Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0001672

Physical Location & Seq

Genomic Coordinates Forward (+)

18081049 .. 18088561

Gene Structure 7513 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g24060.t9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2292 bp

ATGGCGACTCTATTATCTCAGCCACCCCTCCTCCACCGAATTCTCTGCAACAACAACAACAAGACCGACTCAACTCCCTTCAAAGAGAAGAAGCACGTCTCCGTCGACTACGACGCCGCCACTCACACCCTCTCCACCCAAATCAGCGGCCTCCGGAAGCGAGACATCCCCAAGCACCACCGCCTCCGCCTCCAAACCGACCCTTTCCAGAAGGACTGGTCCGTCTCCGACGTCGTCCATCGCGTCTATCAGCTCCGCCGCTACGACGATATCGACGGCGTGCTCAACCGATGGGTCGGACGCTTCGCCCGGAAGAATTTCCCGATTTTGATCAGAGAGATGGCGGCGAGGGGGTCGGTGGATCACTGTATGCAAGTGTTCCGGTGGATGAAGACCCTCAAGAACTACTGTGCTCGCACCGATATTTACAACATGCTGATCAGATTGCACGCCAGGCATACTCTTGTTGATCAAGCTCGCGGCTTGTTTTTCGAAATGCAGGAATGGAGGTGCAAACCTGATGCCGAGTCCTACAATGCTCTTATCAATGCGCATGGTCGAGCAGGTCAATGGCGCTGGGCCATGAACATTATGGATGACATGCTGCGTGCAGCTATCCCTCCTAGTCGGTCAACATATAACAACTTGATCAATGCATGTGGATCTAGTGGAAACTGGAGAGAAGCGTTAAAAGCTTGCAAGAAAATGACAGATAATGGAGTTGGACCTGATCTTGTGACTCACAATATTGTTTTGTCTGCGTACAAAACTGGGGCTCAATATTCAAAAGCTTTGTCTTATTTTGAACTTATGAAGGGAACAAATGTCCGTCCAGACACTACAACCCTCAATATTGTTATATATTGCCTAGTGAAGCTTGGACAGTATGGAAAAGCAATGGATATTTTCAGTTCCATGAGAGATAAGGGAGCAGAATGTCGCCCTGACATTGTAACATTCACCAGCATCATTCAATTGTATTCTGTGAGCGGACAGATAGACAATTGCACAGCCATATTTAATACAATTCTTGCAGAAGGGCTAAAACCTAACATTGTTTCCTATAATGCACTGTTAGGTGCATATGCTTCACGTGGGATGTGCACAGAGGCGGCGTCAGTATTTAATGAGATGAAGAAAAGTAGTTTCCGGCCTGATGTTGTGTCATATACATCTTTACTCAATGCTTATGGAAGATCACAACATCCTAAAAAGGCTAGGGAAGTTTTTGACAGGATGAAATCCAACCACTTGAAGCCAAACCTTGTGAGCTACAACGCACTGATTAATGCCTATGGATCCAGTGGCTTATTAGCCGAAGCTGTTGAGGTCTTGCGTGAGATGGAGCAAGATGGAATTCATCCAAACATAGTCTCTATATGTACCCTTTTGGCTGCTTGTGGACAATGTGGCCAGAAGGTGAAAATTGATACCATACTTTCAGCAGCCAAGCTGCGAGGCATAGTACTGAACACAATTGCGTATAATTCAGCTATTGGAAGCTATATGAATTTGGGAGAACATGAGAAAGCTATAAACTTGTATCAATTGATGAGAAAGAAGAAAGTGAAACCGGATTCTGTTACTTTCAATGTGTTGATAAGTGGTTGTTGTAAGATGTCGAAATACAGTGAGGCGATAACTTTTTTTGATGAAATGGTGGATTTGAAAATTCCTTTATCCAAAGAAGTGTACTCATCTGTGCTCTGTGCCTACAGCAAGAAGGGCCAACTGTTGGAAGCGGAATCTGTATTCAACTCGATGAAGATGGCTGGTTGTCCTCCTGATATAGTTACATATACTGCAATGTTACATGCGTATAGTGCTGCAGAGAACTGGGAAAAGGCTTGTGAGCTATTTCAAGAGATGGGAATAAATGGTATCCAACCAGATGCTATCGCATGTGCAGCTTTGATGAGAGCTTTCAACAAAGGAGGCCTTCCCTCTAGAGTTCTTATTCTGGCAGAACTCATGAGAGAGAAAGAAATTCCTTTCAATGATGCCATTTTCTTCGAAATGGTTTCGGCTTGTAGCTTATTACAAGATTGGAGAACAACAATACAATTGATTAAGGTAATAGAGCCCTCATTACCTAGACTTTCAGTCGGGCTTATGAATCAGCTTCTGCAGATTATGGGAAGAAGCGGAAAGACAGAGGCTATGATGAAGTTGTTCTACAAGATAGTTGCATCCAATGGTGATATCAACTTCGATACTTACTCAATTTTGTTGAAGAATCTTTTGTCTGTTGGAAGTTGGAGGAAATATATTGAGTTATATACATTGATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0003824 GO:0004518 GO:0004519 GO:0005198 GO:0005488 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010239 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0022414 GO:0031425 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

764

Amino Acids

85.92

Weight (kDa)

9.15

Isoelectric Point (pI)

32.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	142 - 182	6.2e-08	PPR repeat family
PPR_3	PF13812	163 - 221	5.4e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	173 - 220	5.2e-11	PPR repeat family
PPR_long	PF17177	194 - 308	1.8e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	197 - 255	7.9e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	208 - 255	4.1e-10	PPR repeat family
TPR_24	PF23276	209 - 305	2.9e-08	Fungal tetratrico peptide repeats
PPR	PF01535	211 - 241	1.5e-06	PPR repeat
PPR_long	PF17177	263 - 395	2.8e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	303 - 363	7.4e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	350 - 397	6.9e-15	PPR repeat family
PPR	PF01535	353 - 382	7.1e-07	PPR repeat
PPR_long	PF17177	370 - 481	5.4e-10	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	373 - 433	4.3e-18	Pentatricopeptide repeat domain
PPR_2	PF13041	385 - 432	1.5e-13	PPR repeat family
PPR	PF01535	388 - 416	2.7e-06	PPR repeat
TPR_24	PF23276	392 - 468	6.4e-07	Fungal tetratrico peptide repeats
PPR_1	PF12854	417 - 449	1.1e-09	PPR repeat
PPR_2	PF13041	420 - 467	2.5e-11	PPR repeat family
PPR	PF01535	423 - 453	2.1e-08	PPR repeat
PPR_3	PF13812	479 - 539	3.5e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	491 - 539	5.7e-16	PPR repeat family
PPR_long	PF17177	509 - 652	8.8e-13	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	522 - 554	6.3e-10	PPR repeat
PPR_2	PF13041	527 - 568	2.1e-07	PPR repeat family
