Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0000771

Physical Location & Seq

Genomic Coordinates Reverse (-)

55880561 .. 55884497

Gene Structure 3937 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0420200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGGCTACATATTTCCAAAATTTAAGTAATCAAAATTTGTTGACCCCCTATCCAGGGGATGAGAAGCTTGCTTCTTATCCTGAACAGCCTAGTAACATGATGATGTATATGAATCAAGCTTCATATCCCGGATCCTACACCGATGTCTTGTCCGGTGGCTCTTTCTCCCCCAACAAATGTTCTGAGTCTGATGGTGGTAGGAATGAAATGATGTTTATTCCACCTACAAGTGTCCCGGTCAGAGATTGTGTGGGTGGGGATTCATTGATAGGGTCTCCTGATGGCAAACGTGGTATTCAGGATCATGGATTGTCTCTTAGCCTTGCCACACAAATTCCACCTGCAGTTTCTGTTCCTTCGTTTCAGTACCAGTATCTGAATTCAAGTCTCCCTTCGGTTTTGAGCACTTCTCAAATCCTAGGGAAGGGAGAATTTCAATGTAAAGGTGATGATTACAGCCAAAGTGACGAGTTTAGAAACTTTGAAAATTTGACATCTGGCTTATATGACTCTCTCAAAACACAGAATTTCTCCAATCCTATGTGCTCCATGGTCCCCAAAGAAATGCATTCCGAAGCATACTTGTATGACTCATTAGGTTTTTCAAAGTCTTTATTAAACACCAAGTACCTCAAGGCAGCTCAGCAATTGCTTGATGAAGTGGTAAATGTACGAAAGGCTTTGAAGCAGTCTAGATCGAACAAACATCAAAGAACAGACGGTTCGAAAGAGACTGACGGGATAAGAATGTCATCCGACCCTAGTGAGCCAAGCGCCGTATCTTCTGTTGAGTTATCACCAGTAGAAAGGCAGGATTTACAGAACAAGAAGACCAAACTTTTGTCCATGTTGGATGAGGTAGATAGAAGATACAAGCAATATTACCATCAAATGCAAAACGTGGTGGCATTTTTTGACAAGGCAGCTGGGAATGGGGCTGCCGGACCATACACAGCACTAGCTCTACAAGCAATTTCCCGTCATTTTCGCAGTTTGCATGATGCAATCAAGGGCCAGATTCAAGCGTCACAGAGAAGCCTGGGAGAGAAAGATACTCCATCAGATGCTCAAGGAGAAGTAATACCTCGCCTCCGTTACGTGGACCAGCAGCTCAGACAGCAGAGGGCATTTCAGCAGCATGGTGTAATGCAACATTCTTGGAGACCTCAAAGGGGACTTCCTGAAAGCTCTGTTGCAATCCTTCGCGCTTGGTTATTTGAGCACTTCCTTCTCCCTTACCCAAAGGATTCTGAAAAGGTTATGCTAGCAAGGCAGACTGGCTTAACCAGAAATCAGGTTGCCAACTGGTTTATTAATGCAAGGGTACGTCTTTGGAAGCCCATGATTGAGGAAATGTACAAAGAAGAATTTGGTGAAGAGATGGATTCGAAATCTTCACCAGAAAATGTGCTAAAAGAAGCCAGAGTTGAATTCTCAGCATCTGAGGATAGGAGAGATGAGTTGCGGGAAAGCCTGATTTCTACAACTGCTGATAGTATTGAACCAGGGCAACTGCATGACTCGAAGTCTGGAATAACAAAGTTACAAGATCATGGTCAAAGGCCTAATGCAGACGACCGTAGTGTTTATCTTGATGCAAACGAGAATGCTGTTGCTACATATGATATGTCAGGGTTGGGGAATGCAGTTGGTAGTGAGGTCTCACTTGCATTGGAGTTGCGGCATTGTGAGGAACATGATGGATTTCCAGCACCTAATGGATCCGAAGTAAGAGGTAACGATCCAGAAGCTTCTTTGGATTGTTATTATGGAGATCCAGGGCAGCAGCAATACAGGTTTGGCAATTCACACCTGTTACATGATTTTGTAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006869 GO:0008150 GO:0010876 GO:0015399 GO:0015405 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0033036 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane_3 ABC_tran

