Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0000771

Physical Location & Seq

Genomic Coordinates Forward (+)

66735166 .. 66741514

Gene Structure 6349 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000035420

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3030 bp

ATGGATTTGCAGAGCGGAGCCCCATTGCTGTTGCAGCAATTCAAGGCTCTGTTCCGGAAGAACCTGATGCTCGCATGGCGGAAGAAGGCGGCGACGTTCCTCCAGCTCTTCTCGTCCTTGTTCTTCATCTTCCTCCTCTTCTGTATCCAGAAGGCCATGGTGGCTCGATTCGCCTCCTCCACCACTTACAAGAGCGTCACCGATCCCCAGCCTCTGGTTGCGCCGCCGATCCCGCCCTGCGAGGACAAGTACTACATCCACAAGCCCTGCTTTGACTTCGTGTGGAGCGGAAATGACAGCCCTAGGATTCGGAGCATTGCCACTGCCATCATGGCTAACAATCCCGGCCGGCCGATTCCGTCGACAAAGGTCAAATCATTTAAAACAAAAGCTGATGTAGATGTATGGCTATTTAGTAATCCTATGTACTGCCCCGGAGCTTTGCATTTTGTGGAAAGAAATGCCAGTGTTATTAGTTATGGCATACAGACCAACTCTACTCCTCTTGCAAAACAAGGGCAATTTGAGGATCCCACATTCAAATTTCAAATTCCCCTTCAGATTGCTGCAGAGCGTGAAATTGCTAGGTCTTTGATTGGAGTTCCAAACTTCAGCTGGGTTGTCGCGCTAAAAGAATTTGCACACCCTTCAAGGGAGATTCCGTCTGCATTGCAGACAGTAGGACCGACCTTCTTTCTTGCAATTTCCATGTTTGGTTTTGTGTTTCAAATGAGTTCTTTGATCACAGAAAAAGAACTAAAGCTTCGACAGGCAATGACAATTATGGGTCTTTATGACTCTGCATACTGGTTCTCATGGCTCACATGGGAGGGAATCATTACACTTCTCTCATCACTTTTCATCACTCTGTTTGGAATGATATTTCAGTTTGATATGTTTCTGAAAAACAATTTTGCGGTCATCTTCCTCATTTTCTTTCTTTTTCAACTCAATATGATTGGTTTTGCCTTTATGTTATCGGCATTCATAAGCAAGTCATCTTCATCTACAACTGTGGGTTTCTCCATATATATTGTTGGATCTGTCACCCAGATTGTCACAGCCGCTGGATTTCCCTACAGCCAAAACATCCGCAAAAGGTATAGAATAATGTGGTCATTATTCCCGCCAAATCTTCTTGCCAAAGCTCTAGAGATACTCTCTGGTGCAACATCTCCCCCTTATGATATGGGCATAAAATGGAGTGGAATAACAAAGTGTCCACCAAATGAAACGGACTGCGTTATAACAATTAGTGACATTTTTAAATGGCTGGCGGCAACATTCTTTCTCTGGTTTGTATTGGCTATCTACTTCGATAATATCATCCCAAATGTATCTGGTGTCAGAAAATCAGTTTTTTACTTTTTAAATCCTGGGTACTGGCTAGGGAGGGGTGGAAAAGCGGAAGAGGGTGGCATTTGCAGTTGCATAGGTTCAGTTCCAGAACAGGAGCCACTTACTCCAGATGATGAAGATGTACTTGAAGAAGAGAACATTGTAAAACAACAAACTAGCGAGGGCATAGTTGATCCAAATATTGCAGTTCAGATACGTGGCCTCTCAAAATCATATCCAGGGACCACAAAAATTGGTTGCTGTAGATGCAAGAGCACGTCACCTTACCATGCTCTGAAGGGTCTATGGGTGAATTTTTCCAAGAATCAGCTATTTTGTTTACTTGGGCCAAATGGAGCTGGGAAGACCACCACAATCAATTGTTTGACTGGCATCACACCCGTTACTGGCGGAGATGCATTGATTTATGGGAACTCTGTTCGAAGCTCTGTTGGCATGGCTAAAATTCGGCAAATTATAGGAGTTTGTCCGCAGTTTGATATTCTTTGGGATGCATTGTCTGGGCAAGAGCACCTCCACCTGTTTGCTAGTATTAAAGGCCTATCCCCAGCTTCAATAAAAGTGGTTGCTCAGAAGTCATTGGTAGAAGTAAGACTCACCGAGGCAGCCAAAATTAGAGCTGGGAGTTACAGTGGAGGAATGAAACGTCGCTTAAGTGTGGCAATAGCCCTTATTGGTGATCCAAAGTTAGTCATCTTAGATGAACCGACAACTGGTATGGATCCAATAACTAGAAGACATGTGTGGGACATCATTGAGGATGCAAAAAAGGGGCGTGCAATTGTCCTAACCACTCACTCAATGGAAGAAGCTGACATTTTAAGTGATAGGATAGGAATAATGGCAAAGGGTAGGCTCCGTTGCATTGGTACTTCAATCAGGCTGAAATCACGGTTTGGTACTGGCTTTATTGCTACTGTTAGTTTCAGTGAAAACACCAATGGACAAAGCCCTCCACATGGGAATGCACTTACTACACCTCACCATGAGGCAGTGAAGCAGTTCTTTAAATATCATTTGGATGTTTTACCGAAAGAAGAGAACAAAGCCTTTCTGACTTTTGTTATTCCTCATGACAGAGAGGCACTTCTGACGAAATTTTTTAAGGAGCTTCAAGATAGAGAAATTGAGTTTGGTATCTCAGACATCCAACTGGGTCTTACAACTCTTGAAGAAGTTTTCTTGAATATCGCAAGGCAGGCAGAGCTAGAAACTGCCACGGCTGAGGGGAGGTTGGTCACTCTCACATTAACATCCGGAGCCTTAATCGAGATACCTGTAGGAGCTAGGTTTATTGGGATTCCAGGTACAGAATCCACAGAAAATCCAAGAGGAGTTATGGTAGAAGTTTACTGGGTGCAAGATGATTCCGGTTCCCTCTGCATTTCAGGCCACTCACCTGAAACTCCAATACCTCCAAATGTTGAACCAATGCCTTCCTTGGCACCTACTTCACGCCGAAGTCTGTTACCAGTTCATGGAGTTATTCTATCCTCCCTTGGGAGAGGCAATTACGGATTGCCATCAAGCCTTCGAGATGAGATCAGAGGCCGCACGGCATTTTCATCTGTATCCCATCTCCACTCTCCCTCTGACGCCGTCGGGCTCTCATCACAGACGTCGTCGGGCTCTCATCACAGACCAATCGAGCCAAACACCATCACATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006869 GO:0008150 GO:0010876 GO:0015399 GO:0015405 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0033036 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane_3 ABC_tran

