Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0015893.1

Orthogroup ID

OG0001672

Physical Location & Seq

Genomic Coordinates Forward (+)

31948 .. 39104

Gene Structure 7157 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0015893.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2589 bp

atggccactctagtatcccagccacccctcctccaccttccgcagtccaagacccgaattctctgcaacaagcccaacaacaacagcaacaacaacaacaagaccgactcagcagcattcaaggagaagcagcacgtctccgtcgactacgacagcggcactcaccacctctccactcatatcggcggcttcaggaagcgagacatccccaaacaccaccgcttacgcgtcgaaacggagcgtttccagaaggactgggccgtctccgacgtcgtcaatcgggtctatcagctccgtcgcggtgacgacattgacggcgtgctcaatcgatgggtcggacgcttcgccaggaagaacttccccatcctgattagagaaatgacggcgagggggtcggtggagcactgtatgcaagtgttccggtggatgaagaccctcaagaactactgtgctcgcactgatatttataacatgttgatcagattgcacgccaggcatagtcttgttgatcaagctcgcggcttgtttttcgaaatgcaagaatggaggtgcaagcctgatgctgagtcctacaatgctcttatcaatgcacatggtcgagcaggtcaatggcgctgggccatgaacattatggatgacatgctgcgtgcagctatccctcctagtcggtcaacatataacaacttgatcaatgcatgtggatctagtggaaattggagagaagctttaaaagtttgcaagaaaatgacagataatggagttggacctgatcttgtgactcacaatattgttttatctgcatacaaaactggggctcaatattcaaaagctttatcttattttgaacttatgaagggaacaaatatccgtccagacacaacgaccctcaatattgttatatattgcctagtgaagcttggacagtatgggaaagccattgatattttcaattccatgagagataagggagcagaatgtcgccctgacatcgtaacattcaccagcatcattcatttgtattctgtgagcgggcagatagacaactgcacagccgtatttaatacaattcttgcagaagggctaaaacctaacattgtttcctataatgcactattaggtgcatatgcttcacatgggatgtgcacagaggcggcatcagtatttaatgagatgaagaaaagtagttttcggccagatgttgtgtcttatacatctctactcaatgcttatggaagatcacgacatcctaagaaggctagggaagtttttgacaggatgaaggccaaccacttgaagccaaaccttgtgagctacaacgcactgattaatgcctatggatccagtggtttattagccgaagctgttgaggtcttgcgtgagatggagcaaaatggaattcatccaaacattgtctcaatatgtacccttttggctgcttgcggacaatgtggccagaaggtgaaaattgatgccatactttcagcagccaagctacgaggcattgaattgaacacaattgcctataattcggctattgggagctatatgaatttgggagaacatgagaaagctataaacttgtatcaatctatgagaaagaagaaagtgaaaccggattctgttacttacaatgtgttgataagtggttgttgtaagatgtcaaaatacagtgaggcactaaccttttttgatgaaatggtggatttgaaaattcctatgtccaaagaagtctactcatctgtgctctgtgcctacaacaagaagggccaacttacggaagcggaatctgtattcaactcaatgaagatggctggatgtcctcctgatgtagttacatatactgcaatgttacatgcgtatagtgctgcagagaattgggaaaaggcttgtgagctatttcaagaaatggaaataaatggcatccaaccagatgctatcgcatgttcagctctgatgagagcttttaacaaaggaggccatccctctagagttctttttctggcagaactcatgagagaaaaagaaattcctttcaatgatgccattttctttgaaatggtttcggcttgtagcttattacaagattggagaacaacaatacaattgattaaggtaatagagccctcattccctagactttcagtcgggcttaagaatcagcttctgcagattatgggaagaagcggaaagacagaggctatgatgaagttgttctacaagataattgcatccaatggtgatatcaactttgatacttactcaattgtgttgaagaatcttttgtctgttggaagttggaggaaatatattgaggtattgcagtggatggtggatgctagagtacgaccttcaagccaaatgtatctcgatatatcctattttgcacagaaaagtggtggaacagaatatgcttctattataaatgaaagaatcgaattattgaaaagaaaagcaagggaagaagactctcgaagcaagctacgtgatactcactccacttccatgctggtacatagaacaagagcagagaaccacaggctgcttgaatcaagaatggctgttacgcatcctgtagttcctgactgctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0003824 GO:0004518 GO:0004519 GO:0005198 GO:0005488 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010239 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0022414 GO:0031425 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