PPR	PF01535	528 - 556	1.5e-07	PPR repeat
PPR_3	PF13812	550 - 607	1e-06	Pentatricopeptide repeat domain
PPR	PF01535	564 - 593	4.7e-06	PPR repeat
PPR_2	PF13041	564 - 607	9.8e-12	PPR repeat family
PPR_1	PF12854	592 - 623	1.3e-06	PPR repeat
PPR_2	PF13041	595 - 642	3.6e-11	PPR repeat family
PPR	PF01535	598 - 628	1.6e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001672)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41720 AT2G41720 AT2G41720
fragaria_vesca	FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060
malus_domestica	MD12G1080100.v1.1
prunus_persica	Prupe.7G058400_v2.0.a1 Prupe.7G058400_v2.0.a1 Prupe.7G058400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0482651
rosa_laevigata	RLG00000001090 RLG00000016982 RLG00000023335 RLG00000028152 RLG00000032501
rosa_multiflora	Rmu_sc0004946.1_g000004 Rmu_sc0006069.1_g000004 Rmu_sc0015893.1_g000010
rosa_roxburghii	Rroxscaffold_3G00229260 Rroxscaffold_3G00244090 Rroxscaffold_4G00320230 Rroxscaffold_6G00399060 Rroxscaffold_7G00168600
rosa_rugosa	Rorug03G0197600 Rorug03G0197700
rosa_samantha	Rh3AG051200 Rh3AG249000 Rh3BG052500 Rh3BG284300 Rh3CG052100 Rh3CG282200 Rh3DG052800 Rh3DG278200 Rh4BG176200 Rh6AG132300 Rh7AG450400 Rh7BG246700 Rh7BG421800 Rh7BG421900 Rh7CG470100
rosa_wichuraiana	Rw3G022490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	221
AatII	GACGTC	1 cut(s)	234
Acc16I	TGCGCA	1 cut(s)	552
Acc36I	ACCTGC	1 cut(s)	554
AccB7I	CCANNNNNTGG	1 cut(s)	1735
AccBSI	CCGCTC	1 cut(s)	990
AccI	GTMKAC	1 cut(s)	105
AccII	CGCG	2 cut(s)	243, 480
AccIII	TCCGGA	1 cut(s)	153
AclWI	GGATC	4 cut(s)	369, 670, 1293, 1306
AcoI	YGGCCR	1 cut(s)	1411
AcsI	RAATTY	6 cut(s)	39, 316, 1356, 1510, 1671, 1986
AcvI	CACGTG	1 cut(s)	1094
AcyI	GRCGYC	3 cut(s)	114, 231, 1115
AfaI	GTAC	4 cut(s)	764, 1384, 1467, 1694
AfiI	CCNNNNNNNGG	1 cut(s)	1735
AhdI	GACNNNNNGTC	1 cut(s)	2102
AjiI	CACGTC	1 cut(s)	97
AjnI	CCWGG	1 cut(s)	452
Alw21I	GWGCWC	4 cut(s)	285, 415, 1106, 1707
Alw26I	GTCTC	4 cut(s)	103, 156, 229, 1378
Alw44I	GTGCAC	1 cut(s)	1102
AlwI	GGATC	4 cut(s)	369, 670, 1293, 1306
AlwNI	CAGNNNCTG	1 cut(s)	2125
Aor13HI	TCCGGA	1 cut(s)	153
AoxI	GGCC	6 cut(s)	148, 579, 1151, 1411, 1726, 1936