Protein Analysis

1010

Amino Acids

111.35

Weight (kDa)

8.72

Isoelectric Point (pI)

39.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC2_membrane_3	PF12698	221 - 438	1.5e-17	ABC-2 family transporter protein
ABC_tran	PF00005	546 - 691	4e-24	ABC transporter
AAA_21	PF13304	646 - 723	2.2e-09	AAA domain, putative AbiEii toxin, Type IV TA system
ABCA11_C	PF25158	846 - 900	1.7e-30	ABC transporter A family member 11-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47730 AT5G61690 AT5G61690 AT5G61730 AT5G61730
fragaria_vesca	FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_5g15280 FvH4_5g17010 FvH4_5g17010 FvH4_5g17010
malus_domestica	MD00G1160200.v1.1 MD11G1124700.v1.1
prunus_persica	Prupe.5G188400_v2.0.a1 Prupe.5G229500_v2.0.a1 Prupe.6G093200_v2.0.a1 Prupe.6G093200_v2.0.a1
pyrus_communis	pycom06g19960 pycom11g10520
rosa_chinensis	RchiOBHm_Chr5g0061021 RchiOBHm_Chr7g0178841 RchiOBHm_Chr7g0180781
rosa_laevigata	RLG00000005230 RLG00000005399 RLG00000005401 RLG00000005403 RLG00000005405 RLG00000035420
rosa_multiflora	Rmu_co8148594.1_g000001 Rmu_co8316781.1_g000001 Rmu_co8482325.1_g000001 Rmu_co8514565.1_g000001 Rmu_sc0000888.1_g000001 Rmu_sc0007457.1_g000010 Rmu_sc0026332.1_g000001 Rmu_ssc0000131.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019630 Rroxscaffold_3G00272530 Rroxscaffold_3G00274500
rosa_rugosa	Rorug01G0114900 Rorug01G0115000 Rorug05G0336100 Rorug06G0420200 Rorug06G0420200 Rorug06G0420300 Rorug06G0420300 Rorug06G0436000
rosa_samantha	Rh1BG106800 Rh5AG398400 Rh5BG411300 Rh5CG436300 Rh5DG425700 Rh7AG019700 Rh7AG037700 Rh7BG019100 Rh7BG037400 Rh7CG019800 Rh7CG039100 Rh7DG019700
rosa_wichuraiana	Rw5G037560 Rw7G001590 Rw7G003110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1247
AatII	GACGTC	1 cut(s)	2981
AccB1I	GGYRCC	1 cut(s)	2803
AccB7I	CCANNNNNTGG	2 cut(s)	214, 2837
AccBSI	CCGCTC	2 cut(s)	15, 288
AccI	GTMKAC	1 cut(s)	362
AccII	CGCG	1 cut(s)	626
AccIII	TCCGGA	2 cut(s)	54, 2615
AclWI	GGATC	9 cut(s)	197, 223, 524, 537, 1048, 1526, 2033, 2075, 2088
AcoI	YGGCCR	2 cut(s)	346, 350
AcsI	RAATTY	6 cut(s)	542, 549, 635, 1651, 1803, 2456
AcuI	CTGAAG	3 cut(s)	542, 595, 1655
AcyI	GRCGYC	2 cut(s)	2955, 2978
AfaI	GTAC	7 cut(s)	251, 428, 1382, 1482, 2230, 2260, 2668
AfiI	CCNNNNNNNGG	7 cut(s)	214, 652, 1745, 2072, 2318, 2837, 2859
