Probable zinc-ribbon domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G05190 |
| fragaria_vesca | FvH4_7g26160 |
| malus_domestica | MD01G1169800.v1.1 MD01G1169900.v1.1 MD07G1235500.v1.1 |
| prunus_persica | Prupe.2G265800_v2.0.a1 Prupe.2G265800_v2.0.a1 Prupe.2G265800_v2.0.a1 Prupe.4G213000_v2.0.a1 Prupe.4G213000_v2.0.a1 Prupe.4G213000_v2.0.a1 Prupe.4G213000_v2.0.a1 Prupe.4G213000_v2.0.a1 |
| pyrus_communis | pycom01g18250 pycom01g18260 pycom07g21310 |
| rosa_chinensis | RchiOBHm_Chr1g0372591 RchiOBHm_Chr4g0399021 RchiOBHm_Chr5g0049731 RchiOBHm_Chr7g0243711 |
| rosa_laevigata | RLG00000001030 RLG00000008808 RLG00000010509 RLG00000026888 |
| rosa_multiflora | Rmu_ssc0000419.1_g000010 |
| rosa_roxburghii | Rroxscaffold_7G00208520 |
| rosa_rugosa | Rorug01G0066000 Rorug01G0373300 |
| rosa_samantha | Rh1AG381600 Rh1BG345000 Rh1CG358400 Rh1DG376200 Rh2BG091800 Rh3DG186100 Rh4DG129900 Rh5AG465400 Rh7AG476000 |
| rosa_wichuraiana | Rw0G018150 Rw1G033560 Rw2G022780 Rw7G041610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 3218 |
| Acc36I | ACCTGC | 2 cut(s) | 3218, 3289 |
| AccB1I | GGYRCC | 2 cut(s) | 2931, 3153 |
| AccI | GTMKAC | 4 cut(s) | 87, 459, 642, 2899 |
| AccIII | TCCGGA | 1 cut(s) | 260 |
| AcoI | YGGCCR | 1 cut(s) | 1923 |
| AcsI | RAATTY | 6 cut(s) | 736, 1289, 1493, 1703, 2342, 2410 |
| AcvI | CACGTG | 1 cut(s) | 1730 |
| AfaI | GTAC | 8 cut(s) | 36, 337, 520, 706, 892, 2615, 2780, 3098 |
| AfeI | AGCGCT | 1 cut(s) | 157 |
| AflII | CTTAAG | 1 cut(s) | 1204 |
| AflIII | ACRYGT | 1 cut(s) | 2297 |
| AjnI | CCWGG | 5 cut(s) | 1018, 2402, 3040, 3544, 3786 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3182, 3214 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2264, 2296 |
| Alw21I | GWGCWC | 6 cut(s) | 1799, 1865, 2194, 2984, 3348, 3553 |
| Alw26I | GTCTC | 8 cut(s) | 9, 941, 1145, 1739, 2142, 3078, 3643, 3660 |
| Alw44I | GTGCAC | 1 cut(s) | 2190 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 455, 3054 |
| Ama87I | CYCGRG | 5 cut(s) | 129, 436, 619, 805, 1429 |
| Aor13HI | TCCGGA | 1 cut(s) | 260 |
| Aor51HI | AGCGCT | 1 cut(s) | 157 |
| AoxI | GGCC | 5 cut(s) | 1923, 2488, 2587, 2772, 3124 |
| ApaLI | GTGCAC | 1 cut(s) | 2190 |
| ApoI | RAATTY | 6 cut(s) | 736, 1289, 1493, 1703, 2342, 2410 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 991, 1023, 1478, 1510 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1900, 2560 |
| AspLEI | GCGC | 3 cut(s) | 158, 1133, 1505 |
| AspS9I | GGNCC | 9 cut(s) | 934, 1036, 1243, 1345, 2211, 2698, 2773, 3124, 3506 |
