Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0001672

Physical Location & Seq

Genomic Coordinates Forward (+)

28205802 .. 28213631

Gene Structure 7830 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG278200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

ATGACAGATAATGGAGTTGGACCTGATCTTGTGACTCACAATATTGTTTTATCTGCATACAAAACTGGGGCTCAATATTCAAAAGCTTTATCTTATTTTGAACTTATGAAGGGAACAAATATCCGTCCAGACACAACGACCCTCAATATTGTTATATATTGCCTAGTGAAGCTTGGACAGTATGGGAAAGCCATTGATATTTTCAATTCCATGAGAGATAAGGGAGCAGAATGTCGCCCTGACATTGTAACATTCACCAGCATCATTCATTTGTATTCTGTGAGCGGGCAGATAGACAACTGCACAGCCGTATTTAATACAATTCTTGCAGAAGGGCTAAAACCTAACATTGTTTCCTATAATGCACTATTAGGTGCATATGCTTCACATGGGATGTGCACAGAGGCGGCATCAGTATTTAATGAGATGAAGAAAAGTAGTTTTCGGCCAGATGTTGTGTCTTATACATCTCTACTCAATGCTTATGGAAGATCACGACATCCTAAGAAGGCTAGGGAAGTTTTTGACAGGATGAAGGCCAACCACTTGAAGCCAAACCTTGTGAGCTACAACGCACTGATTAATGCTTATGGATCCAGTGGTTTATTAGCCGAGGCTGTTGAGGTCTTGCGTGAGATGGAGCAAAATGGAATTCATCCAAACATTGTCTCAATATGTACCCTTTTGGCTGCTTGCGGACAATGTGGCCAGAAGGTGAAAATTGATGCCATACTTTCAGCAGCCAAGCTACGAGGCATTGAACTGAACACAATTGCCTATAATTCGGCTATTGGGAGCTTTATGAATTTGGGAGAACATGAGAAAGCTATAAACTTGTATCAATCTATGAGAAAGAAGAAAGTGAAACCGGATTCTGTTACTTACAATGTGTTGATAAGTGGTTGTTGTAAGATGTCAAAATACAGTGAGGCACTAACCTTTTTTGATGAAATGGTGGATTTGAAAATTCCTATGTCCAAAGAAGTCTACTCATCTGTGCTCTGTGCCTACAACAAGAAGGGCCAACTTACGGAAGCGGAATCTGTATTCAACTCAATGAAGATGGCTGGATGTCCTCCTGATGTAGTTACATATACTGCAATGTTACATGCGTATAGTGCTGCAGAGAATTGGGAAAAGGCTTGTGAGCTATTTCAAGAAATGGAAATAAATGGCATCCAACCAGATGCTATCGCATGTTCAGCTCTGATGAGAGTTTTTAACAAAGGAGGCCATCCCTCTAGAGTTCTTTTTCTGGCAGAACTCATGAGAGAAAAAGAAATTCCTTTCAATGATGCCATTTTCTTTGAAATGGTTTCGGCTTGTAGCTTATTACAAGATTGGAGAACAACAATACAATTGATTAAGGTAATAGAGCCCTCATTCCCTAGACTTTCAGTCGGGCTTAAGAATCAGCTCCTGCAGATTATGGGAAGAAGCGGAAAGACAGAGGCTATGATGAAGTTGTTCTACAAGATAATTGCATCCAATGGTGATATCAACTTTGATACTTACTCAATTTTGTTGAAGAATCTTTTGTCTGTTGGAAGTTGGAGGAAATATATTGAGGTATTGCAGTGGATGGTGGATGCTAGAGTACGACCTTCAAGCCAAATGTATCTCGATATATCCTGTTTTGCACGGAAAAGTGGTGGAACTGAATATGCTTCTATTATAAATGAAAGAATCGAATTATTGAAAAGAAAAGCAAGGGAAGAAGACTCTCGAAGCAAGCTACGTGATACTCACTCCACTTCCATGCTGGTACATAGAACAAGAGCAGAGAACCACAGGCTGCTTGAATCAAGAATGGCTGTTACGCATCCTGTAGTTCCTGACTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0003824 GO:0004518 GO:0004519 GO:0005198 GO:0005488 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010239 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0022414 GO:0031425 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