AflII	CTTAAG	1 cut(s)	2011
AflIII	ACRYGT	1 cut(s)	2098
AjiI	CACGTC	1 cut(s)	1617
AjnI	CCWGG	3 cut(s)	1375, 1576, 2662
AjuI	GAANNNNNNNTTGG	2 cut(s)	2475, 2507
Alw21I	GWGCWC	2 cut(s)	1616, 1872
AlwI	GGATC	9 cut(s)	197, 223, 524, 537, 1048, 1526, 2033, 2075, 2088
AlwNI	CAGNNNCTG	2 cut(s)	214, 1067
Aor13HI	TCCGGA	2 cut(s)	54, 2615
AoxI	GGCC	8 cut(s)	153, 346, 350, 1558, 1685, 1897, 2749, 2908
ApeKI	GCWGC	3 cut(s)	34, 566, 1964
ApoI	RAATTY	6 cut(s)	542, 549, 635, 1651, 1803, 2456
Asp700I	GAANNNNTTC	1 cut(s)	2360
AspA2I	CCTAGG	1 cut(s)	302
AspLEI	GCGC	2 cut(s)	223, 628
AspS9I	GGNCC	3 cut(s)	683, 1581, 1685
AsuC2I	CCSGG	2 cut(s)	345, 435
AsuHPI	GGTGA	8 cut(s)	190, 1039, 1611, 1660, 1948, 2048, 2333, 2748
AsuII	TTCGAA	1 cut(s)	1780
AvaII	GGWCC	2 cut(s)	683, 1581
AvrII	CCTAGG	1 cut(s)	302
BamHI	GGATCC	2 cut(s)	529, 2080
BanI	GGYRCC	1 cut(s)	2803
BanII	GRGCYC	3 cut(s)	22, 2967, 2990
BbsI	GAAGAC	2 cut(s)	1709, 2101
Bbv12I	GWGCWC	2 cut(s)	1616, 1872
BbvCI	CCTCAGC	1 cut(s)	2583
BbvI	GCAGC	3 cut(s)	46, 553, 1976
BccI	CCATC	4 cut(s)	335, 2890, 2943, 3026
BceAI	ACGGC	3 cut(s)	2595, 2931, 2942
BciT130I	CCWGG	3 cut(s)	1377, 1578, 2664
BciVI	GTATCC	2 cut(s)	155, 2941
BclI	TGATCA	1 cut(s)	741
BcnI	CCSGG	2 cut(s)	345, 435
BfaI	CTAG	9 cut(s)	303, 585, 1151, 1388, 1515, 1887, 2091, 2567, 2646
BfmI	CTRYAG	4 cut(s)	567, 1078, 1600, 2637
BfrI	CTTAAG	1 cut(s)	2011
BfuI	GTATCC	2 cut(s)	155, 2941
BglI	GCCNNNNNGGC	2 cut(s)	161, 332
BisI	GCNGC	8 cut(s)	35, 90, 224, 567, 1065, 1278, 1965, 2911
BlnI	CCTAGG	1 cut(s)	302
BlsI	GCNGC	8 cut(s)	36, 91, 225, 568, 1066, 1279, 1966, 2912
BmcAI	AGTACT	1 cut(s)	251
Bme1390I	CCNGG	5 cut(s)	345, 435, 1377, 1578, 2664
Bme18I	GGWCC	2 cut(s)	683, 1581
BmgBI	CACGTC	1 cut(s)	1617
BmgT120I	GGNCC	3 cut(s)	683, 1581, 1685
BmiI	GGNNCC	9 cut(s)	19, 531, 1455, 1582, 2082, 2216, 2620, 2734, 2805
BmrFI	CCNGG	5 cut(s)	345, 435, 1377, 1578, 2664
BmrI	ACTGGG	2 cut(s)	2522, 2722
BmsI	GCATC	6 cut(s)	57, 1595, 1740, 1744, 1840, 2110
BmuI	ACTGGG	2 cut(s)	2522, 2722
BoxI	GACNNNNGTC	1 cut(s)	368
BpiI	GAAGAC	2 cut(s)	1709, 2101
BplI	GAGNNNNNCTC	2 cut(s)	1145, 1177
BpmI	CTGGAG	2 cut(s)	86, 1449
Bpu10I	CCTNAGC	1 cut(s)	2583
Bpu14I	TTCGAA	1 cut(s)	1780
BpuMI	CCSGG	2 cut(s)	345, 435
BsaAI	YACGTR	1 cut(s)	1556
BsaBI	GATNNNNATC	1 cut(s)	2881
BsaHI	GRCGYC	2 cut(s)	2955, 2978
