Probable zinc-ribbon domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G05190 |
| fragaria_vesca | FvH4_7g26160 |
| malus_domestica | MD01G1169800.v1.1 MD01G1169900.v1.1 MD07G1235500.v1.1 |
| prunus_persica | Prupe.2G265800_v2.0.a1 Prupe.2G265800_v2.0.a1 Prupe.2G265800_v2.0.a1 Prupe.4G213000_v2.0.a1 Prupe.4G213000_v2.0.a1 Prupe.4G213000_v2.0.a1 Prupe.4G213000_v2.0.a1 Prupe.4G213000_v2.0.a1 |
| pyrus_communis | pycom01g18250 pycom01g18260 pycom07g21310 |
| rosa_chinensis | RchiOBHm_Chr1g0372591 RchiOBHm_Chr4g0399021 RchiOBHm_Chr5g0049731 RchiOBHm_Chr7g0243711 |
| rosa_laevigata | RLG00000001030 RLG00000008808 RLG00000010509 RLG00000026888 |
| rosa_multiflora | Rmu_ssc0000419.1_g000010 |
| rosa_roxburghii | Rroxscaffold_7G00208520 |
| rosa_rugosa | Rorug01G0066000 Rorug01G0373300 |
| rosa_samantha | Rh1AG381600 Rh1BG345000 Rh1CG358400 Rh1DG376200 Rh2BG091800 Rh3DG186100 Rh4DG129900 Rh5AG465400 Rh7AG476000 |
| rosa_wichuraiana | Rw0G018150 Rw1G033560 Rw2G022780 Rw7G041610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3018 |
| AarI | CACCTGC | 1 cut(s) | 2981 |
| Acc16I | TGCGCA | 1 cut(s) | 1776 |
| Acc36I | ACCTGC | 3 cut(s) | 1616, 2981, 3052 |
| AccB1I | GGYRCC | 5 cut(s) | 4, 107, 2290, 3343, 3517 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1412 |
| AccI | GTMKAC | 1 cut(s) | 87 |
| AccII | CGCG | 2 cut(s) | 2533, 2542 |
| AccIII | TCCGGA | 1 cut(s) | 787 |
| AciI | CCGC | 8 cut(s) | 2531, 2540, 2542, 2636, 2647, 2980, 3032, 3201 |
| AcsI | RAATTY | 5 cut(s) | 77, 572, 1346, 2090, 2651 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 3 cut(s) | 811, 1729, 2363 |
| AflII | CTTAAG | 1 cut(s) | 3110 |
| AflIII | ACRYGT | 1 cut(s) | 3384 |
| AjnI | CCWGG | 3 cut(s) | 2094, 2150, 3331 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2945, 2977, 3517, 3549 |
| Alw21I | GWGCWC | 4 cut(s) | 158, 1724, 1942, 2747 |
| Alw26I | GTCTC | 4 cut(s) | 164, 1890, 3410, 3447 |
| Alw44I | GTGCAC | 1 cut(s) | 1938 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2817 |
| Ama87I | CYCGRG | 5 cut(s) | 259, 361, 565, 949, 1282 |
| Aor13HI | TCCGGA | 1 cut(s) | 787 |
| AoxI | GGCC | 4 cut(s) | 994, 2236, 2335, 2887 |
| ApaLI | GTGCAC | 1 cut(s) | 1938 |
| ApoI | RAATTY | 5 cut(s) | 77, 572, 1346, 2090, 2651 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1331, 1363 |
| AseI | ATTAAT | 1 cut(s) | 2216 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 511, 715, 783, 1759, 2308, 2577 |