Protein Analysis

611

Amino Acids

68.38

Weight (kDa)

5.43

Isoelectric Point (pI)

48.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	205 - 336	9.7e-47	Associated with HOX
Homeobox_KN	PF05920	404 - 443	7.8e-18	Homeobox KN domain
Homeodomain	PF00046	412 - 443	2.6e-06	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47730 AT5G61690 AT5G61690 AT5G61730 AT5G61730
fragaria_vesca	FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_5g15280 FvH4_5g17010 FvH4_5g17010 FvH4_5g17010
malus_domestica	MD00G1160200.v1.1 MD11G1124700.v1.1
prunus_persica	Prupe.5G188400_v2.0.a1 Prupe.5G229500_v2.0.a1 Prupe.6G093200_v2.0.a1 Prupe.6G093200_v2.0.a1
pyrus_communis	pycom06g19960 pycom11g10520
rosa_chinensis	RchiOBHm_Chr5g0061021 RchiOBHm_Chr7g0178841 RchiOBHm_Chr7g0180781
rosa_laevigata	RLG00000005230 RLG00000005399 RLG00000005401 RLG00000005403 RLG00000005405 RLG00000035420
rosa_multiflora	Rmu_co8148594.1_g000001 Rmu_co8316781.1_g000001 Rmu_co8482325.1_g000001 Rmu_co8514565.1_g000001 Rmu_sc0000888.1_g000001 Rmu_sc0007457.1_g000010 Rmu_sc0026332.1_g000001 Rmu_ssc0000131.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019630 Rroxscaffold_3G00272530 Rroxscaffold_3G00274500
rosa_rugosa	Rorug01G0114900 Rorug01G0115000 Rorug05G0336100 Rorug06G0420200 Rorug06G0420200 Rorug06G0420300 Rorug06G0420300 Rorug06G0436000
rosa_samantha	Rh1BG106800 Rh5AG398400 Rh5BG411300 Rh5CG436300 Rh5DG425700 Rh7AG019700 Rh7AG037700 Rh7BG019100 Rh7BG037400 Rh7CG019800 Rh7CG039100 Rh7DG019700
rosa_wichuraiana	Rw5G037560 Rw7G001590 Rw7G003110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	349
Acc36I	ACCTGC	1 cut(s)	349
AccII	CGCG	1 cut(s)	1206
AciI	CCGC	2 cut(s)	1465, 1681
AclWI	GGATC	7 cut(s)	126, 139, 309, 1716, 1729, 1736, 1769
AcsI	RAATTY	9 cut(s)	19, 34, 333, 379, 431, 487, 526, 1367, 1430
AfaI	GTAC	5 cut(s)	368, 629, 672, 1326, 1358
AfiI	CCNNNNNNNGG	5 cut(s)	53, 54, 424, 1099, 1172
AgsI	TTSAA	8 cut(s)	384, 437, 485, 606, 685, 1022, 1430, 1502
AhdI	GACNNNNNGTC	1 cut(s)	1525
AjnI	CCWGG	4 cut(s)	52, 1038, 1504, 1777
AluBI	AGCT	8 cut(s)	67, 119, 641, 926, 962, 1111, 1188, 1751