BsaJI	CCNNGG	9 cut(s)	156, 302, 433, 1376, 1577, 1959, 2577, 2799, 2857
BsaWI	WCCGGW	3 cut(s)	54, 2615, 2729
BsaXI	ACNNNNNCTCC	6 cut(s)	647, 677, 1975, 2005, 2685, 2715
Bsc4I	CCNNNNNNNGG	7 cut(s)	214, 652, 1745, 2072, 2318, 2837, 2859
Bse118I	RCCGGY	1 cut(s)	348
Bse3DI	GCAATG	4 cut(s)	23, 315, 668, 780
Bse8I	GATNNNNATC	1 cut(s)	2881
BseAI	TCCGGA	2 cut(s)	54, 2615
BseBI	CCWGG	3 cut(s)	1377, 1578, 2664
BseDI	CCNNGG	9 cut(s)	156, 302, 433, 1376, 1577, 1959, 2577, 2799, 2857
BseGI	GGATG	8 cut(s)	255, 1089, 1326, 1855, 2125, 2386, 2505, 2612
BseJI	GATNNNNATC	1 cut(s)	2881
BseLI	CCNNNNNNNGG	7 cut(s)	214, 652, 1745, 2072, 2318, 2837, 2859
BseMI	GCAATG	4 cut(s)	23, 315, 668, 780
BseMII	CTCAG	3 cut(s)	1943, 2514, 2574
BseRI	GAGGAG	4 cut(s)	125, 166, 492, 2706
BseX3I	CGGCCG	2 cut(s)	346, 350
BseXI	GCAGC	3 cut(s)	46, 553, 1976
BseYI	CCCAGC	5 cut(s)	207, 615, 1697, 1906, 1979
Bsh1236I	CGCG	1 cut(s)	626
Bsh1285I	CGRYCG	2 cut(s)	349, 353
BshFI	GGCC	8 cut(s)	155, 348, 352, 1560, 1687, 1899, 2751, 2910
BshNI	GGYRCC	1 cut(s)	2803
BsiEI	CGRYCG	2 cut(s)	349, 353
BsiHKAI	GWGCWC	2 cut(s)	1616, 1872
BsiSI	CCGG	6 cut(s)	55, 345, 349, 435, 2616, 2730
BslFI	GGGAC	2 cut(s)	1594, 2120
BslI	CCNNNNNNNGG	7 cut(s)	214, 652, 1745, 2072, 2318, 2837, 2859
BsmFI	GGGAC	2 cut(s)	1594, 2120
BsmI	GAATGC	2 cut(s)	983, 2329
BsnI	GGCC	8 cut(s)	155, 348, 352, 1560, 1687, 1899, 2751, 2910
Bsp119I	TTCGAA	1 cut(s)	1780
Bsp1286I	GDGCHC	5 cut(s)	22, 1616, 1872, 2967, 2990
Bsp13I	TCCGGA	2 cut(s)	54, 2615
Bsp143I	GATC	9 cut(s)	202, 228, 529, 741, 1040, 1531, 2038, 2080, 2901
Bsp19I	CCATGG	1 cut(s)	156
BspANI	GGCC	8 cut(s)	155, 348, 352, 1560, 1687, 1899, 2751, 2910
BspCNI	CTCAG	3 cut(s)	1942, 2513, 2575
BspEI	TCCGGA	2 cut(s)	54, 2615
BspFNI	CGCG	1 cut(s)	626
BspHI	TCATGA	2 cut(s)	2431, 3026
BspLI	GGNNCC	9 cut(s)	19, 531, 1455, 1582, 2082, 2216, 2620, 2734, 2805
BspMAI	CTGCAG	1 cut(s)	571
BspPI	GGATC	9 cut(s)	197, 223, 524, 537, 1048, 1526, 2033, 2075, 2088
BspQI	GCTCTTC	1 cut(s)	113
BspT104I	TTCGAA	1 cut(s)	1780
BspT107I	GGYRCC	1 cut(s)	2803
BspTI	CTTAAG	1 cut(s)	2011
BsrBI	CCGCTC	2 cut(s)	15, 288
BsrDI	GCAATG	4 cut(s)	23, 315, 668, 780
BsrFI	RCCGGY	1 cut(s)	348
BssAI	RCCGGY	1 cut(s)	348
BssECI	CCNNGG	9 cut(s)	156, 302, 433, 1376, 1577, 1959, 2577, 2799, 2857
BssMI	GATC	9 cut(s)	202, 228, 529, 741, 1040, 1531, 2038, 2080, 2901
