MD07G1235500.v1.1

Probable zinc-ribbon domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0002425
Physical Location & Seq
Reverse (-)
30851428 .. 30853752
2325 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1235500.v1.1.491

Sequence Viewer

Length: 2283 bp
ATGAAGGGTCCCGATGAGTCTTCTGAAGATTGTGATCATGAACAAGTTGGAGATATAAACCTACCAAATGAAGATCAAAATAATCAGAGTGATCAAAATGATTCTCATGATTTTGATAGTGAGAAACTTGAAGTTTCCAATGAATTTTGTTCATCGACTGAGTTTGCACGTGAAGAAGTTAAGGAGAGCTCAGCTTTAGGAGAGAAAAATATGGACGTAGGCATCAACAAGGAGATTGATTCTGATTTCCAGAGCTCAAATACTGTAAATCAGGGAGATGCAAGGGGAAGTAGTTCAAATGTTGCTGCTCATACGGCCTCACGGGAAATCATTTCATCAGGTTCCTTTGAATCTTCTCGCAATGAACAACAGGTGGAACCTCGGAATAGTGTTCCCAATGGCTTTGATCATGTAAGGTCTCCTGTTGCATTTGAAAGTATAGTTACTGCTCATATGGCAGTAAGGGAAAGCGTTGCAGCGGATTCCCTGACATCTTCTCCTAATGGCCAACTGGAGGAACCTCAGAATAATGATTTTCCCAATGGCTTTGATCATGTAGGGTCTCCTGATGCATTTGAAAATACGGAGTTCTTCCCCAGCTTTGAGCTTAGCGGTGCACCTAGAGATCTGTCGAAGTCCCCAGCAAATAGAAGTCATCATGCTTATGATGCCAGTGTTTCTTCTTATGATGGCATGGATGATCAGTTCTTCAACCGAAATACACGTTCAAACATTGTTCATTCTGAAGAAAGAATCCGAAGGGATAAATTCATGGCGAATAGCATGATGACTAGAGATTCAGGATTGCAACGTCAAGCAAGGGATCCCTGGTCAAATTTTCCTGTGAAGAATGATCATGCCATGAAATACAGAAAGTGGGATCAAGATGCATTACTGCCACCTAGAAGACAAGGCCATCCAAGCCGAGATTGGAATAGATTGCAGAGTGATGAATATATGTCTAGGATGGCATTCCGTCGAAGAGTTTCCCAAGGCGGATACAAAAATAGAGGCCTCACAAATCAACTGGATAATGAGTACCAGCACAATTCAGGCTACCAATCATCTGAAATGTCTGTGGAGGCTGAACAGGACAAGAGGACACTATTAAGAATGGTTTATGAACTGCAGGATCAAGTTAACAATTTGAATGGAAAGGCGGGTGGAAGGGTTGCCAGAGGAGCCACTTGGAAGGAGAAGAGCATGGCCCAGTACCGTGATTATGAGGCATCCGAGGAGGAACTCTATCATGATCCAAACTACCAGAGGTATCTGAGAAGACACAGGGCAGGCAGCCACTATCCCCCTGAACACCACCGCAAAAACATGCGTATACCTTTCTCAAGTGAGGCAACAACCAGCAGGCACCAAGCTGATTCTTCATATTTGCATCATGAACCCCAAGACTGGCAGTGCTCAGCACCTTTGCCTCAACCCATTCGTTGCAGCAACAACGGGTTATGTATGGTTCACCCTGGTCACAGTTGCTGGACATCATATGACGAGTCTCGTCCCTTAACTCCCGAACGGTATGTGGAATCTGATTTTCCTCTTTGGGGCCGTGAAACAATGTCTGATGATCTGAGGCACCAAAGGCATGATGTGAAGAAGCTTTACAGAGAGAAACAACATTTGGCTAAGCGACATTTCCGCCCCATAGCAGGTGGAGCCCCTATCATAACTTGTTACAACTGCTCAAAACTACTGCTGATACCTGCAGATTTTCTCCTTTTCAAAAGGAGATACCATAGACTTCGATGTGGGGCTTGCTTGGAGGTGCTCAGATTTTCGCTCCAAAAGAGATCGCATATTGTCCCCTATGAACAGAATGCTATAGCCCCTCCTCCGAGTGAGGTTGGCGACTATAATGCTGCATCTAATGGCGGTAACTTGGCTCAACATGCGGATACTGTTTCATGTTCTGATGATTATGGTTACGGACCCTCTTACTACAACGGTTACTCTACTGACGGTGATCCTGGAGCTCTCGCACCCTCCAACTCTCCCCGAGGCAATTCAGAAGACCGGAATATGTCATATAGTTCATTGGATCAAATGAGACAGAGGAAGGAGCTTGTTTTGAGAGAGTCTCAGAACAAAGATAAGAATCCAATTGAAACATATGTGTCAGCAAGACCATCGTTATCCTCAGAAATCAAGGAGCTGCCAGCAAAGTCGAGTTCACCACTTCATCGACTCATGGGCTACGCTTCGCCAAGCCAAGTGATTAGAGGGTCTGGATCATCTCAGACAGGGAGAAGCTCATACCCTTTGCAGAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zinc_ribbon_12

Protein Analysis

761

Amino Acids

86.3

Weight (kDa)

6.07

Isoelectric Point (pI)

63.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zn_ribbon_12 PF11331 554 - 598 3.4e-19 EDR4 zinc-ribbon domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1652
Acc36I ACCTGC 2 cut(s) 1652, 1723
AccB1I GGYRCC 2 cut(s) 1365, 1587
AccI GTMKAC 1 cut(s) 1333
AciI CCGC 8 cut(s) 479, 612, 996, 1160, 1318, 1651, 1884, 1904
AclWI GGATC 8 cut(s) 818, 831, 888, 1140, 1247, 1970, 2058, 2248
AcoI YGGCCR 1 cut(s) 505
AcsI RAATTY 3 cut(s) 143, 767, 835
AcuI CTGAAG 2 cut(s) 45, 765
AcvI CACGTG 1 cut(s) 170
AfaI GTAC 2 cut(s) 1040, 1214
AfiI CCNNNNNNNGG 4 cut(s) 514, 1407, 1556, 1661
AflIII ACRYGT 1 cut(s) 722
AjnI CCWGG 3 cut(s) 827, 1474, 1978
AjuI GAANNNNNNNTTGG 2 cut(s) 1616, 1648
AloI GAACNNNNNNTCC 2 cut(s) 689, 721
Alw21I GWGCWC 6 cut(s) 191, 257, 619, 1418, 1782, 1987
Alw26I GTCTC 5 cut(s) 423, 567, 1512, 2053, 2094
Alw44I GTGCAC 1 cut(s) 615
AlwI GGATC 8 cut(s) 818, 831, 888, 1140, 1247, 1970, 2058, 2248
AlwNI CAGNNNCTG 1 cut(s) 1488
Ama87I CYCGRG 1 cut(s) 2007
AoxI GGCC 6 cut(s) 315, 505, 913, 1012, 1206, 1558
ApaLI GTGCAC 1 cut(s) 615
ApeKI GCWGC 6 cut(s) 305, 476, 1293, 1446, 1871, 2164
ApoI RAATTY 3 cut(s) 143, 767, 835
Asp700I GAANNNNTTC 2 cut(s) 292, 985
AspS9I GGNCC 4 cut(s) 8, 1207, 1558, 1940
AsuHPI GGTGA 3 cut(s) 1463, 1985, 2175
AvaI CYCGRG 1 cut(s) 2007
AvaII GGWCC 2 cut(s) 8, 1940
BaeGI GKGCMC 1 cut(s) 619
BalI TGGCCA 1 cut(s) 507
BamHI GGATCC 1 cut(s) 823
BanI GGYRCC 2 cut(s) 1365, 1587
BanII GRGCYC 4 cut(s) 191, 257, 1672, 1987