AluI	AGCT	8 cut(s)	67, 119, 641, 926, 962, 1111, 1188, 1751
Alw21I	GWGCWC	3 cut(s)	407, 548, 1224
Alw26I	GTCTC	6 cut(s)	279, 318, 392, 725, 1156, 1666
AlwI	GGATC	7 cut(s)	126, 139, 309, 1716, 1729, 1736, 1769
AlwNI	CAGNNNCTG	3 cut(s)	350, 376, 1442
AoxI	GGCC	2 cut(s)	1012, 1562
ApeKI	GCWGC	7 cut(s)	638, 923, 938, 1108, 1135, 1783, 1786
ApoI	RAATTY	9 cut(s)	19, 34, 333, 379, 431, 487, 526, 1367, 1430
ArsI	GACNNNNNNTTYG	2 cut(s)	823, 855
AseI	ATTAAT	1 cut(s)	1314
AspA2I	CCTAGG	1 cut(s)	418
AspLEI	GCGC	2 cut(s)	776, 1208
AspS9I	GGNCC	4 cut(s)	553, 944, 1012, 1102
AsuC2I	CCSGG	2 cut(s)	129, 236
AsuHPI	GGTGA	4 cut(s)	458, 789, 1385, 1389
AsuII	TTCGAA	2 cut(s)	725, 1388
AsuNHI	GCTAGC	1 cut(s)	1264
AvaII	GGWCC	3 cut(s)	553, 944, 1102
AvrII	CCTAGG	1 cut(s)	418
BamHI	GGATCC	2 cut(s)	131, 1721
BbsI	GAAGAC	1 cut(s)	836
Bbv12I	GWGCWC	3 cut(s)	407, 548, 1224
BbvI	GCAGC	7 cut(s)	650, 925, 935, 1120, 1147, 1795, 1798
BccI	CCATC	6 cut(s)	185, 275, 894, 1066, 1375, 1694
BceAI	ACGGC	1 cut(s)	761
BciT130I	CCWGG	4 cut(s)	54, 1040, 1506, 1779
BcnI	CCSGG	2 cut(s)	129, 236
BcoDI	GTCTC	6 cut(s)	279, 318, 392, 725, 1156, 1666
BfaI	CTAG	6 cut(s)	90, 419, 693, 762, 959, 1265
BfmI	CTRYAG	1 cut(s)	342
BfoI	RGCGCY	1 cut(s)	777
BfuAI	ACCTGC	1 cut(s)	349
BisI	GCNGC	8 cut(s)	639, 924, 939, 1109, 1136, 1682, 1784, 1787
BlnI	CCTAGG	1 cut(s)	418
BlpI	GCTNAGC	1 cut(s)	642
BlsI	GCNGC	8 cut(s)	640, 925, 940, 1110, 1137, 1683, 1785, 1788
Bme1390I	CCNGG	6 cut(s)	54, 129, 236, 1040, 1506, 1779
Bme18I	GGWCC	3 cut(s)	553, 944, 1102
BmeRI	GACNNNNNGTC	1 cut(s)	1525
BmgT120I	GGNCC	4 cut(s)	553, 944, 1012, 1102
BmiI	GGNNCC	3 cut(s)	133, 555, 1723
BmrFI	CCNGG	6 cut(s)	54, 129, 236, 1040, 1506, 1779
BmsI	GCATC	4 cut(s)	991, 1054, 1448, 1585
BmtI	GCTAGC	1 cut(s)	1268
BpiI	GAAGAC	1 cut(s)	836
BplI	GAGNNNNNCTC	2 cut(s)	394, 426
Bpu1102I	GCTNAGC	1 cut(s)	642
Bpu14I	TTCGAA	2 cut(s)	725, 1388
BpuEI	CTTGAG	2 cut(s)	617, 1053
BpuMI	CCSGG	2 cut(s)	129, 236
BsaAI	YACGTR	1 cut(s)	1099
BsaI	GGTCTC	3 cut(s)	279, 1156, 1666
BsaJI	CCNNGG	6 cut(s)	53, 418, 549, 1039, 1505, 1778
BsaWI	WCCGGW	1 cut(s)	152
BsaXI	ACNNNNNCTCC	2 cut(s)	1074, 1104
Bsc4I	CCNNNNNNNGG	5 cut(s)	53, 54, 424, 1099, 1172
