RLG00000026888

Probable zinc-ribbon domain

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
6785264 .. 6789363
4100 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026888

Sequence Viewer

Length: 3444 bp
ATGGTTGACCTCGAAGCTTCTTCACCGCGACAAAAAGACCATTTCCAATTCCCCCTAACTCCTAAGCCTCAACTAAGAATCACTATTTCATCTTCAAACTTCTCAGCATTCTTGGAATTCAGATGGTGCATTAAGTTTGAGAGTTTCAAGTTTGTTTTTTTTCGTGGGAGAGATATGGCTACTGAGTTCACTACGAAAGTTCGACTAGTTAGATGTCCTAAATGCCGGCTGCTTCTACCGGAGTTGCCGGATTTTCAGGTCTACAAGTGTGGTGGATGTGGTGCGATTCTCCAAGCGAAAAATCGTCTAAACGGTCTGAGAAGCAGGAGCACTGGTTTAAATGGAATAGTGGCAGCTCAGATGAATGATGGATTGGGTCACGTTTCTGAAGATAGGGCATCCAGCAGCACAAGTTGTAATGGAGCTCTTTCTGACTCGGGAGAATGCTCTTCAGACCAAATCGATGAGAAGAATCAAAGTAAGTTTTCCAGAGAATGCTCTTTGGAAAGAAAGAGTGAGAGGGATGAGAATGAGAATGAGTCTTCAGAAGGCACTGAATCTAGCAGCTCAAGTCTAAAGGGTAAGGCTCCTGCCTCGGGAGAATTATCTTTGGAAAGAAGGAATGAGAGGGATGGGAGTAATTCTTCAGAAGGCACTGAATCTAGCAGCTCAAGTCTAAAGGCTACAACTCCCGATTTGGGAGAATGCTCTTTGGAACGAAATAATGAGAGGGATGAGAGTAAGTCTTCAGAAGGCATTGAATATGGCAGCTTGTGTTTAAAGGCCAAGGCACCTGACTCGCTAGAATATTCTTTGGAACAAAACATTGAGAGGGATGAGAGTAAGTCTTCAAAAGGCCTTGAATCCAGCAGCTCAAGTCCCAAGGCTACAACTCCTGACTTGGGAGAATGCTCTTTGGAACAAAACATTGAGAGGGATGAGAGCAAGTCTTCAGAAGGCATTGAATCCAACAACTCAAGTCCAAAGGCTACCTTTCCTGACTCGGGAGAATGCTTTTCGGATCACAACAATGAGAATAATCAGAATAAGTTTTCTGAAGAAGAAGAATCTAGCAGCTTAAGTCAGAAGGCCATTCTTCCAGAATCAGGAGAATACACCTCAATTCAAAACAACGAGAGGGATCCTGATATTTCATCTGTAGAAGATTATGGTGGTGAGCAGCTTGGAGACTTGAACTTGCCAGATGAAAACCAAAACAACCAGAGTGATCAAAATGATTATGGTGACCTTGGTATCAAGCAACTCAGAGTTTCCAAAGAGAACTCATCATCAATGGAGTTGACAAATAATGAAAGTAACGAGTCATTGCCAATAACAGCAGCATGTTCAGCAGCATTGAAAGGTGATGAGAGTTCACCTTTAGCACCAAATGTAGAAGTAGACATTGAGGTGGAGATTGATTCTGATTCCACGAGCTCCAGTAGTAGTCTCAATGCAGCGGCCACAAGGGGTAGTAGTTCAATAGATCCTGCTCATATGCTCCCGAGGGAGAGCATTTCATCAGATATCATTCTATCTTCTCCTGATGAACAATCACATGCAAAAGCAGACATCAACATGGACGTTGATTCTGATTTCAGGAGAGCAAGTGTTATCAATCCAGGAGCTACAAGGGAAAGTGATGATACTGTTCACATGCCAGCACAAGAGAGCAGTTCATCAGGTACCCTTACTTCTTCTCCAAATGAACAACTCAACATGGACGTTGATTCTGATTTCAGGAGAGCAAGTGTTATCAATCCAGGAGCTACAAGGGAAAGTGATGTTACTGTTCACATGCCAGCACAAGAGAGCAGTTCATCAGATTTTCTCAGCCCCAGATCTGAGTTTAGCACTGCAGTTAGAGATAGATCGAAGTCCCCAGCAACTAGAAGCCATCATGCTTATGATGGAAGTGTCTCTTCTTATGATGGTATAGATGATCAGTTCTACAACCATAATCTACATACATTTCAAGATTCTTATAAAGTTCTGAACTTGGCTCAATCTGAAGAAAGATACAGAAGGGATAAGTTTCTGGCGGAAAGCATGGGAAATAGAGTCTCTGAATTAACAAGTCAGGCTAGGAGTTCCTGGTCAAGTCTGTCTGATAAGAATGGTTATGCCATGAAATACAGAAATCGGAATCAAGATGAATTGCTGCCACCTAGAAGACCAGGTCATCCAAGTCGAGATCATGCAAGAGTGCAGAGGAATGAATATATGCCTAGTATGGCTTCTCTTCAAAGAGGTTCCCTAGGTGGATATGGAAATGGACACTTCACAAATCAAATGCATAGTGAGTTCCAAAGCAATTCAGACTATCAATCTGACATGTCTGTGAGTGTTGGACCGGACAAGTTGACACTTCTGAGAATGGTTTATGAACTGCAGAAACAAGTTAACAATTTAAATGTGCATGCAAGTCGGCAGGAAAAGCATATTCCCCAGTACCATAATTATGAGGCATCTGCGGAGGAGCTTTTCCATGGCCTAAATCAGCCTAGGGATTTCGGAAGAAGCAGAGCGGGAAGCCATTATACCCAGCAAAGTCAGTACACACGAATACCTTTCTCCAGTGAGGCAACAACAAGCAGACACCAAGTTGATCCCTCCTATATGCATCACTGTCCTCCGGCCAGGCAGTACTCAGCACCAATGCCTCTACCTATCCGGTGCAATACTAATGGGTTACGCAGGGTTCATCCTGGTTATGCCTCAAGCCAGTGGGACAGTGAAACAATGTCTGATGATCTCAGGCACAACAGTCATGAGGTGAAGAAGTATTATGGAGAGAAACAACAGATGGCTAAGCGTCATTTCCTGCCAATAGCAGGTGGAGCTCCTATTGTGATTTGTTATAACTGCTTTAAGCCGCTGCAGATACCTGCAGATTTTCTTCTTTTCAAAAGGAGATGCCATAGACTTCAATGTGGTGCTTGCTTAAAGGTGCTTAAGTTTTCACTCCATAAGAGAACTCACATTGTCCCTTATGAAGTGAATGCTATAGGCCCTCCACCAAGTGAGGTTGCGGATCCTGTGTCGTGTTCTGATGATTATGGTTATGGACTCTCATACTGCAAAAGTGGCTCTACTGAAGCAGGATATGCTGTAAATGTAACACTCTCAAGCTCTGTCCAAAGTAATTCAGTTCATGAGAGAAATATGTCATATGGTTCAAACAATCCAACAAGAGGGAGACAGGGGATTGTTTTGAGACGCTCTCAATCTCAAAACAAAGACAAGAATCCAGTCGAAAGATTTGTGTCAGCAAGAACATCATCCAGTATATTGAAGTTAAAAAATCATTCCTCAGAAGTTGAGGAGCTGCCACCAAAGTCAAGCTCACCACTTCATCAACTCATGGGTTACAAATCGCCAAGTCAAGTGATTAGAGGGTCTGGTATATCTCGTTCAGGCACAAAAAGCTCATTAAGAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1148

Amino Acids

126.97

Weight (kDa)

5.66

Isoelectric Point (pI)

67.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR4-like_1st PF22910 66 - 99 3.9e-19 Enhanced disease resistance 4-like, N-terminal domain
Zn_ribbon_12 PF11331 945 - 989 7.5e-18 EDR4 zinc-ribbon domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1986, 2862
AarI CACCTGC 1 cut(s) 2825
Acc36I ACCTGC 2 cut(s) 2825, 2896
Acc65I GGTACC 1 cut(s) 1685
AccB1I GGYRCC 2 cut(s) 790, 1685
AccBSI CCGCTC 1 cut(s) 2528
