Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0002425

Physical Location & Seq

Genomic Coordinates Reverse (-)

19849372 .. 19853885

Gene Structure 4514 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g26160.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3210 bp

ATGGCTGCTGAGTTCACTACGAAGGTTCGACTAGTTAGATGTCCTAAATGCCGGCTGCTTCTACCGGAGTTGCCAGATTTTCAGGTCTACAAGTGTGGTGGATGTGGTGCTATTCTCCAAGCGAAAAATCGTCTAAATGGTCTGAGAAGCAGGAGTACTGGCTTAAATGGAACAGTGGCAGCTCGGATGAATGGATTGGGTGATTTAGGTCACAGTTCTGAAGATAAGGCATCCAACAGCACAAGTTGTAATGGAACTCTTCCTGACTCGGGAGAATGCTCCTCAGACCAAATCGATGAGAAGAATCAAAGCAAGTCTTCTGGAGAATGCTCCTTTGAAAGAAACACCGAGAGGGATGGGAGCAAGTTTTCAGAAGGCAGTGAATCTAGCAGCTCAAGTCTAAAGGCTAAGGCTCCTGCCTCGGAAGTATGCTCTCCGGAAAGAAGGAATGAAAGGAATGTGAGTAAGTCTTCTGAAGGCAATGAATCTAGCAGCTCTGGTCTAAAGGCTTCAGTTCCTGCATCGGGAGAATGCTCTTTGGAAAGAAGGCATGAGAGGGATGGGAGTAATTCTTCAGATGGTATTGAATCTAGCAGCTCAAGTCCAAAGGCCAAGGCTCCTGACTCAGGTGAATATTCTTTGGAACGAAGCCATGAGAGGGATGAAAGTAAGTCTTCAATAATAATTGAATCTATCAGCTCATGTCCAAAGGCTATAACTCCTGACTTAGGAGAAAGCTCTTTGGAACAAGACATTGAGAGGGTTGATAGTAAGTCTTCTGAAGGCATTGAATCTTGCAGCTCAAGTCCAAAGGTTACTTTTCCTGACTCGGGAGAATGCTTTCTGGATCAAAACAATGAGAAGAATCAGAATAAGTTTTCTGAAGATGAAGAATTTAGCAGCTCAAGTCACAAGGTCATTCTCCCAGAATCAGGTGAAGACACTTCAATTCAAAACAACGGGATGGATCCTGATAAATTATCTGTAGAAGATTATGGTGGTGAGCAGCTTCGAGTGTTAAACTTGCCAAATGAGAACCAAAACAACCACATTGATCAAAATGGTTATGGTGACCCTAGTATGGAGCCACTTGGAGTTTCCAGAGGAATTCCTTCATTAATGGAGTTTGCAAGTAGTCAAAGCAAGGGGTCATTACCAATATCAGCAGCAAGTTCAGAAGCATTGAAAGATGATGAGAGTTTACCTCTAGCACCAAATCTAGAGGTAGACATCGTGGTGGAGATTGATTCTGATTCCACGAGTTCAAGCAGACTCAATGCAGTGGCCACAAGGGGAAGTAGTTCAATATATTCTGCTCATATGCCCCCAAGGGACAGCATTTCATCAGATCCCATTATATCTTCTCCTGATGAACAATCAAATGAAATAGTAGACTTCAACATGGATGTTGATTCAAGTGCTGTCAATCCAGGAGCTACAAGTGAAAGTGGTGTTACTGCTCACATGCCAGCACAAGAGAGCAGTTCTTCAGGTACCCTTACTTCGTCTCCTAATGAACAGCTTAGGGAACCGCATAATGATGTTCCGAAAAGTTTTGATCATCTGAAGTCTTCAAGCACATTTGAAATTGAAACTACAGACTTTCTCAGCCCCAGATCTGAGTTTAGCACTGCAGTAAGAGATAGGTCGAAGTCCCCAGCAACTAGAAGCCATCATGCTTATGATGGAAGTGTCTCTTCTTATGATGGTATAGATGATCTGTTATACACCCATAATATGAATACATTTCAAGATGCTTATAAAGCTCCGAACTTGGTTCAATATGAAGAAAGATACAGAAGGAAAAAGTTTCTTGCAGAAGGCATGGGGAGTAGAGGTTCTGAATTTCCAAATCAGGCTAGGAATACCTGGTTAAGCATGCCTGATAAGAATCGTCATGCCATGAAATACAGAAACCGGGATCAAGATGAAATGCTGCCACCTAGAATACCACGTCATCCAAGTCGAGATCATGCAAGAGTGCAGAGGGATGAATATATGTCTAGGATGGCTTCTCTTCAAGGAGATTCCCTAGGTGGATATGGAAATGGTCGCTTCGCAAATCAAATGCACAATGAGTTGCAAAGTAATTCTGACTATCAATCTGACAGGTCTGTGAGTGCTGCAGCGGACAAGTTGACACTTCTGAGAATGGTGTATGAATTGCAGAACCAAGTTAACAATTTAAATATTGTACAGGCAAGTCGGCAGGAAAAGCATATTCCCCAGTACCATAATTATGAGGCATCTGAGGAGGAGCTTTTCCATGGCCTAAATCATCCTAGGGATCTAAGAAGAAGCAGAGCGGGAAGCCATTATACACAGCAGCAAAGTCAGTACAGACCAATACCTTTCTCTAGTGAGGCAACAACAAGCAGACACCAAGTTGATCCCTCCTTTATGCACCAGTATCCTCAAGACAGGCAGTTCTCAGCACCGTTGCCTCTACCCATCCGGAGCAATACTAATGGGTTACGTAGGCTTCATCCTGGTTATCCCTCAAGCCAGTGGGACAGTGAAACAATGTCTGATGATCAGAGACACAACAGTCCTGAGGTAAAGAAGTATTATGGAGAGAAACAACAGATGCCTAAGCGTCATTTCCGGCCAATAGCAGGTGGAGCTCCTATCCTGATATGTTACAACTGCTTTAAACCACTTCAGATACCTGCAGATTTTCTGCTTTTCAAAAGGAAATGTCATAGACTTCAATGTGGTGCTTGCTCAAAGGTGCTTAAGTTTTCACTCCATAAGAGAACTCACATTCTCCCTTATGAAGTGGATGCTATAGGGCCTCCACCAAGTGAGGTTGAGGAGCACAGTTATGGTGTAAATGCGGATCCTGTGTCGTGTTCTGATGATTATGGCTATGGACTCTCATACTGCAAAAGTGGCTCTACAGAGGCAGGAGATGCTGGAAATATAGCACCCTCAAACTCTCTTGAAAGTACTACAGTGCATGAGAGAAACATGTCATATGGATCAAACAATCCAACAAGAGGGAGACAAGAGATTGTTCTGAGACGTTCTCAATCTCAAAACAAAGATAGGAATCCAGTTGAAAGATTTATGTCAGCAAGAACATCGTCCCAGCTGCCACCAAAGTCAAGCTCACCACTTCATCGACTCATGGGTTACAGATCGCCAAGTCAAGTGATTAGAGGGATTGGTTTATCTCGTTCAGGGTCAAAAAACTCAGGAAGGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zinc_ribbon_12

Protein Analysis

1070

Amino Acids

117.98

Weight (kDa)

5.86

Isoelectric Point (pI)

70.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EDR4-like_1st	PF22910	8 - 41	3.6e-19	Enhanced disease resistance 4-like, N-terminal domain
Zn_ribbon_12	PF11331	872 - 916	2.1e-18	EDR4 zinc-ribbon domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002425)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05190
fragaria_vesca	FvH4_7g26160
malus_domestica	MD01G1169800.v1.1 MD01G1169900.v1.1 MD07G1235500.v1.1
prunus_persica	Prupe.2G265800_v2.0.a1 Prupe.2G265800_v2.0.a1 Prupe.2G265800_v2.0.a1 Prupe.4G213000_v2.0.a1 Prupe.4G213000_v2.0.a1 Prupe.4G213000_v2.0.a1 Prupe.4G213000_v2.0.a1 Prupe.4G213000_v2.0.a1
pyrus_communis	pycom01g18250 pycom01g18260 pycom07g21310
