Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0000771

Physical Location & Seq

Genomic Coordinates Reverse (-)

9691848 .. 9697323

Gene Structure 5476 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g17010.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2925 bp

ATGAATTCACTCACCGGTTTTCCTCTACTGCTCGAACAATTTAAGGCTCTGTTCATCAAGAACCTCCTCCTCGCATGGCGGAACAAGACCGCCACCTTTCTCCAGCTCTTCTCTTCCCTCTTCTTCATCCTCCTCATCTTCTGCTTCCAGAAGGCCGACGACATTCAGACCAGGTCTTCCTCCGCCTACCAGAGCGTCACGGATCCTCAGCCGCTCGTTGCGCAGCCGATCCCGCCCTGCGAGGACAAGTTCTCTATCAAAAAGCCGTGTTATGATTTCGTGTGGAGTGGAGATCAGAGCTCTAGCAGGATTCGGAGCATTGTCAGTGCTATAATGGCTAACAATCCCAACAGGCCAATTCCCGCAAGCAAGGTCAAATCGTTTAGAACCCCAGCTGAAGTGGATGAATGGCTGTATAACAATCCTTTGTACTGCCCAGGAGCTTTGCATTTTGTGGAAAGAAACGCCACTGTGATTAGCTATGGCCTGCAGACTAATTCTACTTCTGTTAAAAAACGAGGGCAAACTGAGAATCCCACATTCAAGTTTCAAATTCCACTTCAGATTGCTGCCGAGCGTGAGATAGCTAGGTCTCTAATTGGAGATTCGAAACTTAGCTGGGTTGTTGCATTCAAGGAATTTGCACATCCTGCAATGATGAAGCCGCCTTCTGCAATGAATGACATAGGACCACGGTTTTTTTTCGCTGCTGCCATGTTTGGTTTTGTGTTTCAAATGACTTCCTTGGTCACAGAGAAAGAACTTAAGCTGCGGCAGGCGATGACAATGATGGGCCTTTATGATAGTGCATACTGGCTCTCTTGGCTCGCATGGGAGGGACTGATTACACTACTCTCATCTCTTTTCACAGTTCTCTTTGGAATGATTTTTCAGTTTAGTTTTTTCTTGCACAACAGCTTTGCAGTCGTATTCCTTGTCTTCTATCTTTTCCAACTCAATATGATTGGTTTTGCCTTTATGTTATCGGCCTTCATAAAAAAGTCATCTTCAACCACAACTGTCGGTTTCTCCATCTATACTGTTGGCTATGTAACCCAGGTAGCTGCAGACAGCATCTACTCTAAAGAAGTCTCTAGGACTAAGCGAAACTTGTGGTCTCTATTCTCACCCAGTCTTCTTTCTCAAGCTCTATCTATACTCAATGAGGCAACATCCACATCTAAAAAGACTGGGATTAGCTGGAGTAGAACGGCAAACTGTAAACCAGGAGATGAAGATTGTGTTATGACAATTAATGACATATATGTATGGCTGACGGCTACATTCTTCCTCTGGTTGGTATTGGCTATCTACTTCGATAATATCATCCCAAATGTATCTGGTGTGAGAAAATCAGTGTTTTACTTTTTGAAGCCAGGATACTGGACAGGGAAAAGTGGAAACAAAGTAGAAGAGGGTGGCATTTGTAGTTGGATAGGTTCAATTCCACCACCTGAGCATATTACTCCAGATGATGAAGATGTCCTGGAAGAGGAGAACATTGTTAAAGAGCAAGCTAAGGAAGGCACAGTTGGTCCAAACCTTGCAGTTCAGATACGTGGCCTTGTAAAAACATATCCTGGCCAAAGACATGGTTGCTGTCGTTCCAAGAGGACTCCACCATACCATGCTCTCAAGGGTTTATGGGTCAACTTTGCAAAGGATCAGTTGTTTTGTCTACTTGGACCCAATGGAGCTGGGAAAACCACAGCAATAAACTGTTTAACTGGCATTACACCAGTGACTGGAGGAGATGCCTTGATCTATGGACATTCTGCCCGAAGTTCTGTTGGCATGGCAAACATTCAAAAAATGATTGGAGTTTGTCCACAGTTTGATATTCTTTGGGATGCAATGTCCGGGCAAGAGCATCTCCACATCTTCGCTAGTATCAAAGGCCTACCTCCAGCATCAATAAAATTGGCTACTATGAAGTCACTGGAAGAGGTGAAACTTACTGATGCAGCCAAAATGAGAGCTGGTAGTTACAGTGGAGGAATGAAGCGTCGCCTGAGTGTTGCAATAGCCCTCATTGGTGATCCGAAGTTAGTTATCCTAGATGAACCGACAACCGGTATGGATCCAATATCTAGAAGGCATGTATGGGACATCATAGAGGATGCAAAGAAGGGTCGCGCAATTGTCCTCACCACTCACTCAATGGAAGAAGCTGACATTTTAGGTGACAGAATAGGAATCATGGCAAAGGGTAGGCTGCGCTGTATTGGAACTTCAATCAGACTGAAGTCACGATTTGGGACTGGTTTTGTTGCTAATGTGAGATTCAAAGAAAGCACAAATGGACAAGGGCCTCCATCTCCAAATGAGGATGAAGTTGCAACGTCTCAGCATGAAGCTGTGAAGCAGTTGTTTAAATATCGTTTGGATGTTTCACCAAAAGAAGAGACCAAAGCATATCTCACTTTTGTGATTCCTCATAATAGAGAGGAAATTTTGTCGAATTTTTTCGCGGAACTGCAAGATCGAGAAGATGAATTTGGCATAGCAGACATCCAACTTGGACTTGCAACTCTTGAAGAAGTTTTCCTAAACATAGCAAGGCAAGCAGAGCTGGAGAGTGCCACAGCTGAGCGGAGAATGGTTACTCTCACATTAACATCTGGAGTCTTGGTTCAGATACCTATAGGAGCTAGGTTTGTTGGGATCCCAGGAACAGAGTCTCCTGAGAATCCAAATGGGCTAATGGTAGAAGTTTTCTGGGAGCAAGATGATTCTGGAGCACTCTGCATATCTGGTCACTCGTCTGAAACCCCAATACCTCCTAATATCGCAGTTGAACTACTACCAACTTCAACTTCGCGCCGAAATTCGCTTGGCCGATCCAAACCAGTGAATGGTATTCTTCTTGACTCTGACCAAATTACTCAATCTTTAGGACCAAATGGCCATAGGCAAAGGACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006869 GO:0008150 GO:0010876 GO:0015399 GO:0015405 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0033036 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane_3 ABC_tran