| AspLEI | GCGC | 3 cut(s) | 7, 318, 1777 |
| AspS9I | GGNCC | 6 cut(s) | 790, 994, 2336, 2726, 2797, 2887 |
| AsuHPI | GGTGA | 2 cut(s) | 3338, 3528 |
| AvaI | CYCGRG | 5 cut(s) | 259, 361, 565, 949, 1282 |
| AvaII | GGWCC | 3 cut(s) | 790, 2726, 2797 |
| AxyI | CCTNAGG | 3 cut(s) | 957, 1161, 1263 |
| BaeGI | GKGCMC | 1 cut(s) | 1942 |
| BamHI | GGATCC | 2 cut(s) | 3259, 3403 |
| BanI | GGYRCC | 5 cut(s) | 4, 107, 2290, 3343, 3517 |
| BanII | GRGCYC | 4 cut(s) | 158, 1724, 3001, 3297 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3208, 3240 |
| BauI | CACGAG | 2 cut(s) | 1518, 1620 |
| BbsI | GAAGAC | 7 cut(s) | 1221, 1323, 1344, 1425, 2236, 2311, 2617 |
| Bbv12I | GWGCWC | 4 cut(s) | 158, 1724, 1942, 2747 |
| BccI | CCATC | 6 cut(s) | 1743, 1985, 1986, 2006, 2247, 3317 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 849, 883 |
| BciT130I | CCWGG | 3 cut(s) | 2096, 2152, 3333 |
| BciVI | GTATCC | 2 cut(s) | 1431, 3471 |
| BclI | TGATCA | 2 cut(s) | 1447, 1873 |
| BcoDI | GTCTC | 4 cut(s) | 164, 1890, 3410, 3447 |
| BfmI | CTRYAG | 6 cut(s) | 2340, 2450, 2548, 3035, 3045, 3162 |
| BfoI | RGCGCY | 1 cut(s) | 8 |
| BfrI | CTTAAG | 1 cut(s) | 3110 |
| BfuAI | ACCTGC | 3 cut(s) | 1616, 2981, 3052 |
| BfuI | GTATCC | 2 cut(s) | 1431, 3471 |
| BglII | AGATCT | 2 cut(s) | 1817, 3131 |
| BlpI | GCTNAGC | 2 cut(s) | 2746, 2967 |
| BmcAI | AGTACT | 1 cut(s) | 1729 |
| Bme1390I | CCNGG | 3 cut(s) | 2096, 2152, 3333 |
| Bme18I | GGWCC | 3 cut(s) | 790, 2726, 2797 |
| BmeT110I | CYCGRG | 5 cut(s) | 259, 361, 565, 949, 1282 |
| BmgT120I | GGNCC | 6 cut(s) | 790, 994, 2336, 2726, 2797, 2887 |
| BmrFI | CCNGG | 3 cut(s) | 2096, 2152, 3333 |
| BmsI | GCATC | 5 cut(s) | 1456, 1698, 2570, 2728, 3062 |
| BpiI | GAAGAC | 7 cut(s) | 1221, 1323, 1344, 1425, 2236, 2311, 2617 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3574, 3606 |
| BpmI | CTGGAG | 3 cut(s) | 231, 1859, 2656 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2746, 2967 |
| BsaBI | GATNNNNATC | 3 cut(s) | 3258, 3327, 3459 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 6 cut(s) | 753, 2314, 2400, 2540, 3361, 3407 |
| BsaWI | WCCGGW | 2 cut(s) | 585, 787 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 357, 387, 561, 591, 1711, 1741 |
| Bse118I | RCCGGY | 1 cut(s) | 51 |
| Bse1I | ACTGG | 4 cut(s) | 201, 1842, 2673, 2741 |
| Bse21I | CCTNAGG | 3 cut(s) | 957, 1161, 1263 |
| Bse3DI | GCAATG | 4 cut(s) | 907, 1144, 1246, 2753 |