862

Amino Acids

97.47

Weight (kDa)

9.22

Isoelectric Point (pI)

37.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001672)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41720 AT2G41720 AT2G41720
fragaria_vesca	FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060
malus_domestica	MD12G1080100.v1.1
prunus_persica	Prupe.7G058400_v2.0.a1 Prupe.7G058400_v2.0.a1 Prupe.7G058400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0482651
rosa_laevigata	RLG00000001090 RLG00000016982 RLG00000023335 RLG00000028152 RLG00000032501
rosa_multiflora	Rmu_sc0004946.1_g000004 Rmu_sc0006069.1_g000004 Rmu_sc0015893.1_g000010
rosa_roxburghii	Rroxscaffold_3G00229260 Rroxscaffold_3G00244090 Rroxscaffold_4G00320230 Rroxscaffold_6G00399060 Rroxscaffold_7G00168600
rosa_rugosa	Rorug03G0197600 Rorug03G0197700
rosa_samantha	Rh3AG051200 Rh3AG249000 Rh3BG052500 Rh3BG284300 Rh3CG052100 Rh3CG282200 Rh3DG052800 Rh3DG278200 Rh4BG176200 Rh6AG132300 Rh7AG450400 Rh7BG246700 Rh7BG421800 Rh7BG421900 Rh7CG470100
rosa_wichuraiana	Rw3G022490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	468, 2420
AasI	GACNNNNNNGTC	1 cut(s)	260
AatII	GACGTC	1 cut(s)	273
Acc36I	ACCTGC	1 cut(s)	593
AccBSI	CCGCTC	1 cut(s)	1029
AccI	GTMKAC	2 cut(s)	144, 1731
AccII	CGCG	3 cut(s)	228, 300, 519
AclWI	GGATC	3 cut(s)	709, 1332, 1345
AcoI	YGGCCR	3 cut(s)	3, 1190, 1450
AcsI	RAATTY	5 cut(s)	57, 1395, 1549, 1710, 2025
AcuI	CTGAAG	1 cut(s)	175
AcyI	GRCGYC	1 cut(s)	270
AfaI	GTAC	3 cut(s)	1423, 2343, 2511
AfiI	CCNNNNNNNGG	1 cut(s)	1774
AflII	CTTAAG	1 cut(s)	2150
AflIII	ACRYGT	2 cut(s)	226, 471
AhdI	GACNNNNNGTC	1 cut(s)	2141
AjiI	CACGTC	1 cut(s)	136
AjnI	CCWGG	2 cut(s)	347, 491
Alw21I	GWGCWC	5 cut(s)	324, 405, 454, 1145, 1746
Alw26I	GTCTC	4 cut(s)	142, 195, 268, 1417
Alw44I	GTGCAC	1 cut(s)	1141
AlwI	GGATC	3 cut(s)	709, 1332, 1345
AlwNI	CAGNNNCTG	1 cut(s)	2164
AoxI	GGCC	8 cut(s)	3, 258, 618, 1190, 1281, 1450, 1765, 1975
ApaLI	GTGCAC	1 cut(s)	1141
ApeKI	GCWGC	8 cut(s)	113, 130, 643, 650, 1433, 1484, 1865, 2539
ApoI	RAATTY	5 cut(s)	57, 1395, 1549, 1710, 2025
AseI	ATTAAT	1 cut(s)	1326
Asp700I	GAANNNNTTC	2 cut(s)	356, 2210
AspLEI	GCGC	1 cut(s)	615