AccI GTMKAC 2 cut(s) 261, 1401
AccII CGCG 1 cut(s) 28
AciI CCGC 7 cut(s) 26, 1460, 2042, 2474, 2528, 2876, 3032
AclWI GGATC 7 cut(s) 1029, 1136, 1149, 1481, 2603, 3029, 3042
AcoI YGGCCR 2 cut(s) 1461, 2637
AcsI RAATTY 1 cut(s) 116
AcuI CTGAAG 9 cut(s) 408, 435, 528, 630, 732, 936, 1077, 2031, 3117
AdeI CACNNNGTG 1 cut(s) 3023
AfaI GTAC 4 cut(s) 1687, 2453, 2558, 2648
AfiI CCNNNNNNNGG 7 cut(s) 596, 698, 902, 1004, 1106, 2834, 3194
AflII CTTAAG 2 cut(s) 1078, 2954
AflIII ACRYGT 1 cut(s) 2334
AhlI ACTAGT 1 cut(s) 205
AjnI CCWGG 6 cut(s) 1621, 1762, 2093, 2176, 2639, 2707
AjuI GAANNNNNNNTTGG 2 cut(s) 356, 388
Alw21I GWGCWC 4 cut(s) 332, 427, 1439, 2845
Alw26I GTCTC 6 cut(s) 1182, 1454, 1924, 2068, 3193, 3211
AlwI GGATC 7 cut(s) 1029, 1136, 1149, 1481, 2603, 3029, 3042
Ama87I CYCGRG 4 cut(s) 436, 595, 1003, 1504
AoxI GGCC 7 cut(s) 783, 856, 1089, 1461, 2491, 2637, 3010
ApoI RAATTY 1 cut(s) 116
Asp718I GGTACC 1 cut(s) 1685
AspA2I CCTAGG 2 cut(s) 2257, 2504
AspS9I GGNCC 2 cut(s) 2351, 3011
AsuHPI GGTGA 7 cut(s) 15, 1187, 1256, 1368, 1376, 2788, 3339
AvaI CYCGRG 4 cut(s) 436, 595, 1003, 1504
AvaII GGWCC 1 cut(s) 2351
AvrII CCTAGG 2 cut(s) 2257, 2504
BaeI ACNNNNGTAYC 2 cut(s) 1237, 1270
BamHI GGATCC 2 cut(s) 1141, 3034
BanI GGYRCC 2 cut(s) 790, 1685
BanII GRGCYC 3 cut(s) 427, 1439, 2845
BarI GAAGNNNNNNTAC 4 cut(s) 1678, 1710, 2524, 2556
BauI CACGAG 1 cut(s) 1432
BbsI GAAGAC 5 cut(s) 534, 738, 840, 942, 2179
Bbv12I GWGCWC 4 cut(s) 332, 427, 1439, 2845
BccI CCATC 7 cut(s) 117, 362, 626, 1904, 1905, 1925, 2800
BcgI CGANNNNNNTGC 4 cut(s) 780, 814, 2408, 2442
BciT130I CCWGG 6 cut(s) 1623, 1764, 2095, 2178, 2641, 2709
BclI TGATCA 2 cut(s) 1228, 1942
BcoDI GTCTC 6 cut(s) 1182, 1454, 1924, 2068, 3193, 3211
BcuI ACTAGT 1 cut(s) 205
BfmI CTRYAG 6 cut(s) 1158, 1857, 2390, 2879, 2889, 3006
BfrI CTTAAG 2 cut(s) 1078, 2954
BfuAI ACCTGC 2 cut(s) 2825, 2896
BglII AGATCT 1 cut(s) 1841
BlnI CCTAGG 2 cut(s) 2257, 2504
BlpI GCTNAGC 1 cut(s) 2811
BmcAI AGTACT 1 cut(s) 2648
Bme1390I CCNGG 6 cut(s) 1623, 1764, 2095, 2178, 2641, 2709
Bme18I GGWCC 1 cut(s) 2351
BmeT110I CYCGRG 4 cut(s) 436, 595, 1003, 1504