| Bse8I | GATNNNNATC | 3 cut(s) | 3258, 3327, 3459 |
| BseAI | TCCGGA | 1 cut(s) | 787 |
| BseBI | CCWGG | 3 cut(s) | 2096, 2152, 3333 |
| BseDI | CCNNGG | 6 cut(s) | 753, 2314, 2400, 2540, 3361, 3407 |
| BseGI | GGATG | 5 cut(s) | 107, 1735, 2026, 2209, 2239 |
| BseJI | GATNNNNATC | 3 cut(s) | 3258, 3327, 3459 |
| BseMI | GCAATG | 4 cut(s) | 907, 1144, 1246, 2753 |
| BseNI | ACTGG | 4 cut(s) | 201, 1842, 2673, 2741 |
| BseRI | GAGGAG | 3 cut(s) | 2517, 3527, 3553 |
| BseSI | GKGCMC | 1 cut(s) | 1942 |
| BseYI | CCCAGC | 3 cut(s) | 1919, 1963, 2640 |
| Bsh1236I | CGCG | 2 cut(s) | 2533, 2542 |
| BshFI | GGCC | 4 cut(s) | 996, 2238, 2337, 2889 |
| BshNI | GGYRCC | 5 cut(s) | 4, 107, 2290, 3343, 3517 |
| BsiHKAI | GWGCWC | 4 cut(s) | 158, 1724, 1942, 2747 |
| BsiHKCI | CYCGRG | 5 cut(s) | 259, 361, 565, 949, 1282 |
| BsiSI | CCGG | 4 cut(s) | 52, 586, 788, 2499 |
| BslFI | GGGAC | 6 cut(s) | 1945, 2712, 2835, 3128, 3203, 3622 |
| BsmAI | GTCTC | 4 cut(s) | 164, 1890, 3410, 3447 |
| BsmFI | GGGAC | 6 cut(s) | 1945, 2712, 2835, 3128, 3203, 3622 |
| BsmI | GAATGC | 9 cut(s) | 272, 374, 607, 785, 887, 989, 1091, 1295, 3163 |
| BsnI | GGCC | 4 cut(s) | 996, 2238, 2337, 2889 |
| BsoBI | CYCGRG | 5 cut(s) | 259, 361, 565, 949, 1282 |
| Bsp1286I | GDGCHC | 6 cut(s) | 158, 1724, 1942, 2747, 3001, 3297 |
| Bsp13I | TCCGGA | 1 cut(s) | 787 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2746, 2967 |
| BspACI | CCGC | 8 cut(s) | 2531, 2540, 2542, 2636, 2647, 2980, 3032, 3201 |
| BspANI | GGCC | 4 cut(s) | 996, 2238, 2337, 2889 |
| BspEI | TCCGGA | 1 cut(s) | 787 |
| BspFNI | CGCG | 2 cut(s) | 2533, 2542 |
| BspHI | TCATGA | 2 cut(s) | 2353, 2581 |
| BspMAI | CTGCAG | 4 cut(s) | 2454, 2552, 3039, 3049 |
| BspMI | ACCTGC | 3 cut(s) | 1616, 2981, 3052 |
| BspQI | GCTCTTC | 3 cut(s) | 277, 892, 1096 |
| BspT107I | GGYRCC | 5 cut(s) | 4, 107, 2290, 3343, 3517 |
| BspTI | CTTAAG | 1 cut(s) | 3110 |
| BsrDI | GCAATG | 4 cut(s) | 907, 1144, 1246, 2753 |
| BsrFI | RCCGGY | 1 cut(s) | 51 |
| BsrI | ACTGG | 4 cut(s) | 201, 1842, 2673, 2741 |
| BssAI | RCCGGY | 1 cut(s) | 51 |
| BssECI | CCNNGG | 6 cut(s) | 753, 2314, 2400, 2540, 3361, 3407 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssSI | CACGAG | 2 cut(s) | 1518, 1620 |
| BssT1I | CCWWGG | 3 cut(s) | 753, 2314, 3407 |
| Bst2BI | CACGAG | 2 cut(s) | 1518, 1620 |
| Bst2UI | CCWGG | 3 cut(s) | 2096, 2152, 3333 |