Protein Analysis

975

Amino Acids

108.01

Weight (kDa)

8.45

Isoelectric Point (pI)

40.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC2_membrane_3	PF12698	233 - 436	3.8e-14	ABC-2 family transporter protein
ABC_tran	PF00005	546 - 691	2.8e-23	ABC transporter
AAA_21	PF13304	646 - 723	7.8e-10	AAA domain, putative AbiEii toxin, Type IV TA system

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47730 AT5G61690 AT5G61690 AT5G61730 AT5G61730
fragaria_vesca	FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_5g15280 FvH4_5g17010 FvH4_5g17010 FvH4_5g17010
malus_domestica	MD00G1160200.v1.1 MD11G1124700.v1.1
prunus_persica	Prupe.5G188400_v2.0.a1 Prupe.5G229500_v2.0.a1 Prupe.6G093200_v2.0.a1 Prupe.6G093200_v2.0.a1
pyrus_communis	pycom06g19960 pycom11g10520
rosa_chinensis	RchiOBHm_Chr5g0061021 RchiOBHm_Chr7g0178841 RchiOBHm_Chr7g0180781
rosa_laevigata	RLG00000005230 RLG00000005399 RLG00000005401 RLG00000005403 RLG00000005405 RLG00000035420
rosa_multiflora	Rmu_co8148594.1_g000001 Rmu_co8316781.1_g000001 Rmu_co8482325.1_g000001 Rmu_co8514565.1_g000001 Rmu_sc0000888.1_g000001 Rmu_sc0007457.1_g000010 Rmu_sc0026332.1_g000001 Rmu_ssc0000131.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019630 Rroxscaffold_3G00272530 Rroxscaffold_3G00274500
rosa_rugosa	Rorug01G0114900 Rorug01G0115000 Rorug05G0336100 Rorug06G0420200 Rorug06G0420200 Rorug06G0420300 Rorug06G0420300 Rorug06G0436000
rosa_samantha	Rh1BG106800 Rh5AG398400 Rh5BG411300 Rh5CG436300 Rh5DG425700 Rh7AG019700 Rh7AG037700 Rh7BG019100 Rh7BG037400 Rh7CG019800 Rh7CG039100 Rh7DG019700
rosa_wichuraiana	Rw5G037560 Rw7G001590 Rw7G003110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	222
AccB7I	CCANNNNNTGG	2 cut(s)	1745, 2855
AccBSI	CCGCTC	2 cut(s)	214, 2593
AccI	GTMKAC	1 cut(s)	1678
AccII	CGCG	3 cut(s)	2136, 2471, 2821
AcoI	YGGCCR	3 cut(s)	1582, 2836, 2905
AcsI	RAATTY	7 cut(s)	4, 552, 638, 2451, 2461, 2495, 2827
AcuI	CTGAAG	3 cut(s)	417, 545, 2264
AfaI	GTAC	1 cut(s)	431
AfiI	CCNNNNNNNGG	5 cut(s)	1297, 1492, 1745, 2072, 2855
AflII	CTTAAG	1 cut(s)	764
AgeI	ACCGGT	2 cut(s)	14, 2072
AjnI	CCWGG	8 cut(s)	170, 436, 1056, 1225, 1375, 1485, 1579, 2668
AjuI	GAANNNNNNNTTGG	6 cut(s)	1515, 1547, 2481, 2513, 2800, 2832
AleI	CACNNNNGTG	1 cut(s)	2426
AloI	GAACNNNNNNTCC	4 cut(s)	2616, 2648, 2665, 2697
Alw21I	GWGCWC	2 cut(s)	302, 2743
Alw26I	GTCTC	6 cut(s)	597, 1096, 1122, 2349, 2399, 2685
AlwNI	CAGNNNCTG	1 cut(s)	1745