Bse1I	ACTGG	4 cut(s)	370, 800, 1282, 1310
BseBI	CCWGG	4 cut(s)	54, 1040, 1506, 1779
BseDI	CCNNGG	6 cut(s)	53, 418, 549, 1039, 1505, 1778
BseGI	GGATG	3 cut(s)	64, 752, 859
BseLI	CCNNNNNNNGG	5 cut(s)	53, 54, 424, 1099, 1172
BseMII	CTCAG	5 cut(s)	174, 656, 1126, 1434, 1449
BseNI	ACTGG	4 cut(s)	370, 800, 1282, 1310
BseXI	GCAGC	7 cut(s)	650, 925, 935, 1120, 1147, 1795, 1798
BseYI	CCCAGC	1 cut(s)	926
Bsh1236I	CGCG	1 cut(s)	1206
Bsh1285I	CGRYCG	1 cut(s)	1579
BshFI	GGCC	2 cut(s)	1014, 1564
BsiEI	CGRYCG	1 cut(s)	1579
BsiHKAI	GWGCWC	3 cut(s)	407, 548, 1224
BsiSI	CCGG	4 cut(s)	129, 153, 236, 942
BslFI	GGGAC	3 cut(s)	218, 539, 1188
BslI	CCNNNNNNNGG	5 cut(s)	53, 54, 424, 1099, 1172
BsmAI	GTCTC	6 cut(s)	279, 318, 392, 725, 1156, 1666
BsmFI	GGGAC	3 cut(s)	218, 539, 1188
BsmI	GAATGC	3 cut(s)	568, 1612, 1648
BsnI	GGCC	2 cut(s)	1014, 1564
Bso31I	GGTCTC	3 cut(s)	279, 1156, 1666
Bsp119I	TTCGAA	2 cut(s)	725, 1388
Bsp1286I	GDGCHC	3 cut(s)	407, 548, 1224
Bsp1407I	TGTACA	1 cut(s)	1356
Bsp143I	GATC	7 cut(s)	131, 301, 695, 1549, 1721, 1741, 1774
Bsp1720I	GCTNAGC	1 cut(s)	642
Bsp19I	CCATGG	1 cut(s)	549
BspACI	CCGC	2 cut(s)	1465, 1681
BspANI	GGCC	2 cut(s)	1014, 1564
BspCNI	CTCAG	5 cut(s)	175, 655, 1125, 1435, 1448
BspFNI	CGCG	1 cut(s)	1206
BspLI	GGNNCC	3 cut(s)	133, 555, 1723
BspMAI	CTGCAG	1 cut(s)	346
BspMI	ACCTGC	1 cut(s)	349
BspOI	GCTAGC	1 cut(s)	1268
BspPI	GGATC	7 cut(s)	126, 139, 309, 1716, 1729, 1736, 1769
BspT104I	TTCGAA	2 cut(s)	725, 1388
BspTNI	GGTCTC	3 cut(s)	279, 1156, 1666
BsrGI	TGTACA	1 cut(s)	1356
BsrI	ACTGG	4 cut(s)	370, 800, 1282, 1310
BssECI	CCNNGG	6 cut(s)	53, 418, 549, 1039, 1505, 1778
BssMI	GATC	7 cut(s)	131, 301, 695, 1549, 1721, 1741, 1774
BssT1I	CCWWGG	2 cut(s)	418, 549
Bst2UI	CCWGG	4 cut(s)	54, 1040, 1506, 1779
Bst4CI	ACNGT	2 cut(s)	722, 1580
Bst6I	CTCTTC	1 cut(s)	1371
BstAUI	TGTACA	1 cut(s)	1356
BstBAI	YACGTR	1 cut(s)	1099
BstBI	TTCGAA	2 cut(s)	725, 1388
BstC8I	GCNNGC	2 cut(s)	69, 1266
BstDEI	CTNAG	6 cut(s)	183, 317, 642, 1112, 1435, 1443
BstDSI	CCRYGG	1 cut(s)	549
BstENI	CCTNNNNNAGG	1 cut(s)	422
BstF5I	GGATG	3 cut(s)	64, 752, 859
BstFNI	CGCG	1 cut(s)	1206
BstH2I	RGCGCY	1 cut(s)	777
BstHHI	GCGC	2 cut(s)	776, 1208
BstKTI	GATC	7 cut(s)	134, 304, 698, 1552, 1724, 1744, 1777