AspS9I	GGNCC	4 cut(s)	258, 618, 764, 1765
AsuHPI	GGTGA	5 cut(s)	155, 314, 991, 1471, 2249
AsuII	TTCGAA	1 cut(s)	531
AvaII	GGWCC	1 cut(s)	764
BaeGI	GKGCMC	1 cut(s)	1145
BaeI	ACNNNNGTAYC	1 cut(s)	30
BalI	TGGCCA	2 cut(s)	5, 1452
BamHI	GGATCC	1 cut(s)	1337
BanII	GRGCYC	2 cut(s)	817, 2124
BarI	GAAGNNNNNNTAC	2 cut(s)	2198, 2230
BbsI	GAAGAC	2 cut(s)	437, 2469
Bbv12I	GWGCWC	5 cut(s)	324, 405, 454, 1145, 1746
BbvI	GCAGC	8 cut(s)	125, 142, 630, 662, 1420, 1496, 1852, 2526
BccI	CCATC	6 cut(s)	324, 371, 1375, 1801, 1986, 2320
BceAI	ACGGC	4 cut(s)	245, 331, 399, 1037
BcgI	CGANNNNNNTGC	2 cut(s)	45, 79
BciT130I	CCWGG	2 cut(s)	349, 493
BciVI	GTATCC	1 cut(s)	25
BclI	TGATCA	3 cut(s)	477, 508, 687
BcoDI	GTCTC	4 cut(s)	142, 195, 268, 1417
BfaI	CTAG	8 cut(s)	11, 663, 705, 908, 1257, 1986, 2133, 2337
BfmI	CTRYAG	3 cut(s)	1866, 2165, 2571
BfoI	RGCGCY	1 cut(s)	616
BfrI	CTTAAG	1 cut(s)	2150
BfuAI	ACCTGC	1 cut(s)	593
BfuI	GTATCC	1 cut(s)	25
Bme1390I	CCNGG	2 cut(s)	349, 493
Bme18I	GGWCC	1 cut(s)	764
BmeRI	GACNNNNNGTC	1 cut(s)	2141
BmgBI	CACGTC	1 cut(s)	136
BmgT120I	GGNCC	4 cut(s)	258, 618, 764, 1765
BmiI	GGNNCC	1 cut(s)	1339
BmrFI	CCNGG	2 cut(s)	349, 493
BmrI	ACTGGG	2 cut(s)	265, 819
BmuI	ACTGGG	2 cut(s)	265, 819
BpiI	GAAGAC	2 cut(s)	437, 2469
Bpu14I	TTCGAA	1 cut(s)	531
BpuEI	CTTGAG	1 cut(s)	422
Bsa29I	ATCGAT	1 cut(s)	328
BsaAI	YACGTR	1 cut(s)	2483
BsaHI	GRCGYC	1 cut(s)	270
BsaWI	WCCGGW	2 cut(s)	420, 1612
BsaXI	ACNNNNNCTCC	4 cut(s)	15, 45, 155, 185
Bsc4I	CCNNNNNNNGG	1 cut(s)	1774
Bse1I	ACTGG	3 cut(s)	260, 814, 1341
Bse3DI	GCAATG	1 cut(s)	1851
BseBI	CCWGG	2 cut(s)	349, 493
BseCI	ATCGAT	1 cut(s)	328
BseLI	CCNNNNNNNGG	1 cut(s)	1774
BseMI	GCAATG	1 cut(s)	1851
BseMII	CTCAG	2 cut(s)	123, 555
BseNI	ACTGG	3 cut(s)	260, 814, 1341
BseRI	GAGGAG	1 cut(s)	20
BseSI	GKGCMC	1 cut(s)	1145
BseXI	GCAGC	8 cut(s)	125, 142, 630, 662, 1420, 1496, 1852, 2526
BseYI	CCCAGC	2 cut(s)	18, 615
BsgI	GTGCAG	2 cut(s)	669, 1030
Bsh1236I	CGCG	3 cut(s)	228, 300, 519
BshFI	GGCC	8 cut(s)	5, 260, 620, 1192, 1283, 1452, 1767, 1977
BshVI	ATCGAT	1 cut(s)	328
BsiHKAI	GWGCWC	5 cut(s)	324, 405, 454, 1145, 1746
BsiSI	CCGG	2 cut(s)	421, 1613