ApeKI	GCWGC	8 cut(s)	223, 569, 707, 710, 769, 1064, 1964, 2215
ApoI	RAATTY	7 cut(s)	4, 552, 638, 2451, 2461, 2495, 2827
AseI	ATTAAT	1 cut(s)	1254
AsiGI	ACCGGT	2 cut(s)	14, 2072
Asp700I	GAANNNNTTC	1 cut(s)	2465
AspLEI	GCGC	4 cut(s)	223, 2138, 2220, 2823
AspS9I	GGNCC	7 cut(s)	689, 793, 1535, 1685, 2309, 2897, 2919
AsuC2I	CCSGG	1 cut(s)	1861
AsuHPI	GGTGA	7 cut(s)	4, 1119, 1960, 2048, 2140, 2195, 2385
AsuII	TTCGAA	1 cut(s)	608
AvaII	GGWCC	5 cut(s)	689, 1535, 1685, 2897, 2919
BalI	TGGCCA	2 cut(s)	1584, 2907
BamHI	GGATCC	3 cut(s)	202, 2080, 2664
BanII	GRGCYC	1 cut(s)	302
BarI	GAAGNNNNNNTAC	4 cut(s)	1364, 1396, 2215, 2247
BbsI	GAAGAC	3 cut(s)	168, 931, 1127
Bbv12I	GWGCWC	2 cut(s)	302, 2743
BbvCI	CCTCAGC	1 cut(s)	207
BbvI	GCAGC	8 cut(s)	235, 556, 694, 697, 756, 1051, 1976, 2202
BccI	CCATC	3 cut(s)	784, 1040, 2323
BceAI	ACGGC	3 cut(s)	250, 1227, 1293
BciT130I	CCWGG	8 cut(s)	172, 438, 1058, 1227, 1377, 1487, 1581, 2670
BciVI	GTATCC	1 cut(s)	1373
BcnI	CCSGG	1 cut(s)	1861
BcoDI	GTCTC	6 cut(s)	597, 1096, 1122, 2349, 2399, 2685
BfaI	CTAG	7 cut(s)	303, 588, 1095, 1887, 2057, 2091, 2652
BfmI	CTRYAG	3 cut(s)	488, 1065, 2643
BfrI	CTTAAG	1 cut(s)	764
BfuI	GTATCC	1 cut(s)	1373
BlpI	GCTNAGC	1 cut(s)	2589
Bme1390I	CCNGG	9 cut(s)	172, 438, 1058, 1227, 1377, 1487, 1581, 1861, 2670
Bme18I	GGWCC	5 cut(s)	689, 1535, 1685, 2897, 2919
BmgT120I	GGNCC	7 cut(s)	689, 793, 1535, 1685, 2309, 2897, 2919
BmiI	GGNNCC	4 cut(s)	204, 1687, 2082, 2666
BmrFI	CCNGG	9 cut(s)	172, 438, 1058, 1227, 1377, 1487, 1581, 1861, 2670
BmrI	ACTGGG	2 cut(s)	1125, 1200
BmsI	GCATC	7 cut(s)	1083, 1744, 1840, 1879, 1919, 1951, 2110
BmuI	ACTGGG	2 cut(s)	1125, 1200
BoxI	GACNNNNGTC	1 cut(s)	2245
BpiI	GAAGAC	3 cut(s)	168, 931, 1127
BpmI	CTGGAG	8 cut(s)	86, 1222, 1452, 1767, 1890, 2594, 2643, 2757
Bpu10I	CCTNAGC	3 cut(s)	207, 1455, 1518
Bpu1102I	GCTNAGC	1 cut(s)	2589
Bpu14I	TTCGAA	1 cut(s)	608
BpuEI	CTTGAG	2 cut(s)	1128, 1619
BpuMI	CCSGG	1 cut(s)	1861
BsaAI	YACGTR	1 cut(s)	1559
BsaI	GGTCTC	3 cut(s)	597, 1122, 2399
BsaJI	CCNNGG	5 cut(s)	436, 692, 744, 1056, 2668
BsaWI	WCCGGW	2 cut(s)	14, 2072
BsaXI	ACNNNNNCTCC	4 cut(s)	2616, 2646, 2665, 2695
Bsc4I	CCNNNNNNNGG	5 cut(s)	1297, 1492, 1745, 2072, 2855
Bse118I	RCCGGY	2 cut(s)	14, 2072
Bse3DI	GCAATG	3 cut(s)	660, 681, 1860
BseBI	CCWGG	8 cut(s)	172, 438, 1058, 1227, 1377, 1487, 1581, 2670
BseDI	CCNNGG	5 cut(s)	436, 692, 744, 1056, 2668
BseLI	CCNNNNNNNGG	5 cut(s)	1297, 1492, 1745, 2072, 2855
BseMI	GCAATG	3 cut(s)	660, 681, 1860
