Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0000771

Physical Location & Seq

Genomic Coordinates Forward (+)

1316335 .. 1321300

Gene Structure 4966 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G001590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2832 bp

ATGAGGTCACTGACCGGATTTCCGCTACTGCTGCAACAATTCAAGGCTCTGTTCAACAAGAACCTCCTCCTCGCATGGCGCAACAAGACCGCCACCTTTCTCCAGCTCCTCTCTCCCTTATTCTTCATCTTCCTCATCTTCTGCTTCCAGAAGGCCTACGACGCTCAGACTCAGTCTTCCACTGCGTACCGGAGCGTCACCGATCCTCAGCCGCTGGTTTCCCCGCCGATCCCGCCCTGCGAGGACAAGTTCTCTATCAAAACGCCGTGCTATGATTTCGTGTGGAGCGGAGATCAGAGCCCTAGGATTCGGAGCGTTGTCGATGCCATCATGGCTAATAATCCCGGAAGGCCAATCCCGGCGACAAAGGTTAAATCGTTTAGAACCCCGGCTGAAGTAGATGAATGGCTGTATAAGAATCCTTTGTATTGCCCAGGAGCTTTGCATTTTGTGGAAAGAAATGCCACTGTGATTAGCTATGGCCTGCAGACTAATTATACTTCTGTTGAAAAACAAGGGAAAACTGAGGATCCCACATTCAAATTTCAAATTCCACTTCAGATTGCTGTGGAGCGTGAGATTGCTAGGTCTCTAATTGGAGATTCAAAATTTAGCTGGGTTGTTGCATTCAAGGAATTTGCACACCCTGCAATGGAGAGGCCTTCTGCAATCGATAACATGGGACCAAGGTTTTTTTTCGCAGCTGCCATGTTTGGTTTTGTCTTTCAAATGACTTCTTTGATCACAGAGAAAGAACTTAAGCTGCGAGAGGCAATGACAATGATGGGCCTTTATGATAGTGCATACTGGTTCTCCTGGCTTACATGGGAGGGAACTATTACACTACTCTCAGCTCTTTTCACAGTTCTCTTTGGAATGATGTTTCGGTTTAATTTTTTCTTAAACAACAGCTTTGCAGTCTTATTCCTTGTCTTCTATCTTTTCCAACTCAATATGATTGGTTTTGCCTTTATGTTATCGGCCTTCATAAAAAAGTCATCTTCAACCACGACTGTCGGTTTCTCCATCTTTATGTTTGGCTTTTTAATCCAGCTATCTACATCAAACAACTATCCATACAATAAAAGCATTTCTAGGAATAAACGAAACTTGTGGTCTCTATTTCCACCTAAACTTCTTTCCCAGGCTCTATATATACTCAGTGAGGCGACATCCACTCCTAAAGAGACTGGCATTAGCTGGAGTAGAAGGGCAAACTGCGGACCAGGGGATGAAAATTGTGTTATAACAATTAATGACATTTATATATGGCTGGTGGCTACATTCTTCCTCTGGTTCGTATTGGCTATATACTTCGACAATATCATCCCAAATGTATCTGGTGTGAGAAAATCAGTTTTTTACTTTCTGAAGCCAGGATACTGGACAGGGAAAAGTGGAAACAAAGTGGAAGAGCGTGGCATTTGTAGTTGCATAGGTTCACTTCCACCATTGGAGCATATTACTCCAGACGATGAAGATGTCCTTGAAGAGGAGAACATTGTTAAAGAGCAAACTAAGGAAGGCACAGTTGATCCAAACCTTGCAGTTCAGATACGTGGCCTTGTAAAAACATATCCTGGCAAAAGACATGGTTGCTGTCGTAGCAAGAGGACGTCACCATACCATGCTCTCAAGGGGTTATGGGTCAACTTTGCAAAGGATCAGTTATTTTGTCTACTTGGACCCAATGGAGCTGGGAAAACCACAGCAATAAATTGTTTAACCGGCATCACACCAGTGACTGGAGGAGATGCGTTGATCTATGGAAATTCTGCCCGAAGCTCTGTCGGCATGGCAAACATTCGAAAAATGATAGGAGTTTGTCCACAGTTTGATATTCTTTGGGATGCATTGTCTGGGCAAGAGCATCTCCACTTATTCGCTAGTATCAAAGGCCTTCCTCCAGCATCAATAAAATTGGCTACTATGAAGTCACTGGAAGAGGTGAAACTGACTGATGCAGCCAAAATGAGAGCTGGTAGTTACAGTGGAGGAATGAAGCGTCGCTTGAGTGTTGCAATAGCCCTTATTGGTGATCCGAAGTTAGTTATCCTTGATGAACCGACAACTGGTATGGATCCAATATCTAGAAGGCATGTATGGGACATCATAGAGGATGCAAAGAAAGGTCGTGCAATCGTCCTGACCACTCACTCGATGGAAGAAGCTGACATATTAGGTGACCGGATAGGAATTATGGCAAAGGGTAGGCTCCGCTGCATTGGAACTTCAATCAGGCTGAAGTCACGATTTGGGACTGGTTTCATTGCTAATGTGAGATTCAAAGAAAGCACAAATGGGGATGAAGTTGCAACATCTCATCACGAAGCTGTGAAGCAGTTATTTAAATATCTTCTTTCAGCGTTGGATGTTTCACCAAAAGAAGAAACAACAGCCTATCTGACTTTTGTGATTCCTCATAATCGAGAGGGAATTTTGGCGAAATTTTTCGCGGAACTTCAAGATCAAGAAGATGAATTTGGCATAGCAGACATTCAAATTGGACTTGCAACTCTTGAAGAAGTTTTCCTAAATATCGCAAGGCGGGCAGAGCTAGAAAGTGCCACAGCCGAGGGGAGGTTGGTTACTCTCACTTTAACATCTGGGGTCTTGGTTCAGCAAGATGAATCTGGTGCACTATGCATATCTGACCACTCACCTGAAACCCCAATACCTCCTAATATTGCAGTTGAACTGATGCCACCTTCAATTTCGCCCAGAAATTTGTTTGGCCGTTCCAAACCAGTAAACGGCATTGTGCTCGACTCCTACCAAATCACTAGTTCTTTCGGTCTAAAGGGTCATACAGGTAGTTGGCGAAGGACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006869 GO:0008150 GO:0010876 GO:0015399 GO:0015405 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0033036 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane_3 ABC_tran

Protein Analysis

943

Amino Acids

105.28

Weight (kDa)

8.78

Isoelectric Point (pI)

40.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC2_membrane_3	PF12698	231 - 438	2.5e-18	ABC-2 family transporter protein
ABC_tran	PF00005	546 - 691	2.4e-23	ABC transporter
AAA_21	PF13304	646 - 723	9.3e-10	AAA domain, putative AbiEii toxin, Type IV TA system
ABCA11_C	PF25158	843 - 874	2.2e-12	ABC transporter A family member 11-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47730 AT5G61690 AT5G61690 AT5G61730 AT5G61730
fragaria_vesca	FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_3g33610 FvH4_5g15280 FvH4_5g17010 FvH4_5g17010 FvH4_5g17010
malus_domestica	MD00G1160200.v1.1 MD11G1124700.v1.1
prunus_persica	Prupe.5G188400_v2.0.a1 Prupe.5G229500_v2.0.a1 Prupe.6G093200_v2.0.a1 Prupe.6G093200_v2.0.a1
pyrus_communis	pycom06g19960 pycom11g10520
rosa_chinensis	RchiOBHm_Chr5g0061021 RchiOBHm_Chr7g0178841 RchiOBHm_Chr7g0180781
rosa_laevigata	RLG00000005230 RLG00000005399 RLG00000005401 RLG00000005403 RLG00000005405 RLG00000035420
rosa_multiflora	Rmu_co8148594.1_g000001 Rmu_co8316781.1_g000001 Rmu_co8482325.1_g000001 Rmu_co8514565.1_g000001 Rmu_sc0000888.1_g000001 Rmu_sc0007457.1_g000010 Rmu_sc0026332.1_g000001 Rmu_ssc0000131.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019630 Rroxscaffold_3G00272530 Rroxscaffold_3G00274500
rosa_rugosa	Rorug01G0114900 Rorug01G0115000 Rorug05G0336100 Rorug06G0420200 Rorug06G0420200 Rorug06G0420300 Rorug06G0420300 Rorug06G0436000