ApaLI	GTGCAC	1 cut(s)	1102
ApeKI	GCWGC	7 cut(s)	604, 611, 1394, 1445, 1453, 1826, 1907
ApoI	RAATTY	6 cut(s)	39, 316, 1356, 1510, 1671, 1986
ArsI	GACNNNNNNTTYG	2 cut(s)	779, 811
AseI	ATTAAT	1 cut(s)	1287
Asp700I	GAANNNNTTC	2 cut(s)	317, 2171
AspLEI	GCGC	2 cut(s)	553, 576
AspS9I	GGNCC	4 cut(s)	219, 579, 725, 1726
AsuC2I	CCSGG	1 cut(s)	310
AsuHPI	GGTGA	3 cut(s)	952, 1432, 2210
AsuII	TTCGAA	2 cut(s)	492, 2013
AvaII	GGWCC	2 cut(s)	219, 725
BaeGI	GKGCMC	1 cut(s)	1106
BalI	TGGCCA	1 cut(s)	1413
BamHI	GGATCC	1 cut(s)	1298
BanII	GRGCYC	2 cut(s)	778, 2085
BarI	GAAGNNNNNNTAC	2 cut(s)	2159, 2191
BbrPI	CACGTG	1 cut(s)	1094
BbsI	GAAGAC	1 cut(s)	398
Bbv12I	GWGCWC	4 cut(s)	285, 415, 1106, 1707
BbvI	GCAGC	7 cut(s)	591, 623, 1381, 1440, 1457, 1813, 1919
BccI	CCATC	7 cut(s)	246, 285, 334, 1336, 1346, 1762, 1861
BceAI	ACGGC	1 cut(s)	292
BcgI	CGANNNNNNTGC	2 cut(s)	27, 61
BciT130I	CCWGG	1 cut(s)	454
BciVI	GTATCC	1 cut(s)	1892
BclI	TGATCA	4 cut(s)	330, 438, 469, 648
BcnI	CCSGG	1 cut(s)	310
BcoDI	GTCTC	4 cut(s)	103, 156, 229, 1378
BfaI	CTAG	6 cut(s)	624, 666, 869, 1218, 1947, 2094
BfmI	CTRYAG	3 cut(s)	1714, 1827, 2126
BfoI	RGCGCY	1 cut(s)	577
BfuAI	ACCTGC	1 cut(s)	554
BfuI	GTATCC	1 cut(s)	1892
BmcAI	AGTACT	1 cut(s)	1467
Bme1390I	CCNGG	2 cut(s)	310, 454
Bme18I	GGWCC	2 cut(s)	219, 725
BmeRI	GACNNNNNGTC	1 cut(s)	2102
BmgBI	CACGTC	1 cut(s)	97
BmgT120I	GGNCC	4 cut(s)	219, 579, 725, 1726
BmiI	GGNNCC	1 cut(s)	1300
BmrFI	CCNGG	2 cut(s)	310, 454
BmrI	ACTGGG	2 cut(s)	780, 1846
BmsI	GCATC	5 cut(s)	511, 975, 1882, 1990, 2198
BmuI	ACTGGG	2 cut(s)	780, 1846
BpiI	GAAGAC	1 cut(s)	398
BpmI	CTGGAG	1 cut(s)	697
Bpu14I	TTCGAA	2 cut(s)	492, 2013
BpuEI	CTTGAG	1 cut(s)	383
BpuMI	CCSGG	1 cut(s)	310
BsaAI	YACGTR	1 cut(s)	1094
BsaBI	GATNNNNATC	1 cut(s)	329
BsaHI	GRCGYC	3 cut(s)	114, 231, 1115
BsaWI	WCCGGW	3 cut(s)	153, 381, 1573
BsaXI	ACNNNNNCTCC	4 cut(s)	15, 45, 116, 146
Bsc4I	CCNNNNNNNGG	1 cut(s)	1735
Bse1I	ACTGG	5 cut(s)	221, 680, 775, 1302, 1841
Bse3DI	GCAATG	2 cut(s)	903, 1812
Bse8I	GATNNNNATC	1 cut(s)	329
BseAI	TCCGGA	1 cut(s)	153
BseBI	CCWGG	1 cut(s)	454
BseGI	GGATG	8 cut(s)	165, 393, 601, 1104, 1204, 1242, 1360, 2189
BseJI	GATNNNNATC	1 cut(s)	329
BseLI	CCNNNNNNNGG	1 cut(s)	1735