BseMII	CTCAG	7 cut(s)	221, 519, 1446, 2003, 2360, 2580, 2676
BseRI	GAGGAG	5 cut(s)	56, 59, 122, 1508, 1764
BseXI	GCAGC	8 cut(s)	235, 556, 694, 697, 756, 1051, 1976, 2202
BseYI	CCCAGC	3 cut(s)	391, 618, 1697
Bsh1236I	CGCG	3 cut(s)	2136, 2471, 2821
BshTI	ACCGGT	2 cut(s)	14, 2072
BsiHKAI	GWGCWC	2 cut(s)	302, 2743
BsiSI	CCGG	3 cut(s)	15, 1860, 2073
BslFI	GGGAC	3 cut(s)	852, 2120, 2272
BslI	CCNNNNNNNGG	5 cut(s)	1297, 1492, 1745, 2072, 2855
BsmAI	GTCTC	6 cut(s)	597, 1096, 1122, 2349, 2399, 2685
BsmBI	CGTCTC	1 cut(s)	2349
BsmFI	GGGAC	3 cut(s)	852, 2120, 2272
BsmI	GAATGC	1 cut(s)	629
Bso31I	GGTCTC	3 cut(s)	597, 1122, 2399
Bsp119I	TTCGAA	1 cut(s)	608
Bsp1286I	GDGCHC	2 cut(s)	302, 2743
Bsp1720I	GCTNAGC	1 cut(s)	2589
BspCNI	CTCAG	7 cut(s)	220, 520, 1447, 2004, 2359, 2581, 2677
BspFNI	CGCG	3 cut(s)	2136, 2471, 2821
BspLI	GGNNCC	4 cut(s)	204, 1687, 2082, 2666
BspMAI	CTGCAG	2 cut(s)	492, 1069
BspQI	GCTCTTC	1 cut(s)	113
BspT104I	TTCGAA	1 cut(s)	608
BspTI	CTTAAG	1 cut(s)	764
BspTNI	GGTCTC	3 cut(s)	597, 1122, 2399
BsrBI	CCGCTC	2 cut(s)	214, 2593
BsrDI	GCAATG	3 cut(s)	660, 681, 1860
BsrFI	RCCGGY	2 cut(s)	14, 2072
BssAI	RCCGGY	2 cut(s)	14, 2072
BssECI	CCNNGG	5 cut(s)	436, 692, 744, 1056, 2668
BssT1I	CCWWGG	1 cut(s)	744
Bst2UI	CCWGG	8 cut(s)	172, 438, 1058, 1227, 1377, 1487, 1581, 2670
Bst6I	CTCTTC	7 cut(s)	113, 118, 125, 1407, 1485, 1938, 2397
BstAFI	CTTAAG	1 cut(s)	764
BstAPI	GCANNNNNTGC	1 cut(s)	650
BstBAI	YACGTR	1 cut(s)	1559
BstBI	TTCGAA	1 cut(s)	608
BstC8I	GCNNGC	6 cut(s)	367, 488, 777, 828, 1515, 2565
BstDSI	CCRYGG	1 cut(s)	692
BstENI	CCTNNNNNAGG	1 cut(s)	1490
BstFNI	CGCG	3 cut(s)	2136, 2471, 2821
BstHHI	GCGC	4 cut(s)	223, 2138, 2220, 2823
BstMAI	GTCTC	6 cut(s)	597, 1096, 1122, 2349, 2399, 2685
BstMWI	GCNNNNNNNGC	7 cut(s)	220, 232, 335, 650, 823, 2564, 2569
BstNI	CCWGG	8 cut(s)	172, 438, 1058, 1227, 1377, 1487, 1581, 2670
BstNSI	RCATGY	1 cut(s)	2102
BstPAI	GACNNNNGTC	1 cut(s)	2245
BstSCI	CCNGG	9 cut(s)	170, 436, 1056, 1225, 1375, 1485, 1579, 1859, 2668
BstSFI	CTRYAG	3 cut(s)	488, 1065, 2643
BstUI	CGCG	3 cut(s)	2136, 2471, 2821
BstV1I	GCAGC	8 cut(s)	235, 556, 694, 697, 756, 1051, 1976, 2202
BstV2I	GAAGAC	3 cut(s)	168, 931, 1127
BstX2I	RGATCY	3 cut(s)	202, 2080, 2664
BstXI	CCANNNNNNTGG	2 cut(s)	1383, 1592
BstYI	RGATCY	3 cut(s)	202, 2080, 2664
BsuI	GTATCC	1 cut(s)	1373
BtgI	CCRYGG	1 cut(s)	692
BtgZI	GCGATG	1 cut(s)	794
BtsIMutI	CAGTG	7 cut(s)	331, 468, 1362, 1746, 1937, 1996, 2856