| AsuHPI | GGTGA | 5 cut(s) | 1791, 3029, 3551, 3741, 3802 |
| AsuII | TTCGAA | 3 cut(s) | 377, 560, 746 |
| AsuNHI | GCTAGC | 1 cut(s) | 158 |
| AvaI | CYCGRG | 5 cut(s) | 129, 436, 619, 805, 1429 |
| AvaII | GGWCC | 7 cut(s) | 934, 1036, 1243, 1345, 2211, 2698, 3506 |
| AxyI | CCTNAGG | 7 cut(s) | 342, 525, 711, 1093, 1212, 1327, 1410 |
| BaeGI | GKGCMC | 2 cut(s) | 1544, 2194 |
| BamHI | GGATCC | 1 cut(s) | 2398 |
| BanI | GGYRCC | 2 cut(s) | 2931, 3153 |
| BanII | GRGCYC | 4 cut(s) | 1799, 1865, 3238, 3553 |
| BauI | CACGAG | 2 cut(s) | 894, 1665 |
| BbrPI | CACGTG | 1 cut(s) | 1730 |
| Bbv12I | GWGCWC | 6 cut(s) | 1799, 1865, 2194, 2984, 3348, 3553 |
| BccI | CCATC | 3 cut(s) | 2258, 2499, 2536 |
| BceAI | ACGGC | 1 cut(s) | 3111 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 3416, 3450, 3687, 3721 |
| BciT130I | CCWGG | 5 cut(s) | 1020, 2404, 3042, 3546, 3788 |
| BciVI | GTATCC | 1 cut(s) | 2567 |
| BclI | TGATCA | 4 cut(s) | 1594, 1651, 2125, 2428 |
| BcoDI | GTCTC | 8 cut(s) | 9, 941, 1145, 1739, 2142, 3078, 3643, 3660 |
| BfmI | CTRYAG | 5 cut(s) | 456, 2693, 3272, 3282, 3399 |
| BfoI | RGCGCY | 1 cut(s) | 159 |
| BfrI | CTTAAG | 1 cut(s) | 1204 |
| BfuAI | ACCTGC | 2 cut(s) | 3218, 3289 |
| BfuI | GTATCC | 1 cut(s) | 2567 |
| BglII | AGATCT | 1 cut(s) | 2200 |
| BlpI | GCTNAGC | 4 cut(s) | 1394, 2183, 2983, 3204 |
| BmcAI | AGTACT | 4 cut(s) | 337, 520, 706, 892 |
| Bme1390I | CCNGG | 5 cut(s) | 1020, 2404, 3042, 3546, 3788 |
| Bme18I | GGWCC | 7 cut(s) | 934, 1036, 1243, 1345, 2211, 2698, 3506 |
| BmeT110I | CYCGRG | 5 cut(s) | 129, 436, 619, 805, 1429 |
| BmgT120I | GGNCC | 9 cut(s) | 934, 1036, 1243, 1345, 2211, 2698, 2773, 3124, 3506 |
| BmrFI | CCNGG | 5 cut(s) | 1020, 2404, 3042, 3546, 3788 |
| BmrI | ACTGGG | 1 cut(s) | 2770 |
| BmsI | GCATC | 7 cut(s) | 996, 1839, 2134, 2233, 2452, 2728, 2804 |
| BmtI | GCTAGC | 1 cut(s) | 162 |
| BmuI | ACTGGG | 1 cut(s) | 2770 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3640, 3672 |
| BpmI | CTGGAG | 1 cut(s) | 2108 |
| Bpu1102I | GCTNAGC | 4 cut(s) | 1394, 2183, 2983, 3204 |
| Bpu14I | TTCGAA | 3 cut(s) | 377, 560, 746 |
| BpuEI | CTTGAG | 8 cut(s) | 316, 499, 685, 932, 1285, 1387, 2198, 2893 |
| BsaAI | YACGTR | 2 cut(s) | 1730, 3100 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1593, 3672 |
| BsaI | GGTCTC | 1 cut(s) | 2142 |
| BsaJI | CCNNGG | 7 cut(s) | 1018, 1988, 2402, 2566, 2799, 3040, 3574 |
| BsaWI | WCCGGW | 3 cut(s) | 82, 260, 3591 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2056, 2086 |