BslI	CCNNNNNNNGG	1 cut(s)	1774
BsmAI	GTCTC	4 cut(s)	142, 195, 268, 1417
BsmBI	CGTCTC	2 cut(s)	142, 268
BsmI	GAATGC	1 cut(s)	116
BsnI	GGCC	8 cut(s)	5, 260, 620, 1192, 1283, 1452, 1767, 1977
Bsp119I	TTCGAA	1 cut(s)	531
Bsp1286I	GDGCHC	7 cut(s)	324, 405, 454, 817, 1145, 1746, 2124
Bsp143I	GATC	7 cut(s)	477, 508, 687, 701, 769, 1235, 1337
BspANI	GGCC	8 cut(s)	5, 260, 620, 1192, 1283, 1452, 1767, 1977
BspCNI	CTCAG	2 cut(s)	122, 556
BspDI	ATCGAT	1 cut(s)	328
BspFNI	CGCG	3 cut(s)	228, 300, 519
BspHI	TCATGA	1 cut(s)	2010
BspLI	GGNNCC	1 cut(s)	1339
BspMAI	CTGCAG	2 cut(s)	1870, 2169
BspMI	ACCTGC	1 cut(s)	593
BspPI	GGATC	3 cut(s)	709, 1332, 1345
BspT104I	TTCGAA	1 cut(s)	531
BspTI	CTTAAG	1 cut(s)	2150
BsrBI	CCGCTC	1 cut(s)	1029
BsrDI	GCAATG	1 cut(s)	1851
BsrI	ACTGG	3 cut(s)	260, 814, 1341
BssMI	GATC	7 cut(s)	477, 508, 687, 701, 769, 1235, 1337
BssNI	GRCGYC	1 cut(s)	270
Bst2UI	CCWGG	2 cut(s)	349, 493
Bst4CI	ACNGT	4 cut(s)	407, 449, 924, 1670
BstACI	GRCGYC	1 cut(s)	270
BstAFI	CTTAAG	1 cut(s)	2150
BstAPI	GCANNNNNTGC	1 cut(s)	409
BstBAI	YACGTR	1 cut(s)	2483
BstBI	TTCGAA	1 cut(s)	531
BstC8I	GCNNGC	9 cut(s)	320, 454, 489, 517, 554, 648, 1031, 1438, 2477
BstDEI	CTNAG	3 cut(s)	109, 564, 1248
BstFNI	CGCG	3 cut(s)	228, 300, 519
BstH2I	RGCGCY	1 cut(s)	616
BstHHI	GCGC	1 cut(s)	615
BstKTI	GATC	7 cut(s)	480, 511, 690, 704, 772, 1238, 1340
BstMAI	GTCTC	4 cut(s)	142, 195, 268, 1417
BstMBI	GATC	7 cut(s)	477, 508, 687, 701, 769, 1235, 1337
BstMWI	GCNNNNNNNGC	4 cut(s)	409, 493, 1862, 1946
BstNI	CCWGG	2 cut(s)	349, 493
BstNSI	RCATGY	5 cut(s)	475, 643, 699, 1856, 1944
BstSCI	CCNGG	2 cut(s)	347, 491
BstSFI	CTRYAG	3 cut(s)	1866, 2165, 2571
BstSLI	GKGCMC	1 cut(s)	1145
BstUI	CGCG	3 cut(s)	228, 300, 519
BstV1I	GCAGC	8 cut(s)	125, 142, 630, 662, 1420, 1496, 1852, 2526
BstV2I	GAAGAC	2 cut(s)	437, 2469
BstX2I	RGATCY	2 cut(s)	701, 1337
BstYI	RGATCY	2 cut(s)	701, 1337
Bsu15I	ATCGAT	1 cut(s)	328
BsuI	GTATCC	1 cut(s)	25
BsuRI	GGCC	8 cut(s)	5, 260, 620, 1192, 1283, 1452, 1767, 1977
BsuTUI	ATCGAT	1 cut(s)	328
BtrI	CACGTC	1 cut(s)	136
BtsI	GCAGTG	1 cut(s)	2327
BtsIMutI	CAGTG	6 cut(s)	403, 456, 1319, 1348, 1675, 2327
BveI	ACCTGC	1 cut(s)	593