BmgT120I GGNCC 2 cut(s) 2351, 3011
BmiI GGNNCC 6 cut(s) 588, 792, 1143, 1687, 2254, 3036
BmrFI CCNGG 6 cut(s) 1623, 1764, 2095, 2178, 2641, 2709
BmrI ACTGGG 1 cut(s) 2443
BmsI GCATC 4 cut(s) 407, 2477, 2632, 2906
BmuI ACTGGG 1 cut(s) 2443
BpiI GAAGAC 5 cut(s) 534, 738, 840, 942, 2179
BplI GAGNNNNNCTC 2 cut(s) 3208, 3240
BpmI CTGGAG 2 cut(s) 1423, 2560
Bpu10I CCTNAGC 1 cut(s) 63
Bpu1102I GCTNAGC 1 cut(s) 2811
BpuEI CTTGAG 6 cut(s) 553, 655, 859, 961, 2704, 3112
Bsa29I ATCGAT 1 cut(s) 462
BsaJI CCNNGG 8 cut(s) 594, 786, 882, 1249, 1505, 2257, 2488, 2504
BsaWI WCCGGW 3 cut(s) 238, 2353, 2673
BsaXI ACNNNNNCTCC 8 cut(s) 319, 349, 1594, 1624, 1684, 1714, 1735, 1765
Bsc4I CCNNNNNNNGG 7 cut(s) 596, 698, 902, 1004, 1106, 2834, 3194
Bse118I RCCGGY 1 cut(s) 225
Bse1I ACTGG 7 cut(s) 337, 1440, 2449, 2577, 2725, 3251, 3285
Bse3DI GCAATG 1 cut(s) 1325
BseBI CCWGG 6 cut(s) 1623, 1764, 2095, 2178, 2641, 2709
BseCI ATCGAT 1 cut(s) 462
BseDI CCNNGG 8 cut(s) 594, 786, 882, 1249, 1505, 2257, 2488, 2504
BseLI CCNNNNNNNGG 7 cut(s) 596, 698, 902, 1004, 1106, 2834, 3194
BseMI GCAATG 1 cut(s) 1325
BseNI ACTGG 7 cut(s) 337, 1440, 2449, 2577, 2725, 3251, 3285
BseRI GAGGAG 2 cut(s) 2492, 3338
BseYI CCCAGC 2 cut(s) 1882, 2544
BsgI GTGCAG 1 cut(s) 2228
Bsh1236I CGCG 1 cut(s) 28
BshFI GGCC 7 cut(s) 785, 858, 1091, 1463, 2493, 2639, 3012
BshNI GGYRCC 2 cut(s) 790, 1685
BshVI ATCGAT 1 cut(s) 462
BsiHKAI GWGCWC 4 cut(s) 332, 427, 1439, 2845
BsiHKCI CYCGRG 4 cut(s) 436, 595, 1003, 1504
BsiSI CCGG 6 cut(s) 226, 239, 248, 2354, 2636, 2674
BslFI GGGAC 4 cut(s) 864, 1864, 2744, 2972
BslI CCNNNNNNNGG 7 cut(s) 596, 698, 902, 1004, 1106, 2834, 3194
BsmAI GTCTC 6 cut(s) 1182, 1454, 1924, 2068, 3193, 3211
BsmBI CGTCTC 1 cut(s) 3211
BsmFI GGGAC 4 cut(s) 864, 1864, 2744, 2972
BsmI GAATGC 7 cut(s) 107, 449, 500, 710, 914, 1016, 3007
BsnI GGCC 7 cut(s) 785, 858, 1091, 1463, 2493, 2639, 3012
BsoBI CYCGRG 4 cut(s) 436, 595, 1003, 1504
Bsp1286I GDGCHC 4 cut(s) 332, 427, 1439, 2845
Bsp1720I GCTNAGC 1 cut(s) 2811
Bsp19I CCATGG 1 cut(s) 2488
BspACI CCGC 7 cut(s) 26, 1460, 2042, 2474, 2528, 2876, 3032
