Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001672

Physical Location & Seq

Genomic Coordinates Reverse (-)

9774898 .. 9780987

Gene Structure 6090 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G058400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2562 bp

ATGGCCACCGTATCCCAGCCACCATTCCTGAACCCGACCCGTTCAACGACCCGAATTGTCTGCAAAAAACCCGCTAATAACTCATCATCCGCCTTCGAAGAGAAGAAACAGGTCTCCGTCGACTACGACCGCGGCACTCACCACATCTCCACCCGAATCCCCGGCCTTACCAAACAACACATCCCAAAACATCACCGTTTACGAGTCGAAACGGAGCGTTTTCAGAAGGACTGGGCCGTCTCCGACGTCGTCGACCGGGTCTACAAGCTCCGCCACTGGGACGACATCGAGGGCTTGCTCAATCGATGGGTTGGGCGCTTTGCTCGAAAGAACTTCCCCGTTCTCATCAAAGAAATGACGGAGAGGGGTTCAGTGGAGCACTGTGTTCGAGTGTTCGGGTGGATGAAGAACCAGAAGAACTATTGTGCTCGTACTGACATTTATAATATGATGATCAGATTGCACGCTAGGCATAATCTTGTTGATAAAGCTCGTGGCTTGTTTTTCGAAATGCAAGAATGGAGGTGCAAGCCTGATGCTGAGTCCTTCAATGCTCTTATCAATGCACATGGTCGAGCAGGTCAATGGCGTTGGGCCATGAATCTTATGGACGACATGCTGCGTGCAGCTATCCCTCCCAGTCGGTCGACATATAACAACTTGATCAATGCTTGTGGATCAAGTGGAAATTGGAGGGAAGCTTTGAAAGTTTGCAAGAAAATGACAGATAACGGAGTTGGACCCGATCTTGTGACTCACAATATTGTCTTATCTGCATACAAAACAGGGGCTCAATATTCAAAGGCTTTATCTTATTTTGAGCTTATGAAGGGAACAAATATCCGTCCAGACACAACCACCCTTAATATTGTTATTTATTGCCTTGTAAAGCTTGGACAACATGAGAAAGCCATTGATCTTTTCAATTCCATGAGAGATAAAAGAGCAGAATGTCGCCCTGATATTGTAACATTCACCAGCATCATTCATTTGTATTCTGTATGCGGGCAGATAGAAGCTTGTGCAGCTGTATTTAGTACAATGCTTGCAGAAGGCCTAAAACCCAACATTGTTTCATATAATGCACTATTAGGTGCATACGCTTCACATGGGATGAGTGAAGAGGCATTGTCAGTTTTTAATGAGATTAAGAAAAGTAGTTTCCGGCCAGATGTTGTGTCTTATACATCCTTACTCAATGCTTATGGAAGATCACGCCATCCTGAAAAGGCCAGGGAAGTATTTCACATGATGAAGAAAAACAACTTGAAGCCAAATCTTGTGAGCTATAATGCACTAATTAATGCCTATGGATCTAATGGTTTGTTAGCTGAAGCTGTAGAAGTCTTGCGTGAGATGGAGCGAGATGGAATTCATCCAAATATTGTCTCAATATGCACACTTTTGTCTGCTTGTGGACAATGCGGTCAGAAGGTGAAAATTGATGCTGTACTTTCAGCTGCCAAGCTGCGAGGCATTGAATTGAATACAATTGCATATAACTCAGCTATTGGAAGCTATATGAATTTGGGAGAACATGAGAAAGCTATAAACTTATATCAATCTATGAGAAAGAAGAAAGTTAAACCGGATTCTGTCACTTACACTGTGTTGATAAGTGGTTGTTGTAAGATGTCAAAATACAGTGAGGCAATAACTTTTTATGATGAAATGATGGATTTGAAAATTCCTTTGTCCAATGAGGTCTACTCATCTGTGATATGTGCCTACAGCAAGAAGGGCCAAATTATGGAAGCAGAATCTATATTCAATTTGATGAAAATGGCTGGTTGTCCTCCTGATGTAGTTTCATATACTGCAATGTTGCATGCATATAGTGCTGCGGAGAATTGGGAAAAGGCTTGTGCAATATTTCAAGAAATGGAAACAACTGGCATTCAACCTGATGGAATTGCATGTTCAGCTTTGATGAGAGCTTTTAACAAAGGAGGTGATCCATCCAGGGTTCTTATTCTGGCAGAACTCATGAGAGAAAAGGAAATTCCTTTCAATGATGCCATTTTCTTTGAAATGGTATCGGCCTGTAGCTTATTACAAGATTGGAGAACAACAATGGACTTGGTTAAGTTGATAGAGCCCTCACTACCTAAAGTTTCAGTTGGCCTTGTGAATCAGCTTCTGCACGTTCTGGGAAGAAGTGGAAAGATTGAGACTATGATGAAGTTATTCTTCAAGATAGTGGCATCCAGTGGTGATATCAATTTTGATACTTATGCGATTTTGTTGAAGAATCTTTTGTCTGTTGGAAGTTGGAGAAAATATATTGAGGTATTGCAATGGATGGTGGACGCCGGAATTCGACCTTCAAGCCAAATGTATCTTGATATATCATCTTTTGCACAAAAAAGTGGTGGAGCCGAATATGCTACTTTAATAAAGGAAAGAATCGAACTCTTGAAAAGAAAATCCGATCCCCAAGATTCTATAAGCAAGCTGTGTTATACTCATTCCGCCTCTTCATTGACGAGTAGAACAAAAGTCGAGAACTACAAACTGCTGGAGTCAACAATGGCTGTTACATATCCAGTTTCTGACTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0003824 GO:0004518 GO:0004519 GO:0005198 GO:0005488 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010239 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0022414 GO:0031425 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