Cac8I	GCNNGC	9 cut(s)	320, 454, 489, 517, 554, 648, 1031, 1438, 2477
CaiI	CAGNNNCTG	1 cut(s)	2164
CciI	TCATGA	1 cut(s)	2010
CfoI	GCGC	1 cut(s)	615
Cfr13I	GGNCC	4 cut(s)	258, 618, 764, 1765
ClaI	ATCGAT	1 cut(s)	328
CseI	GACGC	2 cut(s)	217, 348
Csp6I	GTAC	3 cut(s)	1422, 2342, 2510
CspCI	CAANNNNNGTGG	2 cut(s)	679, 714
CviQI	GTAC	3 cut(s)	1422, 2342, 2510
DdeI	CTNAG	3 cut(s)	109, 564, 1248
DpnI	GATC	7 cut(s)	479, 510, 689, 703, 771, 1237, 1339
DpnII	GATC	7 cut(s)	477, 508, 687, 701, 769, 1235, 1337
DraI	TTTAAA	1 cut(s)	729
DrdI	GACNNNNNNGTC	1 cut(s)	260
DriI	GACNNNNNGTC	1 cut(s)	2141
DseDI	GACNNNNNNGTC	1 cut(s)	260
EaeI	YGGCCR	3 cut(s)	3, 1190, 1450
Eam1105I	GACNNNNNGTC	1 cut(s)	2141
Eco24I	GRGCYC	2 cut(s)	817, 2124
Eco32I	GATATC	1 cut(s)	2242
Eco47I	GGWCC	1 cut(s)	764
Eco57I	CTGAAG	1 cut(s)	175
EcoRI	GAATTC	2 cut(s)	57, 1395
EcoRII	CCWGG	2 cut(s)	347, 491
EcoRV	GATATC	1 cut(s)	2242
EcoT22I	ATGCAT	1 cut(s)	697
EcoT38I	GRGCYC	2 cut(s)	817, 2124
Esp3I	CGTCTC	2 cut(s)	142, 268
FauI	CCCGC	1 cut(s)	1022
FauNDI	CATATG	1 cut(s)	1123
FbaI	TGATCA	3 cut(s)	477, 508, 687
FblI	GTMKAC	2 cut(s)	144, 1731
FriOI	GRGCYC	2 cut(s)	817, 2124
FspBI	CTAG	8 cut(s)	11, 663, 705, 908, 1257, 1986, 2133, 2337
GlaI	GCGC	1 cut(s)	614
GsaI	CCCAGC	2 cut(s)	22, 619
HaeII	RGCGCY	1 cut(s)	616
HaeIII	GGCC	8 cut(s)	5, 260, 620, 1192, 1283, 1452, 1767, 1977
HapII	CCGG	2 cut(s)	421, 1613
HgaI	GACGC	2 cut(s)	217, 348
HhaI	GCGC	1 cut(s)	615
Hin1I	GRCGYC	1 cut(s)	270
Hin6I	GCGC	1 cut(s)	613
HinP1I	GCGC	1 cut(s)	613
HincII	GTYRAC	2 cut(s)	145, 672
HindII	GTYRAC	2 cut(s)	145, 672
HindIII	AAGCTT	3 cut(s)	723, 828, 914
HpaII	CCGG	2 cut(s)	421, 1613
HphI	GGTGA	5 cut(s)	155, 314, 991, 1471, 2249
Hpy166II	GTNNAC	4 cut(s)	145, 672, 1143, 1732
Hpy188I	TCNGA	4 cut(s)	268, 338, 482, 1953
Hpy8I	GTNNAC	4 cut(s)	145, 672, 1143, 1732
Hpy99I	CGWCG	5 cut(s)	146, 233, 272, 275, 300
HpyAV	CCTTC	9 cut(s)	47, 244, 847, 1070, 1246, 1273, 1450, 1756, 2358
HpyCH4III	ACNGT	4 cut(s)	407, 449, 924, 1670
HpyCH4IV	ACGT	3 cut(s)	135, 270, 2482
HpyF10VI	GCNNNNNNNGC	4 cut(s)	409, 493, 1862, 1946
HpyF3I	CTNAG	3 cut(s)	109, 564, 1248
HpySE526I	ACGT	3 cut(s)	135, 270, 2482