| Bst4CI | ACNGT | 9 cut(s) | 230, 338, 1445, 1732, 2430, 2813, 2859, 3441, 3492 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAFI | CTTAAG | 1 cut(s) | 3110 |
| BstC8I | GCNNGC | 3 cut(s) | 53, 1584, 1785 |
| BstDSI | CCRYGG | 2 cut(s) | 2400, 2540 |
| BstF5I | GGATG | 5 cut(s) | 107, 1735, 2026, 2209, 2239 |
| BstFNI | CGCG | 2 cut(s) | 2533, 2542 |
| BstH2I | RGCGCY | 1 cut(s) | 8 |
| BstHHI | GCGC | 3 cut(s) | 7, 318, 1777 |
| BstMAI | GTCTC | 4 cut(s) | 164, 1890, 3410, 3447 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 993, 1631, 2376, 2504, 2539, 2923, 2996 |
| BstNI | CCWGG | 3 cut(s) | 2096, 2152, 3333 |
| BstNSI | RCATGY | 2 cut(s) | 1586, 3388 |
| BstSCI | CCNGG | 3 cut(s) | 2094, 2150, 3331 |
| BstSFI | CTRYAG | 6 cut(s) | 2340, 2450, 2548, 3035, 3045, 3162 |
| BstSLI | GKGCMC | 1 cut(s) | 1942 |
| BstUI | CGCG | 2 cut(s) | 2533, 2542 |
| BstV2I | GAAGAC | 7 cut(s) | 1221, 1323, 1344, 1425, 2236, 2311, 2617 |
| BstX2I | RGATCY | 4 cut(s) | 1817, 3131, 3259, 3403 |
| BstYI | RGATCY | 4 cut(s) | 1817, 3131, 3259, 3403 |
| Bsu36I | CCTNAGG | 3 cut(s) | 957, 1161, 1263 |
| BsuI | GTATCC | 2 cut(s) | 1431, 3471 |
| BsuRI | GGCC | 4 cut(s) | 996, 2238, 2337, 2889 |
| BtgI | CCRYGG | 2 cut(s) | 2400, 2540 |
| BtsCI | GGATG | 5 cut(s) | 107, 1735, 2026, 2209, 2239 |
| BtsI | GCAGTG | 4 cut(s) | 247, 2002, 2545, 2747 |
| BtsIMutI | CAGTG | 7 cut(s) | 247, 343, 2002, 2426, 2545, 2680, 2747 |
| BveI | ACCTGC | 3 cut(s) | 1616, 2981, 3052 |
| Cac8I | GCNNGC | 3 cut(s) | 53, 1584, 1785 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2817 |
| CciI | TCATGA | 2 cut(s) | 2353, 2581 |
| CfoI | GCGC | 3 cut(s) | 7, 318, 1777 |
| Cfr10I | RCCGGY | 1 cut(s) | 51 |
| Cfr13I | GGNCC | 6 cut(s) | 790, 994, 2336, 2726, 2797, 2887 |
| Cfr42I | CCGCGG | 1 cut(s) | 2543 |
| Csp6I | GTAC | 3 cut(s) | 810, 1728, 2362 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 79, 114 |
| CviQI | GTAC | 3 cut(s) | 810, 1728, 2362 |
| DinI | GGCGCC | 1 cut(s) | 6 |
| EciI | GGCGGA | 2 cut(s) | 2625, 2969 |
| Ecl136II | GAGCTC | 2 cut(s) | 156, 1722 |
| Eco130I | CCWWGG | 3 cut(s) | 753, 2314, 3407 |
| Eco24I | GRGCYC | 4 cut(s) | 158, 1724, 3001, 3297 |
| Eco47I | GGWCC | 3 cut(s) | 790, 2726, 2797 |
| Eco53kI | GAGCTC | 2 cut(s) | 156, 1722 |
| Eco81I | CCTNAGG | 3 cut(s) | 957, 1161, 1263 |
| Eco88I | CYCGRG | 5 cut(s) | 259, 361, 565, 949, 1282 |
| EcoICRI | GAGCTC | 2 cut(s) | 156, 1722 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2336 |
| EcoRI | GAATTC | 1 cut(s) | 572 |