rosa_samantha	Rh1BG106800 Rh5AG398400 Rh5BG411300 Rh5CG436300 Rh5DG425700 Rh7AG019700 Rh7AG037700 Rh7BG019100 Rh7BG037400 Rh7CG019800 Rh7CG039100 Rh7DG019700
rosa_wichuraiana	Rw5G037560 Rw7G001590 Rw7G003110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1247
AatII	GACGTC	1 cut(s)	1619
AccB7I	CCANNNNNTGG	1 cut(s)	1745
AccBSI	CCGCTC	1 cut(s)	288
AccI	GTMKAC	1 cut(s)	1678
AccII	CGCG	1 cut(s)	2456
AclWI	GGATC	9 cut(s)	197, 223, 524, 537, 1529, 1671, 2033, 2075, 2088
AcoI	YGGCCR	1 cut(s)	2734
AcsI	RAATTY	9 cut(s)	542, 549, 608, 635, 1771, 2436, 2447, 2480, 2725
AcuI	CTGAAG	4 cut(s)	414, 542, 1391, 2264
AcyI	GRCGYC	1 cut(s)	1616
AfaI	GTAC	1 cut(s)	188
AfiI	CCNNNNNNNGG	6 cut(s)	652, 1492, 1745, 2072, 2580, 2753
AflII	CTTAAG	1 cut(s)	758
AhlI	ACTAGT	1 cut(s)	2783
AjnI	CCWGG	6 cut(s)	433, 815, 1143, 1225, 1375, 1579
AjuI	GAANNNNNNNTTGG	2 cut(s)	2466, 2498
AleI	CACNNNNGTG	1 cut(s)	1739
Alw21I	GWGCWC	2 cut(s)	2641, 2766
Alw26I	GTCTC	3 cut(s)	594, 1122, 1181
Alw44I	GTGCAC	1 cut(s)	2637
AlwI	GGATC	9 cut(s)	197, 223, 524, 537, 1529, 1671, 2033, 2075, 2088
AlwNI	CAGNNNCTG	2 cut(s)	214, 1745
AoxI	GGCC	9 cut(s)	153, 350, 481, 659, 787, 981, 1561, 1897, 2734
ApaLI	GTGCAC	1 cut(s)	2637
ApeKI	GCWGC	6 cut(s)	31, 701, 704, 763, 1964, 2220
ApoI	RAATTY	9 cut(s)	542, 549, 608, 635, 1771, 2436, 2447, 2480, 2725
AseI	ATTAAT	1 cut(s)	1254
Asp700I	GAANNNNTTC	1 cut(s)	2450
AspA2I	CCTAGG	1 cut(s)	302
AspLEI	GCGC	1 cut(s)	81
AspS9I	GGNCC	5 cut(s)	683, 787, 1223, 1685, 2826
AsuC2I	CCSGG	3 cut(s)	345, 359, 389
AsuHPI	GGTGA	7 cut(s)	190, 1611, 1960, 2048, 2195, 2370, 2652
AsuII	TTCGAA	1 cut(s)	1807
AvaII	GGWCC	4 cut(s)	683, 1223, 1685, 2826
AvrII	CCTAGG	1 cut(s)	302
BaeGI	GKGCMC	1 cut(s)	2641
BamHI	GGATCC	2 cut(s)	529, 2080
BanII	GRGCYC	1 cut(s)	302
BarI	GAAGNNNNNNTAC	2 cut(s)	1364, 1396
BbsI	GAAGAC	2 cut(s)	168, 925
Bbv12I	GWGCWC	2 cut(s)	2641, 2766
BbvCI	CCTCAGC	1 cut(s)	207
BbvI	GCAGC	6 cut(s)	18, 691, 713, 750, 1976, 2207
BccI	CCATC	4 cut(s)	335, 778, 1034, 2155
BceAI	ACGGC	3 cut(s)	250, 2721, 2770
BcgI	CGANNNNNNTGC	2 cut(s)	2746, 2780
BciT130I	CCWGG	6 cut(s)	435, 817, 1145, 1227, 1377, 1581
BciVI	GTATCC	1 cut(s)	1373
BclI	TGATCA	1 cut(s)	741
BcnI	CCSGG	3 cut(s)	345, 359, 389
BcoDI	GTCTC	3 cut(s)	594, 1122, 1181
BcuI	ACTAGT	1 cut(s)	2783
BfaI	CTAG	7 cut(s)	303, 585, 1095, 1887, 2091, 2558, 2784
BfmI	CTRYAG	1 cut(s)	485
