916, 1578, 2005
MaeI	CTAG	4 cut(s)	23, 537, 1841, 1880
MaeII	ACGT	4 cut(s)	456, 1009, 1351, 1759
MaeIII	GTNAC	7 cut(s)	32, 1331, 1382, 1529, 1593, 1909, 2063
MbiI	CCGCTC	1 cut(s)	240
MfeI	CAATTG	2 cut(s)	621, 1485
MflI	RGATCY	4 cut(s)	258, 306, 553, 1426
MhlI	GDGCHC	3 cut(s)	254, 951, 1218
MlyI	GAGTC	1 cut(s)	2048
MmeI	TCCRAC	3 cut(s)	79, 1246, 1846
Mph1103I	ATGCAT	1 cut(s)	808
MroNI	GCCGGC	1 cut(s)	300
MroXI	GAANNNNTTC	2 cut(s)	203, 1673
MseI	TTAA	8 cut(s)	333, 839, 957, 1065, 1239, 1631, 1680, 1922
MslI	CAYNNNNRTG	1 cut(s)	1692
MspA1I	CMGCKG	1 cut(s)	521
MspCI	CTTAAG	1 cut(s)	1630
MspI	CCGG	7 cut(s)	254, 297, 301, 386, 846, 1419, 1534
MspR9I	CCNGG	6 cut(s)	254, 297, 386, 387, 846, 1032
MunI	CAATTG	2 cut(s)	621, 1485
MvaI	CCWGG	1 cut(s)	1032
MvnI	CGCG	1 cut(s)	521
MwoI	GCNNNNNNNGC	6 cut(s)	113, 122, 184, 249, 1876, 1964
NaeI	GCCGGC	1 cut(s)	302
NciI	CCSGG	5 cut(s)	254, 297, 386, 387, 846
NcoI	CCATGG	1 cut(s)	1890
NgoMIV	GCCGGC	1 cut(s)	300
NlaIV	GGNNCC	5 cut(s)	46, 156, 251, 1562, 1957
NmuCI	GTSAC	5 cut(s)	32, 1382, 1529, 1593, 2063
NsiI	ATGCAT	1 cut(s)	808
NspI	RCATGY	2 cut(s)	1448, 1967
NspV	TTCGAA	1 cut(s)	1153
PaeI	GCATGC	1 cut(s)	1967
PaeR7I	CTCGAG	1 cut(s)	110
PagI	TCATGA	1 cut(s)	1657
PceI	AGGCCT	1 cut(s)	1245
PciSI	GCTCTTC	1 cut(s)	1986
PcsI	WCGNNNNNNNCGW	1 cut(s)	48
PdiI	GCCGGC	1 cut(s)	302
PdmI	GAANNNNTTC	2 cut(s)	203, 1673
PfeI	GAWTC	4 cut(s)	1542, 1661, 1972, 1985
PflMI	CCANNNNNTGG	1 cut(s)	1507
PinAI	ACCGGT	1 cut(s)	1418
PkrI	GCNGC	4 cut(s)	177, 242, 520, 1312
PleI	GAGTC	1 cut(s)	2047
PpsI	GAGTC	1 cut(s)	2047
Ppu21I	YACGTR	2 cut(s)	457, 1010
PpuMI	RGGWCCY	1 cut(s)	154
PshAI	GACNNNNGTC	1 cut(s)	1591
Psp5II	RGGWCCY	1 cut(s)	154
Psp6I	CCWGG	1 cut(s)	1030
PspEI	GGTNACC	1 cut(s)	1382
PspFI	CCCAGC	2 cut(s)	1252, 1325
PspGI	CCWGG	1 cut(s)	1030
PspN4I	GGNNCC	5 cut(s)	46, 156, 251, 1562, 1957
PspPI	GGNCC	2 cut(s)	154, 635
PspPPI	RGGWCCY	1 cut(s)	154
PspXI	VCTCGAGB	1 cut(s)	110
PstNI	CAGNNNCTG	1 cut(s)	1988
PsuI	RGATCY	4 cut(s)	258, 306, 553, 1426
RsaI	GTAC	2 cut(s)	614, 2085