Cac8I	GCNNGC	6 cut(s)	367, 488, 777, 828, 1515, 2565
CaiI	CAGNNNCTG	1 cut(s)	1745
CfoI	GCGC	4 cut(s)	223, 2138, 2220, 2823
Cfr10I	RCCGGY	2 cut(s)	14, 2072
Cfr13I	GGNCC	7 cut(s)	689, 793, 1535, 1685, 2309, 2897, 2919
CseI	GACGC	2 cut(s)	184, 1994
CsiI	ACCWGGT	1 cut(s)	170
Csp6I	GTAC	1 cut(s)	430
CspAI	ACCGGT	2 cut(s)	14, 2072
CviAII	CATG	9 cut(s)	75, 715, 831, 1592, 1628, 1795, 2099, 2200, 2351
CviQI	GTAC	1 cut(s)	430
DraI	TTTAAA	1 cut(s)	2374
EaeI	YGGCCR	3 cut(s)	1582, 2836, 2905
Eam1104I	CTCTTC	7 cut(s)	113, 118, 125, 1407, 1485, 1938, 2397
EarI	CTCTTC	7 cut(s)	113, 118, 125, 1407, 1485, 1938, 2397
EciI	GGCGGA	2 cut(s)	94, 172
Ecl136II	GAGCTC	1 cut(s)	300
Eco130I	CCWWGG	1 cut(s)	744
Eco147I	AGGCCT	1 cut(s)	1899
Eco24I	GRGCYC	1 cut(s)	302
Eco31I	GGTCTC	3 cut(s)	597, 1122, 2399
Eco47I	GGWCC	5 cut(s)	689, 1535, 1685, 2897, 2919
Eco53kI	GAGCTC	1 cut(s)	300
Eco57I	CTGAAG	3 cut(s)	417, 545, 2264
EcoICRI	GAGCTC	1 cut(s)	300
EcoNI	CCTNNNNNAGG	1 cut(s)	1490
EcoO109I	RGGNCCY	2 cut(s)	2309, 2919
EcoRI	GAATTC	1 cut(s)	4
EcoRII	CCWGG	8 cut(s)	170, 436, 1056, 1225, 1375, 1485, 1579, 2668
EcoT14I	CCWWGG	1 cut(s)	744
EcoT38I	GRGCYC	1 cut(s)	302
ErhI	CCWWGG	1 cut(s)	744
Esp3I	CGTCTC	1 cut(s)	2349
FaeI	CATG	9 cut(s)	78, 718, 834, 1595, 1631, 1798, 2102, 2203, 2354
FalI	AAGNNNNNCTT	2 cut(s)	1094, 1126
FaqI	GGGAC	3 cut(s)	852, 2120, 2272
FatI	CATG	9 cut(s)	74, 714, 830, 1591, 1627, 1794, 2098, 2199, 2350
FauI	CCCGC	2 cut(s)	240, 370
FblI	GTMKAC	1 cut(s)	1678
FriOI	GRGCYC	1 cut(s)	302
FspBI	CTAG	7 cut(s)	303, 588, 1095, 1887, 2057, 2091, 2652
FspI	TGCGCA	1 cut(s)	222
GlaI	GCGC	4 cut(s)	222, 2137, 2219, 2822
GsaI	CCCAGC	3 cut(s)	395, 622, 1701
GsuI	CTGGAG	8 cut(s)	86, 1222, 1452, 1767, 1890, 2594, 2643, 2757
HapII	CCGG	3 cut(s)	15, 1860, 2073
HgaI	GACGC	2 cut(s)	184, 1994
HhaI	GCGC	4 cut(s)	223, 2138, 2220, 2823
Hin1II	CATG	9 cut(s)	78, 718, 834, 1595, 1631, 1798, 2102, 2203, 2354
Hin6I	GCGC	4 cut(s)	221, 2136, 2218, 2821
HinP1I	GCGC	4 cut(s)	221, 2136, 2218, 2821
HincII	GTYRAC	1 cut(s)	1651
HindII	GTYRAC	1 cut(s)	1651
HpaII	CCGG	3 cut(s)	15, 1860, 2073
HphI	GGTGA	7 cut(s)	4, 1119, 1960, 2048, 2140, 2195, 2385
Hpy166II	GTNNAC	4 cut(s)	1223, 1651, 1679, 1829
Hpy8I	GTNNAC	4 cut(s)	1223, 1651, 1679, 1829
Hpy99I	CGWCG	2 cut(s)	161, 2010
HpyAV	CCTTC	6 cut(s)	145, 678, 1000, 1517, 2088, 2122
HpyCH4IV	ACGT	2 cut(s)	1558, 2342
HpyF10VI	GCNNNNNNNGC	7 cut(s)	220, 232, 335, 650, 823, 2564, 2569
