Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0001358

Physical Location & Seq

Genomic Coordinates Reverse (-)

25331900 .. 25336010

Gene Structure 4111 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1162200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1473 bp

ATGGCCGGCATTACTAATGCTTATAGTGAAATAACCCCGGCGGTTCCGTTGTGGCTAAACAAAGGTGACAACGCATGGCAACTCACAGCGGCCACTTTTGTAGGGTTGCAAAGCATGCCGGGCCTAGTGATCCTTTACGCCAGCATAGTCAAGAAGAAATGGGCAGTAAACTCAGCCTTCATGGCCCTCTACGCCTTCGCCGCCGTGCTCATCTGTTGGGTCCTCGTAGGCTACCGTATGGCCTTCGGGGACCAGCTCCTCCCGTTTTGGGCTAAAGGTGCACCCTCTCTAGGTCAAAAGTTCCTCATCAGCCGAGCCAAAGTGCCCAAAAGTACTCACTTTCGTGACGATGGATCGATTGAGACTCAAACGGTTGAGCCATTTTACCCAATGGCATCACTCGTCTACTTTCAGTTCACTTTTGCAGCTATTACTCTTATTTTGTTAGCGGGGTCTGTTCTTGGCCGCATGAACATCAAGGCTTGGATGGCTTTTGTCCCTCTTTGGCTTCTATTTTCATACACTGTTGGAGCCTTTAGTCTTTGGGGTGGTGGCTTCCTCTATCATTGGGGTGTAATTGACTACTCCGGTGGTTATGTCATCCATCTCTCCTCGGGCATCGCAGGTTTCACCGCCGCTTATTGGGTTGGTCCAAGGTTGAAGAGTGACAGGGAGAGGTTTCCACCAAACAACGTGTTGCTAATGCTTTGTGGTGCTGGGATGCTGTGGATGGGCTGGTCAGGTTTCAACGGCGGGGCCCCTTATGCTGCAAACATTGTTGCTCCAATAGCAGTGTTGAACACAAACATCTGTGCAGCCACCAGCCTTCTTGTATGGACGTCTCTCGACGTTGTGTTCTTCGGCAAGCCGTCGGTGATCGGAGCTGTTCAGGGCATGATGACGGGGCTCGTATGCATCACACCTGGGGCGGGGTTGGTGCAGTCGTGGGCAGCTATTCTGATGGGAATGCTTTCTGGTAGCATTCCATGGGTCTCCATGATGGTCCTACACAAAAAGTCTGCCCTATTGCAAAAGGTGGATGACACCCTAGGGGTATTTCATACACATGCAGTGGCAGGGCTTTTAGGAGGACTGCTGACTGGGCTTCTGGCAGAGCCAGCACTTTGCAGGCTTATGCTGCCTGTTGGCAACAGCAGAGGTGCATTCTACGGTGGCAGTGGAGGGATGCAATTTCTGAAACAATTGGTTGCAGCCATGTTTGTGATTGCTTGGAACATAGTCTCCACCACTATCATACTTCTGGCAATTAGGGTTTTCATACCTCTGAGAATGCCGGAGGAGCAGCTTATCATTGGAGATGACGCTGTTCACGGAGAAGAGGCTTATGCTCTTTGGGGTGACGGAGAAAAATATGACCCGACAAGACATGGTTGGAATACATCGGCGTATGGTGAAGAAATGGCACCGTCGCCGTATATCAATGGTGCCAGAGGTGTGACCATTAACTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008519 GO:0009506 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015291 GO:0015398 GO:0015696 GO:0016020 GO:0022804 GO:0022857 GO:0030054 GO:0034220 GO:0043207 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055044 GO:0055085 GO:0071705 GO:0071944 GO:0072488 GO:0098655

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ammonium_transp

Protein Analysis

491

Amino Acids

52.86

Weight (kDa)

8.66

Isoelectric Point (pI)