BssNI	GRCGYC	2 cut(s)	2955, 2978
BssT1I	CCWWGG	4 cut(s)	156, 302, 2799, 2857
Bst2UI	CCWGG	3 cut(s)	1377, 1578, 2664
Bst4CI	ACNGT	5 cut(s)	679, 1015, 1991, 2253, 2278
Bst6I	CTCTTC	5 cut(s)	113, 143, 1404, 1485, 2391
BstACI	GRCGYC	2 cut(s)	2955, 2978
BstAFI	CTTAAG	1 cut(s)	2011
BstBAI	YACGTR	1 cut(s)	1556
BstBI	TTCGAA	1 cut(s)	1780
BstC8I	GCNNGC	5 cut(s)	72, 350, 1275, 2136, 2559
BstDEI	CTNAG	4 cut(s)	1929, 2056, 2500, 2583
BstDSI	CCRYGG	2 cut(s)	156, 2577
BstF5I	GGATG	8 cut(s)	255, 1089, 1326, 1855, 2125, 2386, 2505, 2612
BstFNI	CGCG	1 cut(s)	626
BstHHI	GCGC	2 cut(s)	223, 628
BstKTI	GATC	9 cut(s)	205, 231, 532, 744, 1043, 1534, 2041, 2083, 2904
BstMBI	GATC	9 cut(s)	202, 228, 529, 741, 1040, 1531, 2038, 2080, 2901
BstMCI	CGRYCG	2 cut(s)	349, 353
BstNI	CCWGG	3 cut(s)	1377, 1578, 2664
BstNSI	RCATGY	1 cut(s)	2102
BstPAI	GACNNNNGTC	1 cut(s)	368
BstSCI	CCNGG	5 cut(s)	343, 433, 1375, 1576, 2662
BstSFI	CTRYAG	4 cut(s)	567, 1078, 1600, 2637
BstUI	CGCG	1 cut(s)	626
BstV1I	GCAGC	3 cut(s)	46, 553, 1976
BstV2I	GAAGAC	2 cut(s)	1709, 2101
BstX2I	RGATCY	3 cut(s)	529, 1040, 2080
BstYI	RGATCY	3 cut(s)	529, 1040, 2080
BstZI	CGGCCG	2 cut(s)	346, 350
BsuI	GTATCC	2 cut(s)	155, 2941
BsuRI	GGCC	8 cut(s)	155, 348, 352, 1560, 1687, 1899, 2751, 2910
BtgI	CCRYGG	2 cut(s)	156, 2577
BtrI	CACGTC	1 cut(s)	1617
BtsCI	GGATG	8 cut(s)	255, 1089, 1326, 1855, 2125, 2386, 2505, 2612
BtsI	GCAGTG	2 cut(s)	321, 2358
BtsIMutI	CAGTG	5 cut(s)	321, 472, 1996, 2293, 2358
Cac8I	GCNNGC	5 cut(s)	72, 350, 1275, 2136, 2559
CaiI	CAGNNNCTG	2 cut(s)	214, 1067
CciI	TCATGA	2 cut(s)	2431, 3026
CfoI	GCGC	2 cut(s)	223, 628
Cfr10I	RCCGGY	1 cut(s)	348
Cfr13I	GGNCC	3 cut(s)	683, 1581, 1685
CseI	GACGC	2 cut(s)	184, 2963
Csp6I	GTAC	7 cut(s)	250, 427, 1381, 1481, 2229, 2259, 2667
CspCI	CAANNNNNGTGG	4 cut(s)	1573, 1608, 1902, 1937
CviQI	GTAC	7 cut(s)	250, 427, 1381, 1481, 2229, 2259, 2667
DdeI	CTNAG	4 cut(s)	1929, 2056, 2500, 2583
DpnI	GATC	9 cut(s)	204, 230, 531, 743, 1042, 1533, 2040, 2082, 2903
DpnII	GATC	9 cut(s)	202, 228, 529, 741, 1040, 1531, 2038, 2080, 2901
DraI	TTTAAA	4 cut(s)	382, 1267, 1371, 2368
EaeI	YGGCCR	2 cut(s)	346, 350
EagI	CGGCCG	2 cut(s)	346, 350
Eam1104I	CTCTTC	5 cut(s)	113, 143, 1404, 1485, 2391
EarI	CTCTTC	5 cut(s)	113, 143, 1404, 1485, 2391
EciI	GGCGGA	2 cut(s)	94, 1764