| EcoRII | CCWGG | 3 cut(s) | 2094, 2150, 3331 |
| EcoT14I | CCWWGG | 3 cut(s) | 753, 2314, 3407 |
| EcoT22I | ATGCAT | 1 cut(s) | 2661 |
| EcoT38I | GRGCYC | 4 cut(s) | 158, 1724, 3001, 3297 |
| EgeI | GGCGCC | 1 cut(s) | 6 |
| EheI | GGCGCC | 1 cut(s) | 6 |
| ErhI | CCWWGG | 3 cut(s) | 753, 2314, 3407 |
| FaqI | GGGAC | 6 cut(s) | 1945, 2712, 2835, 3128, 3203, 3622 |
| FauNDI | CATATG | 2 cut(s) | 1779, 3148 |
| FbaI | TGATCA | 2 cut(s) | 1447, 1873 |
| FblI | GTMKAC | 1 cut(s) | 87 |
| FokI | GGATG | 5 cut(s) | 114, 1722, 2033, 2216, 2226 |
| FriOI | GRGCYC | 4 cut(s) | 158, 1724, 3001, 3297 |
| FspI | TGCGCA | 1 cut(s) | 1776 |
| GlaI | GCGC | 3 cut(s) | 6, 317, 1776 |
| GsaI | CCCAGC | 3 cut(s) | 1923, 1967, 2644 |
| GsuI | CTGGAG | 3 cut(s) | 231, 1859, 2656 |
| HaeII | RGCGCY | 1 cut(s) | 8 |
| HaeIII | GGCC | 4 cut(s) | 996, 2238, 2337, 2889 |
| HapII | CCGG | 4 cut(s) | 52, 586, 788, 2499 |
| HhaI | GCGC | 3 cut(s) | 7, 318, 1777 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin6I | GCGC | 3 cut(s) | 5, 316, 1775 |
| HinP1I | GCGC | 3 cut(s) | 5, 316, 1775 |
| HincII | GTYRAC | 2 cut(s) | 2464, 3531 |
| HindII | GTYRAC | 2 cut(s) | 2464, 3531 |
| HpaI | GTTAAC | 1 cut(s) | 2464 |
| HpaII | CCGG | 4 cut(s) | 52, 586, 788, 2499 |
| HphI | GGTGA | 2 cut(s) | 3338, 3528 |
| Hpy166II | GTNNAC | 5 cut(s) | 88, 1940, 2464, 2800, 3531 |
| Hpy8I | GTNNAC | 5 cut(s) | 88, 1940, 2464, 2800, 3531 |
| Hpy99I | CGWCG | 2 cut(s) | 527, 731 |
| HpyAV | CCTTC | 8 cut(s) | 512, 716, 821, 1127, 1229, 2076, 2484, 2509 |
| HpyCH4III | ACNGT | 9 cut(s) | 230, 338, 1445, 1732, 2430, 2813, 2859, 3441, 3492 |
| HpyCH4IV | ACGT | 3 cut(s) | 204, 1430, 2047 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 993, 1631, 2376, 2504, 2539, 2923, 2996 |
| HpySE526I | ACGT | 3 cut(s) | 204, 1430, 2047 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| HspAI | GCGC | 3 cut(s) | 5, 316, 1775 |
| KasI | GGCGCC | 1 cut(s) | 4 |
| Kpn2I | TCCGGA | 1 cut(s) | 787 |
| KroI | GCCGGC | 1 cut(s) | 51 |
| KroNI | GCCGGC | 1 cut(s) | 53 |
| Ksp22I | TGATCA | 2 cut(s) | 1447, 1873 |
| KspAI | GTTAAC | 1 cut(s) | 2464 |
| KspI | CCGCGG | 1 cut(s) | 2543 |
| LguI | GCTCTTC | 3 cut(s) | 277, 892, 1096 |
| LmnI | GCTCC | 6 cut(s) | 1300, 1719, 2405, 2504, 2996, 3424 |
| LweI | GCATC | 5 cut(s) | 1456, 1698, 2570, 2728, 3062 |
| MaeII | ACGT | 3 cut(s) | 204, 1430, 2047 |
| MaeIII | GTNAC | 6 cut(s) | 448, 652, 1768, 3215, 3387, 3557 |