BarI GAAGNNNNNNTAC 2 cut(s) 1598, 1630
BbrPI CACGTG 1 cut(s) 170
BbsI GAAGAC 4 cut(s) 12, 913, 1285, 2028
Bbv12I GWGCWC 6 cut(s) 191, 257, 619, 1418, 1782, 1987
BbvI GCAGC 6 cut(s) 292, 488, 1305, 1458, 1858, 2151
BccI CCATC 4 cut(s) 683, 924, 961, 2146
BceAI ACGGC 2 cut(s) 330, 1545
BcgI CGANNNNNNTGC 4 cut(s) 1850, 1884, 2121, 2155
BciT130I CCWGG 3 cut(s) 829, 1476, 1980
BciVI GTATCC 2 cut(s) 992, 1900
BclI TGATCA 6 cut(s) 34, 91, 406, 550, 700, 853
BcoDI GTCTC 5 cut(s) 423, 567, 1512, 2053, 2094
BfaI CTAG 4 cut(s) 621, 792, 903, 963
BfmI CTRYAG 3 cut(s) 1127, 1716, 1833
BfuAI ACCTGC 2 cut(s) 1652, 1723
BfuI GTATCC 2 cut(s) 992, 1900
BglII AGATCT 1 cut(s) 625
BisI GCNGC 6 cut(s) 306, 477, 1294, 1447, 1872, 2165
BlpI GCTNAGC 4 cut(s) 190, 608, 1417, 1638
BlsI GCNGC 6 cut(s) 307, 478, 1295, 1448, 1873, 2166
Bme1390I CCNGG 3 cut(s) 829, 1476, 1980
Bme18I GGWCC 2 cut(s) 8, 1940
BmeT110I CYCGRG 1 cut(s) 2007
BmgT120I GGNCC 4 cut(s) 8, 1207, 1558, 1940
BmrFI CCNGG 3 cut(s) 829, 1476, 1980
BmrI ACTGGG 1 cut(s) 1204
BmsI GCATC 8 cut(s) 231, 268, 559, 658, 877, 1238, 1399, 1883
BmuI ACTGGG 1 cut(s) 1204
BpiI GAAGAC 4 cut(s) 12, 913, 1285, 2028
BplI GAGNNNNNCTC 2 cut(s) 2074, 2106
BpmI CTGGAG 2 cut(s) 533, 2001
Bpu1102I GCTNAGC 4 cut(s) 190, 608, 1417, 1638
BpuEI CTTGAG 1 cut(s) 1327
BsaAI YACGTR 1 cut(s) 170
BsaBI GATNNNNATC 2 cut(s) 33, 2106
BsaI GGTCTC 2 cut(s) 423, 567
BsaJI CCNNGG 6 cut(s) 380, 827, 991, 1233, 1474, 2008
BsaWI WCCGGW 1 cut(s) 2025
BsaXI ACNNNNNCTCC 2 cut(s) 481, 511
Bsc4I CCNNNNNNNGG 4 cut(s) 514, 1407, 1556, 1661
Bse1I ACTGG 5 cut(s) 516, 672, 1032, 1210, 1412
Bse3DI GCAATG 1 cut(s) 367
Bse8I GATNNNNATC 2 cut(s) 33, 2106
BseBI CCWGG 3 cut(s) 829, 1476, 1980
BseDI CCNNGG 6 cut(s) 380, 827, 991, 1233, 1474, 2008
BseGI GGATG 4 cut(s) 703, 916, 972, 1229
BseJI GATNNNNATC 2 cut(s) 33, 2106
BseLI CCNNNNNNNGG 4 cut(s) 514, 1407, 1556, 1661
BseMI GCAATG 1 cut(s) 367
BseNI ACTGG 5 cut(s) 516, 672, 1032, 1210, 1412
BseRI GAGGAG 3 cut(s) 1194, 1250, 1833
BseSI GKGCMC 1 cut(s) 619
BseXI GCAGC 6 cut(s) 292, 488, 1305, 1458, 1858, 2151