BstMAI	GTCTC	6 cut(s)	279, 318, 392, 725, 1156, 1666
BstMBI	GATC	7 cut(s)	131, 301, 695, 1549, 1721, 1741, 1774
BstMCI	CGRYCG	1 cut(s)	1579
BstMWI	GCNNNNNNNGC	3 cut(s)	968, 1117, 1270
BstNI	CCWGG	4 cut(s)	54, 1040, 1506, 1779
BstSCI	CCNGG	6 cut(s)	52, 127, 234, 1038, 1504, 1777
BstSFI	CTRYAG	1 cut(s)	342
BstUI	CGCG	1 cut(s)	1206
BstV1I	GCAGC	7 cut(s)	650, 925, 935, 1120, 1147, 1795, 1798
BstV2I	GAAGAC	1 cut(s)	836
BstX2I	RGATCY	3 cut(s)	131, 1721, 1774
BstYI	RGATCY	3 cut(s)	131, 1721, 1774
BsuRI	GGCC	2 cut(s)	1014, 1564
BtgI	CCRYGG	1 cut(s)	549
BtsCI	GGATG	3 cut(s)	64, 752, 859
BveI	ACCTGC	1 cut(s)	349
Cac8I	GCNNGC	2 cut(s)	69, 1266
CaiI	CAGNNNCTG	3 cut(s)	350, 376, 1442
CfoI	GCGC	2 cut(s)	776, 1208
Cfr13I	GGNCC	4 cut(s)	553, 944, 1012, 1102
CseI	GACGC	1 cut(s)	1014
Csp6I	GTAC	5 cut(s)	367, 628, 671, 1325, 1357
CviQI	GTAC	5 cut(s)	367, 628, 671, 1325, 1357
DdeI	CTNAG	6 cut(s)	183, 317, 642, 1112, 1435, 1443
DpnI	GATC	7 cut(s)	133, 303, 697, 1551, 1723, 1743, 1776
DpnII	GATC	7 cut(s)	131, 301, 695, 1549, 1721, 1741, 1774
DriI	GACNNNNNGTC	1 cut(s)	1525
Eam1104I	CTCTTC	1 cut(s)	1371
Eam1105I	GACNNNNNGTC	1 cut(s)	1525
EarI	CTCTTC	1 cut(s)	1371
Eco130I	CCWWGG	2 cut(s)	418, 549
Eco147I	AGGCCT	1 cut(s)	1564
Eco31I	GGTCTC	3 cut(s)	279, 1156, 1666
Eco47I	GGWCC	3 cut(s)	553, 944, 1102
EcoNI	CCTNNNNNAGG	1 cut(s)	422
EcoRI	GAATTC	2 cut(s)	379, 1430
EcoRII	CCWGG	4 cut(s)	52, 1038, 1504, 1777
EcoT14I	CCWWGG	2 cut(s)	418, 549
EcoT22I	ATGCAT	1 cut(s)	570
ErhI	CCWWGG	2 cut(s)	418, 549
FalI	AAGNNNNNCTT	2 cut(s)	376, 408
FaqI	GGGAC	3 cut(s)	218, 539, 1188
FauI	CCCGC	1 cut(s)	1458
FauNDI	CATATG	1 cut(s)	1621
Fnu4HI	GCNGC	8 cut(s)	639, 924, 939, 1109, 1136, 1682, 1784, 1787
FokI	GGATG	3 cut(s)	71, 739, 866
Fsp4HI	GCNGC	8 cut(s)	639, 924, 939, 1109, 1136, 1682, 1784, 1787
FspBI	CTAG	6 cut(s)	90, 419, 693, 762, 959, 1265
GlaI	GCGC	2 cut(s)	775, 1207
GluI	GCNGC	8 cut(s)	639, 924, 939, 1109, 1136, 1682, 1784, 1787
GsaI	CCCAGC	1 cut(s)	930
HaeII	RGCGCY	1 cut(s)	777
HaeIII	GGCC	2 cut(s)	1014, 1564
HapII	CCGG	4 cut(s)	129, 153, 236, 942
HgaI	GACGC	1 cut(s)	1014
HhaI	GCGC	2 cut(s)	776, 1208
Hin6I	GCGC	2 cut(s)	774, 1206
HinP1I	GCGC	2 cut(s)	774, 1206
HincII	GTYRAC	1 cut(s)	42
HindII	GTYRAC	1 cut(s)	42