854

Amino Acids

96.09

Weight (kDa)

8.98

Isoelectric Point (pI)

36.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001672)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41720 AT2G41720 AT2G41720
fragaria_vesca	FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060
malus_domestica	MD12G1080100.v1.1
prunus_persica	Prupe.7G058400_v2.0.a1 Prupe.7G058400_v2.0.a1 Prupe.7G058400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0482651
rosa_laevigata	RLG00000001090 RLG00000016982 RLG00000023335 RLG00000028152 RLG00000032501
rosa_multiflora	Rmu_sc0004946.1_g000004 Rmu_sc0006069.1_g000004 Rmu_sc0015893.1_g000010
rosa_roxburghii	Rroxscaffold_3G00229260 Rroxscaffold_3G00244090 Rroxscaffold_4G00320230 Rroxscaffold_6G00399060 Rroxscaffold_7G00168600
rosa_rugosa	Rorug03G0197600 Rorug03G0197700
rosa_samantha	Rh3AG051200 Rh3AG249000 Rh3BG052500 Rh3BG284300 Rh3CG052100 Rh3CG282200 Rh3DG052800 Rh3DG278200 Rh4BG176200 Rh6AG132300 Rh7AG450400 Rh7BG246700 Rh7BG421800 Rh7BG421900 Rh7CG470100
rosa_wichuraiana	Rw3G022490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	444
AasI	GACNNNNNNGTC	2 cut(s)	236, 1425
AatII	GACGTC	1 cut(s)	249
Acc36I	ACCTGC	1 cut(s)	569
AccB7I	CCANNNNNTGG	1 cut(s)	1750
AccI	GTMKAC	5 cut(s)	120, 252, 261, 647, 1707
AccII	CGCG	1 cut(s)	132
AciI	CCGC	9 cut(s)	72, 90, 130, 132, 271, 1005, 1425, 1844, 2472
AclWI	GGATC	4 cut(s)	685, 1321, 1949, 2426
AcoI	YGGCCR	2 cut(s)	3, 1166
AcsI	RAATTY	5 cut(s)	1371, 1525, 1686, 2001, 2316
AcuI	CTGAAG	1 cut(s)	1353
AcyI	GRCGYC	2 cut(s)	246, 2310
AfaI	GTAC	3 cut(s)	433, 1039, 1452
AfiI	CCNNNNNNNGG	2 cut(s)	277, 1750
AjnI	CCWGG	2 cut(s)	1232, 1961
Alw21I	GWGCWC	2 cut(s)	381, 430
Alw26I	GTCTC	4 cut(s)	118, 244, 1393, 2165
AlwI	GGATC	4 cut(s)	685, 1321, 1949, 2426
AlwNI	CAGNNNCTG	2 cut(s)	2140, 2552
ApeKI	GCWGC	6 cut(s)	619, 626, 1025, 1460, 1468, 1841
ApoI	RAATTY	5 cut(s)	1371, 1525, 1686, 2001, 2316
AseI	ATTAAT	1 cut(s)	1302
Asp700I	GAANNNNTTC	2 cut(s)	1242, 2186
AspLEI	GCGC	1 cut(s)	318
AspS9I	GGNCC	4 cut(s)	234, 594, 740, 1741
AsuC2I	CCSGG	2 cut(s)	162, 257
AsuHPI	GGTGA	6 cut(s)	131, 185, 967, 1447, 1964, 2225
AsuII	TTCGAA	2 cut(s)	96, 507
AvaII	GGWCC	1 cut(s)	740
BalI	TGGCCA	1 cut(s)	5
BanII	GRGCYC	2 cut(s)	793, 2100