BseMI	GCAATG	2 cut(s)	903, 1812
BseMII	CTCAG	1 cut(s)	32
BseNI	ACTGG	5 cut(s)	221, 680, 775, 1302, 1841
BseRI	GAGGAG	1 cut(s)	20
BseSI	GKGCMC	1 cut(s)	1106
BseXI	GCAGC	7 cut(s)	591, 623, 1381, 1440, 1457, 1813, 1919
BseYI	CCCAGC	1 cut(s)	576
BsgI	GTGCAG	2 cut(s)	630, 1926
Bsh1236I	CGCG	2 cut(s)	243, 480
BshFI	GGCC	6 cut(s)	150, 581, 1153, 1413, 1728, 1938
BsiHKAI	GWGCWC	4 cut(s)	285, 415, 1106, 1707
BsiSI	CCGG	5 cut(s)	154, 310, 382, 1150, 1574
BslI	CCNNNNNNNGG	1 cut(s)	1735
BsmAI	GTCTC	4 cut(s)	103, 156, 229, 1378
BsmBI	CGTCTC	2 cut(s)	103, 229
BsnI	GGCC	6 cut(s)	150, 581, 1153, 1413, 1728, 1938
Bsp119I	TTCGAA	2 cut(s)	492, 2013
Bsp1286I	GDGCHC	6 cut(s)	285, 415, 778, 1106, 1707, 2085
Bsp13I	TCCGGA	1 cut(s)	153
BspANI	GGCC	6 cut(s)	150, 581, 1153, 1413, 1728, 1938
BspCNI	CTCAG	1 cut(s)	31
BspEI	TCCGGA	1 cut(s)	153
BspFNI	CGCG	2 cut(s)	243, 480
BspHI	TCATGA	1 cut(s)	1971
BspLI	GGNNCC	1 cut(s)	1300
BspMAI	CTGCAG	2 cut(s)	1831, 2130
BspMI	ACCTGC	1 cut(s)	554
BspPI	GGATC	4 cut(s)	369, 670, 1293, 1306
BspT104I	TTCGAA	2 cut(s)	492, 2013
BsrBI	CCGCTC	1 cut(s)	990
BsrDI	GCAATG	2 cut(s)	903, 1812
BsrI	ACTGG	5 cut(s)	221, 680, 775, 1302, 1841
BssNI	GRCGYC	3 cut(s)	114, 231, 1115
Bst2UI	CCWGG	1 cut(s)	454
Bst4CI	ACNGT	6 cut(s)	368, 410, 885, 1074, 1631, 1734
BstACI	GRCGYC	3 cut(s)	114, 231, 1115
BstBAI	YACGTR	1 cut(s)	1094
BstBI	TTCGAA	2 cut(s)	492, 2013
BstC8I	GCNNGC	6 cut(s)	281, 415, 450, 478, 609, 697
BstDEI	CTNAG	1 cut(s)	18
BstF5I	GGATG	8 cut(s)	165, 393, 601, 1104, 1204, 1242, 1360, 2189
BstFNI	CGCG	2 cut(s)	243, 480
BstH2I	RGCGCY	1 cut(s)	577
BstHHI	GCGC	2 cut(s)	553, 576
BstMAI	GTCTC	4 cut(s)	103, 156, 229, 1378
BstMWI	GCNNNNNNNGC	5 cut(s)	454, 692, 1725, 1823, 1907
BstNI	CCWGG	1 cut(s)	454
BstNSI	RCATGY	5 cut(s)	436, 604, 660, 1817, 1905
BstSCI	CCNGG	2 cut(s)	308, 452
BstSFI	CTRYAG	3 cut(s)	1714, 1827, 2126
BstSLI	GKGCMC	1 cut(s)	1106
BstUI	CGCG	2 cut(s)	243, 480
BstV1I	GCAGC	7 cut(s)	591, 623, 1381, 1440, 1457, 1813, 1919
BstV2I	GAAGAC	1 cut(s)	398
BstX2I	RGATCY	2 cut(s)	662, 1298
BstYI	RGATCY	2 cut(s)	662, 1298
BsuI	GTATCC	1 cut(s)	1892
BsuRI	GGCC	6 cut(s)	150, 581, 1153, 1413, 1728, 1938
BtgZI	GCGATG	1 cut(s)	224
BtrI	CACGTC	1 cut(s)	97