| Bse118I | RCCGGY | 1 cut(s) | 51 |
| Bse1I | ACTGG | 6 cut(s) | 1347, 1557, 2091, 2247, 2776, 2978 |
| Bse21I | CCTNAGG | 7 cut(s) | 342, 525, 711, 1093, 1212, 1327, 1410 |
| Bse3DI | GCAATG | 4 cut(s) | 691, 1579, 1975, 2046 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1593, 3672 |
| BseAI | TCCGGA | 1 cut(s) | 260 |
| BseBI | CCWGG | 5 cut(s) | 1020, 2404, 3042, 3546, 3788 |
| BseDI | CCNNGG | 7 cut(s) | 1018, 1988, 2402, 2566, 2799, 3040, 3574 |
| BseGI | GGATG | 9 cut(s) | 107, 403, 586, 2491, 2547, 2743, 2795, 3059, 3496 |
| BseJI | GATNNNNATC | 2 cut(s) | 1593, 3672 |
| BseMI | GCAATG | 4 cut(s) | 691, 1579, 1975, 2046 |
| BseNI | ACTGG | 6 cut(s) | 1347, 1557, 2091, 2247, 2776, 2978 |
| BseRI | GAGGAG | 5 cut(s) | 1242, 2760, 2816, 3399, 3740 |
| BseSI | GKGCMC | 2 cut(s) | 1544, 2194 |
| BseYI | CCCAGC | 2 cut(s) | 2171, 2215 |
| BsgI | GTGCAG | 1 cut(s) | 1791 |
| BshFI | GGCC | 5 cut(s) | 1925, 2490, 2589, 2774, 3126 |
| BshNI | GGYRCC | 2 cut(s) | 2931, 3153 |
| BsiHKAI | GWGCWC | 6 cut(s) | 1799, 1865, 2194, 2984, 3348, 3553 |
| BsiHKCI | CYCGRG | 5 cut(s) | 129, 436, 619, 805, 1429 |
| BsiSI | CCGG | 5 cut(s) | 52, 74, 83, 261, 3592 |
| BslFI | GGGAC | 2 cut(s) | 2197, 3365 |
| BsmAI | GTCTC | 8 cut(s) | 9, 941, 1145, 1739, 2142, 3078, 3643, 3660 |
| BsmBI | CGTCTC | 1 cut(s) | 941 |
| BsmFI | GGGAC | 2 cut(s) | 2197, 3365 |
| BsmI | GAATGC | 4 cut(s) | 272, 1133, 2546, 3400 |
| BsnI | GGCC | 5 cut(s) | 1925, 2490, 2589, 2774, 3126 |
| Bso31I | GGTCTC | 1 cut(s) | 2142 |
| BsoBI | CYCGRG | 5 cut(s) | 129, 436, 619, 805, 1429 |
| Bsp119I | TTCGAA | 3 cut(s) | 377, 560, 746 |
| Bsp1286I | GDGCHC | 8 cut(s) | 1544, 1799, 1865, 2194, 2984, 3238, 3348, 3553 |
| Bsp13I | TCCGGA | 1 cut(s) | 260 |
| Bsp1720I | GCTNAGC | 4 cut(s) | 1394, 2183, 2983, 3204 |
| BspANI | GGCC | 5 cut(s) | 1925, 2490, 2589, 2774, 3126 |
| BspEI | TCCGGA | 1 cut(s) | 260 |
| BspHI | TCATGA | 2 cut(s) | 1597, 2815 |
| BspMAI | CTGCAG | 3 cut(s) | 2697, 3276, 3286 |
| BspMI | ACCTGC | 2 cut(s) | 3218, 3289 |
| BspOI | GCTAGC | 1 cut(s) | 162 |
| BspQI | GCTCTTC | 3 cut(s) | 277, 828, 2759 |
| BspT104I | TTCGAA | 3 cut(s) | 377, 560, 746 |
| BspT107I | GGYRCC | 2 cut(s) | 2931, 3153 |
| BspTI | CTTAAG | 1 cut(s) | 1204 |
| BspTNI | GGTCTC | 1 cut(s) | 2142 |
| BsrDI | GCAATG | 4 cut(s) | 691, 1579, 1975, 2046 |
| BsrFI | RCCGGY | 1 cut(s) | 51 |
| BsrI | ACTGG | 6 cut(s) | 1347, 1557, 2091, 2247, 2776, 2978 |
| BssAI | RCCGGY | 1 cut(s) | 51 |
| BssECI | CCNNGG | 7 cut(s) | 1018, 1988, 2402, 2566, 2799, 3040, 3574 |