| MflI | RGATCY | 4 cut(s) | 1817, 3131, 3259, 3403 |
| MhlI | GDGCHC | 6 cut(s) | 158, 1724, 1942, 2747, 3001, 3297 |
| Mly113I | GGCGCC | 1 cut(s) | 5 |
| MmeI | TCCRAC | 2 cut(s) | 249, 1430 |
| Mph1103I | ATGCAT | 1 cut(s) | 2661 |
| MroI | TCCGGA | 1 cut(s) | 787 |
| MroNI | GCCGGC | 1 cut(s) | 51 |
| MroXI | GAANNNNTTC | 6 cut(s) | 511, 715, 783, 1759, 2308, 2577 |
| MseI | TTAA | 5 cut(s) | 1256, 1599, 2216, 2463, 3111 |
| MslI | CAYNNNNRTG | 2 cut(s) | 285, 1986 |
| MspA1I | CMGCKG | 3 cut(s) | 2542, 3034, 3203 |
| MspCI | CTTAAG | 1 cut(s) | 3110 |
| MspI | CCGG | 4 cut(s) | 52, 586, 788, 2499 |
| MspR9I | CCNGG | 3 cut(s) | 2096, 2152, 3333 |
| Mva1269I | GAATGC | 9 cut(s) | 272, 374, 607, 785, 887, 989, 1091, 1295, 3163 |
| MvaI | CCWGG | 3 cut(s) | 2096, 2152, 3333 |
| MvnI | CGCG | 2 cut(s) | 2533, 2542 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 993, 1631, 2376, 2504, 2539, 2923, 2996 |
| NaeI | GCCGGC | 1 cut(s) | 53 |
| NarI | GGCGCC | 1 cut(s) | 5 |
| NdeI | CATATG | 2 cut(s) | 1779, 3148 |
| NgoMIV | GCCGGC | 1 cut(s) | 51 |
| NmuCI | GTSAC | 1 cut(s) | 3387 |
| NsbI | TGCGCA | 1 cut(s) | 1776 |
| NsiI | ATGCAT | 1 cut(s) | 2661 |
| NspI | RCATGY | 2 cut(s) | 1586, 3388 |
| PaeI | GCATGC | 1 cut(s) | 1586 |
| PaeR7I | CTCGAG | 1 cut(s) | 949 |
| PagI | TCATGA | 2 cut(s) | 2353, 2581 |
| PaqCI | CACCTGC | 1 cut(s) | 2981 |
| PciI | ACATGT | 1 cut(s) | 3384 |
| PciSI | GCTCTTC | 3 cut(s) | 277, 892, 1096 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2530 |
| PctI | GAATGC | 9 cut(s) | 272, 374, 607, 785, 887, 989, 1091, 1295, 3163 |
| PdiI | GCCGGC | 1 cut(s) | 53 |
| PdmI | GAANNNNTTC | 6 cut(s) | 511, 715, 783, 1759, 2308, 2577 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1412 |
| PfoI | TCCNGGA | 1 cut(s) | 3331 |
| PluTI | GGCGCC | 1 cut(s) | 8 |
| PscI | ACATGT | 1 cut(s) | 3384 |
| PshBI | ATTAAT | 1 cut(s) | 2216 |
| PsiI | TTATAA | 1 cut(s) | 3018 |
| Psp124BI | GAGCTC | 2 cut(s) | 158, 1724 |
| Psp6I | CCWGG | 3 cut(s) | 2094, 2150, 3331 |
| PspFI | CCCAGC | 3 cut(s) | 1919, 1963, 2640 |
| PspGI | CCWGG | 3 cut(s) | 2094, 2150, 3331 |
| PspPI | GGNCC | 6 cut(s) | 790, 994, 2336, 2726, 2797, 2887 |
| PspXI | VCTCGAGB | 1 cut(s) | 949 |
| PstI | CTGCAG | 4 cut(s) | 2454, 2552, 3039, 3049 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2817 |
| PsuI | RGATCY | 4 cut(s) | 1817, 3131, 3259, 3403 |
| RsaI | GTAC | 3 cut(s) | 811, 1729, 2363 |