BseYI CCCAGC 2 cut(s) 596, 640
BshFI GGCC 6 cut(s) 317, 507, 915, 1014, 1208, 1560
BshNI GGYRCC 2 cut(s) 1365, 1587
BsiHKAI GWGCWC 6 cut(s) 191, 257, 619, 1418, 1782, 1987
BsiHKCI CYCGRG 1 cut(s) 2007
BsiSI CCGG 1 cut(s) 2026
BslFI GGGAC 3 cut(s) 622, 1497, 1799
BslI CCNNNNNNNGG 4 cut(s) 514, 1407, 1556, 1661
BsmAI GTCTC 5 cut(s) 423, 567, 1512, 2053, 2094
BsmFI GGGAC 3 cut(s) 622, 1497, 1799
BsmI GAATGC 2 cut(s) 971, 1834
BsnI GGCC 6 cut(s) 317, 507, 915, 1014, 1208, 1560
Bso31I GGTCTC 2 cut(s) 423, 567
BsoBI CYCGRG 1 cut(s) 2007
Bsp1286I GDGCHC 7 cut(s) 191, 257, 619, 1418, 1672, 1782, 1987
Bsp1720I GCTNAGC 4 cut(s) 190, 608, 1417, 1638
BspACI CCGC 8 cut(s) 479, 612, 996, 1160, 1318, 1651, 1884, 1904
BspANI GGCC 6 cut(s) 317, 507, 915, 1014, 1208, 1560
BspHI TCATGA 4 cut(s) 37, 106, 1249, 1393
BspMAI CTGCAG 2 cut(s) 1131, 1720
BspMI ACCTGC 2 cut(s) 1652, 1723
BspPI GGATC 8 cut(s) 818, 831, 888, 1140, 1247, 1970, 2058, 2248
BspQI GCTCTTC 1 cut(s) 1193
BspT107I GGYRCC 2 cut(s) 1365, 1587
BspTNI GGTCTC 2 cut(s) 423, 567
BsrDI GCAATG 1 cut(s) 367
BsrI ACTGG 5 cut(s) 516, 672, 1032, 1210, 1412
BssECI CCNNGG 6 cut(s) 380, 827, 991, 1233, 1474, 2008
BssNAI GTATAC 1 cut(s) 1334
BssT1I CCWWGG 1 cut(s) 991
Bst1107I GTATAC 1 cut(s) 1334
Bst2UI CCWGG 3 cut(s) 829, 1476, 1980
Bst4CI ACNGT 7 cut(s) 265, 1217, 1484, 1530, 1912, 1958, 1973
Bst6I CTCTTC 2 cut(s) 976, 1193
BstBAI YACGTR 1 cut(s) 170
BstC8I GCNNGC 4 cut(s) 1291, 1364, 1768, 2169
BstF5I GGATG 4 cut(s) 703, 916, 972, 1229
BstMAI GTCTC 5 cut(s) 423, 567, 1512, 2053, 2094
BstMWI GCNNNNNNNGC 8 cut(s) 314, 455, 668, 921, 1181, 1594, 1667, 1901
BstNI CCWGG 3 cut(s) 829, 1476, 1980
BstNSI RCATGY 2 cut(s) 1330, 1904
BstSCI CCNGG 3 cut(s) 827, 1474, 1978
BstSFI CTRYAG 3 cut(s) 1127, 1716, 1833
BstSLI GKGCMC 1 cut(s) 619
BstV1I GCAGC 6 cut(s) 292, 488, 1305, 1458, 1858, 2151
BstV2I GAAGAC 4 cut(s) 12, 913, 1285, 2028
BstX2I RGATCY 2 cut(s) 625, 823
BstYI RGATCY 2 cut(s) 625, 823
BstZ17I GTATAC 1 cut(s) 1334
BsuI GTATCC 2 cut(s) 992, 1900
BsuRI GGCC 6 cut(s) 317, 507, 915, 1014, 1208, 1560
BtsCI GGATG 4 cut(s) 703, 916, 972, 1229