| BssNAI | GTATAC | 1 cut(s) | 2900 |
| BssSI | CACGAG | 2 cut(s) | 894, 1665 |
| BssT1I | CCWWGG | 2 cut(s) | 2566, 3574 |
| Bst1107I | GTATAC | 1 cut(s) | 2900 |
| Bst2BI | CACGAG | 2 cut(s) | 894, 1665 |
| Bst2UI | CCWGG | 5 cut(s) | 1020, 2404, 3042, 3546, 3788 |
| BstAFI | CTTAAG | 1 cut(s) | 1204 |
| BstBAI | YACGTR | 2 cut(s) | 1730, 3100 |
| BstBI | TTCGAA | 3 cut(s) | 377, 560, 746 |
| BstC8I | GCNNGC | 8 cut(s) | 53, 160, 1388, 2857, 2930, 3334, 3696, 3735 |
| BstENI | CCTNNNNNAGG | 5 cut(s) | 360, 543, 729, 1326, 1380 |
| BstF5I | GGATG | 9 cut(s) | 107, 403, 586, 2491, 2547, 2743, 2795, 3059, 3496 |
| BstH2I | RGCGCY | 1 cut(s) | 159 |
| BstHHI | GCGC | 3 cut(s) | 158, 1133, 1505 |
| BstMAI | GTCTC | 8 cut(s) | 9, 941, 1145, 1739, 2142, 3078, 3643, 3660 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 242, 1922, 2030, 2243, 2496, 2747, 3160, 3233, 3467 |
| BstNI | CCWGG | 5 cut(s) | 1020, 2404, 3042, 3546, 3788 |
| BstNSI | RCATGY | 2 cut(s) | 2896, 3470 |
| BstSCI | CCNGG | 5 cut(s) | 1018, 2402, 3040, 3544, 3786 |
| BstSFI | CTRYAG | 5 cut(s) | 456, 2693, 3272, 3282, 3399 |
| BstSLI | GKGCMC | 2 cut(s) | 1544, 2194 |
| BstX2I | RGATCY | 4 cut(s) | 1082, 1363, 2200, 2398 |
| BstYI | RGATCY | 4 cut(s) | 1082, 1363, 2200, 2398 |
| BstZ17I | GTATAC | 1 cut(s) | 2900 |
| Bsu36I | CCTNAGG | 7 cut(s) | 342, 525, 711, 1093, 1212, 1327, 1410 |
| BsuI | GTATCC | 1 cut(s) | 2567 |
| BsuRI | GGCC | 5 cut(s) | 1925, 2490, 2589, 2774, 3126 |
| BtgZI | GCGATG | 1 cut(s) | 2450 |
| BtsCI | GGATG | 9 cut(s) | 107, 403, 586, 2491, 2547, 2743, 2795, 3059, 3496 |
| BtsI | GCAGTG | 1 cut(s) | 2984 |
| BtsIMutI | CAGTG | 4 cut(s) | 171, 2254, 2881, 2984 |
| BveI | ACCTGC | 2 cut(s) | 3218, 3289 |
| Cac8I | GCNNGC | 8 cut(s) | 53, 160, 1388, 2857, 2930, 3334, 3696, 3735 |
| CaiI | CAGNNNCTG | 2 cut(s) | 455, 3054 |
| CciI | TCATGA | 2 cut(s) | 1597, 2815 |
| CfoI | GCGC | 3 cut(s) | 158, 1133, 1505 |
| Cfr10I | RCCGGY | 1 cut(s) | 51 |
| Cfr13I | GGNCC | 9 cut(s) | 934, 1036, 1243, 1345, 2211, 2698, 2773, 3124, 3506 |
| Csp6I | GTAC | 8 cut(s) | 35, 336, 519, 705, 891, 2614, 2779, 3097 |
| CviQI | GTAC | 8 cut(s) | 35, 336, 519, 705, 891, 2614, 2779, 3097 |
| EaeI | YGGCCR | 1 cut(s) | 1923 |
| EciI | GGCGGA | 2 cut(s) | 114, 2586 |
| Ecl136II | GAGCTC | 3 cut(s) | 1797, 1863, 3551 |
| Eco130I | CCWWGG | 2 cut(s) | 2566, 3574 |
| Eco147I | AGGCCT | 1 cut(s) | 2589 |
| Eco24I | GRGCYC | 4 cut(s) | 1799, 1865, 3238, 3553 |
| Eco31I | GGTCTC | 1 cut(s) | 2142 |
| Eco47I | GGWCC | 7 cut(s) | 934, 1036, 1243, 1345, 2211, 2698, 3506 |