BtsCI	GGATG	8 cut(s)	165, 393, 601, 1104, 1204, 1242, 1360, 2189
BtsIMutI	CAGTG	5 cut(s)	364, 1070, 1280, 1309, 1636
BveI	ACCTGC	1 cut(s)	554
Cac8I	GCNNGC	6 cut(s)	281, 415, 450, 478, 609, 697
CaiI	CAGNNNCTG	1 cut(s)	2125
CciI	TCATGA	1 cut(s)	1971
CfoI	GCGC	2 cut(s)	553, 576
Cfr13I	GGNCC	4 cut(s)	219, 579, 725, 1726
CseI	GACGC	4 cut(s)	122, 232, 309, 1104
Csp6I	GTAC	4 cut(s)	763, 1383, 1466, 1693
CspCI	CAANNNNNGTGG	2 cut(s)	640, 675
CviQI	GTAC	4 cut(s)	763, 1383, 1466, 1693
DdeI	CTNAG	1 cut(s)	18
DrdI	GACNNNNNNGTC	1 cut(s)	221
DriI	GACNNNNNGTC	1 cut(s)	2102
DseDI	GACNNNNNNGTC	1 cut(s)	221
EaeI	YGGCCR	1 cut(s)	1411
Eam1105I	GACNNNNNGTC	1 cut(s)	2102
EciI	GGCGGA	2 cut(s)	176, 245
Eco147I	AGGCCT	1 cut(s)	1938
Eco24I	GRGCYC	2 cut(s)	778, 2085
Eco32I	GATATC	2 cut(s)	271, 2203
Eco47I	GGWCC	2 cut(s)	219, 725
Eco72I	CACGTG	1 cut(s)	1094
EcoRI	GAATTC	2 cut(s)	39, 1356
EcoRII	CCWGG	1 cut(s)	452
EcoRV	GATATC	2 cut(s)	271, 2203
EcoT22I	ATGCAT	1 cut(s)	658
EcoT38I	GRGCYC	2 cut(s)	778, 2085
Esp3I	CGTCTC	2 cut(s)	103, 229
FalI	AAGNNNNNCTT	2 cut(s)	1923, 1955
FauNDI	CATATG	1 cut(s)	1084
FbaI	TGATCA	4 cut(s)	330, 438, 469, 648
FblI	GTMKAC	1 cut(s)	105
FokI	GGATG	8 cut(s)	152, 400, 608, 1111, 1191, 1249, 1347, 2176
FriOI	GRGCYC	2 cut(s)	778, 2085
FspAI	RTGCGCAY	1 cut(s)	552
FspBI	CTAG	6 cut(s)	624, 666, 869, 1218, 1947, 2094
FspI	TGCGCA	1 cut(s)	552
GlaI	GCGC	2 cut(s)	552, 575
GsaI	CCCAGC	1 cut(s)	580
GsuI	CTGGAG	1 cut(s)	697
HaeII	RGCGCY	1 cut(s)	577
HaeIII	GGCC	6 cut(s)	150, 581, 1153, 1413, 1728, 1938
HapII	CCGG	5 cut(s)	154, 310, 382, 1150, 1574
HgaI	GACGC	4 cut(s)	122, 232, 309, 1104
HhaI	GCGC	2 cut(s)	553, 576
Hin1I	GRCGYC	3 cut(s)	114, 231, 1115
Hin6I	GCGC	2 cut(s)	551, 574
HinP1I	GCGC	2 cut(s)	551, 574
HincII	GTYRAC	2 cut(s)	106, 633
HindII	GTYRAC	2 cut(s)	106, 633
HindIII	AAGCTT	3 cut(s)	693, 789, 875
HinfI	GANTC	8 cut(s)	7, 68, 527, 739, 1577, 1745, 2116, 2236
HpaII	CCGG	5 cut(s)	154, 310, 382, 1150, 1574
HphI	GGTGA	3 cut(s)	952, 1432, 2210
Hpy166II	GTNNAC	5 cut(s)	106, 633, 1104, 1403, 1693
Hpy188I	TCNGA	5 cut(s)	229, 299, 335, 443, 2291
Hpy188III	TCNNGA	9 cut(s)	154, 208, 322, 400, 833, 1784, 1862, 1947, 1972
Hpy8I	GTNNAC	5 cut(s)	106, 633, 1104, 1403, 1693