BspANI GGCC 7 cut(s) 785, 858, 1091, 1463, 2493, 2639, 3012
BspDI ATCGAT 1 cut(s) 462
BspFNI CGCG 1 cut(s) 28
BspHI TCATGA 2 cut(s) 2770, 3154
BspLI GGNNCC 6 cut(s) 588, 792, 1143, 1687, 2254, 3036
BspMAI CTGCAG 4 cut(s) 1861, 2394, 2883, 2893
BspMI ACCTGC 2 cut(s) 2825, 2896
BspPI GGATC 7 cut(s) 1029, 1136, 1149, 1481, 2603, 3029, 3042
BspQI GCTCTTC 1 cut(s) 454
BspT107I GGYRCC 2 cut(s) 790, 1685
BspTI CTTAAG 2 cut(s) 1078, 2954
BsrBI CCGCTC 1 cut(s) 2528
BsrDI GCAATG 1 cut(s) 1325
BsrFI RCCGGY 1 cut(s) 225
BsrI ACTGG 7 cut(s) 337, 1440, 2449, 2577, 2725, 3251, 3285
BssAI RCCGGY 1 cut(s) 225
BssECI CCNNGG 8 cut(s) 594, 786, 882, 1249, 1505, 2257, 2488, 2504
BssSI CACGAG 1 cut(s) 1432
BssT1I CCWWGG 6 cut(s) 786, 882, 1249, 2257, 2488, 2504
Bst2BI CACGAG 1 cut(s) 1432
Bst2UI CCWGG 6 cut(s) 1623, 1764, 2095, 2178, 2641, 2709
Bst4CI ACNGT 6 cut(s) 314, 1651, 1792, 2630, 2735, 2768
Bst6I CTCTTC 3 cut(s) 454, 1927, 2247
BstAFI CTTAAG 2 cut(s) 1078, 2954
BstAPI GCANNNNNTGC 1 cut(s) 3107
BstC8I GCNNGC 5 cut(s) 227, 1662, 1803, 2421, 2941
BstDSI CCRYGG 1 cut(s) 2488
BstEII GGTNACC 1 cut(s) 1244
BstFNI CGCG 1 cut(s) 28
BstMAI GTCTC 6 cut(s) 1182, 1454, 1924, 2068, 3193, 3211
BstMWI GCNNNNNNNGC 6 cut(s) 1349, 2437, 2840, 3087, 3107, 3426
BstNI CCWGG 6 cut(s) 1623, 1764, 2095, 2178, 2641, 2709
BstNSI RCATGY 6 cut(s) 1347, 1562, 1660, 1801, 2338, 2423
BstPI GGTNACC 1 cut(s) 1244
BstSCI CCNGG 6 cut(s) 1621, 1762, 2093, 2176, 2639, 2707
BstSFI CTRYAG 6 cut(s) 1158, 1857, 2390, 2879, 2889, 3006
BstUI CGCG 1 cut(s) 28
BstV2I GAAGAC 5 cut(s) 534, 738, 840, 942, 2179
BstX2I RGATCY 4 cut(s) 1141, 1486, 1841, 3034
BstYI RGATCY 4 cut(s) 1141, 1486, 1841, 3034
Bsu15I ATCGAT 1 cut(s) 462
BsuRI GGCC 7 cut(s) 785, 858, 1091, 1463, 2493, 2639, 3012
BsuTUI ATCGAT 1 cut(s) 462
BtgI CCRYGG 1 cut(s) 2488
BtsI GCAGTG 1 cut(s) 1854
BtsIMutI CAGTG 8 cut(s) 330, 552, 654, 1854, 2584, 2626, 2732, 2740
BveI ACCTGC 2 cut(s) 2825, 2896
Cac8I GCNNGC 5 cut(s) 227, 1662, 1803, 2421, 2941
CciI TCATGA 2 cut(s) 2770, 3154
Cfr10I RCCGGY 1 cut(s) 225
Cfr13I GGNCC 2 cut(s) 2351, 3011
ClaI ATCGAT 1 cut(s) 462
CseI GACGC 2 cut(s) 2804, 3228