HindIII	AAGCTT	3 cut(s)	65, 117, 1749
HinfI	GANTC	9 cut(s)	112, 185, 260, 509, 590, 1018, 1247, 1385, 1520
HpaII	CCGG	4 cut(s)	129, 153, 236, 942
HphI	GGTGA	4 cut(s)	458, 789, 1385, 1389
Hpy166II	GTNNAC	2 cut(s)	42, 1102
Hpy188III	TCNNGA	8 cut(s)	80, 278, 299, 693, 1181, 1530, 1592, 1745
Hpy8I	GTNNAC	2 cut(s)	42, 1102
HpyAV	CCTTC	5 cut(s)	366, 402, 418, 1211, 1238
HpyCH4III	ACNGT	2 cut(s)	722, 1580
HpyCH4IV	ACGT	4 cut(s)	289, 900, 1098, 1327
HpyF10VI	GCNNNNNNNGC	3 cut(s)	968, 1117, 1270
HpyF3I	CTNAG	6 cut(s)	183, 317, 642, 1112, 1435, 1443
HpySE526I	ACGT	4 cut(s)	289, 900, 1098, 1327
HspAI	GCGC	2 cut(s)	774, 1206
Kzo9I	GATC	7 cut(s)	131, 301, 695, 1549, 1721, 1741, 1774
LmnI	GCTCC	1 cut(s)	551
Lsp1109I	GCAGC	7 cut(s)	650, 925, 935, 1120, 1147, 1795, 1798
LweI	GCATC	4 cut(s)	991, 1054, 1448, 1585
MaeI	CTAG	6 cut(s)	90, 419, 693, 762, 959, 1265
MaeII	ACGT	4 cut(s)	289, 900, 1098, 1327
MaeIII	GTNAC	7 cut(s)	92, 464, 1026, 1094, 1542, 1736, 1815
MalI	GATC	7 cut(s)	133, 303, 697, 1551, 1723, 1743, 1776
MboI	GATC	7 cut(s)	131, 301, 695, 1549, 1721, 1741, 1774
MboII	GAAGA	6 cut(s)	774, 841, 879, 1376, 1386, 1388
MfeI	CAATTG	1 cut(s)	647
MflI	RGATCY	3 cut(s)	131, 1721, 1774
MhlI	GDGCHC	3 cut(s)	407, 548, 1224
MlyI	GAGTC	4 cut(s)	194, 503, 584, 1514
MmeI	TCCRAC	2 cut(s)	780, 831
Mph1103I	ATGCAT	1 cut(s)	570
MseI	TTAA	4 cut(s)	23, 617, 1283, 1314
MslI	CAYNNNNRTG	1 cut(s)	101
MspA1I	CMGCKG	1 cut(s)	926
MspI	CCGG	4 cut(s)	129, 153, 236, 942
MspR9I	CCNGG	6 cut(s)	54, 129, 236, 1040, 1506, 1779
MunI	CAATTG	1 cut(s)	647
Mva1269I	GAATGC	3 cut(s)	568, 1612, 1648
MvaI	CCWGG	4 cut(s)	54, 1040, 1506, 1779
MvnI	CGCG	1 cut(s)	1206
MwoI	GCNNNNNNNGC	3 cut(s)	968, 1117, 1270
NciI	CCSGG	2 cut(s)	129, 236
NcoI	CCATGG	1 cut(s)	549
NdeI	CATATG	1 cut(s)	1621
NdeII	GATC	7 cut(s)	131, 301, 695, 1549, 1721, 1741, 1774
NheI	GCTAGC	1 cut(s)	1264
NlaIV	GGNNCC	3 cut(s)	133, 555, 1723
NmuCI	GTSAC	2 cut(s)	464, 1026
NsiI	ATGCAT	1 cut(s)	570
NspV	TTCGAA	2 cut(s)	725, 1388
PaqCI	CACCTGC	1 cut(s)	349
PceI	AGGCCT	1 cut(s)	1564
PctI	GAATGC	3 cut(s)	568, 1612, 1648
PfeI	GAWTC	5 cut(s)	112, 260, 1018, 1247, 1385
PfoI	TCCNGGA	1 cut(s)	127
PkrI	GCNGC	8 cut(s)	640, 925, 940, 1110, 1137, 1683, 1785, 1788