| Eco47III | AGCGCT | 1 cut(s) | 157 |
| Eco53kI | GAGCTC | 3 cut(s) | 1797, 1863, 3551 |
| Eco72I | CACGTG | 1 cut(s) | 1730 |
| Eco81I | CCTNAGG | 7 cut(s) | 342, 525, 711, 1093, 1212, 1327, 1410 |
| Eco88I | CYCGRG | 5 cut(s) | 129, 436, 619, 805, 1429 |
| EcoICRI | GAGCTC | 3 cut(s) | 1797, 1863, 3551 |
| EcoNI | CCTNNNNNAGG | 5 cut(s) | 360, 543, 729, 1326, 1380 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2211 |
| EcoRII | CCWGG | 5 cut(s) | 1018, 2402, 3040, 3544, 3786 |
| EcoT14I | CCWWGG | 2 cut(s) | 2566, 3574 |
| EcoT22I | ATGCAT | 2 cut(s) | 2149, 2467 |
| EcoT38I | GRGCYC | 4 cut(s) | 1799, 1865, 3238, 3553 |
| ErhI | CCWWGG | 2 cut(s) | 2566, 3574 |
| Esp3I | CGTCTC | 1 cut(s) | 941 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 913, 945, 1360, 1392 |
| FaqI | GGGAC | 2 cut(s) | 2197, 3365 |
| FauNDI | CATATG | 2 cut(s) | 1920, 2028 |
| FbaI | TGATCA | 4 cut(s) | 1594, 1651, 2125, 2428 |
| FblI | GTMKAC | 4 cut(s) | 87, 459, 642, 2899 |
| FokI | GGATG | 9 cut(s) | 114, 410, 593, 2478, 2554, 2750, 2782, 3046, 3503 |
| FriOI | GRGCYC | 4 cut(s) | 1799, 1865, 3238, 3553 |
| GlaI | GCGC | 3 cut(s) | 157, 1132, 1504 |
| GsaI | CCCAGC | 2 cut(s) | 2175, 2219 |
| GsuI | CTGGAG | 1 cut(s) | 2108 |
| HaeII | RGCGCY | 1 cut(s) | 159 |
| HaeIII | GGCC | 5 cut(s) | 1925, 2490, 2589, 2774, 3126 |
| HapII | CCGG | 5 cut(s) | 52, 74, 83, 261, 3592 |
| HhaI | GCGC | 3 cut(s) | 158, 1133, 1505 |
| Hin6I | GCGC | 3 cut(s) | 156, 1131, 1503 |
| HinP1I | GCGC | 3 cut(s) | 156, 1131, 1503 |
| HincII | GTYRAC | 1 cut(s) | 2707 |
| HindII | GTYRAC | 1 cut(s) | 2707 |
| HindIII | AAGCTT | 2 cut(s) | 3176, 3638 |
| HpaI | GTTAAC | 1 cut(s) | 2707 |
| HpaII | CCGG | 5 cut(s) | 52, 74, 83, 261, 3592 |
| HphI | GGTGA | 5 cut(s) | 1791, 3029, 3551, 3741, 3802 |
| Hpy99I | CGWCG | 3 cut(s) | 842, 2556, 3709 |
| HpyCH4IV | ACGT | 5 cut(s) | 1729, 1824, 2299, 2386, 3099 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 242, 1922, 2030, 2243, 2496, 2747, 3160, 3233, 3467 |
| HpySE526I | ACGT | 5 cut(s) | 1729, 1824, 2299, 2386, 3099 |
| HspAI | GCGC | 3 cut(s) | 156, 1131, 1503 |
| Kpn2I | TCCGGA | 1 cut(s) | 260 |
| KroI | GCCGGC | 1 cut(s) | 51 |
| KroNI | GCCGGC | 1 cut(s) | 53 |
| Ksp22I | TGATCA | 4 cut(s) | 1594, 1651, 2125, 2428 |
| KspAI | GTTAAC | 1 cut(s) | 2707 |
| LguI | GCTCTTC | 3 cut(s) | 277, 828, 2759 |
| LmnI | GCTCC | 8 cut(s) | 457, 640, 1261, 2747, 3233, 3363, 3548, 3727 |
| LweI | GCATC | 7 cut(s) | 996, 1839, 2134, 2233, 2452, 2728, 2804 |