BauI	CACGAG	1 cut(s)	492
Bbv12I	GWGCWC	2 cut(s)	381, 430
BbvI	GCAGC	6 cut(s)	606, 638, 1037, 1447, 1455, 1828
BccI	CCATC	8 cut(s)	300, 1227, 1351, 1361, 1669, 1901, 1966, 2296
BceAI	ACGGC	1 cut(s)	221
BcgI	CGANNNNNNTGC	4 cut(s)	42, 76, 368, 402
BciT130I	CCWGG	2 cut(s)	1234, 1963
BciVI	GTATCC	1 cut(s)	22
BclI	TGATCA	2 cut(s)	453, 663
BcnI	CCSGG	2 cut(s)	162, 257
BcoDI	GTCTC	4 cut(s)	118, 244, 1393, 2165
BfaI	CTAG	1 cut(s)	468
BfmI	CTRYAG	3 cut(s)	1338, 1729, 2044
BfoI	RGCGCY	1 cut(s)	319
BfuAI	ACCTGC	1 cut(s)	569
BfuI	GTATCC	1 cut(s)	22
BisI	GCNGC	7 cut(s)	133, 620, 627, 1026, 1461, 1469, 1842
BlsI	GCNGC	7 cut(s)	134, 621, 628, 1027, 1462, 1470, 1843
Bme1390I	CCNGG	4 cut(s)	162, 257, 1234, 1963
Bme18I	GGWCC	1 cut(s)	740
BmgT120I	GGNCC	4 cut(s)	234, 594, 740, 1741
BmiI	GGNNCC	2 cut(s)	742, 2377
BmrFI	CCNGG	4 cut(s)	162, 257, 1234, 1963
BmrI	ACTGGG	3 cut(s)	241, 286, 633
BmsI	GCATC	5 cut(s)	526, 990, 1435, 2005, 2213
BmuI	ACTGGG	3 cut(s)	241, 286, 633
BplI	GAGNNNNNCTC	2 cut(s)	1694, 1726
BpmI	CTGGAG	1 cut(s)	2540
Bpu14I	TTCGAA	2 cut(s)	96, 507
BpuMI	CCSGG	2 cut(s)	162, 257
Bsa29I	ATCGAT	1 cut(s)	304
BsaHI	GRCGYC	2 cut(s)	246, 2310
BsaI	GGTCTC	1 cut(s)	118
BsaJI	CCNNGG	4 cut(s)	130, 160, 1233, 1962
BsaWI	WCCGGW	1 cut(s)	1588
BsaXI	ACNNNNNCTCC	2 cut(s)	131, 161
Bsc4I	CCNNNNNNNGG	2 cut(s)	277, 1750
Bse1I	ACTGG	6 cut(s)	236, 281, 639, 1897, 2208, 2546
Bse3DI	GCAATG	2 cut(s)	1827, 2303
BseBI	CCWGG	2 cut(s)	1234, 1963
BseCI	ATCGAT	1 cut(s)	304
BseDI	CCNNGG	4 cut(s)	130, 160, 1233, 1962
BseLI	CCNNNNNNNGG	2 cut(s)	277, 1750
BseMI	GCAATG	2 cut(s)	1827, 2303
BseMII	CTCAG	2 cut(s)	531, 1518
BseNI	ACTGG	6 cut(s)	236, 281, 639, 1897, 2208, 2546
BseXI	GCAGC	6 cut(s)	606, 638, 1037, 1447, 1455, 1828
BseYI	CCCAGC	1 cut(s)	15
BsgI	GTGCAG	3 cut(s)	645, 1044, 2126
Bsh1236I	CGCG	1 cut(s)	132
Bsh1285I	CGRYCG	3 cut(s)	130, 256, 647
BshVI	ATCGAT	1 cut(s)	304
BsiEI	CGRYCG	3 cut(s)	130, 256, 647
BsiHKAI	GWGCWC	2 cut(s)	381, 430
BsiSI	CCGG	5 cut(s)	162, 256, 1165, 1589, 2313
BslFI	GGGAC	1 cut(s)	293
BslI	CCNNNNNNNGG	2 cut(s)	277, 1750
BsmAI	GTCTC	4 cut(s)	118, 244, 1393, 2165
BsmBI	CGTCTC	1 cut(s)	244
BsmFI	GGGAC	1 cut(s)	293
BsmI	GAATGC	1 cut(s)	1896
Bso31I	GGTCTC	1 cut(s)	118