BtsI GCAGTG 1 cut(s) 1418
BtsIMutI CAGTG 2 cut(s) 679, 1418
BveI ACCTGC 2 cut(s) 1652, 1723
Cac8I GCNNGC 4 cut(s) 1291, 1364, 1768, 2169
CaiI CAGNNNCTG 1 cut(s) 1488
CciI TCATGA 4 cut(s) 37, 106, 1249, 1393
Cfr13I GGNCC 4 cut(s) 8, 1207, 1558, 1940
Csp6I GTAC 2 cut(s) 1039, 1213
CviQI GTAC 2 cut(s) 1039, 1213
EaeI YGGCCR 1 cut(s) 505
Eam1104I CTCTTC 2 cut(s) 976, 1193
EarI CTCTTC 2 cut(s) 976, 1193
EciI GGCGGA 2 cut(s) 1011, 1640
Ecl136II GAGCTC 3 cut(s) 189, 255, 1985
Eco130I CCWWGG 1 cut(s) 991
Eco147I AGGCCT 1 cut(s) 1014
Eco24I GRGCYC 4 cut(s) 191, 257, 1672, 1987
Eco31I GGTCTC 2 cut(s) 423, 567
Eco47I GGWCC 2 cut(s) 8, 1940
Eco53kI GAGCTC 3 cut(s) 189, 255, 1985
Eco57I CTGAAG 2 cut(s) 45, 765
Eco72I CACGTG 1 cut(s) 170
Eco88I CYCGRG 1 cut(s) 2007
EcoICRI GAGCTC 3 cut(s) 189, 255, 1985
EcoO109I RGGNCCY 1 cut(s) 8
EcoRII CCWGG 3 cut(s) 827, 1474, 1978
EcoT14I CCWWGG 1 cut(s) 991
EcoT22I ATGCAT 2 cut(s) 574, 892
EcoT38I GRGCYC 4 cut(s) 191, 257, 1672, 1987
ErhI CCWWGG 1 cut(s) 991
FaqI GGGAC 3 cut(s) 622, 1497, 1799
FauI CCCGC 1 cut(s) 1153
FauNDI CATATG 3 cut(s) 453, 1498, 2122
FbaI TGATCA 6 cut(s) 34, 91, 406, 550, 700, 853
FblI GTMKAC 1 cut(s) 1333
Fnu4HI GCNGC 6 cut(s) 306, 477, 1294, 1447, 1872, 2165
FokI GGATG 4 cut(s) 710, 903, 979, 1216
FriOI GRGCYC 4 cut(s) 191, 257, 1672, 1987
Fsp4HI GCNGC 6 cut(s) 306, 477, 1294, 1447, 1872, 2165
FspBI CTAG 4 cut(s) 621, 792, 903, 963
GluI GCNGC 6 cut(s) 306, 477, 1294, 1447, 1872, 2165
GsaI CCCAGC 2 cut(s) 600, 644
GsuI CTGGAG 2 cut(s) 533, 2001
HaeIII GGCC 6 cut(s) 317, 507, 915, 1014, 1208, 1560
HapII CCGG 1 cut(s) 2026
HincII GTYRAC 1 cut(s) 1141
HindII GTYRAC 1 cut(s) 1141
HindIII AAGCTT 1 cut(s) 1610
HpaI GTTAAC 1 cut(s) 1141
HpaII CCGG 1 cut(s) 2026
HphI GGTGA 3 cut(s) 1463, 1985, 2175
Hpy166II GTNNAC 5 cut(s) 617, 1141, 1334, 1471, 2183
Hpy8I GTNNAC 5 cut(s) 617, 1141, 1334, 1471, 2183
Hpy99I CGWCG 1 cut(s) 981
HpyAV CCTTC 4 cut(s) 753, 1161, 1186, 2062
HpyCH4III ACNGT 7 cut(s) 265, 1217, 1484, 1530, 1912, 1958, 1973
HpyCH4IV ACGT 4 cut(s) 169, 216, 724, 811