36.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ammonium_transp	PF00909	25 - 449	7.6e-79	Ammonium Transporter Family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38290 AT2G38290
fragaria_vesca	FvH4_1g25720 FvH4_6g11040
malus_domestica	MD04G1162200.v1.1 MD12G1174700.v1.1 MD15G1139800.v1.1
prunus_persica	Prupe.4G283900_v2.0.a1 Prupe.4G285000_v2.0.a1 Prupe.4G285300_v2.0.a1 Prupe.4G285400_v2.0.a1 Prupe.6G281900_v2.0.a1
pyrus_communis	pycom04g14520 pycom15g12630
rosa_chinensis	RchiOBHm_Chr3g0462351 RchiOBHm_Chr3g0484601 RchiOBHm_Chr3g0484621 RchiOBHm_Chr3g0484631 RchiOBHm_Chr3g0484641
rosa_laevigata	RLG00000023210 RLG00000023213 RLG00000024864
rosa_multiflora	Rmu_co8101050.1_g000001 Rmu_sc0005467.1_g000003 Rmu_sc0005467.1_g000004 Rmu_sc0005467.1_g000010 Rmu_sc0005467.1_g000012 Rmu_sc0007199.1_g000001 Rmu_sc0007199.1_g000005 Rmu_sc0007199.1_g000006 Rmu_sc0007199.1_g000008 Rmu_sc0013434.1_g000001 Rmu_ssc0000061.1_g000001
rosa_roxburghii	Rroxscaffold_6G00397570 Rroxscaffold_6G00397590
rosa_rugosa	Rorug03G0056100 Rorug03G0212700 Rorug03G0212800
rosa_samantha	Rh3AG114700 Rh3AG262800 Rh3AG262900 Rh3AG263100 Rh3BG117900 Rh3BG298300 Rh3BG298500 Rh3CG120700 Rh3CG295300 Rh3CG295600 Rh3CG295800 Rh3DG119900 Rh3DG291600 Rh3DG291800
rosa_wichuraiana	Rw3G009700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	842
Acc36I	ACCTGC	1 cut(s)	614
AccB1I	GGYRCC	2 cut(s)	1423, 1445
AccI	GTMKAC	1 cut(s)	405
AciI	CCGC	9 cut(s)	41, 89, 201, 449, 466, 633, 636, 753, 929
AclWI	GGATC	2 cut(s)	124, 361
AcoI	YGGCCR	3 cut(s)	3, 90, 463
AcyI	GRCGYC	1 cut(s)	839
AfaI	GTAC	1 cut(s)	334
AfiI	CCNNNNNNNGG	4 cut(s)	268, 290, 642, 929
AflIII	ACRYGT	1 cut(s)	693
AgsI	TTSAA	3 cut(s)	661, 748, 799
AjnI	CCWGG	1 cut(s)	922
AleI	CACNNNNGTG	1 cut(s)	342
AloI	GAACNNNNNNTCC	2 cut(s)	1226, 1258
AluBI	AGCT	5 cut(s)	256, 428, 884, 953, 1306
AluI	AGCT	5 cut(s)	256, 428, 884, 953, 1306
Alw21I	GWGCWC	2 cut(s)	210, 283
Alw26I	GTCTC	4 cut(s)	356, 846, 997, 1246
Alw44I	GTGCAC	1 cut(s)	279
AlwI	GGATC	2 cut(s)	124, 361
Ama87I	CYCGRG	1 cut(s)	613
AoxI	GGCC	7 cut(s)	3, 90, 121, 183, 240, 463, 756