| MaeII | ACGT | 5 cut(s) | 1729, 1824, 2299, 2386, 3099 |
| MaeIII | GTNAC | 6 cut(s) | 109, 2017, 3044, 3251, 3500, 3524 |
| MfeI | CAATTG | 2 cut(s) | 1905, 3678 |
| MflI | RGATCY | 4 cut(s) | 1082, 1363, 2200, 2398 |
| MhlI | GDGCHC | 8 cut(s) | 1544, 1799, 1865, 2194, 2984, 3238, 3348, 3553 |
| MmeI | TCCRAC | 3 cut(s) | 1588, 3241, 3588 |
| Mph1103I | ATGCAT | 2 cut(s) | 2149, 2467 |
| MroI | TCCGGA | 1 cut(s) | 260 |
| MroNI | GCCGGC | 1 cut(s) | 51 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1900, 2560 |
| MseI | TTAA | 5 cut(s) | 164, 1205, 1269, 1740, 2706 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1146, 2238 |
| MspA1I | CMGCKG | 1 cut(s) | 2054 |
| MspCI | CTTAAG | 1 cut(s) | 1204 |
| MspI | CCGG | 5 cut(s) | 52, 74, 83, 261, 3592 |
| MspR9I | CCNGG | 5 cut(s) | 1020, 2404, 3042, 3546, 3788 |
| MunI | CAATTG | 2 cut(s) | 1905, 3678 |
| Mva1269I | GAATGC | 4 cut(s) | 272, 1133, 2546, 3400 |
| MvaI | CCWGG | 5 cut(s) | 1020, 2404, 3042, 3546, 3788 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 242, 1922, 2030, 2243, 2496, 2747, 3160, 3233, 3467 |
| NaeI | GCCGGC | 1 cut(s) | 53 |
| NdeI | CATATG | 2 cut(s) | 1920, 2028 |
| NgoMIV | GCCGGC | 1 cut(s) | 51 |
| NheI | GCTAGC | 1 cut(s) | 158 |
| NmeAIII | GCCGAG | 1 cut(s) | 2525 |
| NmuCI | GTSAC | 2 cut(s) | 109, 3044 |
| NsiI | ATGCAT | 2 cut(s) | 2149, 2467 |
| NspI | RCATGY | 2 cut(s) | 2896, 3470 |
| NspV | TTCGAA | 3 cut(s) | 377, 560, 746 |
| PaeR7I | CTCGAG | 4 cut(s) | 129, 436, 619, 805 |
| PagI | TCATGA | 2 cut(s) | 1597, 2815 |
| PaqCI | CACCTGC | 1 cut(s) | 3218 |
| PceI | AGGCCT | 1 cut(s) | 2589 |
| PciSI | GCTCTTC | 3 cut(s) | 277, 828, 2759 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 34 |
| PctI | GAATGC | 4 cut(s) | 272, 1133, 2546, 3400 |
| PdiI | GCCGGC | 1 cut(s) | 53 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1900, 2560 |
| PfoI | TCCNGGA | 1 cut(s) | 3544 |
| PmaCI | CACGTG | 1 cut(s) | 1730 |
| PmlI | CACGTG | 1 cut(s) | 1730 |
| Ppu21I | YACGTR | 2 cut(s) | 1730, 3100 |
| PpuMI | RGGWCCY | 1 cut(s) | 2211 |
| Psp124BI | GAGCTC | 3 cut(s) | 1799, 1865, 3553 |
| Psp5II | RGGWCCY | 1 cut(s) | 2211 |
| Psp6I | CCWGG | 5 cut(s) | 1018, 2402, 3040, 3544, 3786 |
| PspCI | CACGTG | 1 cut(s) | 1730 |
| PspFI | CCCAGC | 2 cut(s) | 2171, 2215 |
| PspGI | CCWGG | 5 cut(s) | 1018, 2402, 3040, 3544, 3786 |
| PspPI | GGNCC | 9 cut(s) | 934, 1036, 1243, 1345, 2211, 2698, 2773, 3124, 3506 |
| PspPPI | RGGWCCY | 1 cut(s) | 2211 |
| PspXI | VCTCGAGB | 4 cut(s) | 129, 436, 619, 805 |