BfrI	CTTAAG	1 cut(s)	758
BfuI	GTATCC	1 cut(s)	1373
BglI	GCCNNNNNGGC	1 cut(s)	332
BisI	GCNGC	7 cut(s)	32, 212, 702, 705, 764, 1965, 2221
BlnI	CCTAGG	1 cut(s)	302
BlsI	GCNGC	7 cut(s)	33, 213, 703, 706, 765, 1966, 2222
Bme1390I	CCNGG	9 cut(s)	345, 359, 389, 435, 817, 1145, 1227, 1377, 1581
Bme18I	GGWCC	4 cut(s)	683, 1223, 1685, 2826
BmgT120I	GGNCC	5 cut(s)	683, 787, 1223, 1685, 2826
BmiI	GGNNCC	5 cut(s)	531, 684, 1687, 2082, 2216
BmrFI	CCNGG	9 cut(s)	345, 359, 389, 435, 817, 1145, 1227, 1377, 1581
BmsI	GCATC	9 cut(s)	313, 1740, 1744, 1840, 1879, 1919, 1951, 2110, 2691
BpiI	GAAGAC	2 cut(s)	168, 925
BpmI	CTGGAG	5 cut(s)	86, 1222, 1452, 1767, 1890
Bpu10I	CCTNAGC	1 cut(s)	207
Bpu14I	TTCGAA	1 cut(s)	1807
BpuEI	CTTGAG	2 cut(s)	1619, 2032
BpuMI	CCSGG	3 cut(s)	345, 359, 389
Bsa29I	ATCGAT	1 cut(s)	672
BsaAI	YACGTR	1 cut(s)	1559
BsaHI	GRCGYC	1 cut(s)	1616
BsaI	GGTCTC	2 cut(s)	594, 1122
BsaJI	CCNNGG	7 cut(s)	302, 387, 433, 686, 1143, 1226, 2574
BsaWI	WCCGGW	3 cut(s)	14, 189, 2187
BsaXI	ACNNNNNCTCC	4 cut(s)	797, 827, 1162, 1192
Bsc4I	CCNNNNNNNGG	6 cut(s)	652, 1492, 1745, 2072, 2580, 2753
Bse118I	RCCGGY	1 cut(s)	1727
Bse1I	ACTGG	9 cut(s)	812, 1195, 1388, 1739, 1750, 1944, 2077, 2266, 2747
Bse3DI	GCAATG	3 cut(s)	657, 780, 2268
BseBI	CCWGG	6 cut(s)	435, 817, 1145, 1227, 1377, 1581
BseCI	ATCGAT	1 cut(s)	672
BseDI	CCNNGG	7 cut(s)	302, 387, 433, 686, 1143, 1226, 2574
BseGI	GGATG	7 cut(s)	1172, 1237, 1326, 1855, 2125, 2311, 2377
BseLI	CCNNNNNNNGG	6 cut(s)	652, 1492, 1745, 2072, 2580, 2753
BseMI	GCAATG	3 cut(s)	657, 780, 2268
BseMII	CTCAG	6 cut(s)	179, 185, 221, 516, 864, 1174
BseNI	ACTGG	9 cut(s)	812, 1195, 1388, 1739, 1750, 1944, 2077, 2266, 2747
BseRI	GAGGAG	5 cut(s)	56, 59, 98, 1508, 1764
BseSI	GKGCMC	1 cut(s)	2641
BseXI	GCAGC	6 cut(s)	18, 691, 713, 750, 1976, 2207
BseYI	CCCAGC	2 cut(s)	615, 1697
Bsh1236I	CGCG	1 cut(s)	2456
BshFI	GGCC	9 cut(s)	155, 352, 483, 661, 789, 983, 1563, 1899, 2736
BshVI	ATCGAT	1 cut(s)	672
BsiHKAI	GWGCWC	2 cut(s)	2641, 2766
BsiSI	CCGG	7 cut(s)	15, 190, 345, 359, 389, 1728, 2188
BslFI	GGGAC	3 cut(s)	696, 2120, 2272
BslI	CCNNNNNNNGG	6 cut(s)	652, 1492, 1745, 2072, 2580, 2753
BsmAI	GTCTC	3 cut(s)	594, 1122, 1181
BsmFI	GGGAC	3 cut(s)	696, 2120, 2272
BsmI	GAATGC	1 cut(s)	626
BsnI	GGCC	9 cut(s)	155, 352, 483, 661, 789, 983, 1563, 1899, 2736
Bso31I	GGTCTC	2 cut(s)	594, 1122
Bsp119I	TTCGAA	1 cut(s)	1807
Bsp1286I	GDGCHC	3 cut(s)	302, 2641, 2766