614

Amino Acids

68.61

Weight (kDa)

8.79

Isoelectric Point (pI)

36.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	8 - 57	6.5e-07	PPR repeat family
PPR_long	PF17177	27 - 160	4e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	67 - 127	1.6e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	80 - 120	5.2e-06	PPR repeat family
PPR_1	PF12854	112 - 144	7.1e-06	PPR repeat
PPR_2	PF13041	115 - 162	3.4e-15	PPR repeat family
PPR	PF01535	118 - 147	1.3e-07	PPR repeat
PPR_long	PF17177	135 - 246	2.2e-10	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	138 - 198	1.4e-18	Pentatricopeptide repeat domain
PPR_1	PF12854	148 - 179	1e-05	PPR repeat
PPR_2	PF13041	150 - 196	6.3e-13	PPR repeat family
PPR	PF01535	153 - 181	7.8e-07	PPR repeat
TPR_24	PF23276	158 - 283	1.2e-11	Fungal tetratrico peptide repeats
PPR_1	PF12854	182 - 214	8.2e-10	PPR repeat
PPR_2	PF13041	185 - 232	6.3e-12	PPR repeat family
PPR	PF01535	188 - 218	1.1e-08	PPR repeat
PPR_3	PF13812	244 - 304	3.2e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	256 - 304	8.9e-17	PPR repeat family
PPR_long	PF17177	273 - 417	1.6e-15	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	287 - 319	1.8e-10	PPR repeat
PPR_2	PF13041	290 - 333	7.7e-10	PPR repeat family
PPR	PF01535	293 - 321	1.5e-08	PPR repeat
PPR_3	PF13812	315 - 372	4.3e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	329 - 372	9.4e-12	PPR repeat family
PPR_1	PF12854	357 - 389	6.3e-08	PPR repeat
PPR_3	PF13812	360 - 407	6.4e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	360 - 407	1.4e-12	PPR repeat family
PPR	PF01535	363 - 393	2.5e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001672)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41720 AT2G41720 AT2G41720
fragaria_vesca	FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060
malus_domestica	MD12G1080100.v1.1
prunus_persica	Prupe.7G058400_v2.0.a1 Prupe.7G058400_v2.0.a1 Prupe.7G058400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0482651
rosa_laevigata	RLG00000001090 RLG00000016982 RLG00000023335 RLG00000028152 RLG00000032501
rosa_multiflora	Rmu_sc0004946.1_g000004 Rmu_sc0006069.1_g000004 Rmu_sc0015893.1_g000010
rosa_roxburghii	Rroxscaffold_3G00229260 Rroxscaffold_3G00244090 Rroxscaffold_4G00320230 Rroxscaffold_6G00399060 Rroxscaffold_7G00168600
rosa_rugosa	Rorug03G0197600 Rorug03G0197700
rosa_samantha	Rh3AG051200 Rh3AG249000 Rh3BG052500 Rh3BG284300 Rh3CG052100 Rh3CG282200 Rh3DG052800 Rh3DG278200 Rh4BG176200 Rh6AG132300 Rh7AG450400 Rh7BG246700 Rh7BG421800 Rh7BG421900 Rh7CG470100
rosa_wichuraiana	Rw3G022490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1676
AccBSI	CCGCTC	1 cut(s)	285
AccI	GTMKAC	1 cut(s)	987
AciI	CCGC	5 cut(s)	285, 407, 696, 1037, 1440
AclWI	GGATC	2 cut(s)	588, 601
AcoI	YGGCCR	2 cut(s)	446, 706
AcsI	RAATTY	4 cut(s)	651, 805, 966, 1281
AfaI	GTAC	3 cut(s)	679, 1599, 1767
AfiI	CCNNNNNNNGG	1 cut(s)	1030
AflII	CTTAAG	1 cut(s)	1406
AhdI	GACNNNNNGTC	1 cut(s)	1397
Alw21I	GWGCWC	2 cut(s)	401, 1002
Alw26I	GTCTC	1 cut(s)	673
Alw44I	GTGCAC	1 cut(s)	397
AlwI	GGATC	2 cut(s)	588, 601
AlwNI	CAGNNNCTG	1 cut(s)	1420
AoxI	GGCC	5 cut(s)	446, 537, 706, 1021, 1231
ApaLI	GTGCAC	1 cut(s)	397
ApeKI	GCWGC	4 cut(s)	689, 740, 1121, 1795
ApoI	RAATTY	4 cut(s)	651, 805, 966, 1281
AseI	ATTAAT	1 cut(s)	582
Asp700I	GAANNNNTTC	1 cut(s)	1466
AspS9I	GGNCC	2 cut(s)	20, 1021
AsuHPI	GGTGA	3 cut(s)	247, 727, 1505
AvaII	GGWCC	1 cut(s)	20
BaeGI	GKGCMC	1 cut(s)	401
BalI	TGGCCA	1 cut(s)	708
BamHI	GGATCC	1 cut(s)	593
BanII	GRGCYC	2 cut(s)	73, 1380
BarI	GAAGNNNNNNTAC	2 cut(s)	1454, 1486
BbsI	GAAGAC	1 cut(s)	1725
Bbv12I	GWGCWC	2 cut(s)	401, 1002
BbvI	GCAGC	4 cut(s)	676, 752, 1108, 1782
BccI	CCATC	4 cut(s)	631, 1057, 1242, 1576
BceAI	ACGGC	1 cut(s)	293
BcoDI	GTCTC	1 cut(s)	673
BfaI	CTAG	5 cut(s)	164, 513, 1242, 1389, 1593
BfmI	CTRYAG	3 cut(s)	1122, 1421, 1827
BfrI	CTTAAG	1 cut(s)	1406
BisI	GCNGC	5 cut(s)	408, 690, 741, 1122, 1796
BlsI	GCNGC	5 cut(s)	409, 691, 742, 1123, 1797
Bme18I	GGWCC	1 cut(s)	20
BmeRI	GACNNNNNGTC	1 cut(s)	1397
BmgT120I	GGNCC	2 cut(s)	20, 1021
BmiI	GGNNCC	1 cut(s)	595
BmrI	ACTGGG	1 cut(s)	75
BmsI	GCATC	9 cut(s)	270, 419, 715, 1177, 1185, 1285, 1493, 1579, 1831
BmuI	ACTGGG	1 cut(s)	75
BpiI	GAAGAC	1 cut(s)	1725
BsaAI	YACGTR	1 cut(s)	1739
BsaJI	CCNNGG	1 cut(s)	612
BsaWI	WCCGGW	1 cut(s)	868
Bsc4I	CCNNNNNNNGG	1 cut(s)	1030
Bse1I	ACTGG	2 cut(s)	70, 597