Bsp119I	TTCGAA	2 cut(s)	96, 507
Bsp1286I	GDGCHC	4 cut(s)	381, 430, 793, 2100
Bsp143I	GATC	9 cut(s)	453, 663, 677, 745, 916, 1211, 1313, 1954, 2431
BspACI	CCGC	9 cut(s)	72, 90, 130, 132, 271, 1005, 1425, 1844, 2472
BspCNI	CTCAG	2 cut(s)	532, 1517
BspDI	ATCGAT	1 cut(s)	304
BspFNI	CGCG	1 cut(s)	132
BspHI	TCATGA	1 cut(s)	1986
BspLI	GGNNCC	2 cut(s)	742, 2377
BspMI	ACCTGC	1 cut(s)	569
BspPI	GGATC	4 cut(s)	685, 1321, 1949, 2426
BspT104I	TTCGAA	2 cut(s)	96, 507
BspTNI	GGTCTC	1 cut(s)	118
BsrDI	GCAATG	2 cut(s)	1827, 2303
BsrI	ACTGG	6 cut(s)	236, 281, 639, 1897, 2208, 2546
BssECI	CCNNGG	4 cut(s)	130, 160, 1233, 1962
BssMI	GATC	9 cut(s)	453, 663, 677, 745, 916, 1211, 1313, 1954, 2431
BssNI	GRCGYC	2 cut(s)	246, 2310
BssSI	CACGAG	1 cut(s)	492
Bst2BI	CACGAG	1 cut(s)	492
Bst2UI	CCWGG	2 cut(s)	1234, 1963
Bst4CI	ACNGT	5 cut(s)	10, 197, 383, 1609, 1646
Bst6I	CTCTTC	3 cut(s)	93, 1116, 2482
BstACI	GRCGYC	2 cut(s)	246, 2310
BstAPI	GCANNNNNTGC	1 cut(s)	1838
BstBI	TTCGAA	2 cut(s)	96, 507
BstC8I	GCNNGC	8 cut(s)	296, 465, 530, 624, 1007, 1047, 1830, 2453
BstDEI	CTNAG	2 cut(s)	540, 1504
BstDSI	CCRYGG	1 cut(s)	130
BstFNI	CGCG	1 cut(s)	132
BstH2I	RGCGCY	1 cut(s)	319
BstHHI	GCGC	1 cut(s)	318
BstKTI	GATC	9 cut(s)	456, 666, 680, 748, 919, 1214, 1316, 1957, 2434
BstMAI	GTCTC	4 cut(s)	118, 244, 1393, 2165
BstMBI	GATC	9 cut(s)	453, 663, 677, 745, 916, 1211, 1313, 1954, 2431
BstMCI	CGRYCG	3 cut(s)	130, 256, 647
BstMWI	GCNNNNNNNGC	6 cut(s)	469, 1025, 1740, 1838, 1922, 2384
BstNI	CCWGG	2 cut(s)	1234, 1963
BstNSI	RCATGY	3 cut(s)	619, 1832, 1920
BstSCI	CCNGG	4 cut(s)	160, 255, 1232, 1961
BstSFI	CTRYAG	3 cut(s)	1338, 1729, 2044
BstUI	CGCG	1 cut(s)	132
BstV1I	GCAGC	6 cut(s)	606, 638, 1037, 1447, 1455, 1828
BstX2I	RGATCY	1 cut(s)	1313
BstYI	RGATCY	1 cut(s)	1313
Bsu15I	ATCGAT	1 cut(s)	304
BsuI	GTATCC	1 cut(s)	22
BsuTUI	ATCGAT	1 cut(s)	304
BtgI	CCRYGG	1 cut(s)	130
BtsIMutI	CAGTG	6 cut(s)	274, 378, 379, 1605, 1651, 2215
BveI	ACCTGC	1 cut(s)	569
Cac8I	GCNNGC	8 cut(s)	296, 465, 530, 624, 1007, 1047, 1830, 2453
CaiI	CAGNNNCTG	2 cut(s)	2140, 2552
CciI	TCATGA	1 cut(s)	1986
CfoI	GCGC	1 cut(s)	318
Cfr13I	GGNCC	4 cut(s)	234, 594, 740, 1741
Cfr42I	CCGCGG	1 cut(s)	133
ClaI	ATCGAT	1 cut(s)	304
CseI	GACGC	1 cut(s)	2318