rosa_chinensis	RchiOBHm_Chr1g0372591 RchiOBHm_Chr4g0399021 RchiOBHm_Chr5g0049731 RchiOBHm_Chr7g0243711
rosa_laevigata	RLG00000001030 RLG00000008808 RLG00000010509 RLG00000026888
rosa_multiflora	Rmu_ssc0000419.1_g000010
rosa_roxburghii	Rroxscaffold_7G00208520
rosa_rugosa	Rorug01G0066000 Rorug01G0373300
rosa_samantha	Rh1AG381600 Rh1BG345000 Rh1CG358400 Rh1DG376200 Rh2BG091800 Rh3DG186100 Rh4DG129900 Rh5AG465400 Rh7AG476000
rosa_wichuraiana	Rw0G018150 Rw1G033560 Rw2G022780 Rw7G041610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1761
AarI	CACCTGC	1 cut(s)	2606
AasI	GACNNNNNNGTC	1 cut(s)	2547
Acc36I	ACCTGC	2 cut(s)	2606, 2677
Acc65I	GGTACC	1 cut(s)	1493
AccB1I	GGYRCC	1 cut(s)	1493
AccBSI	CCGCTC	1 cut(s)	2306
AccI	GTMKAC	3 cut(s)	87, 1227, 1392
AccIII	TCCGGA	2 cut(s)	436, 2454
AciI	CCGC	4 cut(s)	1532, 2129, 2306, 2837
AcoI	YGGCCR	2 cut(s)	1284, 2606
AcsI	RAATTY	3 cut(s)	893, 1107, 1844
AcuI	CTGAAG	9 cut(s)	240, 495, 495, 558, 801, 903, 1473, 1586, 2645
AdeI	CACNNNGTG	1 cut(s)	2804
AfaI	GTAC	6 cut(s)	157, 1495, 2196, 2231, 2339, 2950
AflII	CTTAAG	1 cut(s)	2735
AflIII	ACRYGT	1 cut(s)	2970
AhlI	ACTAGT	1 cut(s)	31
AjiI	CACGTC	1 cut(s)	1955
AjnI	CCWGG	3 cut(s)	1429, 1868, 2488
AloI	GAACNNNNNNTCC	2 cut(s)	1822, 1854
Alw21I	GWGCWC	2 cut(s)	2626, 2820
Alw26I	GTCTC	5 cut(s)	1512, 1699, 2533, 2998, 3016
AlwNI	CAGNNNCTG	1 cut(s)	518
Ama87I	CYCGRG	2 cut(s)	268, 829
Aor13HI	TCCGGA	2 cut(s)	436, 2454
AoxI	GGCC	5 cut(s)	609, 1284, 2269, 2606, 2792
ApoI	RAATTY	3 cut(s)	893, 1107, 1844
AseI	ATTAAT	1 cut(s)	1118
Asp700I	GAANNNNTTC	3 cut(s)	840, 1111, 1300
Asp718I	GGTACC	1 cut(s)	1493
AspA2I	CCTAGG	2 cut(s)	2032, 2282
AspS9I	GGNCC	1 cut(s)	2792
AsuC2I	CCSGG	1 cut(s)	1919
AsuHPI	GGTGA	6 cut(s)	212, 641, 947, 1013, 1082, 3105
AvaI	CYCGRG	2 cut(s)	268, 829
AvrII	CCTAGG	2 cut(s)	2032, 2282
AxyI	CCTNAGG	1 cut(s)	2553
BalI	TGGCCA	1 cut(s)	1286
BamHI	GGATCC	2 cut(s)	967, 2839
BanI	GGYRCC	1 cut(s)	1493
BanII	GRGCYC	1 cut(s)	2626
BarI	GAAGNNNNNNTAC	6 cut(s)	139, 171, 1486, 1518, 2302, 2334
BauI	CACGAG	1 cut(s)	1258
BbsI	GAAGAC	6 cut(s)	309, 462, 666, 768, 945, 1563
Bbv12I	GWGCWC	2 cut(s)	2626, 2820
BccI	CCATC	9 cut(s)	350, 554, 572, 958, 1679, 1680, 1700, 2002, 2459
BcgI	CGANNNNNNTGC	2 cut(s)	3066, 3100