ApaI	GGGCCC	1 cut(s)	760
ApaLI	GTGCAC	1 cut(s)	279
ApeKI	GCWGC	7 cut(s)	425, 767, 815, 950, 1138, 1211, 1303
Asp700I	GAANNNNTTC	1 cut(s)	970
AspA2I	CCTAGG	1 cut(s)	1048
AspS9I	GGNCC	8 cut(s)	121, 184, 220, 250, 650, 756, 757, 1003
AsuC2I	CCSGG	2 cut(s)	38, 120
AsuHPI	GGTGA	5 cut(s)	77, 622, 886, 1370, 1424
AvaI	CYCGRG	1 cut(s)	613
AvaII	GGWCC	4 cut(s)	220, 250, 650, 1003
AvrII	CCTAGG	1 cut(s)	1048
BaeGI	GKGCMC	3 cut(s)	283, 327, 760
BanI	GGYRCC	2 cut(s)	1423, 1445
BanII	GRGCYC	2 cut(s)	760, 909
Bbv12I	GWGCWC	2 cut(s)	210, 283
BbvI	GCAGC	7 cut(s)	437, 754, 827, 962, 1125, 1223, 1315
BccI	CCATC	6 cut(s)	344, 481, 612, 724, 955, 994
BceAI	ACGGC	4 cut(s)	188, 766, 853, 1417
BciT130I	CCWGG	1 cut(s)	924
BcnI	CCSGG	2 cut(s)	38, 120
BcoDI	GTCTC	4 cut(s)	356, 846, 997, 1246
BfaI	CTAG	3 cut(s)	125, 290, 1049
BfuAI	ACCTGC	1 cut(s)	614
BglI	GCCNNNNNGGC	1 cut(s)	182
BlnI	CCTAGG	1 cut(s)	1048
BmcAI	AGTACT	1 cut(s)	334
Bme1390I	CCNGG	3 cut(s)	38, 120, 924
Bme18I	GGWCC	4 cut(s)	220, 250, 650, 1003
BmeT110I	CYCGRG	1 cut(s)	613
BmgT120I	GGNCC	8 cut(s)	121, 184, 220, 250, 650, 756, 757, 1003
BmiI	GGNNCC	9 cut(s)	45, 221, 251, 532, 757, 758, 759, 1425, 1447
BmrFI	CCNGG	3 cut(s)	38, 120, 924
BmrI	ACTGGG	1 cut(s)	1110
BmsI	GCATC	5 cut(s)	404, 627, 711, 924, 1176
BmuI	ACTGGG	1 cut(s)	1110
BpuMI	CCSGG	2 cut(s)	38, 120
Bsa29I	ATCGAT	1 cut(s)	356
BsaHI	GRCGYC	1 cut(s)	839
BsaI	GGTCTC	1 cut(s)	997
BsaJI	CCNNGG	6 cut(s)	36, 612, 653, 923, 986, 1048
BsaWI	WCCGGW	1 cut(s)	587
BsaXI	ACNNNNNCTCC	2 cut(s)	1226, 1256
Bsc4I	CCNNNNNNNGG	4 cut(s)	268, 290, 642, 929
Bse118I	RCCGGY	1 cut(s)	5
Bse1I	ACTGG	1 cut(s)	1105
BseBI	CCWGG	1 cut(s)	924
BseCI	ATCGAT	1 cut(s)	356
BseDI	CCNNGG	6 cut(s)	36, 612, 653, 923, 986, 1048
BseGI	GGATG	6 cut(s)	492, 600, 726, 735, 1045, 1191
BseLI	CCNNNNNNNGG	4 cut(s)	268, 290, 642, 929
BseMII	CTCAG	2 cut(s)	186, 1277
BseNI	ACTGG	1 cut(s)	1105
BseRI	GAGGAG	3 cut(s)	248, 601, 1313
BseSI	GKGCMC	3 cut(s)	283, 327, 760
BseXI	GCAGC	7 cut(s)	437, 754, 827, 962, 1125, 1223, 1315
BseYI	CCCAGC	1 cut(s)	716
BsgI	GTGCAG	2 cut(s)	834, 959