Csp6I	GTAC	3 cut(s)	432, 1038, 1451
CspCI	CAANNNNNGTGG	2 cut(s)	655, 690
CviQI	GTAC	3 cut(s)	432, 1038, 1451
DdeI	CTNAG	2 cut(s)	540, 1504
DpnI	GATC	9 cut(s)	455, 665, 679, 747, 918, 1213, 1315, 1956, 2433
DpnII	GATC	9 cut(s)	453, 663, 677, 745, 916, 1211, 1313, 1954, 2431
DrdI	GACNNNNNNGTC	2 cut(s)	236, 1425
DseDI	GACNNNNNNGTC	2 cut(s)	236, 1425
EaeI	YGGCCR	2 cut(s)	3, 1166
Eam1104I	CTCTTC	3 cut(s)	93, 1116, 2482
EarI	CTCTTC	3 cut(s)	93, 1116, 2482
EciI	GGCGGA	3 cut(s)	79, 260, 2461
Eco147I	AGGCCT	1 cut(s)	1056
Eco24I	GRGCYC	2 cut(s)	793, 2100
Eco31I	GGTCTC	1 cut(s)	118
Eco32I	GATATC	1 cut(s)	2218
Eco47I	GGWCC	1 cut(s)	740
Eco57I	CTGAAG	1 cut(s)	1353
EcoRI	GAATTC	2 cut(s)	1371, 2316
EcoRII	CCWGG	2 cut(s)	1232, 1961
EcoRV	GATATC	1 cut(s)	2218
EcoT22I	ATGCAT	1 cut(s)	1834
EcoT38I	GRGCYC	2 cut(s)	793, 2100
Esp3I	CGTCTC	1 cut(s)	244
FalI	AAGNNNNNCTT	2 cut(s)	2174, 2206
FaqI	GGGAC	1 cut(s)	293
FauI	CCCGC	2 cut(s)	79, 998
FbaI	TGATCA	2 cut(s)	453, 663
FblI	GTMKAC	5 cut(s)	120, 252, 261, 647, 1707
Fnu4HI	GCNGC	7 cut(s)	133, 620, 627, 1026, 1461, 1469, 1842
FriOI	GRGCYC	2 cut(s)	793, 2100
Fsp4HI	GCNGC	7 cut(s)	133, 620, 627, 1026, 1461, 1469, 1842
FspBI	CTAG	1 cut(s)	468
GlaI	GCGC	1 cut(s)	317
GluI	GCNGC	7 cut(s)	133, 620, 627, 1026, 1461, 1469, 1842
GsaI	CCCAGC	1 cut(s)	19
GsuI	CTGGAG	1 cut(s)	2540
HaeII	RGCGCY	1 cut(s)	319
HapII	CCGG	5 cut(s)	162, 256, 1165, 1589, 2313
HgaI	GACGC	1 cut(s)	2318
HhaI	GCGC	1 cut(s)	318
Hin1I	GRCGYC	2 cut(s)	246, 2310
Hin6I	GCGC	1 cut(s)	316
HinP1I	GCGC	1 cut(s)	316
HincII	GTYRAC	4 cut(s)	121, 253, 648, 2526
HindII	GTYRAC	4 cut(s)	121, 253, 648, 2526
HindIII	AAGCTT	3 cut(s)	699, 890, 1017
HpaII	CCGG	5 cut(s)	162, 256, 1165, 1589, 2313
HphI	GGTGA	6 cut(s)	131, 185, 967, 1447, 1964, 2225
Hpy166II	GTNNAC	9 cut(s)	121, 200, 253, 262, 648, 1418, 1708, 2308, 2526
Hpy188I	TCNGA	6 cut(s)	225, 244, 458, 1431, 2431, 2554
Hpy8I	GTNNAC	9 cut(s)	121, 200, 253, 262, 648, 1418, 1708, 2308, 2526
Hpy99I	CGWCG	4 cut(s)	122, 248, 251, 254
HpyAV	CCTTC	8 cut(s)	103, 220, 556, 823, 1046, 1426, 1732, 2334
HpyCH4III	ACNGT	5 cut(s)	10, 197, 383, 1609, 1646
HpyCH4IV	ACGT	2 cut(s)	246, 2145
HpyF10VI	GCNNNNNNNGC	6 cut(s)	469, 1025, 1740, 1838, 1922, 2384