Hsp92I	GRCGYC	1 cut(s)	270
HspAI	GCGC	1 cut(s)	613
Ksp22I	TGATCA	3 cut(s)	477, 508, 687
Kzo9I	GATC	7 cut(s)	477, 508, 687, 701, 769, 1235, 1337
LmnI	GCTCC	6 cut(s)	238, 297, 400, 968, 1384, 1539
Lsp1109I	GCAGC	8 cut(s)	125, 142, 630, 662, 1420, 1496, 1852, 2526
MaeI	CTAG	8 cut(s)	11, 663, 705, 908, 1257, 1986, 2133, 2337
MaeII	ACGT	3 cut(s)	135, 270, 2482
MaeIII	GTNAC	7 cut(s)	302, 775, 991, 1621, 1831, 1848, 2560
MalI	GATC	7 cut(s)	479, 510, 689, 703, 771, 1237, 1339
MbiI	CCGCTC	1 cut(s)	1029
MboI	GATC	7 cut(s)	477, 508, 687, 701, 769, 1235, 1337
MfeI	CAATTG	3 cut(s)	1515, 2102, 2262
MflI	RGATCY	2 cut(s)	701, 1337
MhlI	GDGCHC	7 cut(s)	324, 405, 454, 817, 1145, 1746, 2124
MlsI	TGGCCA	2 cut(s)	5, 1452
MluI	ACGCGT	1 cut(s)	226
MluNI	TGGCCA	2 cut(s)	5, 1452
MlyI	GAGTC	4 cut(s)	101, 575, 772, 2459
MmeI	TCCRAC	6 cut(s)	291, 316, 742, 1948, 2269, 2276
Mox20I	TGGCCA	2 cut(s)	5, 1452
Mph1103I	ATGCAT	1 cut(s)	697
MroXI	GAANNNNTTC	2 cut(s)	356, 2210
MscI	TGGCCA	2 cut(s)	5, 1452
MseI	TTAA	7 cut(s)	728, 1059, 1164, 1326, 1965, 2109, 2151
MslI	CAYNNNNRTG	1 cut(s)	2501
Msp20I	TGGCCA	2 cut(s)	5, 1452
MspA1I	CMGCKG	1 cut(s)	156
MspCI	CTTAAG	1 cut(s)	2150
MspI	CCGG	2 cut(s)	421, 1613
MspR9I	CCNGG	2 cut(s)	349, 493
MunI	CAATTG	3 cut(s)	1515, 2102, 2262
Mva1269I	GAATGC	1 cut(s)	116
MvaI	CCWGG	2 cut(s)	349, 493
MvnI	CGCG	3 cut(s)	228, 300, 519
MwoI	GCNNNNNNNGC	4 cut(s)	409, 493, 1862, 1946
NdeI	CATATG	1 cut(s)	1123
NdeII	GATC	7 cut(s)	477, 508, 687, 701, 769, 1235, 1337
NlaIV	GGNNCC	1 cut(s)	1339
NmuCI	GTSAC	2 cut(s)	302, 775
NsiI	ATGCAT	1 cut(s)	697
NspI	RCATGY	5 cut(s)	475, 643, 699, 1856, 1944
NspV	TTCGAA	1 cut(s)	531
PagI	TCATGA	1 cut(s)	2010
PciI	ACATGT	1 cut(s)	471
PcsI	WCGNNNNNNNCGW	1 cut(s)	141
PctI	GAATGC	1 cut(s)	116
PdmI	GAANNNNTTC	2 cut(s)	356, 2210
PfeI	GAWTC	6 cut(s)	1616, 1784, 2155, 2275, 2430, 2546
PflFI	GACNNNGTC	1 cut(s)	272
PleI	GAGTC	4 cut(s)	101, 574, 772, 2459
PpsI	GAGTC	4 cut(s)	101, 574, 772, 2459
Ppu21I	YACGTR	1 cut(s)	2483
PscI	ACATGT	1 cut(s)	471
PshBI	ATTAAT	1 cut(s)	1326
PsiI	TTATAA	2 cut(s)	468, 2420
Psp6I	CCWGG	2 cut(s)	347, 491
PspFI	CCCAGC	2 cut(s)	18, 615