PleI	GAGTC	4 cut(s)	193, 503, 584, 1514
PpsI	GAGTC	4 cut(s)	193, 503, 584, 1514
Ppu21I	YACGTR	1 cut(s)	1099
PshBI	ATTAAT	1 cut(s)	1314
Psp6I	CCWGG	4 cut(s)	52, 1038, 1504, 1777
PspFI	CCCAGC	1 cut(s)	926
PspGI	CCWGG	4 cut(s)	52, 1038, 1504, 1777
PspN4I	GGNNCC	3 cut(s)	133, 555, 1723
PspPI	GGNCC	4 cut(s)	553, 944, 1012, 1102
PstI	CTGCAG	1 cut(s)	346
PstNI	CAGNNNCTG	3 cut(s)	350, 376, 1442
PsuI	RGATCY	3 cut(s)	131, 1721, 1774
PvuII	CAGCTG	1 cut(s)	926
RsaI	GTAC	5 cut(s)	368, 629, 672, 1326, 1358
RsaNI	GTAC	5 cut(s)	367, 628, 671, 1325, 1357
RseI	CAYNNNNRTG	1 cut(s)	101
SaqAI	TTAA	4 cut(s)	23, 617, 1283, 1314
SatI	GCNGC	8 cut(s)	639, 924, 939, 1109, 1136, 1682, 1784, 1787
Sau3AI	GATC	7 cut(s)	131, 301, 695, 1549, 1721, 1741, 1774
Sau96I	GGNCC	4 cut(s)	553, 944, 1012, 1102
SchI	GAGTC	4 cut(s)	194, 503, 584, 1514
ScrFI	CCNGG	6 cut(s)	54, 129, 236, 1040, 1506, 1779
SduI	GDGCHC	3 cut(s)	407, 548, 1224
SfaNI	GCATC	4 cut(s)	991, 1054, 1448, 1585
SfcI	CTRYAG	1 cut(s)	342
SfuI	TTCGAA	2 cut(s)	725, 1388
SinI	GGWCC	3 cut(s)	553, 944, 1102
SmiMI	CAYNNNNRTG	1 cut(s)	101
SmlI	CTYRAG	2 cut(s)	632, 1068
SmoI	CTYRAG	2 cut(s)	632, 1068
SseBI	AGGCCT	1 cut(s)	1564
SsiI	CCGC	2 cut(s)	1465, 1681
SspI	AATATT	1 cut(s)	881
SspMI	CTAG	6 cut(s)	90, 419, 693, 762, 959, 1265
StuI	AGGCCT	1 cut(s)	1564
StyD4I	CCNGG	6 cut(s)	52, 127, 234, 1038, 1504, 1777
StyI	CCWWGG	2 cut(s)	418, 549
TaaI	ACNGT	2 cut(s)	722, 1580
TaiI	ACGT	4 cut(s)	292, 903, 1101, 1330
TaqI	TCGA	4 cut(s)	698, 725, 1388, 1523
TatI	WGTACW	1 cut(s)	1356
TauI	GCSGC	1 cut(s)	1684
TfiI	GAWTC	5 cut(s)	112, 260, 1018, 1247, 1385
Tru1I	TTAA	4 cut(s)	23, 617, 1283, 1314
Tru9I	TTAA	4 cut(s)	23, 617, 1283, 1314
TseFI	GTSAC	2 cut(s)	464, 1026
TseI	GCWGC	7 cut(s)	638, 923, 938, 1108, 1135, 1783, 1786
Tsp45I	GTSAC	2 cut(s)	464, 1026
TspDTI	ATGAA	5 cut(s)	111, 125, 219, 252, 672
TspGWI	ACGGA	1 cut(s)	1082
VpaK11BI	GGWCC	3 cut(s)	553, 944, 1102
VspI	ATTAAT	1 cut(s)	1314
XagI	CCTNNNNNAGG	1 cut(s)	422
XapI	RAATTY	9 cut(s)	19, 34, 333, 379, 431, 487, 526, 1367, 1430
XbaI	TCTAGA	1 cut(s)	692
XmaJI	CCTAGG	1 cut(s)	418
XspI	CTAG	6 cut(s)	90, 419, 693, 762, 959, 1265
Zsp2I	ATGCAT	1 cut(s)	570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.