CsiI ACCWGGT 1 cut(s) 2176
Csp6I GTAC 4 cut(s) 1686, 2452, 2557, 2647
CspCI CAANNNNNGTGG 2 cut(s) 253, 288
CviQI GTAC 4 cut(s) 1686, 2452, 2557, 2647
DraI TTTAAA 3 cut(s) 339, 780, 2412
DraIII CACNNNGTG 1 cut(s) 3023
EaeI YGGCCR 2 cut(s) 1461, 2637
Eam1104I CTCTTC 3 cut(s) 454, 1927, 2247
EarI CTCTTC 3 cut(s) 454, 1927, 2247
EciI GGCGGA 1 cut(s) 2057
Ecl136II GAGCTC 3 cut(s) 425, 1437, 2843
Eco130I CCWWGG 6 cut(s) 786, 882, 1249, 2257, 2488, 2504
Eco147I AGGCCT 1 cut(s) 858
Eco24I GRGCYC 3 cut(s) 427, 1439, 2845
Eco32I GATATC 1 cut(s) 1528
Eco47I GGWCC 1 cut(s) 2351
Eco53kI GAGCTC 3 cut(s) 425, 1437, 2843
Eco57I CTGAAG 9 cut(s) 408, 435, 528, 630, 732, 936, 1077, 2031, 3117
Eco88I CYCGRG 4 cut(s) 436, 595, 1003, 1504
Eco91I GGTNACC 1 cut(s) 1244
EcoICRI GAGCTC 3 cut(s) 425, 1437, 2843
EcoO109I RGGNCCY 1 cut(s) 3011
EcoO65I GGTNACC 1 cut(s) 1244
EcoRI GAATTC 1 cut(s) 116
EcoRII CCWGG 6 cut(s) 1621, 1762, 2093, 2176, 2639, 2707
EcoRV GATATC 1 cut(s) 1528
EcoT14I CCWWGG 6 cut(s) 786, 882, 1249, 2257, 2488, 2504
EcoT22I ATGCAT 2 cut(s) 2298, 2625
EcoT38I GRGCYC 3 cut(s) 427, 1439, 2845
ErhI CCWWGG 6 cut(s) 786, 882, 1249, 2257, 2488, 2504
Esp3I CGTCTC 1 cut(s) 3211
FalI AAGNNNNNCTT 4 cut(s) 977, 1009, 1906, 1938
FaqI GGGAC 4 cut(s) 864, 1864, 2744, 2972
FauI CCCGC 1 cut(s) 2521
FauNDI CATATG 2 cut(s) 1497, 3172
FbaI TGATCA 2 cut(s) 1228, 1942
FblI GTMKAC 2 cut(s) 261, 1401
FriOI GRGCYC 3 cut(s) 427, 1439, 2845
GsaI CCCAGC 2 cut(s) 1886, 2548
GsuI CTGGAG 2 cut(s) 1423, 2560
HaeIII GGCC 7 cut(s) 785, 858, 1091, 1463, 2493, 2639, 3012
HapII CCGG 6 cut(s) 226, 239, 248, 2354, 2636, 2674
HgaI GACGC 2 cut(s) 2804, 3228
HincII GTYRAC 4 cut(s) 7, 1302, 2364, 2404
HindII GTYRAC 4 cut(s) 7, 1302, 2364, 2404
HindIII AAGCTT 1 cut(s) 15
HpaI GTTAAC 1 cut(s) 2404
HpaII CCGG 6 cut(s) 226, 239, 248, 2354, 2636, 2674
HphI GGTGA 7 cut(s) 15, 1187, 1256, 1368, 1376, 2788, 3339
HpyAV CCTTC 7 cut(s) 542, 612, 644, 746, 950, 1081, 2019
HpyCH4III ACNGT 6 cut(s) 314, 1651, 1792, 2630, 2735, 2768
HpyCH4IV ACGT 3 cut(s) 381, 1584, 1725
HpyF10VI GCNNNNNNNGC 6 cut(s) 1349, 2437, 2840, 3087, 3107, 3426