Bse3DI	GCAATG	1 cut(s)	1107
BseDI	CCNNGG	1 cut(s)	612
BseLI	CCNNNNNNNGG	1 cut(s)	1030
BseMI	GCAATG	1 cut(s)	1107
BseNI	ACTGG	2 cut(s)	70, 597
BseSI	GKGCMC	1 cut(s)	401
BseXI	GCAGC	4 cut(s)	676, 752, 1108, 1782
BsgI	GTGCAG	1 cut(s)	286
BshFI	GGCC	5 cut(s)	448, 539, 708, 1023, 1233
BsiHKAI	GWGCWC	2 cut(s)	401, 1002
BsiSI	CCGG	1 cut(s)	869
BslI	CCNNNNNNNGG	1 cut(s)	1030
BsmAI	GTCTC	1 cut(s)	673
BsnI	GGCC	5 cut(s)	448, 539, 708, 1023, 1233
Bsp1286I	GDGCHC	4 cut(s)	73, 401, 1002, 1380
Bsp143I	GATC	3 cut(s)	25, 491, 593
BspACI	CCGC	5 cut(s)	285, 407, 696, 1037, 1440
BspANI	GGCC	5 cut(s)	448, 539, 708, 1023, 1233
BspHI	TCATGA	1 cut(s)	1266
BspLI	GGNNCC	1 cut(s)	595
BspMAI	CTGCAG	2 cut(s)	1126, 1425
BspPI	GGATC	2 cut(s)	588, 601
BspTI	CTTAAG	1 cut(s)	1406
BsrBI	CCGCTC	1 cut(s)	285
BsrDI	GCAATG	1 cut(s)	1107
BsrI	ACTGG	2 cut(s)	70, 597
BssECI	CCNNGG	1 cut(s)	612
BssMI	GATC	3 cut(s)	25, 491, 593
Bst4CI	ACNGT	2 cut(s)	180, 926
BstAFI	CTTAAG	1 cut(s)	1406
BstBAI	YACGTR	1 cut(s)	1739
BstC8I	GCNNGC	3 cut(s)	287, 694, 1733
BstDEI	CTNAG	1 cut(s)	504
BstKTI	GATC	3 cut(s)	28, 494, 596
BstMAI	GTCTC	1 cut(s)	673
BstMBI	GATC	3 cut(s)	25, 491, 593
BstMWI	GCNNNNNNNGC	2 cut(s)	1118, 1202
BstNSI	RCATGY	2 cut(s)	1112, 1200
BstSFI	CTRYAG	3 cut(s)	1122, 1421, 1827
BstSLI	GKGCMC	1 cut(s)	401
BstV1I	GCAGC	4 cut(s)	676, 752, 1108, 1782
BstV2I	GAAGAC	1 cut(s)	1725
BstX2I	RGATCY	1 cut(s)	593
BstYI	RGATCY	1 cut(s)	593
BsuRI	GGCC	5 cut(s)	448, 539, 708, 1023, 1233
BtsI	GCAGTG	1 cut(s)	1583
BtsIMutI	CAGTG	4 cut(s)	575, 604, 931, 1583
Cac8I	GCNNGC	3 cut(s)	287, 694, 1733
CaiI	CAGNNNCTG	1 cut(s)	1420
CciI	TCATGA	1 cut(s)	1266
Cfr13I	GGNCC	2 cut(s)	20, 1021
Csp6I	GTAC	3 cut(s)	678, 1598, 1766
CviAII	CATG	7 cut(s)	211, 389, 818, 1109, 1197, 1267, 1759
CviQI	GTAC	3 cut(s)	678, 1598, 1766
DdeI	CTNAG	1 cut(s)	504
DpnI	GATC	3 cut(s)	27, 493, 595
DpnII	GATC	3 cut(s)	25, 491, 593
DriI	GACNNNNNGTC	1 cut(s)	1397
EaeI	YGGCCR	2 cut(s)	446, 706
Eam1105I	GACNNNNNGTC	1 cut(s)	1397
Eco24I	GRGCYC	2 cut(s)	73, 1380
Eco32I	GATATC	1 cut(s)	1498
Eco47I	GGWCC	1 cut(s)	20
EcoRI	GAATTC	1 cut(s)	651
EcoRV	GATATC	1 cut(s)	1498
EcoT38I	GRGCYC	2 cut(s)	73, 1380