HpyF10VI GCNNNNNNNGC 8 cut(s) 314, 455, 668, 921, 1181, 1594, 1667, 1901
HpySE526I ACGT 4 cut(s) 169, 216, 724, 811
KflI GGGWCCC 1 cut(s) 8
Ksp22I TGATCA 6 cut(s) 34, 91, 406, 550, 700, 853
KspAI GTTAAC 1 cut(s) 1141
LguI GCTCTTC 1 cut(s) 1193
LmnI GCTCC 6 cut(s) 1181, 1667, 1797, 1982, 2071, 2161
Lsp1109I GCAGC 6 cut(s) 292, 488, 1305, 1458, 1858, 2151
LweI GCATC 8 cut(s) 231, 268, 559, 658, 877, 1238, 1399, 1883
MaeI CTAG 4 cut(s) 621, 792, 903, 963
MaeII ACGT 4 cut(s) 169, 216, 724, 811
MaeIII GTNAC 6 cut(s) 442, 1478, 1685, 1886, 1934, 1958
MfeI CAATTG 1 cut(s) 2112
MflI RGATCY 2 cut(s) 625, 823
MhlI GDGCHC 7 cut(s) 191, 257, 619, 1418, 1672, 1782, 1987
MlsI TGGCCA 1 cut(s) 507
MluCI AATT 7 cut(s) 143, 767, 835, 1048, 1144, 2014, 2112
MluNI TGGCCA 1 cut(s) 507
MlyI GAGTC 4 cut(s) 26, 1514, 2096, 2190
MmeI TCCRAC 2 cut(s) 28, 2022
Mox20I TGGCCA 1 cut(s) 507
Mph1103I ATGCAT 2 cut(s) 574, 892
MroXI GAANNNNTTC 2 cut(s) 292, 985
MscI TGGCCA 1 cut(s) 507
MseI TTAA 4 cut(s) 180, 1109, 1140, 1517
MslI CAYNNNNRTG 1 cut(s) 663
Msp20I TGGCCA 1 cut(s) 507
MspA1I CMGCKG 1 cut(s) 479
MspI CCGG 1 cut(s) 2026
MspR9I CCNGG 3 cut(s) 829, 1476, 1980
MunI CAATTG 1 cut(s) 2112
Mva1269I GAATGC 2 cut(s) 971, 1834
MvaI CCWGG 3 cut(s) 829, 1476, 1980
MwoI GCNNNNNNNGC 8 cut(s) 314, 455, 668, 921, 1181, 1594, 1667, 1901
NdeI CATATG 3 cut(s) 453, 1498, 2122
NmeAIII GCCGAG 1 cut(s) 950
NmuCI GTSAC 1 cut(s) 1478
NsiI ATGCAT 2 cut(s) 574, 892
NspI RCATGY 2 cut(s) 1330, 1904
PagI TCATGA 4 cut(s) 37, 106, 1249, 1393
PaqCI CACCTGC 1 cut(s) 1652
PceI AGGCCT 1 cut(s) 1014
PciSI GCTCTTC 1 cut(s) 1193
PctI GAATGC 2 cut(s) 971, 1834
PdmI GAANNNNTTC 2 cut(s) 292, 985
PfeI GAWTC 9 cut(s) 101, 239, 350, 482, 753, 797, 1376, 1538, 2107
PfoI TCCNGGA 1 cut(s) 1978
PkrI GCNGC 6 cut(s) 307, 478, 1295, 1448, 1873, 2166
PleI GAGTC 4 cut(s) 25, 1513, 2095, 2190
PmaCI CACGTG 1 cut(s) 170
PmlI CACGTG 1 cut(s) 170
PpsI GAGTC 4 cut(s) 25, 1513, 2095, 2190
Ppu21I YACGTR 1 cut(s) 170
PpuMI RGGWCCY 1 cut(s) 8
Psp124BI GAGCTC 3 cut(s) 191, 257, 1987
Psp5II RGGWCCY 1 cut(s) 8
Psp6I CCWGG 3 cut(s) 827, 1474, 1978
PspCI CACGTG 1 cut(s) 170