BspANI	GGCC	9 cut(s)	155, 352, 483, 661, 789, 983, 1563, 1899, 2736
BspCNI	CTCAG	6 cut(s)	178, 184, 220, 517, 863, 1173
BspDI	ATCGAT	1 cut(s)	672
BspFNI	CGCG	1 cut(s)	2456
BspLI	GGNNCC	5 cut(s)	531, 684, 1687, 2082, 2216
BspMAI	CTGCAG	1 cut(s)	489
BspPI	GGATC	9 cut(s)	197, 223, 524, 537, 1529, 1671, 2033, 2075, 2088
BspQI	GCTCTTC	1 cut(s)	1407
BspT104I	TTCGAA	1 cut(s)	1807
BspTI	CTTAAG	1 cut(s)	758
BspTNI	GGTCTC	2 cut(s)	594, 1122
BsrBI	CCGCTC	1 cut(s)	288
BsrDI	GCAATG	3 cut(s)	657, 780, 2268
BsrFI	RCCGGY	1 cut(s)	1727
BsrI	ACTGG	9 cut(s)	812, 1195, 1388, 1739, 1750, 1944, 2077, 2266, 2747
BssAI	RCCGGY	1 cut(s)	1727
BssECI	CCNNGG	7 cut(s)	302, 387, 433, 686, 1143, 1226, 2574
BssNI	GRCGYC	1 cut(s)	1616
BssT1I	CCWWGG	2 cut(s)	302, 686
Bst2UI	CCWGG	6 cut(s)	435, 817, 1145, 1227, 1377, 1581
Bst4CI	ACNGT	6 cut(s)	469, 865, 1015, 1531, 1833, 1991
Bst6I	CTCTTC	3 cut(s)	1407, 1485, 1938
BstACI	GRCGYC	1 cut(s)	1616
BstAFI	CTTAAG	1 cut(s)	758
BstAPI	GCANNNNNTGC	1 cut(s)	647
BstBAI	YACGTR	1 cut(s)	1559
BstBI	TTCGAA	1 cut(s)	1807
BstC8I	GCNNGC	2 cut(s)	485, 2550
BstDEI	CTNAG	7 cut(s)	165, 171, 207, 525, 850, 1160, 1518
BstEII	GGTNACC	1 cut(s)	2183
BstENI	CCTNNNNNAGG	1 cut(s)	1490
BstF5I	GGATG	7 cut(s)	1172, 1237, 1326, 1855, 2125, 2311, 2377
BstFNI	CGCG	1 cut(s)	2456
BstHHI	GCGC	1 cut(s)	81
BstMAI	GTCTC	3 cut(s)	594, 1122, 1181
BstMWI	GCNNNNNNNGC	9 cut(s)	31, 161, 232, 332, 647, 1605, 1791, 2549, 2554
BstNI	CCWGG	6 cut(s)	435, 817, 1145, 1227, 1377, 1581
BstNSI	RCATGY	1 cut(s)	2102
BstPI	GGTNACC	1 cut(s)	2183
BstSCI	CCNGG	9 cut(s)	343, 357, 387, 433, 815, 1143, 1225, 1375, 1579
BstSFI	CTRYAG	1 cut(s)	485
BstSLI	GKGCMC	1 cut(s)	2641
BstUI	CGCG	1 cut(s)	2456
BstV1I	GCAGC	6 cut(s)	18, 691, 713, 750, 1976, 2207
BstV2I	GAAGAC	2 cut(s)	168, 925
BstX2I	RGATCY	2 cut(s)	529, 2080
BstXI	CCANNNNNNTGG	1 cut(s)	1383
BstYI	RGATCY	2 cut(s)	529, 2080
Bsu15I	ATCGAT	1 cut(s)	672
BsuI	GTATCC	1 cut(s)	1373
BsuRI	GGCC	9 cut(s)	155, 352, 483, 661, 789, 983, 1563, 1899, 2736
BsuTUI	ATCGAT	1 cut(s)	672
BtsCI	GGATG	7 cut(s)	1172, 1237, 1326, 1855, 2125, 2311, 2377
BtsI	GCAGTG	1 cut(s)	180
BtsIMutI	CAGTG	7 cut(s)	8, 180, 465, 1168, 1746, 1937, 1996
Cac8I	GCNNGC	2 cut(s)	485, 2550
CaiI	CAGNNNCTG	2 cut(s)	214, 1745
CfoI	GCGC	1 cut(s)	81
Cfr10I	RCCGGY	1 cut(s)	1727
Cfr13I	GGNCC	5 cut(s)	683, 787, 1223, 1685, 2826
ClaI	ATCGAT	1 cut(s)	672
CseI	GACGC	3 cut(s)	170, 184, 1994
Csp6I	GTAC	1 cut(s)	187