BciT130I	CCWGG	3 cut(s)	1431, 1870, 2490
BciVI	GTATCC	1 cut(s)	2421
BclI	TGATCA	3 cut(s)	1054, 1558, 2533
BcnI	CCSGG	1 cut(s)	1919
BcoDI	GTCTC	5 cut(s)	1512, 1699, 2533, 2998, 3016
BcuI	ACTAGT	1 cut(s)	31
BfmI	CTRYAG	8 cut(s)	984, 1596, 1632, 2124, 2670, 2787, 2898, 2952
BfrI	CTTAAG	1 cut(s)	2735
BfuAI	ACCTGC	2 cut(s)	2606, 2677
BfuI	GTATCC	1 cut(s)	2421
BglII	AGATCT	1 cut(s)	1616
BlnI	CCTAGG	2 cut(s)	2032, 2282
BmcAI	AGTACT	2 cut(s)	157, 2950
Bme1390I	CCNGG	4 cut(s)	1431, 1870, 1919, 2490
BmeT110I	CYCGRG	2 cut(s)	268, 829
BmgBI	CACGTC	1 cut(s)	1955
BmgT120I	GGNCC	1 cut(s)	2792
BmiI	GGNNCC	7 cut(s)	414, 618, 969, 1086, 1495, 1530, 2841
BmrFI	CCNGG	4 cut(s)	1431, 1870, 1919, 2490
BmrI	ACTGGG	1 cut(s)	2221
BmsI	GCATC	7 cut(s)	239, 530, 1744, 2255, 2577, 2773, 2902
BmuI	ACTGGG	1 cut(s)	2221
BpiI	GAAGAC	6 cut(s)	309, 462, 666, 768, 945, 1563
BplI	GAGNNNNNCTC	4 cut(s)	1189, 1221, 3013, 3045
BpmI	CTGGAG	1 cut(s)	342
Bpu10I	CCTNAGC	3 cut(s)	408, 1523, 2592
BpuEI	CTTGAG	6 cut(s)	379, 583, 787, 889, 2400, 2485
BpuMI	CCSGG	1 cut(s)	1919
Bsa29I	ATCGAT	1 cut(s)	294
BsaAI	YACGTR	1 cut(s)	2477
BsaBI	GATNNNNATC	2 cut(s)	1890, 3051
BsaJI	CCNNGG	6 cut(s)	420, 612, 1328, 2032, 2266, 2282
BsaWI	WCCGGW	3 cut(s)	64, 436, 2454
BsaXI	ACNNNNNCTCC	4 cut(s)	1492, 1522, 1822, 1852
Bse118I	RCCGGY	1 cut(s)	51
Bse1I	ACTGG	5 cut(s)	163, 2227, 2407, 2506, 3056
Bse21I	CCTNAGG	1 cut(s)	2553
Bse3DI	GCAATG	1 cut(s)	487
Bse8I	GATNNNNATC	2 cut(s)	1890, 3051
BseAI	TCCGGA	2 cut(s)	436, 2454
BseBI	CCWGG	3 cut(s)	1431, 1870, 2490
BseCI	ATCGAT	1 cut(s)	294
BseDI	CCNNGG	6 cut(s)	420, 612, 1328, 2032, 2266, 2282
BseJI	GATNNNNATC	2 cut(s)	1890, 3051
BseMI	GCAATG	1 cut(s)	487
BseNI	ACTGG	5 cut(s)	163, 2227, 2407, 2506, 3056
BseRI	GAGGAG	4 cut(s)	271, 2267, 2270, 2828
BseYI	CCCAGC	2 cut(s)	1657, 3090
BsgI	GTGCAG	1 cut(s)	2003
BshFI	GGCC	5 cut(s)	611, 1286, 2271, 2608, 2794
BshNI	GGYRCC	1 cut(s)	1493
BshVI	ATCGAT	1 cut(s)	294
BsiHKAI	GWGCWC	2 cut(s)	2626, 2820
BsiHKCI	CYCGRG	2 cut(s)	268, 829
BsiSI	CCGG	6 cut(s)	52, 65, 437, 1918, 2455, 2605
BslFI	GGGAC	4 cut(s)	1346, 1639, 2525, 3073
BsmAI	GTCTC	5 cut(s)	1512, 1699, 2533, 2998, 3016
BsmBI	CGTCTC	2 cut(s)	1512, 3016