HpySE526I	ACGT	2 cut(s)	1558, 2342
Hsp92II	CATG	9 cut(s)	78, 718, 834, 1595, 1631, 1798, 2102, 2203, 2354
HspAI	GCGC	4 cut(s)	221, 2136, 2218, 2821
LguI	GCTCTTC	1 cut(s)	113
LmnI	GCTCC	6 cut(s)	315, 440, 1694, 2648, 2722, 2738
Lsp1109I	GCAGC	8 cut(s)	235, 556, 694, 697, 756, 1051, 1976, 2202
LweI	GCATC	7 cut(s)	1083, 1744, 1840, 1879, 1919, 1951, 2110
MabI	ACCWGGT	1 cut(s)	170
MaeI	CTAG	7 cut(s)	303, 588, 1095, 1887, 2057, 2091, 2652
MaeII	ACGT	2 cut(s)	1558, 2342
MbiI	CCGCTC	2 cut(s)	214, 2593
MfeI	CAATTG	1 cut(s)	2139
MflI	RGATCY	3 cut(s)	202, 2080, 2664
MhlI	GDGCHC	2 cut(s)	302, 2743
MlsI	TGGCCA	2 cut(s)	1584, 2907
MluNI	TGGCCA	2 cut(s)	1584, 2907
MlyI	GAGTC	4 cut(s)	1609, 2634, 2687, 2864
MmeI	TCCRAC	3 cut(s)	976, 1412, 2539
Mox20I	TGGCCA	2 cut(s)	1584, 2907
MroXI	GAANNNNTTC	1 cut(s)	2465
MscI	TGGCCA	2 cut(s)	1584, 2907
MseI	TTAA	8 cut(s)	42, 510, 765, 1254, 1506, 1724, 2373, 2615
MslI	CAYNNNNRTG	1 cut(s)	2426
Msp20I	TGGCCA	2 cut(s)	1584, 2907
MspA1I	CMGCKG	2 cut(s)	395, 2588
MspCI	CTTAAG	1 cut(s)	764
MspI	CCGG	3 cut(s)	15, 1860, 2073
MspR9I	CCNGG	9 cut(s)	172, 438, 1058, 1227, 1377, 1487, 1581, 1861, 2670
MunI	CAATTG	1 cut(s)	2139
Mva1269I	GAATGC	1 cut(s)	629
MvaI	CCWGG	8 cut(s)	172, 438, 1058, 1227, 1377, 1487, 1581, 2670
MvnI	CGCG	3 cut(s)	2136, 2471, 2821
MwoI	GCNNNNNNNGC	7 cut(s)	220, 232, 335, 650, 823, 2564, 2569
NciI	CCSGG	1 cut(s)	1861
NlaIII	CATG	9 cut(s)	78, 718, 834, 1595, 1631, 1798, 2102, 2203, 2354
NlaIV	GGNNCC	4 cut(s)	204, 1687, 2082, 2666
NmeAIII	GCCGAG	1 cut(s)	598
NmuCI	GTSAC	7 cut(s)	196, 748, 1741, 1935, 2183, 2247, 2756
NsbI	TGCGCA	1 cut(s)	222
NspI	RCATGY	1 cut(s)	2102
NspV	TTCGAA	1 cut(s)	608
OliI	CACNNNNGTG	1 cut(s)	2426
PceI	AGGCCT	1 cut(s)	1899
PciSI	GCTCTTC	1 cut(s)	113
PctI	GAATGC	1 cut(s)	629
PdmI	GAANNNNTTC	1 cut(s)	2465
PfeI	GAWTC	8 cut(s)	310, 532, 605, 2196, 2283, 2431, 2689, 2732
PflFI	GACNNNGTC	1 cut(s)	172
PflMI	CCANNNNNTGG	2 cut(s)	1745, 2855
PfoI	TCCNGGA	1 cut(s)	1485
PinAI	ACCGGT	2 cut(s)	14, 2072
PleI	GAGTC	4 cut(s)	1609, 2633, 2686, 2864
PpsI	GAGTC	4 cut(s)	1609, 2633, 2686, 2864
Ppu21I	YACGTR	1 cut(s)	1559
PpuMI	RGGWCCY	1 cut(s)	2919
PshAI	GACNNNNGTC	1 cut(s)	2245
PshBI	ATTAAT	1 cut(s)	1254
Psp124BI	GAGCTC	1 cut(s)	302
Psp5II	RGGWCCY	1 cut(s)	2919
Psp6I	CCWGG	8 cut(s)	170, 436, 1056, 1225, 1375, 1485, 1579, 2668
PspFI	CCCAGC	3 cut(s)	391, 618, 1697
PspGI	CCWGG	8 cut(s)	170, 436, 1056, 1225, 1375, 1485, 1579, 2668