CviAII	CATG	9 cut(s)	75, 331, 679, 709, 825, 1592, 1628, 1795, 2099
CviQI	GTAC	1 cut(s)	187
DdeI	CTNAG	7 cut(s)	165, 171, 207, 525, 850, 1160, 1518
DraI	TTTAAA	1 cut(s)	2350
EaeI	YGGCCR	1 cut(s)	2734
Eam1104I	CTCTTC	3 cut(s)	1407, 1485, 1938
EarI	CTCTTC	3 cut(s)	1407, 1485, 1938
Eco130I	CCWWGG	2 cut(s)	302, 686
Eco147I	AGGCCT	3 cut(s)	155, 661, 1899
Eco24I	GRGCYC	1 cut(s)	302
Eco31I	GGTCTC	2 cut(s)	594, 1122
Eco47I	GGWCC	4 cut(s)	683, 1223, 1685, 2826
Eco57I	CTGAAG	4 cut(s)	414, 542, 1391, 2264
Eco91I	GGTNACC	1 cut(s)	2183
EcoNI	CCTNNNNNAGG	1 cut(s)	1490
EcoO109I	RGGNCCY	1 cut(s)	2826
EcoO65I	GGTNACC	1 cut(s)	2183
EcoRII	CCWGG	6 cut(s)	433, 815, 1143, 1225, 1375, 1579
EcoT14I	CCWWGG	2 cut(s)	302, 686
EcoT22I	ATGCAT	2 cut(s)	1855, 2648
EcoT38I	GRGCYC	1 cut(s)	302
ErhI	CCWWGG	2 cut(s)	302, 686
FaeI	CATG	9 cut(s)	78, 334, 682, 712, 828, 1595, 1631, 1798, 2102
FalI	AAGNNNNNCTT	4 cut(s)	1470, 1502, 1994, 2026
FaqI	GGGAC	3 cut(s)	696, 2120, 2272
FatI	CATG	9 cut(s)	74, 330, 678, 708, 824, 1591, 1627, 1794, 2098
FauI	CCCGC	3 cut(s)	231, 240, 2541
FbaI	TGATCA	1 cut(s)	741
FblI	GTMKAC	1 cut(s)	1678
Fnu4HI	GCNGC	7 cut(s)	32, 212, 702, 705, 764, 1965, 2221
FokI	GGATG	7 cut(s)	1159, 1244, 1313, 1862, 2132, 2318, 2384
FriOI	GRGCYC	1 cut(s)	302
Fsp4HI	GCNGC	7 cut(s)	32, 212, 702, 705, 764, 1965, 2221
FspBI	CTAG	7 cut(s)	303, 585, 1095, 1887, 2091, 2558, 2784
GlaI	GCGC	1 cut(s)	80
GluI	GCNGC	7 cut(s)	32, 212, 702, 705, 764, 1965, 2221
GsaI	CCCAGC	2 cut(s)	619, 1701
GsuI	CTGGAG	5 cut(s)	86, 1222, 1452, 1767, 1890
HaeIII	GGCC	9 cut(s)	155, 352, 483, 661, 789, 983, 1563, 1899, 2736
HapII	CCGG	7 cut(s)	15, 190, 345, 359, 389, 1728, 2188
HgaI	GACGC	3 cut(s)	170, 184, 1994
HhaI	GCGC	1 cut(s)	81
Hin1I	GRCGYC	1 cut(s)	1616
Hin1II	CATG	9 cut(s)	78, 334, 682, 712, 828, 1595, 1631, 1798, 2102
Hin6I	GCGC	1 cut(s)	79
HinP1I	GCGC	1 cut(s)	79
HincII	GTYRAC	1 cut(s)	1651
HindII	GTYRAC	1 cut(s)	1651
HinfI	GANTC	8 cut(s)	169, 307, 418, 602, 2283, 2416, 2630, 2768
HpaII	CCGG	7 cut(s)	15, 190, 345, 359, 389, 1728, 2188
HphI	GGTGA	7 cut(s)	190, 1611, 1960, 2048, 2195, 2370, 2652
Hpy166II	GTNNAC	6 cut(s)	1442, 1651, 1679, 1829, 2639, 2752
Hpy188I	TCNGA	9 cut(s)	168, 297, 312, 561, 1371, 1554, 2043, 2406, 2653
Hpy8I	GTNNAC	6 cut(s)	1442, 1651, 1679, 1829, 2639, 2752
Hpy99I	CGWCG	2 cut(s)	164, 2010
HpyCH4III	ACNGT	6 cut(s)	469, 865, 1015, 1531, 1833, 1991
HpyCH4IV	ACGT	2 cut(s)	1558, 1616