EclXI	CGGCCG	2 cut(s)	346, 350
Eco130I	CCWWGG	4 cut(s)	156, 302, 2799, 2857
Eco147I	AGGCCT	1 cut(s)	1899
Eco24I	GRGCYC	3 cut(s)	22, 2967, 2990
Eco47I	GGWCC	2 cut(s)	683, 1581
Eco52I	CGGCCG	2 cut(s)	346, 350
Eco57I	CTGAAG	3 cut(s)	542, 595, 1655
EcoRII	CCWGG	3 cut(s)	1375, 1576, 2662
EcoT14I	CCWWGG	4 cut(s)	156, 302, 2799, 2857
EcoT22I	ATGCAT	2 cut(s)	1759, 1855
EcoT38I	GRGCYC	3 cut(s)	22, 2967, 2990
ErhI	CCWWGG	4 cut(s)	156, 302, 2799, 2857
FalI	AAGNNNNNCTT	6 cut(s)	254, 286, 1467, 1499, 2348, 2380
FaqI	GGGAC	2 cut(s)	1594, 2120
FauI	CCCGC	2 cut(s)	240, 1134
FbaI	TGATCA	1 cut(s)	741
FblI	GTMKAC	1 cut(s)	362
Fnu4HI	GCNGC	8 cut(s)	35, 90, 224, 567, 1065, 1278, 1965, 2911
FokI	GGATG	8 cut(s)	242, 1076, 1313, 1862, 2132, 2393, 2492, 2599
FriOI	GRGCYC	3 cut(s)	22, 2967, 2990
FseI	GGCCGGCC	1 cut(s)	352
Fsp4HI	GCNGC	8 cut(s)	35, 90, 224, 567, 1065, 1278, 1965, 2911
FspBI	CTAG	9 cut(s)	303, 585, 1151, 1388, 1515, 1887, 2091, 2567, 2646
GlaI	GCGC	2 cut(s)	222, 627
GluI	GCNGC	8 cut(s)	35, 90, 224, 567, 1065, 1278, 1965, 2911
GsaI	CCCAGC	5 cut(s)	211, 619, 1701, 1910, 1983
GsuI	CTGGAG	2 cut(s)	86, 1449
HaeIII	GGCC	8 cut(s)	155, 348, 352, 1560, 1687, 1899, 2751, 2910
HapII	CCGG	6 cut(s)	55, 345, 349, 435, 2616, 2730
HgaI	GACGC	2 cut(s)	184, 2963
HhaI	GCGC	2 cut(s)	223, 628
Hin1I	GRCGYC	2 cut(s)	2955, 2978
Hin6I	GCGC	2 cut(s)	221, 626
HinP1I	GCGC	2 cut(s)	221, 626
HincII	GTYRAC	1 cut(s)	363
HindII	GTYRAC	1 cut(s)	363
HindIII	AAGCTT	1 cut(s)	761
HpaII	CCGG	6 cut(s)	55, 345, 349, 435, 2616, 2730
HphI	GGTGA	8 cut(s)	190, 1039, 1611, 1660, 1948, 2048, 2333, 2748
Hpy166II	GTNNAC	4 cut(s)	363, 1223, 1679, 2710
Hpy8I	GTNNAC	4 cut(s)	363, 1223, 1679, 2710
Hpy99I	CGWCG	6 cut(s)	97, 364, 2010, 2963, 2983, 2986
HpyAV	CCTTC	8 cut(s)	79, 145, 566, 657, 700, 1630, 2805, 2900
HpyCH4III	ACNGT	5 cut(s)	679, 1015, 1991, 2253, 2278
HpyCH4IV	ACGT	5 cut(s)	95, 1555, 1616, 2005, 2978
HpyF3I	CTNAG	4 cut(s)	1929, 2056, 2500, 2583
HpySE526I	ACGT	5 cut(s)	95, 1555, 1616, 2005, 2978
Hsp92I	GRCGYC	2 cut(s)	2955, 2978
HspAI	GCGC	2 cut(s)	221, 626
Kpn2I	TCCGGA	2 cut(s)	54, 2615
KroI	GCCGGC	1 cut(s)	348
KroNI	GCCGGC	1 cut(s)	350
Ksp22I	TGATCA	1 cut(s)	741
Kzo9I	GATC	9 cut(s)	202, 228, 529, 741, 1040, 1531, 2038, 2080, 2901
LguI	GCTCTTC	1 cut(s)	113
Lsp1109I	GCAGC	3 cut(s)	46, 553, 1976
