Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G41720 AT2G41720 AT2G41720 |
| fragaria_vesca | FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 FvH4_6g24060 |
| malus_domestica | MD12G1080100.v1.1 |
| prunus_persica | Prupe.7G058400_v2.0.a1 Prupe.7G058400_v2.0.a1 Prupe.7G058400_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0482651 |
| rosa_laevigata | RLG00000001090 RLG00000016982 RLG00000023335 RLG00000028152 RLG00000032501 |
| rosa_multiflora | Rmu_sc0004946.1_g000004 Rmu_sc0006069.1_g000004 Rmu_sc0015893.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00229260 Rroxscaffold_3G00244090 Rroxscaffold_4G00320230 Rroxscaffold_6G00399060 Rroxscaffold_7G00168600 |
| rosa_rugosa | Rorug03G0197600 Rorug03G0197700 |
| rosa_samantha | Rh3AG051200 Rh3AG249000 Rh3BG052500 Rh3BG284300 Rh3CG052100 Rh3CG282200 Rh3DG052800 Rh3DG278200 Rh4BG176200 Rh6AG132300 Rh7AG450400 Rh7BG246700 Rh7BG421800 Rh7BG421900 Rh7CG470100 |
| rosa_wichuraiana | Rw3G022490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 231 |
| AatII | GACGTC | 1 cut(s) | 244 |
| AccII | CGCG | 2 cut(s) | 199, 271 |
| AciI | CCGC | 4 cut(s) | 41, 128, 158, 271 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 1 cut(s) | 57 |
| AcuI | CTGAAG | 1 cut(s) | 147 |
| AcyI | GRCGYC | 1 cut(s) | 241 |
| AflIII | ACRYGT | 1 cut(s) | 197 |
| AgsI | TTSAA | 1 cut(s) | 100 |
| AluBI | AGCT | 2 cut(s) | 95, 263 |
| AluI | AGCT | 2 cut(s) | 95, 263 |
| Alw26I | GTCTC | 2 cut(s) | 167, 239 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 1 cut(s) | 92 |
| ApoI | RAATTY | 1 cut(s) | 57 |
| AsuHPI | GGTGA | 1 cut(s) | 127 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 30 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbvI | GCAGC | 1 cut(s) | 104 |
| BccI | CCATC | 2 cut(s) | 121, 274 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 45, 79 |
| BcoDI | GTCTC | 2 cut(s) | 167, 239 |
| BfaI | CTAG | 2 cut(s) | 11, 227 |
| BisI | GCNGC | 3 cut(s) | 93, 129, 159 |
| BlsI | GCNGC | 3 cut(s) | 94, 130, 160 |
| BsaHI | GRCGYC | 1 cut(s) | 241 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 12, 15, 42, 45, 127, 157 |
| BseGI | GGATG | 1 cut(s) | 176 |
| BseMII | CTCAG | 1 cut(s) | 102 |
| BseRI | GAGGAG | 1 cut(s) | 20 |
| BseXI | GCAGC | 1 cut(s) | 104 |
| Bsh1236I | CGCG | 2 cut(s) | 199, 271 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsmAI | GTCTC | 2 cut(s) | 167, 239 |
| BsmBI | CGTCTC | 1 cut(s) | 239 |
| BsnI | GGCC | 1 cut(s) | 5 |
| BspACI | CCGC | 4 cut(s) | 41, 128, 158, 271 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspCNI | CTCAG | 1 cut(s) | 101 |
| BspFNI | CGCG | 2 cut(s) | 199, 271 |
| BssNI | GRCGYC | 1 cut(s) | 241 |
| BstACI | GRCGYC | 1 cut(s) | 241 |
| BstDEI | CTNAG | 1 cut(s) | 88 |
| BstF5I | GGATG | 1 cut(s) | 176 |
| BstFNI | CGCG | 2 cut(s) | 199, 271 |
| BstMAI | GTCTC | 2 cut(s) | 167, 239 |
| BstUI | CGCG | 2 cut(s) | 199, 271 |