BsmFI	GGGAC	4 cut(s)	1346, 1639, 2525, 3073
BsmI	GAATGC	4 cut(s)	281, 332, 536, 842
BsnI	GGCC	5 cut(s)	611, 1286, 2271, 2608, 2794
BsoBI	CYCGRG	2 cut(s)	268, 829
Bsp1286I	GDGCHC	2 cut(s)	2626, 2820
Bsp13I	TCCGGA	2 cut(s)	436, 2454
Bsp1407I	TGTACA	1 cut(s)	2194
Bsp19I	CCATGG	1 cut(s)	2266
BspACI	CCGC	4 cut(s)	1532, 2129, 2306, 2837
BspANI	GGCC	5 cut(s)	611, 1286, 2271, 2608, 2794
BspDI	ATCGAT	1 cut(s)	294
BspEI	TCCGGA	2 cut(s)	436, 2454
BspLI	GGNNCC	7 cut(s)	414, 618, 969, 1086, 1495, 1530, 2841
BspMAI	CTGCAG	3 cut(s)	1636, 2128, 2674
BspMI	ACCTGC	2 cut(s)	2606, 2677
BspT107I	GGYRCC	1 cut(s)	1493
BspTI	CTTAAG	1 cut(s)	2735
BsrBI	CCGCTC	1 cut(s)	2306
BsrDI	GCAATG	1 cut(s)	487
BsrFI	RCCGGY	1 cut(s)	51
BsrGI	TGTACA	1 cut(s)	2194
BsrI	ACTGG	5 cut(s)	163, 2227, 2407, 2506, 3056
BssAI	RCCGGY	1 cut(s)	51
BssECI	CCNNGG	6 cut(s)	420, 612, 1328, 2032, 2266, 2282
BssSI	CACGAG	1 cut(s)	1258
BssT1I	CCWWGG	5 cut(s)	612, 1328, 2032, 2266, 2282
Bst2BI	CACGAG	1 cut(s)	1258
Bst2UI	CCWGG	3 cut(s)	1431, 1870, 2490
Bst4CI	ACNGT	7 cut(s)	175, 215, 2439, 2516, 2549, 2822, 2956
Bst6I	CTCTTC	3 cut(s)	264, 1702, 2022
BstAFI	CTTAAG	1 cut(s)	2735
BstAPI	GCANNNNNTGC	1 cut(s)	2912
BstAUI	TGTACA	1 cut(s)	2194
BstBAI	YACGTR	1 cut(s)	2477
BstC8I	GCNNGC	4 cut(s)	53, 1470, 1880, 2722
BstDSI	CCRYGG	1 cut(s)	2266
BstEII	GGTNACC	1 cut(s)	1070
BstENI	CCTNNNNNAGG	2 cut(s)	624, 726
BstMAI	GTCTC	5 cut(s)	1512, 1699, 2533, 2998, 3016
BstMWI	GCNNNNNNNGC	5 cut(s)	1763, 2215, 2621, 2892, 2912
BstNI	CCWGG	3 cut(s)	1431, 1870, 2490
BstNSI	RCATGY	3 cut(s)	1468, 1882, 2974
BstPI	GGTNACC	1 cut(s)	1070
BstSCI	CCNGG	4 cut(s)	1429, 1868, 1917, 2488
BstSFI	CTRYAG	8 cut(s)	984, 1596, 1632, 2124, 2670, 2787, 2898, 2952
BstSNI	TACGTA	1 cut(s)	2477
BstV2I	GAAGAC	6 cut(s)	309, 462, 666, 768, 945, 1563
BstX2I	RGATCY	5 cut(s)	967, 1348, 1616, 2287, 2839
BstYI	RGATCY	5 cut(s)	967, 1348, 1616, 2287, 2839
Bsu15I	ATCGAT	1 cut(s)	294
Bsu36I	CCTNAGG	1 cut(s)	2553
BsuI	GTATCC	1 cut(s)	2421
BsuRI	GGCC	5 cut(s)	611, 1286, 2271, 2608, 2794
BsuTUI	ATCGAT	1 cut(s)	294
BtgI	CCRYGG	1 cut(s)	2266
BtrI	CACGTC	1 cut(s)	1955
BtsI	GCAGTG	3 cut(s)	385, 1287, 1629
BtsIMutI	CAGTG	7 cut(s)	180, 385, 1287, 1629, 2513, 2521, 2961
BveI	ACCTGC	2 cut(s)	2606, 2677