LweI	GCATC	6 cut(s)	57, 1595, 1740, 1744, 1840, 2110
MaeI	CTAG	9 cut(s)	303, 585, 1151, 1388, 1515, 1887, 2091, 2567, 2646
MaeII	ACGT	5 cut(s)	95, 1555, 1616, 2005, 2978
MaeIII	GTNAC	9 cut(s)	196, 1045, 1057, 1256, 1617, 1741, 1985, 2596, 2826
MalI	GATC	9 cut(s)	204, 230, 531, 743, 1042, 1533, 2040, 2082, 2903
MbiI	CCGCTC	2 cut(s)	15, 288
MboI	GATC	9 cut(s)	202, 228, 529, 741, 1040, 1531, 2038, 2080, 2901
MfeI	CAATTG	2 cut(s)	1717, 2139
MflI	RGATCY	3 cut(s)	529, 1040, 2080
MhlI	GDGCHC	5 cut(s)	22, 1616, 1872, 2967, 2990
MlyI	GAGTC	2 cut(s)	791, 1947
MmeI	TCCRAC	2 cut(s)	1018, 2533
Mph1103I	ATGCAT	2 cut(s)	1759, 1855
MroI	TCCGGA	2 cut(s)	54, 2615
MroNI	GCCGGC	1 cut(s)	348
MroXI	GAANNNNTTC	1 cut(s)	2360
MslI	CAYNNNNRTG	2 cut(s)	2322, 2379
MspA1I	CMGCKG	2 cut(s)	615, 1067
MspCI	CTTAAG	1 cut(s)	2011
MspI	CCGG	6 cut(s)	55, 345, 349, 435, 2616, 2730
MspR9I	CCNGG	5 cut(s)	345, 435, 1377, 1578, 2664
MunI	CAATTG	2 cut(s)	1717, 2139
Mva1269I	GAATGC	2 cut(s)	983, 2329
MvaI	CCWGG	3 cut(s)	1377, 1578, 2664
MvnI	CGCG	1 cut(s)	626
NaeI	GCCGGC	1 cut(s)	350
NciI	CCSGG	2 cut(s)	345, 435
NcoI	CCATGG	1 cut(s)	156
NdeII	GATC	9 cut(s)	202, 228, 529, 741, 1040, 1531, 2038, 2080, 2901
NgoMIV	GCCGGC	1 cut(s)	348
NlaIV	GGNNCC	9 cut(s)	19, 531, 1455, 1582, 2082, 2216, 2620, 2734, 2805
NmuCI	GTSAC	6 cut(s)	196, 1045, 1057, 1256, 1617, 2596
NsiI	ATGCAT	2 cut(s)	1759, 1855
NspI	RCATGY	1 cut(s)	2102
NspV	TTCGAA	1 cut(s)	1780
PagI	TCATGA	2 cut(s)	2431, 3026
PceI	AGGCCT	1 cut(s)	1899
PciI	ACATGT	1 cut(s)	2098
PciSI	GCTCTTC	1 cut(s)	113
PctI	GAATGC	2 cut(s)	983, 2329
PdiI	GCCGGC	1 cut(s)	350
PdmI	GAANNNNTTC	1 cut(s)	2360
PfeI	GAWTC	9 cut(s)	168, 307, 355, 658, 834, 1663, 2659, 2672, 2726
PflFI	GACNNNGTC	2 cut(s)	2957, 2980
PflMI	CCANNNNNTGG	2 cut(s)	214, 2837
PkrI	GCNGC	8 cut(s)	36, 91, 225, 568, 1066, 1279, 1966, 2912
PleI	GAGTC	2 cut(s)	791, 1947
PpsI	GAGTC	2 cut(s)	791, 1947
Ppu21I	YACGTR	1 cut(s)	1556
PscI	ACATGT	1 cut(s)	2098
PshAI	GACNNNNGTC	1 cut(s)	368
PsiI	TTATAA	1 cut(s)	1247
Psp6I	CCWGG	3 cut(s)	1375, 1576, 2662
PspFI	CCCAGC	5 cut(s)	207, 615, 1697, 1906, 1979
PspGI	CCWGG	3 cut(s)	1375, 1576, 2662
PspN4I	GGNNCC	9 cut(s)	19, 531, 1455, 1582, 2082, 2216, 2620, 2734, 2805
PspPI	GGNCC	3 cut(s)	683, 1581, 1685
PstI	CTGCAG	1 cut(s)	571
PstNI	CAGNNNCTG	2 cut(s)	214, 1067
PsuI	RGATCY	3 cut(s)	529, 1040, 2080