RsaNI	GTAC	2 cut(s)	613, 2084
RseI	CAYNNNNRTG	1 cut(s)	1692
SacII	CCGCGG	1 cut(s)	522
SapI	GCTCTTC	1 cut(s)	1986
SaqAI	TTAA	8 cut(s)	333, 839, 957, 1065, 1239, 1631, 1680, 1922
SatI	GCNGC	4 cut(s)	176, 241, 519, 1311
Sau96I	GGNCC	2 cut(s)	154, 635
SchI	GAGTC	1 cut(s)	2048
ScrFI	CCNGG	6 cut(s)	254, 297, 386, 387, 846, 1032
SduI	GDGCHC	3 cut(s)	254, 951, 1218
SfaNI	GCATC	6 cut(s)	105, 288, 815, 916, 1578, 2005
Sfr274I	CTCGAG	1 cut(s)	110
Sfr303I	CCGCGG	1 cut(s)	522
SfuI	TTCGAA	1 cut(s)	1153
SgrBI	CCGCGG	1 cut(s)	522
SinI	GGWCC	2 cut(s)	154, 635
SlaI	CTCGAG	1 cut(s)	110
SmaI	CCCGGG	1 cut(s)	387
SmiMI	CAYNNNNRTG	1 cut(s)	1692
SmlI	CTYRAG	2 cut(s)	110, 1630
SmoI	CTYRAG	2 cut(s)	110, 1630
SphI	GCATGC	1 cut(s)	1967
SseBI	AGGCCT	1 cut(s)	1245
SspI	AATATT	2 cut(s)	1150, 2095
SspMI	CTAG	4 cut(s)	23, 537, 1841, 1880
StuI	AGGCCT	1 cut(s)	1245
StyD4I	CCNGG	6 cut(s)	252, 295, 384, 385, 844, 1030
StyI	CCWWGG	1 cut(s)	1890
TaaI	ACNGT	4 cut(s)	1179, 1227, 1337, 1599
TaiI	ACGT	4 cut(s)	459, 1012, 1354, 1762
TaqI	TCGA	5 cut(s)	111, 314, 718, 786, 1153
TaqII	GACCGA	2 cut(s)	1730, 1817
TatI	WGTACW	1 cut(s)	612
TauI	GCSGC	3 cut(s)	178, 243, 521
TfiI	GAWTC	4 cut(s)	1542, 1661, 1972, 1985
Tru1I	TTAA	8 cut(s)	333, 839, 957, 1065, 1239, 1631, 1680, 1922
Tru9I	TTAA	8 cut(s)	333, 839, 957, 1065, 1239, 1631, 1680, 1922
TscAI	CASTG	3 cut(s)	1309, 1342, 1366
TseFI	GTSAC	5 cut(s)	32, 1382, 1529, 1593, 2063
TseI	GCWGC	1 cut(s)	1310
Tsp45I	GTSAC	5 cut(s)	32, 1382, 1529, 1593, 2063
TspGWI	ACGGA	1 cut(s)	1553
TspMI	CCCGGG	1 cut(s)	385
TspRI	CASTG	3 cut(s)	1309, 1342, 1366
Van91I	CCANNNNNTGG	1 cut(s)	1507
Vha464I	CTTAAG	1 cut(s)	1630
VpaK11BI	GGWCC	2 cut(s)	154, 635
XagI	CCTNNNNNAGG	1 cut(s)	941
XapI	RAATTY	6 cut(s)	494, 501, 559, 587, 1768, 1802
XbaI	TCTAGA	1 cut(s)	1840
XceI	RCATGY	2 cut(s)	1448, 1967
XhoI	CTCGAG	1 cut(s)	110
XmaI	CCCGGG	1 cut(s)	385
XmiI	GTMKAC	1 cut(s)	351
XmnI	GAANNNNTTC	2 cut(s)	203, 1673
XspI	CTAG	4 cut(s)	23, 537, 1841, 1880
Zsp2I	ATGCAT	1 cut(s)	808

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.