Cac8I	GCNNGC	4 cut(s)	53, 1470, 1880, 2722
CaiI	CAGNNNCTG	1 cut(s)	518
Cfr10I	RCCGGY	1 cut(s)	51
Cfr13I	GGNCC	1 cut(s)	2792
ClaI	ATCGAT	1 cut(s)	294
CseI	GACGC	1 cut(s)	2585
CsiI	ACCWGGT	1 cut(s)	1868
Csp6I	GTAC	6 cut(s)	156, 1494, 2195, 2230, 2338, 2949
CspCI	CAANNNNNGTGG	2 cut(s)	79, 114
CviQI	GTAC	6 cut(s)	156, 1494, 2195, 2230, 2338, 2949
DraI	TTTAAA	2 cut(s)	2187, 2653
DraIII	CACNNNGTG	1 cut(s)	2804
DrdI	GACNNNNNNGTC	1 cut(s)	2547
DseDI	GACNNNNNNGTC	1 cut(s)	2547
EaeI	YGGCCR	2 cut(s)	1284, 2606
Eam1104I	CTCTTC	3 cut(s)	264, 1702, 2022
EarI	CTCTTC	3 cut(s)	264, 1702, 2022
Ecl136II	GAGCTC	1 cut(s)	2624
Eco105I	TACGTA	1 cut(s)	2477
Eco130I	CCWWGG	5 cut(s)	612, 1328, 2032, 2266, 2282
Eco24I	GRGCYC	1 cut(s)	2626
Eco53kI	GAGCTC	1 cut(s)	2624
Eco57I	CTGAAG	9 cut(s)	240, 495, 495, 558, 801, 903, 1473, 1586, 2645
Eco81I	CCTNAGG	1 cut(s)	2553
Eco88I	CYCGRG	2 cut(s)	268, 829
Eco91I	GGTNACC	1 cut(s)	1070
EcoICRI	GAGCTC	1 cut(s)	2624
EcoNI	CCTNNNNNAGG	2 cut(s)	624, 726
EcoO109I	RGGNCCY	1 cut(s)	2792
EcoO65I	GGTNACC	1 cut(s)	1070
EcoRI	GAATTC	1 cut(s)	1107
EcoRII	CCWGG	3 cut(s)	1429, 1868, 2488
EcoT14I	CCWWGG	5 cut(s)	612, 1328, 2032, 2266, 2282
EcoT38I	GRGCYC	1 cut(s)	2626
ErhI	CCWWGG	5 cut(s)	612, 1328, 2032, 2266, 2282
Esp3I	CGTCTC	2 cut(s)	1512, 3016
FalI	AAGNNNNNCTT	6 cut(s)	301, 333, 658, 690, 1681, 1713
FaqI	GGGAC	4 cut(s)	1346, 1639, 2525, 3073
FauI	CCCGC	1 cut(s)	2299
FauNDI	CATATG	2 cut(s)	1320, 2977
FbaI	TGATCA	3 cut(s)	1054, 1558, 2533
FblI	GTMKAC	3 cut(s)	87, 1227, 1392
FriOI	GRGCYC	1 cut(s)	2626
GsaI	CCCAGC	2 cut(s)	1661, 3094
GsuI	CTGGAG	1 cut(s)	342
HaeIII	GGCC	5 cut(s)	611, 1286, 2271, 2608, 2794
HapII	CCGG	6 cut(s)	52, 65, 437, 1918, 2455, 2605
HgaI	GACGC	1 cut(s)	2585
HincII	GTYRAC	2 cut(s)	2139, 2179
HindII	GTYRAC	2 cut(s)	2139, 2179
HpaI	GTTAAC	1 cut(s)	2179
HpaII	CCGG	6 cut(s)	52, 65, 437, 1918, 2455, 2605
HphI	GGTGA	6 cut(s)	212, 641, 947, 1013, 1082, 3105
Hpy166II	GTNNAC	7 cut(s)	15, 88, 1202, 1228, 1393, 2139, 2179
Hpy8I	GTNNAC	7 cut(s)	15, 88, 1202, 1228, 1393, 2139, 2179
HpyCH4III	ACNGT	7 cut(s)	175, 215, 2439, 2516, 2549, 2822, 2956
HpyCH4IV	ACGT	3 cut(s)	1954, 2476, 3025