FaeI	CATG	7 cut(s)	214, 392, 821, 1112, 1200, 1270, 1762
FatI	CATG	7 cut(s)	210, 388, 817, 1108, 1196, 1266, 1758
FauI	CCCGC	1 cut(s)	278
FauNDI	CATATG	1 cut(s)	379
FblI	GTMKAC	1 cut(s)	987
Fnu4HI	GCNGC	5 cut(s)	408, 690, 741, 1122, 1796
FriOI	GRGCYC	2 cut(s)	73, 1380
Fsp4HI	GCNGC	5 cut(s)	408, 690, 741, 1122, 1796
FspBI	CTAG	5 cut(s)	164, 513, 1242, 1389, 1593
GluI	GCNGC	5 cut(s)	408, 690, 741, 1122, 1796
HaeIII	GGCC	5 cut(s)	448, 539, 708, 1023, 1233
HapII	CCGG	1 cut(s)	869
Hin1II	CATG	7 cut(s)	214, 392, 821, 1112, 1200, 1270, 1762
HindIII	AAGCTT	2 cut(s)	84, 170
HinfI	GANTC	8 cut(s)	34, 872, 1040, 1411, 1531, 1686, 1721, 1802
HpaII	CCGG	1 cut(s)	869
HphI	GGTGA	3 cut(s)	247, 727, 1505
Hpy166II	GTNNAC	2 cut(s)	399, 988
Hpy188I	TCNGA	1 cut(s)	1209
Hpy8I	GTNNAC	2 cut(s)	399, 988
HpyAV	CCTTC	7 cut(s)	103, 326, 502, 529, 706, 1012, 1614
HpyCH4III	ACNGT	2 cut(s)	180, 926
HpyCH4IV	ACGT	1 cut(s)	1738
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1118, 1202
HpyF3I	CTNAG	1 cut(s)	504
HpySE526I	ACGT	1 cut(s)	1738
Hsp92II	CATG	7 cut(s)	214, 392, 821, 1112, 1200, 1270, 1762
Kzo9I	GATC	3 cut(s)	25, 491, 593
LmnI	GCTCC	4 cut(s)	224, 640, 795, 1422
Lsp1109I	GCAGC	4 cut(s)	676, 752, 1108, 1782
LweI	GCATC	9 cut(s)	270, 419, 715, 1177, 1185, 1285, 1493, 1579, 1831
MaeI	CTAG	5 cut(s)	164, 513, 1242, 1389, 1593
MaeII	ACGT	1 cut(s)	1738
MaeIII	GTNAC	6 cut(s)	31, 247, 877, 1087, 1104, 1816
MalI	GATC	3 cut(s)	27, 493, 595
MbiI	CCGCTC	1 cut(s)	285
MboI	GATC	3 cut(s)	25, 491, 593
MboII	GAAGA	8 cut(s)	442, 501, 868, 1072, 1446, 1540, 1727, 1730
MfeI	CAATTG	2 cut(s)	771, 1358
MflI	RGATCY	1 cut(s)	593
MhlI	GDGCHC	4 cut(s)	73, 401, 1002, 1380
MlsI	TGGCCA	1 cut(s)	708
MluNI	TGGCCA	1 cut(s)	708
MlyI	GAGTC	2 cut(s)	28, 1715
MmeI	TCCRAC	3 cut(s)	1204, 1525, 1532
Mox20I	TGGCCA	1 cut(s)	708
MroXI	GAANNNNTTC	1 cut(s)	1466
MscI	TGGCCA	1 cut(s)	708
MseI	TTAA	6 cut(s)	315, 420, 582, 1221, 1365, 1407
MslI	CAYNNNNRTG	1 cut(s)	1757
Msp20I	TGGCCA	1 cut(s)	708
MspCI	CTTAAG	1 cut(s)	1406
MspI	CCGG	1 cut(s)	869
MunI	CAATTG	2 cut(s)	771, 1358
MwoI	GCNNNNNNNGC	2 cut(s)	1118, 1202
NdeI	CATATG	1 cut(s)	379
NdeII	GATC	3 cut(s)	25, 491, 593