HpyF3I	CTNAG	2 cut(s)	540, 1504
HpySE526I	ACGT	2 cut(s)	246, 2145
Hsp92I	GRCGYC	2 cut(s)	246, 2310
HspAI	GCGC	1 cut(s)	316
Ksp22I	TGATCA	2 cut(s)	453, 663
KspI	CCGCGG	1 cut(s)	133
Kzo9I	GATC	9 cut(s)	453, 663, 677, 745, 916, 1211, 1313, 1954, 2431
LmnI	GCTCC	5 cut(s)	214, 273, 376, 1360, 2375
Lsp1109I	GCAGC	6 cut(s)	606, 638, 1037, 1447, 1455, 1828
LweI	GCATC	5 cut(s)	526, 990, 1435, 2005, 2213
MaeI	CTAG	1 cut(s)	468
MaeII	ACGT	2 cut(s)	246, 2145
MaeIII	GTNAC	4 cut(s)	751, 967, 1597, 2536
MalI	GATC	9 cut(s)	455, 665, 679, 747, 918, 1213, 1315, 1956, 2433
MboI	GATC	9 cut(s)	453, 663, 677, 745, 916, 1211, 1313, 1954, 2431
MfeI	CAATTG	1 cut(s)	1491
MflI	RGATCY	1 cut(s)	1313
MhlI	GDGCHC	4 cut(s)	381, 430, 793, 2100
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	4 cut(s)	213, 551, 748, 2531
MmeI	TCCRAC	4 cut(s)	267, 718, 2245, 2252
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	1834
MroXI	GAANNNNTTC	2 cut(s)	1242, 2186
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	8 cut(s)	864, 1140, 1149, 1302, 1584, 1941, 2085, 2393
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	3 cut(s)	132, 1028, 1460
MspI	CCGG	5 cut(s)	162, 256, 1165, 1589, 2313
MspR9I	CCNGG	4 cut(s)	162, 257, 1234, 1963
MunI	CAATTG	1 cut(s)	1491
Mva1269I	GAATGC	1 cut(s)	1896
MvaI	CCWGG	2 cut(s)	1234, 1963
MvnI	CGCG	1 cut(s)	132
MwoI	GCNNNNNNNGC	6 cut(s)	469, 1025, 1740, 1838, 1922, 2384
NciI	CCSGG	2 cut(s)	162, 257
NdeII	GATC	9 cut(s)	453, 663, 677, 745, 916, 1211, 1313, 1954, 2431
NlaIV	GGNNCC	2 cut(s)	742, 2377
NmuCI	GTSAC	2 cut(s)	751, 1597
NsiI	ATGCAT	1 cut(s)	1834
NspI	RCATGY	3 cut(s)	619, 1832, 1920
NspV	TTCGAA	2 cut(s)	96, 507
PaeI	GCATGC	1 cut(s)	1832
PagI	TCATGA	1 cut(s)	1986
PceI	AGGCCT	1 cut(s)	1056
PctI	GAATGC	1 cut(s)	1896
PdmI	GAANNNNTTC	2 cut(s)	1242, 2186
PfeI	GAWTC	8 cut(s)	156, 601, 1592, 1760, 2131, 2251, 2406, 2441
PflFI	GACNNNGTC	2 cut(s)	248, 257
PflMI	CCANNNNNTGG	1 cut(s)	1750
PkrI	GCNGC	7 cut(s)	134, 621, 628, 1027, 1462, 1470, 1843
PleI	GAGTC	4 cut(s)	212, 550, 748, 2530
PpsI	GAGTC	4 cut(s)	212, 550, 748, 2530
PshBI	ATTAAT	1 cut(s)	1302
PsiI	TTATAA	1 cut(s)	444
Psp6I	CCWGG	2 cut(s)	1232, 1961
PspFI	CCCAGC	1 cut(s)	15
PspGI	CCWGG	2 cut(s)	1232, 1961
PspN4I	GGNNCC	2 cut(s)	742, 2377