| PstI | CTGCAG | 3 cut(s) | 2697, 3276, 3286 |
| PstNI | CAGNNNCTG | 2 cut(s) | 455, 3054 |
| PsuI | RGATCY | 4 cut(s) | 1082, 1363, 2200, 2398 |
| RsaI | GTAC | 8 cut(s) | 36, 337, 520, 706, 892, 2615, 2780, 3098 |
| RsaNI | GTAC | 8 cut(s) | 35, 336, 519, 705, 891, 2614, 2779, 3097 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1146, 2238 |
| SacI | GAGCTC | 3 cut(s) | 1799, 1865, 3553 |
| SapI | GCTCTTC | 3 cut(s) | 277, 828, 2759 |
| SaqAI | TTAA | 5 cut(s) | 164, 1205, 1269, 1740, 2706 |
| Sau96I | GGNCC | 9 cut(s) | 934, 1036, 1243, 1345, 2211, 2698, 2773, 3124, 3506 |
| ScaI | AGTACT | 4 cut(s) | 337, 520, 706, 892 |
| ScrFI | CCNGG | 5 cut(s) | 1020, 2404, 3042, 3546, 3788 |
| SduI | GDGCHC | 8 cut(s) | 1544, 1799, 1865, 2194, 2984, 3238, 3348, 3553 |
| SfaNI | GCATC | 7 cut(s) | 996, 1839, 2134, 2233, 2452, 2728, 2804 |
| SfcI | CTRYAG | 5 cut(s) | 456, 2693, 3272, 3282, 3399 |
| Sfr274I | CTCGAG | 4 cut(s) | 129, 436, 619, 805 |
| SfuI | TTCGAA | 3 cut(s) | 377, 560, 746 |
| SinI | GGWCC | 7 cut(s) | 934, 1036, 1243, 1345, 2211, 2698, 3506 |
| SlaI | CTCGAG | 4 cut(s) | 129, 436, 619, 805 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1146, 2238 |
| SseBI | AGGCCT | 1 cut(s) | 2589 |
| SstI | GAGCTC | 3 cut(s) | 1799, 1865, 3553 |
| StuI | AGGCCT | 1 cut(s) | 2589 |
| StyD4I | CCNGG | 5 cut(s) | 1018, 2402, 3040, 3544, 3786 |
| StyI | CCWWGG | 2 cut(s) | 2566, 3574 |
| TaiI | ACGT | 5 cut(s) | 1732, 1827, 2302, 2389, 3102 |
| TatI | WGTACW | 4 cut(s) | 335, 518, 704, 890 |
| TauI | GCSGC | 4 cut(s) | 99, 435, 1928, 3443 |
| Tru1I | TTAA | 5 cut(s) | 164, 1205, 1269, 1740, 2706 |
| Tru9I | TTAA | 5 cut(s) | 164, 1205, 1269, 1740, 2706 |
| TscAI | CASTG | 4 cut(s) | 178, 2254, 2888, 2984 |
| TseFI | GTSAC | 2 cut(s) | 109, 3044 |
| Tsp45I | GTSAC | 2 cut(s) | 109, 3044 |
| TspGWI | ACGGA | 3 cut(s) | 2174, 2540, 3519 |
| TspRI | CASTG | 4 cut(s) | 178, 2254, 2888, 2984 |
| Vha464I | CTTAAG | 1 cut(s) | 1204 |
| VneI | GTGCAC | 1 cut(s) | 2190 |
| VpaK11BI | GGWCC | 7 cut(s) | 934, 1036, 1243, 1345, 2211, 2698, 3506 |
| XagI | CCTNNNNNAGG | 5 cut(s) | 360, 543, 729, 1326, 1380 |
| XapI | RAATTY | 6 cut(s) | 736, 1289, 1493, 1703, 2342, 2410 |
| XceI | RCATGY | 2 cut(s) | 2896, 3470 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2502 |
| XhoI | CTCGAG | 4 cut(s) | 129, 436, 619, 805 |
| XmiI | GTMKAC | 4 cut(s) | 87, 459, 642, 2899 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1900, 2560 |
| ZrmI | AGTACT | 4 cut(s) | 337, 520, 706, 892 |
| Zsp2I | ATGCAT | 2 cut(s) | 2149, 2467 |