HpySE526I ACGT 3 cut(s) 381, 1584, 1725
KpnI GGTACC 1 cut(s) 1689
KroI GCCGGC 1 cut(s) 225
KroNI GCCGGC 1 cut(s) 227
Ksp22I TGATCA 2 cut(s) 1228, 1942
KspAI GTTAAC 1 cut(s) 2404
LguI GCTCTTC 1 cut(s) 454
LweI GCATC 4 cut(s) 407, 2477, 2632, 2906
MabI ACCWGGT 1 cut(s) 2176
MaeII ACGT 3 cut(s) 381, 1584, 1725
MaeIII GTNAC 7 cut(s) 377, 1244, 1316, 1786, 2691, 3118, 3368
MbiI CCGCTC 1 cut(s) 2528
MflI RGATCY 4 cut(s) 1141, 1486, 1841, 3034
MhlI GDGCHC 4 cut(s) 332, 427, 1439, 2845
MlyI GAGTC 7 cut(s) 428, 548, 791, 995, 1331, 2070, 3063
MmeI TCCRAC 3 cut(s) 993, 2329, 3212
Mph1103I ATGCAT 2 cut(s) 2298, 2625
MroNI GCCGGC 1 cut(s) 225
MslI CAYNNNNRTG 6 cut(s) 1029, 1409, 1577, 1905, 2339, 2460
MspA1I CMGCKG 2 cut(s) 1460, 2878
MspCI CTTAAG 2 cut(s) 1078, 2954
MspI CCGG 6 cut(s) 226, 239, 248, 2354, 2636, 2674
MspR9I CCNGG 6 cut(s) 1623, 1764, 2095, 2178, 2641, 2709
Mva1269I GAATGC 7 cut(s) 107, 449, 500, 710, 914, 1016, 3007
MvaI CCWGG 6 cut(s) 1623, 1764, 2095, 2178, 2641, 2709
MvnI CGCG 1 cut(s) 28
MwoI GCNNNNNNNGC 6 cut(s) 1349, 2437, 2840, 3087, 3107, 3426
NaeI GCCGGC 1 cut(s) 227
NcoI CCATGG 1 cut(s) 2488
NdeI CATATG 2 cut(s) 1497, 3172
NgoMIV GCCGGC 1 cut(s) 225
NlaIV GGNNCC 6 cut(s) 588, 792, 1143, 1687, 2254, 3036
NmuCI GTSAC 2 cut(s) 377, 1244
NsiI ATGCAT 2 cut(s) 2298, 2625
NspI RCATGY 6 cut(s) 1347, 1562, 1660, 1801, 2338, 2423
PaeI GCATGC 1 cut(s) 2423
PagI TCATGA 2 cut(s) 2770, 3154
PaqCI CACCTGC 1 cut(s) 2825
PceI AGGCCT 1 cut(s) 858
PciI ACATGT 1 cut(s) 2334
PciSI GCTCTTC 1 cut(s) 454
PctI GAATGC 7 cut(s) 107, 449, 500, 710, 914, 1016, 3007
PdiI GCCGGC 1 cut(s) 227
PflFI GACNNNGTC 1 cut(s) 2178
PfoI TCCNGGA 2 cut(s) 1621, 1762
PleI GAGTC 7 cut(s) 428, 547, 791, 995, 1330, 2069, 3063
PpsI GAGTC 7 cut(s) 428, 547, 791, 995, 1330, 2069, 3063
PscI ACATGT 1 cut(s) 2334
PsiI TTATAA 2 cut(s) 1986, 2862
Psp124BI GAGCTC 3 cut(s) 427, 1439, 2845
Psp6I CCWGG 6 cut(s) 1621, 1762, 2093, 2176, 2639, 2707
PspEI GGTNACC 1 cut(s) 1244
PspFI CCCAGC 2 cut(s) 1882, 2544
PspGI CCWGG 6 cut(s) 1621, 1762, 2093, 2176, 2639, 2707
PspN4I GGNNCC 6 cut(s) 588, 792, 1143, 1687, 2254, 3036