PspFI CCCAGC 2 cut(s) 596, 640
PspGI CCWGG 3 cut(s) 827, 1474, 1978
PspPI GGNCC 4 cut(s) 8, 1207, 1558, 1940
PspPPI RGGWCCY 1 cut(s) 8
PstI CTGCAG 2 cut(s) 1131, 1720
PstNI CAGNNNCTG 1 cut(s) 1488
PsuI RGATCY 2 cut(s) 625, 823
RsaI GTAC 2 cut(s) 1040, 1214
RsaNI GTAC 2 cut(s) 1039, 1213
RseI CAYNNNNRTG 1 cut(s) 663
SacI GAGCTC 3 cut(s) 191, 257, 1987
SapI GCTCTTC 1 cut(s) 1193
SaqAI TTAA 4 cut(s) 180, 1109, 1140, 1517
SatI GCNGC 6 cut(s) 306, 477, 1294, 1447, 1872, 2165
Sau96I GGNCC 4 cut(s) 8, 1207, 1558, 1940
SchI GAGTC 4 cut(s) 26, 1514, 2096, 2190
ScrFI CCNGG 3 cut(s) 829, 1476, 1980
SduI GDGCHC 7 cut(s) 191, 257, 619, 1418, 1672, 1782, 1987
SfaNI GCATC 8 cut(s) 231, 268, 559, 658, 877, 1238, 1399, 1883
SfcI CTRYAG 3 cut(s) 1127, 1716, 1833
SinI GGWCC 2 cut(s) 8, 1940
SmiMI CAYNNNNRTG 1 cut(s) 663
SmlI CTYRAG 1 cut(s) 1342
SmoI CTYRAG 1 cut(s) 1342
Sse9I AATT 7 cut(s) 143, 767, 835, 1048, 1144, 2014, 2112
SseBI AGGCCT 1 cut(s) 1014
SsiI CCGC 8 cut(s) 479, 612, 996, 1160, 1318, 1651, 1884, 1904
SspMI CTAG 4 cut(s) 621, 792, 903, 963
SstI GAGCTC 3 cut(s) 191, 257, 1987
StuI AGGCCT 1 cut(s) 1014
StyD4I CCNGG 3 cut(s) 827, 1474, 1978
StyI CCWWGG 1 cut(s) 991
TaaI ACNGT 7 cut(s) 265, 1217, 1484, 1530, 1912, 1958, 1973
TaiI ACGT 4 cut(s) 172, 219, 727, 814
TaqI TCGA 6 cut(s) 155, 632, 979, 1756, 2177, 2194
TasI AATT 7 cut(s) 143, 767, 835, 1048, 1144, 2014, 2112
TfiI GAWTC 9 cut(s) 101, 239, 350, 482, 753, 797, 1376, 1538, 2107
Tru1I TTAA 4 cut(s) 180, 1109, 1140, 1517
Tru9I TTAA 4 cut(s) 180, 1109, 1140, 1517
TscAI CASTG 2 cut(s) 679, 1418
TseFI GTSAC 1 cut(s) 1478
TseI GCWGC 6 cut(s) 305, 476, 1293, 1446, 1871, 2164
Tsp45I GTSAC 1 cut(s) 1478
TspGWI ACGGA 3 cut(s) 599, 965, 1953
TspRI CASTG 2 cut(s) 679, 1418
VneI GTGCAC 1 cut(s) 615
VpaK11BI GGWCC 2 cut(s) 8, 1940
XapI RAATTY 3 cut(s) 143, 767, 835
XceI RCATGY 2 cut(s) 1330, 1904
XcmI CCANNNNNNNNNTGG 1 cut(s) 927
XmiI GTMKAC 1 cut(s) 1333
XmnI GAANNNNTTC 2 cut(s) 292, 985
XspI CTAG 4 cut(s) 621, 792, 903, 963
Zsp2I ATGCAT 2 cut(s) 574, 892
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.