HpyF10VI	GCNNNNNNNGC	9 cut(s)	31, 161, 232, 332, 647, 1605, 1791, 2549, 2554
HpyF3I	CTNAG	7 cut(s)	165, 171, 207, 525, 850, 1160, 1518
HpySE526I	ACGT	2 cut(s)	1558, 1616
Hsp92I	GRCGYC	1 cut(s)	1616
Hsp92II	CATG	9 cut(s)	78, 334, 682, 712, 828, 1595, 1631, 1798, 2102
HspAI	GCGC	1 cut(s)	79
Ksp22I	TGATCA	1 cut(s)	741
LguI	GCTCTTC	1 cut(s)	1407
LmnI	GCTCC	9 cut(s)	111, 192, 285, 312, 437, 571, 1456, 1694, 2220
Lsp1109I	GCAGC	6 cut(s)	18, 691, 713, 750, 1976, 2207
LweI	GCATC	9 cut(s)	313, 1740, 1744, 1840, 1879, 1919, 1951, 2110, 2691
MaeI	CTAG	7 cut(s)	303, 585, 1095, 1887, 2091, 2558, 2784
MaeII	ACGT	2 cut(s)	1558, 1616
MaeIII	GTNAC	9 cut(s)	6, 196, 1617, 1741, 1935, 1985, 2183, 2247, 2587
MbiI	CCGCTC	1 cut(s)	288
MflI	RGATCY	2 cut(s)	529, 2080
MhlI	GDGCHC	3 cut(s)	302, 2641, 2766
MlyI	GAGTC	2 cut(s)	163, 2762
MmeI	TCCRAC	2 cut(s)	970, 2349
Mph1103I	ATGCAT	2 cut(s)	1855, 2648
MroXI	GAANNNNTTC	1 cut(s)	2450
MslI	CAYNNNNRTG	2 cut(s)	1031, 1739
MspA1I	CMGCKG	3 cut(s)	214, 704, 2220
MspCI	CTTAAG	1 cut(s)	758
MspI	CCGG	7 cut(s)	15, 190, 345, 359, 389, 1728, 2188
MspR9I	CCNGG	9 cut(s)	345, 359, 389, 435, 817, 1145, 1227, 1377, 1581
Mva1269I	GAATGC	1 cut(s)	626
MvaI	CCWGG	6 cut(s)	435, 817, 1145, 1227, 1377, 1581
MvnI	CGCG	1 cut(s)	2456
MwoI	GCNNNNNNNGC	9 cut(s)	31, 161, 232, 332, 647, 1605, 1791, 2549, 2554
NciI	CCSGG	3 cut(s)	345, 359, 389
NlaIII	CATG	9 cut(s)	78, 334, 682, 712, 828, 1595, 1631, 1798, 2102
NlaIV	GGNNCC	5 cut(s)	531, 684, 1687, 2082, 2216
NmeAIII	GCCGAG	1 cut(s)	2599
NmuCI	GTSAC	7 cut(s)	6, 196, 1617, 1741, 1935, 2183, 2247
NsiI	ATGCAT	2 cut(s)	1855, 2648
NspI	RCATGY	1 cut(s)	2102
NspV	TTCGAA	1 cut(s)	1807
OliI	CACNNNNGTG	1 cut(s)	1739
PceI	AGGCCT	3 cut(s)	155, 661, 1899
PciSI	GCTCTTC	1 cut(s)	1407
PctI	GAATGC	1 cut(s)	626
PdmI	GAANNNNTTC	1 cut(s)	2450
PfeI	GAWTC	6 cut(s)	307, 418, 602, 2283, 2416, 2630
PflFI	GACNNNGTC	1 cut(s)	172
PflMI	CCANNNNNTGG	1 cut(s)	1745
PfoI	TCCNGGA	1 cut(s)	343
PkrI	GCNGC	7 cut(s)	33, 213, 703, 706, 765, 1966, 2222
PleI	GAGTC	2 cut(s)	163, 2762
PpsI	GAGTC	2 cut(s)	163, 2762
Ppu21I	YACGTR	1 cut(s)	1559
PpuMI	RGGWCCY	1 cut(s)	2826
PshBI	ATTAAT	1 cut(s)	1254
PsiI	TTATAA	1 cut(s)	1247
Psp5II	RGGWCCY	1 cut(s)	2826
Psp6I	CCWGG	6 cut(s)	433, 815, 1143, 1225, 1375, 1579
PspEI	GGTNACC	1 cut(s)	2183
PspFI	CCCAGC	2 cut(s)	615, 1697
PspGI	CCWGG	6 cut(s)	433, 815, 1143, 1225, 1375, 1579
PspN4I	GGNNCC	5 cut(s)	531, 684, 1687, 2082, 2216