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1763, 2215, 2621, 2892, 2912
HpySE526I	ACGT	3 cut(s)	1954, 2476, 3025
Kpn2I	TCCGGA	2 cut(s)	436, 2454
KpnI	GGTACC	1 cut(s)	1497
KroI	GCCGGC	1 cut(s)	51
KroNI	GCCGGC	1 cut(s)	53
Ksp22I	TGATCA	3 cut(s)	1054, 1558, 2533
KspAI	GTTAAC	1 cut(s)	2179
LweI	GCATC	7 cut(s)	239, 530, 1744, 2255, 2577, 2773, 2902
MabI	ACCWGGT	1 cut(s)	1868
MaeII	ACGT	3 cut(s)	1954, 2476, 3025
MaeIII	GTNAC	8 cut(s)	209, 814, 908, 1070, 1453, 2472, 2639, 3134
MbiI	CCGCTC	1 cut(s)	2306
MflI	RGATCY	5 cut(s)	967, 1348, 1616, 2287, 2839
MhlI	GDGCHC	2 cut(s)	2626, 2820
MlsI	TGGCCA	1 cut(s)	1286
MluNI	TGGCCA	1 cut(s)	1286
MlyI	GAGTC	6 cut(s)	260, 617, 821, 1266, 2868, 3120
MmeI	TCCRAC	2 cut(s)	258, 3017
Mox20I	TGGCCA	1 cut(s)	1286
MroI	TCCGGA	2 cut(s)	436, 2454
MroNI	GCCGGC	1 cut(s)	51
MroXI	GAANNNNTTC	3 cut(s)	840, 1111, 1300
MscI	TGGCCA	1 cut(s)	1286
MseI	TTAA	8 cut(s)	164, 1019, 1118, 1874, 2178, 2186, 2652, 2736
MslI	CAYNNNNRTG	5 cut(s)	1235, 1539, 1680, 2238, 2823
Msp20I	TGGCCA	1 cut(s)	1286
MspA1I	CMGCKG	2 cut(s)	2129, 3094
MspCI	CTTAAG	1 cut(s)	2735
MspI	CCGG	6 cut(s)	52, 65, 437, 1918, 2455, 2605
MspR9I	CCNGG	4 cut(s)	1431, 1870, 1919, 2490
Mva1269I	GAATGC	4 cut(s)	281, 332, 536, 842
MvaI	CCWGG	3 cut(s)	1431, 1870, 2490
MwoI	GCNNNNNNNGC	5 cut(s)	1763, 2215, 2621, 2892, 2912
NaeI	GCCGGC	1 cut(s)	53
NciI	CCSGG	1 cut(s)	1919
NcoI	CCATGG	1 cut(s)	2266
NdeI	CATATG	2 cut(s)	1320, 2977
NgoMIV	GCCGGC	1 cut(s)	51
NlaIV	GGNNCC	7 cut(s)	414, 618, 969, 1086, 1495, 1530, 2841
NmuCI	GTSAC	3 cut(s)	209, 908, 1070
NspI	RCATGY	3 cut(s)	1468, 1882, 2974
PaeI	GCATGC	1 cut(s)	1882
PaqCI	CACCTGC	1 cut(s)	2606
PciI	ACATGT	1 cut(s)	2970
PctI	GAATGC	4 cut(s)	281, 332, 536, 842
PdiI	GCCGGC	1 cut(s)	53
PdmI	GAANNNNTTC	3 cut(s)	840, 1111, 1300
PfoI	TCCNGGA	1 cut(s)	1429
PleI	GAGTC	6 cut(s)	260, 617, 821, 1266, 2868, 3120
PpsI	GAGTC	6 cut(s)	260, 617, 821, 1266, 2868, 3120
Ppu21I	YACGTR	1 cut(s)	2477
PscI	ACATGT	1 cut(s)	2970
PshBI	ATTAAT	1 cut(s)	1118
PsiI	TTATAA	1 cut(s)	1761
Psp124BI	GAGCTC	1 cut(s)	2626
Psp6I	CCWGG	3 cut(s)	1429, 1868, 2488
PspEI	GGTNACC	1 cut(s)	1070
PspFI	CCCAGC	2 cut(s)	1657, 3090
PspGI	CCWGG	3 cut(s)	1429, 1868, 2488
PspN4I	GGNNCC	7 cut(s)	414, 618, 969, 1086, 1495, 1530, 2841