| BstV1I | GCAGC | 1 cut(s) | 104 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtgZI | GCGATG | 2 cut(s) | 99, 252 |
| BtsCI | GGATG | 1 cut(s) | 176 |
| CseI | GACGC | 1 cut(s) | 188 |
| CviJI | RGCY | 6 cut(s) | 5, 73, 95, 112, 161, 263 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 73, 95, 112, 161, 263 |
| DdeI | CTNAG | 1 cut(s) | 88 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 231 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 231 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eco57I | CTGAAG | 1 cut(s) | 147 |
| EcoRI | GAATTC | 1 cut(s) | 57 |
| Esp3I | CGTCTC | 1 cut(s) | 239 |
| FaiI | YATR | 1 cut(s) | 152 |
| Fnu4HI | GCNGC | 3 cut(s) | 93, 129, 159 |
| FokI | GGATG | 1 cut(s) | 163 |
| Fsp4HI | GCNGC | 3 cut(s) | 93, 129, 159 |
| FspBI | CTAG | 2 cut(s) | 11, 227 |
| GluI | GCNGC | 3 cut(s) | 93, 129, 159 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HgaI | GACGC | 1 cut(s) | 188 |
| Hin1I | GRCGYC | 1 cut(s) | 241 |
| HinfI | GANTC | 1 cut(s) | 86 |
| HphI | GGTGA | 1 cut(s) | 127 |
| Hpy188I | TCNGA | 1 cut(s) | 239 |
| Hpy188III | TCNNGA | 2 cut(s) | 165, 218 |
| Hpy99I | CGWCG | 3 cut(s) | 204, 243, 246 |
| HpyAV | CCTTC | 2 cut(s) | 47, 215 |
| HpyCH4IV | ACGT | 1 cut(s) | 241 |
| HpyCH4V | TGCA | 1 cut(s) | 66 |
| HpyF3I | CTNAG | 1 cut(s) | 88 |
| HpySE526I | ACGT | 1 cut(s) | 241 |
| Hsp92I | GRCGYC | 1 cut(s) | 241 |
| LmnI | GCTCC | 1 cut(s) | 268 |
| LpnPI | CCDG | 3 cut(s) | 150, 231, 237 |
| Lsp1109I | GCAGC | 1 cut(s) | 104 |
| MaeI | CTAG | 2 cut(s) | 11, 227 |
| MaeII | ACGT | 1 cut(s) | 241 |
| MboII | GAAGA | 1 cut(s) | 118 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 1 cut(s) | 57 |
| MluI | ACGCGT | 1 cut(s) | 197 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 80 |
| MmeI | TCCRAC | 1 cut(s) | 262 |
| MnlI | CCTC | 3 cut(s) | 38, 41, 151 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MslI | CAYNNNNRTG | 1 cut(s) | 271 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 2 cut(s) | 128, 158 |
| MvnI | CGCG | 2 cut(s) | 199, 271 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 238 |
| PflFI | GACNNNGTC | 2 cut(s) | 228, 243 |
| PkrI | GCNGC | 3 cut(s) | 94, 130, 160 |
| PleI | GAGTC | 1 cut(s) | 80 |
| PpsI | GAGTC | 1 cut(s) | 80 |
| PsyI | GACNNNGTC | 2 cut(s) | 228, 243 |
| RseI | CAYNNNNRTG | 1 cut(s) | 271 |
| SatI | GCNGC | 3 cut(s) | 93, 129, 159 |
| SchI | GAGTC | 1 cut(s) | 80 |
| SetI | ASST | 7 cut(s) | 39, 97, 143, 232, 244, 256, 265 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 271 |
| Sse9I | AATT | 1 cut(s) | 57 |
| SsiI | CCGC | 4 cut(s) | 41, 128, 158, 271 |
| SspMI | CTAG | 2 cut(s) | 11, 227 |
| TaiI | ACGT | 1 cut(s) | 244 |
| TaqI | TCGA | 1 cut(s) | 202 |
| TasI | AATT | 1 cut(s) | 57 |
| TauI | GCSGC | 2 cut(s) | 131, 161 |
| TseI | GCWGC | 1 cut(s) | 92 |
| Tth111I | GACNNNGTC | 2 cut(s) | 228, 243 |
| XapI | RAATTY | 1 cut(s) | 57 |
| XspI | CTAG | 2 cut(s) | 11, 227 |
| ZraI | GACGTC | 1 cut(s) | 242 |