| RsaNI | GTAC | 3 cut(s) | 810, 1728, 2362 |
| RseI | CAYNNNNRTG | 2 cut(s) | 285, 1986 |
| SacI | GAGCTC | 2 cut(s) | 158, 1724 |
| SacII | CCGCGG | 1 cut(s) | 2543 |
| SapI | GCTCTTC | 3 cut(s) | 277, 892, 1096 |
| SaqAI | TTAA | 5 cut(s) | 1256, 1599, 2216, 2463, 3111 |
| Sau96I | GGNCC | 6 cut(s) | 790, 994, 2336, 2726, 2797, 2887 |
| ScaI | AGTACT | 1 cut(s) | 1729 |
| ScrFI | CCNGG | 3 cut(s) | 2096, 2152, 3333 |
| SduI | GDGCHC | 6 cut(s) | 158, 1724, 1942, 2747, 3001, 3297 |
| SfaNI | GCATC | 5 cut(s) | 1456, 1698, 2570, 2728, 3062 |
| SfcI | CTRYAG | 6 cut(s) | 2340, 2450, 2548, 3035, 3045, 3162 |
| SfoI | GGCGCC | 1 cut(s) | 6 |
| Sfr274I | CTCGAG | 1 cut(s) | 949 |
| Sfr303I | CCGCGG | 1 cut(s) | 2543 |
| SgrBI | CCGCGG | 1 cut(s) | 2543 |
| SinI | GGWCC | 3 cut(s) | 790, 2726, 2797 |
| SlaI | CTCGAG | 1 cut(s) | 949 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 285, 1986 |
| SphI | GCATGC | 1 cut(s) | 1586 |
| SsiI | CCGC | 8 cut(s) | 2531, 2540, 2542, 2636, 2647, 2980, 3032, 3201 |
| SspDI | GGCGCC | 1 cut(s) | 4 |
| SstI | GAGCTC | 2 cut(s) | 158, 1724 |
| StyD4I | CCNGG | 3 cut(s) | 2094, 2150, 3331 |
| StyI | CCWWGG | 3 cut(s) | 753, 2314, 3407 |
| TaaI | ACNGT | 9 cut(s) | 230, 338, 1445, 1732, 2430, 2813, 2859, 3441, 3492 |
| TaiI | ACGT | 3 cut(s) | 207, 1433, 2050 |
| TaqI | TCGA | 6 cut(s) | 28, 164, 950, 2248, 3547, 3592 |
| TaqII | GACCGA | 1 cut(s) | 396 |
| TatI | WGTACW | 2 cut(s) | 809, 1727 |
| TauI | GCSGC | 1 cut(s) | 2545 |
| Tru1I | TTAA | 5 cut(s) | 1256, 1599, 2216, 2463, 3111 |
| Tru9I | TTAA | 5 cut(s) | 1256, 1599, 2216, 2463, 3111 |
| TscAI | CASTG | 7 cut(s) | 247, 343, 2002, 2433, 2552, 2680, 2747 |
| TseFI | GTSAC | 1 cut(s) | 3387 |
| Tsp45I | GTSAC | 1 cut(s) | 3387 |
| TspGWI | ACGGA | 3 cut(s) | 2051, 2389, 3272 |
| TspRI | CASTG | 7 cut(s) | 247, 343, 2002, 2433, 2552, 2680, 2747 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1412 |
| Vha464I | CTTAAG | 1 cut(s) | 3110 |
| VneI | GTGCAC | 1 cut(s) | 1938 |
| VpaK11BI | GGWCC | 3 cut(s) | 790, 2726, 2797 |
| VspI | ATTAAT | 1 cut(s) | 2216 |
| XapI | RAATTY | 5 cut(s) | 77, 572, 1346, 2090, 2651 |
| XceI | RCATGY | 2 cut(s) | 1586, 3388 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2250 |
| XhoI | CTCGAG | 1 cut(s) | 949 |
| XmiI | GTMKAC | 1 cut(s) | 87 |
| XmnI | GAANNNNTTC | 6 cut(s) | 511, 715, 783, 1759, 2308, 2577 |
| ZrmI | AGTACT | 1 cut(s) | 1729 |
| Zsp2I | ATGCAT | 1 cut(s) | 2661 |