PspPI	GGNCC	1 cut(s)	2792
PstI	CTGCAG	3 cut(s)	1636, 2128, 2674
PstNI	CAGNNNCTG	1 cut(s)	518
PsuI	RGATCY	5 cut(s)	967, 1348, 1616, 2287, 2839
PvuII	CAGCTG	1 cut(s)	3094
RsaI	GTAC	6 cut(s)	157, 1495, 2196, 2231, 2339, 2950
RsaNI	GTAC	6 cut(s)	156, 1494, 2195, 2230, 2338, 2949
RseI	CAYNNNNRTG	5 cut(s)	1235, 1539, 1680, 2238, 2823
SacI	GAGCTC	1 cut(s)	2626
SaqAI	TTAA	8 cut(s)	164, 1019, 1118, 1874, 2178, 2186, 2652, 2736
Sau96I	GGNCC	1 cut(s)	2792
ScaI	AGTACT	2 cut(s)	157, 2950
SchI	GAGTC	6 cut(s)	260, 617, 821, 1266, 2868, 3120
ScrFI	CCNGG	4 cut(s)	1431, 1870, 1919, 2490
SduI	GDGCHC	2 cut(s)	2626, 2820
SexAI	ACCWGGT	1 cut(s)	1868
SfaNI	GCATC	7 cut(s)	239, 530, 1744, 2255, 2577, 2773, 2902
SfcI	CTRYAG	8 cut(s)	984, 1596, 1632, 2124, 2670, 2787, 2898, 2952
SmiI	ATTTAAAT	1 cut(s)	2187
SmiMI	CAYNNNNRTG	5 cut(s)	1235, 1539, 1680, 2238, 2823
SmlI	CTYRAG	7 cut(s)	394, 598, 802, 904, 2415, 2500, 2735
SmoI	CTYRAG	7 cut(s)	394, 598, 802, 904, 2415, 2500, 2735
SnaBI	TACGTA	1 cut(s)	2477
SpeI	ACTAGT	1 cut(s)	31
SphI	GCATGC	1 cut(s)	1882
SsiI	CCGC	4 cut(s)	1532, 2129, 2306, 2837
SspI	AATATT	2 cut(s)	635, 2191
SstI	GAGCTC	1 cut(s)	2626
StyD4I	CCNGG	4 cut(s)	1429, 1868, 1917, 2488
StyI	CCWWGG	5 cut(s)	612, 1328, 2032, 2266, 2282
SwaI	ATTTAAAT	1 cut(s)	2187
TaaI	ACNGT	7 cut(s)	175, 215, 2439, 2516, 2549, 2822, 2956
TaiI	ACGT	3 cut(s)	1957, 2479, 3028
TaqI	TCGA	6 cut(s)	28, 294, 1012, 1649, 1966, 3124
TatI	WGTACW	4 cut(s)	155, 2194, 2337, 2948
Tru1I	TTAA	8 cut(s)	164, 1019, 1118, 1874, 2178, 2186, 2652, 2736
Tru9I	TTAA	8 cut(s)	164, 1019, 1118, 1874, 2178, 2186, 2652, 2736
TscAI	CASTG	7 cut(s)	180, 385, 1287, 1636, 2513, 2521, 2961
TseFI	GTSAC	3 cut(s)	209, 908, 1070
Tsp45I	GTSAC	3 cut(s)	209, 908, 1070
TspRI	CASTG	7 cut(s)	180, 385, 1287, 1636, 2513, 2521, 2961
Vha464I	CTTAAG	1 cut(s)	2735
VspI	ATTAAT	1 cut(s)	1118
XagI	CCTNNNNNAGG	2 cut(s)	624, 726
XapI	RAATTY	3 cut(s)	893, 1107, 1844
XbaI	TCTAGA	1 cut(s)	1219
XceI	RCATGY	3 cut(s)	1468, 1882, 2974
XmaJI	CCTAGG	2 cut(s)	2032, 2282
XmiI	GTMKAC	3 cut(s)	87, 1227, 1392
XmnI	GAANNNNTTC	3 cut(s)	840, 1111, 1300
ZrmI	AGTACT	2 cut(s)	157, 2950

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.