PspGI	CCWGG	2 cut(s)	347, 491
PspN4I	GGNNCC	1 cut(s)	1339
PspPI	GGNCC	4 cut(s)	258, 618, 764, 1765
PstI	CTGCAG	2 cut(s)	1870, 2169
PstNI	CAGNNNCTG	1 cut(s)	2164
PsuI	RGATCY	2 cut(s)	701, 1337
PsyI	GACNNNGTC	1 cut(s)	272
RsaI	GTAC	3 cut(s)	1423, 2343, 2511
RsaNI	GTAC	3 cut(s)	1422, 2342, 2510
RseI	CAYNNNNRTG	1 cut(s)	2501
SalI	GTCGAC	1 cut(s)	143
SaqAI	TTAA	7 cut(s)	728, 1059, 1164, 1326, 1965, 2109, 2151
Sau3AI	GATC	7 cut(s)	477, 508, 687, 701, 769, 1235, 1337
Sau96I	GGNCC	4 cut(s)	258, 618, 764, 1765
SchI	GAGTC	4 cut(s)	101, 575, 772, 2459
ScrFI	CCNGG	2 cut(s)	349, 493
SduI	GDGCHC	7 cut(s)	324, 405, 454, 817, 1145, 1746, 2124
SfcI	CTRYAG	3 cut(s)	1866, 2165, 2571
SfuI	TTCGAA	1 cut(s)	531
SinI	GGWCC	1 cut(s)	764
SmiMI	CAYNNNNRTG	1 cut(s)	2501
SmlI	CTYRAG	2 cut(s)	437, 2150
SmoI	CTYRAG	2 cut(s)	437, 2150
SspI	AATATT	3 cut(s)	787, 821, 892
SspMI	CTAG	8 cut(s)	11, 663, 705, 908, 1257, 1986, 2133, 2337
StyD4I	CCNGG	2 cut(s)	347, 491
TaaI	ACNGT	4 cut(s)	407, 449, 924, 1670
TaiI	ACGT	3 cut(s)	138, 273, 2485
TaqI	TCGA	8 cut(s)	144, 231, 328, 531, 598, 2367, 2433, 2470
TaqII	GACCGA	2 cut(s)	119, 657
TauI	GCSGC	4 cut(s)	159, 189, 522, 1154
TfiI	GAWTC	6 cut(s)	1616, 1784, 2155, 2275, 2430, 2546
Tru1I	TTAA	7 cut(s)	728, 1059, 1164, 1326, 1965, 2109, 2151
Tru9I	TTAA	7 cut(s)	728, 1059, 1164, 1326, 1965, 2109, 2151
TscAI	CASTG	6 cut(s)	410, 463, 1326, 1348, 1675, 2327
TseFI	GTSAC	2 cut(s)	302, 775
TseI	GCWGC	8 cut(s)	113, 130, 643, 650, 1433, 1484, 1865, 2539
Tsp45I	GTSAC	2 cut(s)	302, 775
TspGWI	ACGGA	5 cut(s)	130, 251, 284, 857, 1790
TspRI	CASTG	6 cut(s)	410, 463, 1326, 1348, 1675, 2327
Tth111I	GACNNNGTC	1 cut(s)	272
Vha464I	CTTAAG	1 cut(s)	2150
VneI	GTGCAC	1 cut(s)	1141
VpaK11BI	GGWCC	1 cut(s)	764
VspI	ATTAAT	1 cut(s)	1326
XapI	RAATTY	5 cut(s)	57, 1395, 1549, 1710, 2025
XbaI	TCTAGA	1 cut(s)	1985
XceI	RCATGY	5 cut(s)	475, 643, 699, 1856, 1944
XcmI	CCANNNNNNNNNTGG	2 cut(s)	628, 2503
XmiI	GTMKAC	2 cut(s)	144, 1731
XmnI	GAANNNNTTC	2 cut(s)	356, 2210
XspI	CTAG	8 cut(s)	11, 663, 705, 908, 1257, 1986, 2133, 2337
ZraI	GACGTC	1 cut(s)	271
Zsp2I	ATGCAT	1 cut(s)	697

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.