Hpy99I	CGWCG	6 cut(s)	107, 116, 233, 236, 269, 278
HpyAV	CCTTC	7 cut(s)	88, 205, 808, 1031, 1411, 1717, 1949
HpyCH4III	ACNGT	6 cut(s)	368, 410, 885, 1074, 1631, 1734
HpyCH4IV	ACGT	3 cut(s)	96, 231, 1093
HpyF10VI	GCNNNNNNNGC	5 cut(s)	454, 692, 1725, 1823, 1907
HpyF3I	CTNAG	1 cut(s)	18
HpySE526I	ACGT	3 cut(s)	96, 231, 1093
Hsp92I	GRCGYC	3 cut(s)	114, 231, 1115
HspAI	GCGC	2 cut(s)	551, 574
Kpn2I	TCCGGA	1 cut(s)	153
Ksp22I	TGATCA	4 cut(s)	330, 438, 469, 648
LmnI	GCTCC	3 cut(s)	258, 929, 1345
Lsp1109I	GCAGC	7 cut(s)	591, 623, 1381, 1440, 1457, 1813, 1919
LweI	GCATC	5 cut(s)	511, 975, 1882, 1990, 2198
MaeI	CTAG	6 cut(s)	624, 666, 869, 1218, 1947, 2094
MaeII	ACGT	3 cut(s)	96, 231, 1093
MaeIII	GTNAC	5 cut(s)	736, 952, 1582, 1792, 1809
MbiI	CCGCTC	1 cut(s)	990
MfeI	CAATTG	5 cut(s)	974, 1003, 1476, 1547, 2063
MflI	RGATCY	2 cut(s)	662, 1298
MhlI	GDGCHC	6 cut(s)	285, 415, 778, 1106, 1707, 2085
MlsI	TGGCCA	1 cut(s)	1413
MluNI	TGGCCA	1 cut(s)	1413
MlyI	GAGTC	3 cut(s)	62, 536, 733
MmeI	TCCRAC	8 cut(s)	252, 277, 703, 1269, 1716, 1909, 2230, 2237
Mox20I	TGGCCA	1 cut(s)	1413
Mph1103I	ATGCAT	1 cut(s)	658
MroI	TCCGGA	1 cut(s)	153
MroXI	GAANNNNTTC	2 cut(s)	317, 2171
MscI	TGGCCA	1 cut(s)	1413
MseI	TTAA	5 cut(s)	689, 1020, 1125, 1287, 2070
Msp20I	TGGCCA	1 cut(s)	1413
MspA1I	CMGCKG	1 cut(s)	147
MspI	CCGG	5 cut(s)	154, 310, 382, 1150, 1574
MspR9I	CCNGG	2 cut(s)	310, 454
MunI	CAATTG	5 cut(s)	974, 1003, 1476, 1547, 2063
MvaI	CCWGG	1 cut(s)	454
MvnI	CGCG	2 cut(s)	243, 480
MwoI	GCNNNNNNNGC	5 cut(s)	454, 692, 1725, 1823, 1907
NciI	CCSGG	1 cut(s)	310
NdeI	CATATG	1 cut(s)	1084
NlaIV	GGNNCC	1 cut(s)	1300
NmeAIII	GCCGAG	1 cut(s)	550
NmuCI	GTSAC	1 cut(s)	736
NsbI	TGCGCA	1 cut(s)	552
NsiI	ATGCAT	1 cut(s)	658
NspI	RCATGY	5 cut(s)	436, 604, 660, 1817, 1905
NspV	TTCGAA	2 cut(s)	492, 2013
PagI	TCATGA	1 cut(s)	1971
PceI	AGGCCT	1 cut(s)	1938
PcsI	WCGNNNNNNNCGW	3 cut(s)	102, 240, 270
PdmI	GAANNNNTTC	2 cut(s)	317, 2171
PfeI	GAWTC	4 cut(s)	1577, 1745, 2116, 2236
PflFI	GACNNNGTC	1 cut(s)	233
PflMI	CCANNNNNTGG	1 cut(s)	1735
PleI	GAGTC	3 cut(s)	62, 535, 733
PmaCI	CACGTG	1 cut(s)	1094
PmlI	CACGTG	1 cut(s)	1094
PpsI	GAGTC	3 cut(s)	62, 535, 733
Ppu21I	YACGTR	1 cut(s)	1094
PshBI	ATTAAT	1 cut(s)	1287