PspPI	GGNCC	4 cut(s)	234, 594, 740, 1741
PstNI	CAGNNNCTG	2 cut(s)	2140, 2552
PsuI	RGATCY	1 cut(s)	1313
PsyI	GACNNNGTC	2 cut(s)	248, 257
PvuII	CAGCTG	2 cut(s)	1028, 1460
RsaI	GTAC	3 cut(s)	433, 1039, 1452
RsaNI	GTAC	3 cut(s)	432, 1038, 1451
SacII	CCGCGG	1 cut(s)	133
SalI	GTCGAC	3 cut(s)	119, 251, 646
SaqAI	TTAA	8 cut(s)	864, 1140, 1149, 1302, 1584, 1941, 2085, 2393
SatI	GCNGC	7 cut(s)	133, 620, 627, 1026, 1461, 1469, 1842
Sau3AI	GATC	9 cut(s)	453, 663, 677, 745, 916, 1211, 1313, 1954, 2431
Sau96I	GGNCC	4 cut(s)	234, 594, 740, 1741
SchI	GAGTC	4 cut(s)	213, 551, 748, 2531
ScrFI	CCNGG	4 cut(s)	162, 257, 1234, 1963
SduI	GDGCHC	4 cut(s)	381, 430, 793, 2100
SfaNI	GCATC	5 cut(s)	526, 990, 1435, 2005, 2213
SfcI	CTRYAG	3 cut(s)	1338, 1729, 2044
Sfr303I	CCGCGG	1 cut(s)	133
SfuI	TTCGAA	2 cut(s)	96, 507
SgrBI	CCGCGG	1 cut(s)	133
SinI	GGWCC	1 cut(s)	740
SphI	GCATGC	1 cut(s)	1832
SseBI	AGGCCT	1 cut(s)	1056
SsiI	CCGC	9 cut(s)	72, 90, 130, 132, 271, 1005, 1425, 1844, 2472
SspI	AATATT	5 cut(s)	763, 797, 868, 1384, 1872
SspMI	CTAG	1 cut(s)	468
StuI	AGGCCT	1 cut(s)	1056
StyD4I	CCNGG	4 cut(s)	160, 255, 1232, 1961
TaaI	ACNGT	5 cut(s)	10, 197, 383, 1609, 1646
TaiI	ACGT	2 cut(s)	249, 2148
TaqII	GACCGA	1 cut(s)	633
TatI	WGTACW	2 cut(s)	1037, 1450
TauI	GCSGC	1 cut(s)	135
TfiI	GAWTC	8 cut(s)	156, 601, 1592, 1760, 2131, 2251, 2406, 2441
Tru1I	TTAA	8 cut(s)	864, 1140, 1149, 1302, 1584, 1941, 2085, 2393
Tru9I	TTAA	8 cut(s)	864, 1140, 1149, 1302, 1584, 1941, 2085, 2393
TscAI	CASTG	6 cut(s)	281, 378, 386, 1612, 1651, 2215
TseFI	GTSAC	2 cut(s)	751, 1597
TseI	GCWGC	6 cut(s)	619, 626, 1025, 1460, 1468, 1841
Tsp45I	GTSAC	2 cut(s)	751, 1597
TspGWI	ACGGA	5 cut(s)	106, 227, 374, 747, 833
TspRI	CASTG	6 cut(s)	281, 378, 386, 1612, 1651, 2215
Tth111I	GACNNNGTC	2 cut(s)	248, 257
Van91I	CCANNNNNTGG	1 cut(s)	1750
VpaK11BI	GGWCC	1 cut(s)	740
VspI	ATTAAT	1 cut(s)	1302
XapI	RAATTY	5 cut(s)	1371, 1525, 1686, 2001, 2316
XceI	RCATGY	3 cut(s)	619, 1832, 1920
XcmI	CCANNNNNNNNNTGG	1 cut(s)	604
XmiI	GTMKAC	5 cut(s)	120, 252, 261, 647, 1707
XmnI	GAANNNNTTC	2 cut(s)	1242, 2186
XspI	CTAG	1 cut(s)	468
ZraI	GACGTC	1 cut(s)	247
Zsp2I	ATGCAT	1 cut(s)	1834

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.