PspPI GGNCC 2 cut(s) 2351, 3011
PsrI GAACNNNNNNTAC 2 cut(s) 3397, 3429
PstI CTGCAG 4 cut(s) 1861, 2394, 2883, 2893
PsuI RGATCY 4 cut(s) 1141, 1486, 1841, 3034
PsyI GACNNNGTC 1 cut(s) 2178
RsaI GTAC 4 cut(s) 1687, 2453, 2558, 2648
RsaNI GTAC 4 cut(s) 1686, 2452, 2557, 2647
RseI CAYNNNNRTG 6 cut(s) 1029, 1409, 1577, 1905, 2339, 2460
SacI GAGCTC 3 cut(s) 427, 1439, 2845
SapI GCTCTTC 1 cut(s) 454
Sau96I GGNCC 2 cut(s) 2351, 3011
ScaI AGTACT 1 cut(s) 2648
SchI GAGTC 7 cut(s) 428, 548, 791, 995, 1331, 2070, 3063
ScrFI CCNGG 6 cut(s) 1623, 1764, 2095, 2178, 2641, 2709
SduI GDGCHC 4 cut(s) 332, 427, 1439, 2845
SexAI ACCWGGT 1 cut(s) 2176
SfaNI GCATC 4 cut(s) 407, 2477, 2632, 2906
SfcI CTRYAG 6 cut(s) 1158, 1857, 2390, 2879, 2889, 3006
SinI GGWCC 1 cut(s) 2351
SmiI ATTTAAAT 1 cut(s) 2412
SmiMI CAYNNNNRTG 6 cut(s) 1029, 1409, 1577, 1905, 2339, 2460
SmlI CTYRAG 8 cut(s) 568, 670, 874, 976, 1078, 2719, 2954, 3127
SmoI CTYRAG 8 cut(s) 568, 670, 874, 976, 1078, 2719, 2954, 3127
SpeI ACTAGT 1 cut(s) 205
SphI GCATGC 1 cut(s) 2423
SseBI AGGCCT 1 cut(s) 858
SsiI CCGC 7 cut(s) 26, 1460, 2042, 2474, 2528, 2876, 3032
SspI AATATT 1 cut(s) 809
SstI GAGCTC 3 cut(s) 427, 1439, 2845
StuI AGGCCT 1 cut(s) 858
StyD4I CCNGG 6 cut(s) 1621, 1762, 2093, 2176, 2639, 2707
StyI CCWWGG 6 cut(s) 786, 882, 1249, 2257, 2488, 2504
SwaI ATTTAAAT 1 cut(s) 2412
TaaI ACNGT 6 cut(s) 314, 1651, 1792, 2630, 2735, 2768
TaiI ACGT 3 cut(s) 384, 1587, 1728
TaqI TCGA 6 cut(s) 12, 202, 462, 1874, 2191, 3255
TatI WGTACW 2 cut(s) 2556, 2646
TauI GCSGC 2 cut(s) 1463, 2878
TscAI CASTG 8 cut(s) 337, 559, 661, 1861, 2584, 2633, 2732, 2740
TseFI GTSAC 2 cut(s) 377, 1244
Tsp45I GTSAC 2 cut(s) 377, 1244
TspRI CASTG 8 cut(s) 337, 559, 661, 1861, 2584, 2633, 2732, 2740
Tth111I GACNNNGTC 1 cut(s) 2178
Vha464I CTTAAG 2 cut(s) 1078, 2954
VpaK11BI GGWCC 1 cut(s) 2351
XapI RAATTY 1 cut(s) 116
XceI RCATGY 6 cut(s) 1347, 1562, 1660, 1801, 2338, 2423
XmaJI CCTAGG 2 cut(s) 2257, 2504
XmiI GTMKAC 2 cut(s) 261, 1401
ZrmI AGTACT 1 cut(s) 2648
Zsp2I ATGCAT 2 cut(s) 2298, 2625
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.