Psp6I	CCWGG	1 cut(s)	452
PspCI	CACGTG	1 cut(s)	1094
PspFI	CCCAGC	1 cut(s)	576
PspGI	CCWGG	1 cut(s)	452
PspN4I	GGNNCC	1 cut(s)	1300
PspPI	GGNCC	4 cut(s)	219, 579, 725, 1726
PstI	CTGCAG	2 cut(s)	1831, 2130
PstNI	CAGNNNCTG	1 cut(s)	2125
PsuI	RGATCY	2 cut(s)	662, 1298
PsyI	GACNNNGTC	1 cut(s)	233
RsaI	GTAC	4 cut(s)	764, 1384, 1467, 1694
RsaNI	GTAC	4 cut(s)	763, 1383, 1466, 1693
SalI	GTCGAC	1 cut(s)	104
SaqAI	TTAA	5 cut(s)	689, 1020, 1125, 1287, 2070
Sau96I	GGNCC	4 cut(s)	219, 579, 725, 1726
ScaI	AGTACT	1 cut(s)	1467
SchI	GAGTC	3 cut(s)	62, 536, 733
ScrFI	CCNGG	2 cut(s)	310, 454
SduI	GDGCHC	6 cut(s)	285, 415, 778, 1106, 1707, 2085
SfaNI	GCATC	5 cut(s)	511, 975, 1882, 1990, 2198
SfcI	CTRYAG	3 cut(s)	1714, 1827, 2126
SfuI	TTCGAA	2 cut(s)	492, 2013
SinI	GGWCC	2 cut(s)	219, 725
SmlI	CTYRAG	1 cut(s)	398
SmoI	CTYRAG	1 cut(s)	398
SseBI	AGGCCT	1 cut(s)	1938
SspI	AATATT	3 cut(s)	748, 782, 853
SspMI	CTAG	6 cut(s)	624, 666, 869, 1218, 1947, 2094
StuI	AGGCCT	1 cut(s)	1938
StyD4I	CCNGG	2 cut(s)	308, 452
TaaI	ACNGT	6 cut(s)	368, 410, 885, 1074, 1631, 1734
TaiI	ACGT	3 cut(s)	99, 234, 1096
TaqI	TCGA	8 cut(s)	105, 273, 492, 559, 1622, 1760, 2013, 2211
TaqII	GACCGA	2 cut(s)	80, 618
TatI	WGTACW	2 cut(s)	1465, 1692
TauI	GCSGC	6 cut(s)	119, 150, 261, 347, 483, 1115
TfiI	GAWTC	4 cut(s)	1577, 1745, 2116, 2236
Tru1I	TTAA	5 cut(s)	689, 1020, 1125, 1287, 2070
Tru9I	TTAA	5 cut(s)	689, 1020, 1125, 1287, 2070
TscAI	CASTG	5 cut(s)	371, 1077, 1287, 1309, 1636
TseFI	GTSAC	1 cut(s)	736
TseI	GCWGC	7 cut(s)	604, 611, 1394, 1445, 1453, 1826, 1907
Tsp45I	GTSAC	1 cut(s)	736
TspGWI	ACGGA	3 cut(s)	91, 211, 818
TspRI	CASTG	5 cut(s)	371, 1077, 1287, 1309, 1636
Tth111I	GACNNNGTC	1 cut(s)	233
Van91I	CCANNNNNTGG	1 cut(s)	1735
VneI	GTGCAC	1 cut(s)	1102
VpaK11BI	GGWCC	2 cut(s)	219, 725
VspI	ATTAAT	1 cut(s)	1287
XapI	RAATTY	6 cut(s)	39, 316, 1356, 1510, 1671, 1986
XbaI	TCTAGA	1 cut(s)	1946
XceI	RCATGY	5 cut(s)	436, 604, 660, 1817, 1905
XcmI	CCANNNNNNNNNTGG	1 cut(s)	589
XmiI	GTMKAC	1 cut(s)	105
XmnI	GAANNNNTTC	2 cut(s)	317, 2171
XspI	CTAG	6 cut(s)	624, 666, 869, 1218, 1947, 2094
ZraI	GACGTC	1 cut(s)	232
ZrmI	AGTACT	1 cut(s)	1467
Zsp2I	ATGCAT	1 cut(s)	658

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.