PspPI	GGNCC	5 cut(s)	683, 787, 1223, 1685, 2826
PspPPI	RGGWCCY	1 cut(s)	2826
PstI	CTGCAG	1 cut(s)	489
PstNI	CAGNNNCTG	2 cut(s)	214, 1745
PsuI	RGATCY	2 cut(s)	529, 2080
PsyI	GACNNNGTC	1 cut(s)	172
PvuII	CAGCTG	1 cut(s)	704
RsaI	GTAC	1 cut(s)	188
RsaNI	GTAC	1 cut(s)	187
RseI	CAYNNNNRTG	2 cut(s)	1031, 1739
SapI	GCTCTTC	1 cut(s)	1407
SatI	GCNGC	7 cut(s)	32, 212, 702, 705, 764, 1965, 2221
Sau96I	GGNCC	5 cut(s)	683, 787, 1223, 1685, 2826
SchI	GAGTC	2 cut(s)	163, 2762
ScrFI	CCNGG	9 cut(s)	345, 359, 389, 435, 817, 1145, 1227, 1377, 1581
SduI	GDGCHC	3 cut(s)	302, 2641, 2766
SfaNI	GCATC	9 cut(s)	313, 1740, 1744, 1840, 1879, 1919, 1951, 2110, 2691
SfcI	CTRYAG	1 cut(s)	485
SfuI	TTCGAA	1 cut(s)	1807
SinI	GGWCC	4 cut(s)	683, 1223, 1685, 2826
SmiI	ATTTAAAT	1 cut(s)	2350
SmiMI	CAYNNNNRTG	2 cut(s)	1031, 1739
SmlI	CTYRAG	3 cut(s)	758, 1634, 2011
SmoI	CTYRAG	3 cut(s)	758, 1634, 2011
SpeI	ACTAGT	1 cut(s)	2783
SseBI	AGGCCT	3 cut(s)	155, 661, 1899
SspI	AATATT	1 cut(s)	2686
SspMI	CTAG	7 cut(s)	303, 585, 1095, 1887, 2091, 2558, 2784
StuI	AGGCCT	3 cut(s)	155, 661, 1899
StyD4I	CCNGG	9 cut(s)	343, 357, 387, 433, 815, 1143, 1225, 1375, 1579
StyI	CCWWGG	2 cut(s)	302, 686
SwaI	ATTTAAAT	1 cut(s)	2350
TaaI	ACNGT	6 cut(s)	469, 865, 1015, 1531, 1833, 1991
TaiI	ACGT	2 cut(s)	1561, 1619
TaqI	TCGA	7 cut(s)	321, 672, 1317, 1807, 2159, 2428, 2766
TaqII	GACCGA	1 cut(s)	2783
TauI	GCSGC	1 cut(s)	214
TfiI	GAWTC	6 cut(s)	307, 418, 602, 2283, 2416, 2630
TscAI	CASTG	7 cut(s)	15, 187, 472, 1168, 1746, 1944, 1996
TseFI	GTSAC	7 cut(s)	6, 196, 1617, 1741, 1935, 2183, 2247
TseI	GCWGC	6 cut(s)	31, 701, 704, 763, 1964, 2220
Tsp45I	GTSAC	7 cut(s)	6, 196, 1617, 1741, 1935, 2183, 2247
TspRI	CASTG	7 cut(s)	15, 187, 472, 1168, 1746, 1944, 1996
Tth111I	GACNNNGTC	1 cut(s)	172
Van91I	CCANNNNNTGG	1 cut(s)	1745
Vha464I	CTTAAG	1 cut(s)	758
VneI	GTGCAC	1 cut(s)	2637
VpaK11BI	GGWCC	4 cut(s)	683, 1223, 1685, 2826
VspI	ATTAAT	1 cut(s)	1254
XagI	CCTNNNNNAGG	1 cut(s)	1490
XapI	RAATTY	9 cut(s)	542, 549, 608, 635, 1771, 2436, 2447, 2480, 2725
XbaI	TCTAGA	1 cut(s)	2090
XceI	RCATGY	1 cut(s)	2102
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2158
XmaJI	CCTAGG	1 cut(s)	302
XmiI	GTMKAC	1 cut(s)	1678
XmnI	GAANNNNTTC	1 cut(s)	2450
XspI	CTAG	7 cut(s)	303, 585, 1095, 1887, 2091, 2558, 2784
ZraI	GACGTC	1 cut(s)	1617
Zsp2I	ATGCAT	2 cut(s)	1855, 2648

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.