PspN4I	GGNNCC	4 cut(s)	204, 1687, 2082, 2666
PspPI	GGNCC	7 cut(s)	689, 793, 1535, 1685, 2309, 2897, 2919
PspPPI	RGGWCCY	1 cut(s)	2919
PstI	CTGCAG	2 cut(s)	492, 1069
PstNI	CAGNNNCTG	1 cut(s)	1745
PsuI	RGATCY	3 cut(s)	202, 2080, 2664
PsyI	GACNNNGTC	1 cut(s)	172
PvuII	CAGCTG	2 cut(s)	395, 2588
RsaI	GTAC	1 cut(s)	431
RsaNI	GTAC	1 cut(s)	430
RseI	CAYNNNNRTG	1 cut(s)	2426
SacI	GAGCTC	1 cut(s)	302
SapI	GCTCTTC	1 cut(s)	113
SaqAI	TTAA	8 cut(s)	42, 510, 765, 1254, 1506, 1724, 2373, 2615
Sau96I	GGNCC	7 cut(s)	689, 793, 1535, 1685, 2309, 2897, 2919
SchI	GAGTC	4 cut(s)	1609, 2634, 2687, 2864
ScrFI	CCNGG	9 cut(s)	172, 438, 1058, 1227, 1377, 1487, 1581, 1861, 2670
SduI	GDGCHC	2 cut(s)	302, 2743
SexAI	ACCWGGT	1 cut(s)	170
SfaNI	GCATC	7 cut(s)	1083, 1744, 1840, 1879, 1919, 1951, 2110
SfcI	CTRYAG	3 cut(s)	488, 1065, 2643
SfuI	TTCGAA	1 cut(s)	608
SinI	GGWCC	5 cut(s)	689, 1535, 1685, 2897, 2919
SmiMI	CAYNNNNRTG	1 cut(s)	2426
SmlI	CTYRAG	3 cut(s)	764, 1143, 1634
SmoI	CTYRAG	3 cut(s)	764, 1143, 1634
SseBI	AGGCCT	1 cut(s)	1899
SspMI	CTAG	7 cut(s)	303, 588, 1095, 1887, 2057, 2091, 2652
SstI	GAGCTC	1 cut(s)	302
StuI	AGGCCT	1 cut(s)	1899
StyD4I	CCNGG	9 cut(s)	170, 436, 1056, 1225, 1375, 1485, 1579, 1859, 2668
StyI	CCWWGG	1 cut(s)	744
TaiI	ACGT	2 cut(s)	1561, 2345
TaqI	TCGA	5 cut(s)	33, 608, 1317, 2459, 2485
TatI	WGTACW	1 cut(s)	429
TauI	GCSGC	3 cut(s)	214, 667, 775
TfiI	GAWTC	8 cut(s)	310, 532, 605, 2196, 2283, 2431, 2689, 2732
Tru1I	TTAA	8 cut(s)	42, 510, 765, 1254, 1506, 1724, 2373, 2615
Tru9I	TTAA	8 cut(s)	42, 510, 765, 1254, 1506, 1724, 2373, 2615
TscAI	CASTG	7 cut(s)	331, 475, 1362, 1746, 1944, 1996, 2856
TseFI	GTSAC	7 cut(s)	196, 748, 1741, 1935, 2183, 2247, 2756
TseI	GCWGC	8 cut(s)	223, 569, 707, 710, 769, 1064, 1964, 2215
Tsp45I	GTSAC	7 cut(s)	196, 748, 1741, 1935, 2183, 2247, 2756
TspGWI	ACGGA	1 cut(s)	215
TspRI	CASTG	7 cut(s)	331, 475, 1362, 1746, 1944, 1996, 2856
Tth111I	GACNNNGTC	1 cut(s)	172
Van91I	CCANNNNNTGG	2 cut(s)	1745, 2855
Vha464I	CTTAAG	1 cut(s)	764
VpaK11BI	GGWCC	5 cut(s)	689, 1535, 1685, 2897, 2919
VspI	ATTAAT	1 cut(s)	1254
XagI	CCTNNNNNAGG	1 cut(s)	1490
XapI	RAATTY	7 cut(s)	4, 552, 638, 2451, 2461, 2495, 2827
XbaI	TCTAGA	1 cut(s)	2090
XceI	RCATGY	1 cut(s)	2102
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2158
XmiI	GTMKAC	1 cut(s)	1678
XmnI	GAANNNNTTC	1 cut(s)	2465
XspI	CTAG	7 cut(s)	303, 588, 1095, 1887, 2057, 2091, 2652

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.