PsyI	GACNNNGTC	2 cut(s)	2957, 2980
PvuII	CAGCTG	1 cut(s)	615
RigI	GGCCGGCC	1 cut(s)	352
RsaI	GTAC	7 cut(s)	251, 428, 1382, 1482, 2230, 2260, 2668
RsaNI	GTAC	7 cut(s)	250, 427, 1381, 1481, 2229, 2259, 2667
RseI	CAYNNNNRTG	2 cut(s)	2322, 2379
SalI	GTCGAC	1 cut(s)	361
SapI	GCTCTTC	1 cut(s)	113
SatI	GCNGC	8 cut(s)	35, 90, 224, 567, 1065, 1278, 1965, 2911
Sau3AI	GATC	9 cut(s)	202, 228, 529, 741, 1040, 1531, 2038, 2080, 2901
Sau96I	GGNCC	3 cut(s)	683, 1581, 1685
ScaI	AGTACT	1 cut(s)	251
SchI	GAGTC	2 cut(s)	791, 1947
ScrFI	CCNGG	5 cut(s)	345, 435, 1377, 1578, 2664
SduI	GDGCHC	5 cut(s)	22, 1616, 1872, 2967, 2990
SfaNI	GCATC	6 cut(s)	57, 1595, 1740, 1744, 1840, 2110
SfcI	CTRYAG	4 cut(s)	567, 1078, 1600, 2637
SfuI	TTCGAA	1 cut(s)	1780
SinI	GGWCC	2 cut(s)	683, 1581
SmiMI	CAYNNNNRTG	2 cut(s)	2322, 2379
SmlI	CTYRAG	1 cut(s)	2011
SmoI	CTYRAG	1 cut(s)	2011
SseBI	AGGCCT	1 cut(s)	1899
SspI	AATATT	1 cut(s)	1540
SspMI	CTAG	9 cut(s)	303, 585, 1151, 1388, 1515, 1887, 2091, 2567, 2646
StuI	AGGCCT	1 cut(s)	1899
StyD4I	CCNGG	5 cut(s)	343, 433, 1375, 1576, 2662
StyI	CCWWGG	4 cut(s)	156, 302, 2799, 2857
TaaI	ACNGT	5 cut(s)	679, 1015, 1991, 2253, 2278
TaiI	ACGT	5 cut(s)	98, 1558, 1619, 2008, 2981
TaqI	TCGA	8 cut(s)	166, 362, 766, 1317, 1780, 2628, 2893, 3006
TaqII	GACCGA	1 cut(s)	700
TatI	WGTACW	3 cut(s)	249, 426, 1480
TauI	GCSGC	5 cut(s)	92, 226, 1067, 1280, 2913
TfiI	GAWTC	9 cut(s)	168, 307, 355, 658, 834, 1663, 2659, 2672, 2726
TscAI	CASTG	5 cut(s)	328, 472, 1996, 2293, 2358
TseFI	GTSAC	6 cut(s)	196, 1045, 1057, 1256, 1617, 2596
TseI	GCWGC	3 cut(s)	34, 566, 1964
Tsp45I	GTSAC	6 cut(s)	196, 1045, 1057, 1256, 1617, 2596
TspGWI	ACGGA	5 cut(s)	348, 651, 1250, 2207, 2889
TspRI	CASTG	5 cut(s)	328, 472, 1996, 2293, 2358
Tth111I	GACNNNGTC	2 cut(s)	2957, 2980
Van91I	CCANNNNNTGG	2 cut(s)	214, 2837
Vha464I	CTTAAG	1 cut(s)	2011
VpaK11BI	GGWCC	2 cut(s)	683, 1581
XapI	RAATTY	6 cut(s)	542, 549, 635, 1651, 1803, 2456
XbaI	TCTAGA	1 cut(s)	1150
XceI	RCATGY	1 cut(s)	2102
XcmI	CCANNNNNNNNNTGG	3 cut(s)	328, 612, 2158
XmaJI	CCTAGG	1 cut(s)	302
XmiI	GTMKAC	1 cut(s)	362
XmnI	GAANNNNTTC	1 cut(s)	2360
XspI	CTAG	9 cut(s)	303, 585, 1151, 1388, 1515, 1887, 2091, 2567, 2646
ZraI	GACGTC	1 cut(s)	2979
ZrmI	AGTACT	1 cut(s)	251
Zsp2I	ATGCAT	2 cut(s)	1759, 1855

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.