NlaIII	CATG	7 cut(s)	214, 392, 821, 1112, 1200, 1270, 1762
NlaIV	GGNNCC	1 cut(s)	595
NmeAIII	GCCGAG	1 cut(s)	637
NmuCI	GTSAC	1 cut(s)	31
NspI	RCATGY	2 cut(s)	1112, 1200
PagI	TCATGA	1 cut(s)	1266
PdmI	GAANNNNTTC	1 cut(s)	1466
PfeI	GAWTC	6 cut(s)	872, 1040, 1411, 1531, 1686, 1802
PkrI	GCNGC	5 cut(s)	409, 691, 742, 1123, 1797
PleI	GAGTC	2 cut(s)	28, 1715
PpsI	GAGTC	2 cut(s)	28, 1715
Ppu21I	YACGTR	1 cut(s)	1739
PshBI	ATTAAT	1 cut(s)	582
PsiI	TTATAA	1 cut(s)	1676
PspN4I	GGNNCC	1 cut(s)	595
PspPI	GGNCC	2 cut(s)	20, 1021
PstI	CTGCAG	2 cut(s)	1126, 1425
PstNI	CAGNNNCTG	1 cut(s)	1420
PsuI	RGATCY	1 cut(s)	593
RsaI	GTAC	3 cut(s)	679, 1599, 1767
RsaNI	GTAC	3 cut(s)	678, 1598, 1766
RseI	CAYNNNNRTG	1 cut(s)	1757
SaqAI	TTAA	6 cut(s)	315, 420, 582, 1221, 1365, 1407
SatI	GCNGC	5 cut(s)	408, 690, 741, 1122, 1796
Sau3AI	GATC	3 cut(s)	25, 491, 593
Sau96I	GGNCC	2 cut(s)	20, 1021
SchI	GAGTC	2 cut(s)	28, 1715
SduI	GDGCHC	4 cut(s)	73, 401, 1002, 1380
SfaNI	GCATC	9 cut(s)	270, 419, 715, 1177, 1185, 1285, 1493, 1579, 1831
SfcI	CTRYAG	3 cut(s)	1122, 1421, 1827
SinI	GGWCC	1 cut(s)	20
SmiMI	CAYNNNNRTG	1 cut(s)	1757
SmlI	CTYRAG	1 cut(s)	1406
SmoI	CTYRAG	1 cut(s)	1406
SsiI	CCGC	5 cut(s)	285, 407, 696, 1037, 1440
SspI	AATATT	3 cut(s)	43, 77, 148
SspMI	CTAG	5 cut(s)	164, 513, 1242, 1389, 1593
TaaI	ACNGT	2 cut(s)	180, 926
TaiI	ACGT	1 cut(s)	1741
TaqI	TCGA	3 cut(s)	1623, 1689, 1726
TauI	GCSGC	1 cut(s)	410
TfiI	GAWTC	6 cut(s)	872, 1040, 1411, 1531, 1686, 1802
Tru1I	TTAA	6 cut(s)	315, 420, 582, 1221, 1365, 1407
Tru9I	TTAA	6 cut(s)	315, 420, 582, 1221, 1365, 1407
TscAI	CASTG	4 cut(s)	582, 604, 931, 1583
TseFI	GTSAC	1 cut(s)	31
TseI	GCWGC	4 cut(s)	689, 740, 1121, 1795
Tsp45I	GTSAC	1 cut(s)	31
TspGWI	ACGGA	3 cut(s)	113, 1046, 1657
TspRI	CASTG	4 cut(s)	582, 604, 931, 1583
Vha464I	CTTAAG	1 cut(s)	1406
VneI	GTGCAC	1 cut(s)	397
VpaK11BI	GGWCC	1 cut(s)	20
VspI	ATTAAT	1 cut(s)	582
XapI	RAATTY	4 cut(s)	651, 805, 966, 1281
XbaI	TCTAGA	1 cut(s)	1241
XceI	RCATGY	2 cut(s)	1112, 1200
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1759
XmiI	GTMKAC	1 cut(s)	987
XmnI	GAANNNNTTC	1 cut(s)	1466
XspI	CTAG	5 cut(s)	164, 513, 1242, 1389, 1593

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.