BshFI	GGCC	7 cut(s)	5, 92, 123, 185, 242, 465, 758
BshNI	GGYRCC	2 cut(s)	1423, 1445
BshVI	ATCGAT	1 cut(s)	356
BsiHKAI	GWGCWC	2 cut(s)	210, 283
BsiHKCI	CYCGRG	1 cut(s)	613
BsiSI	CCGG	5 cut(s)	6, 38, 119, 588, 1295
BslFI	GGGAC	2 cut(s)	263, 482
BslI	CCNNNNNNNGG	4 cut(s)	268, 290, 642, 929
BsmAI	GTCTC	4 cut(s)	356, 846, 997, 1246
BsmBI	CGTCTC	1 cut(s)	846
BsmFI	GGGAC	2 cut(s)	263, 482
BsmI	GAATGC	4 cut(s)	972, 981, 1163, 1296
BsnI	GGCC	7 cut(s)	5, 92, 123, 185, 242, 465, 758
Bso31I	GGTCTC	1 cut(s)	997
BsoBI	CYCGRG	1 cut(s)	613
Bsp120I	GGGCCC	1 cut(s)	756
Bsp1286I	GDGCHC	5 cut(s)	210, 283, 327, 760, 909
Bsp143I	GATC	3 cut(s)	129, 353, 876
Bsp19I	CCATGG	1 cut(s)	986
BspACI	CCGC	9 cut(s)	41, 89, 201, 449, 466, 633, 636, 753, 929
BspANI	GGCC	7 cut(s)	5, 92, 123, 185, 242, 465, 758
BspCNI	CTCAG	2 cut(s)	185, 1278
BspDI	ATCGAT	1 cut(s)	356
BspLI	GGNNCC	9 cut(s)	45, 221, 251, 532, 757, 758, 759, 1425, 1447
BspMI	ACCTGC	1 cut(s)	614
BspPI	GGATC	2 cut(s)	124, 361
BspT107I	GGYRCC	2 cut(s)	1423, 1445
BspTNI	GGTCTC	1 cut(s)	997
BsrFI	RCCGGY	1 cut(s)	5
BsrI	ACTGG	1 cut(s)	1105
BssAI	RCCGGY	1 cut(s)	5
BssECI	CCNNGG	6 cut(s)	36, 612, 653, 923, 986, 1048
BssMI	GATC	3 cut(s)	129, 353, 876
BssNI	GRCGYC	1 cut(s)	839
BssT1I	CCWWGG	3 cut(s)	653, 986, 1048
Bst2UI	CCWGG	1 cut(s)	924
Bst4CI	ACNGT	5 cut(s)	236, 373, 526, 1172, 1428
Bst6I	CTCTTC	2 cut(s)	656, 1332
BstACI	GRCGYC	1 cut(s)	839
BstAPI	GCANNNNNTGC	1 cut(s)	115
BstC8I	GCNNGC	6 cut(s)	7, 116, 142, 866, 1119, 1130
BstDEI	CTNAG	2 cut(s)	172, 1286
BstDSI	CCRYGG	1 cut(s)	986
BstF5I	GGATG	6 cut(s)	492, 600, 726, 735, 1045, 1191
BstKTI	GATC	3 cut(s)	132, 356, 879
BstMAI	GTCTC	4 cut(s)	356, 846, 997, 1246
BstMBI	GATC	3 cut(s)	129, 353, 876
BstNI	CCWGG	1 cut(s)	924
BstNSI	RCATGY	2 cut(s)	118, 1070
BstSCI	CCNGG	3 cut(s)	36, 118, 922
BstSLI	GKGCMC	3 cut(s)	283, 327, 760
BstV1I	GCAGC	7 cut(s)	437, 754, 827, 962, 1125, 1223, 1315
Bsu15I	ATCGAT	1 cut(s)	356
BsuRI	GGCC	7 cut(s)	5, 92, 123, 185, 242, 465, 758
BsuTUI	ATCGAT	1 cut(s)	356
BtgI	CCRYGG	1 cut(s)	986
BtgZI	GCGATG	1 cut(s)	604
BtsCI	GGATG	6 cut(s)	492, 600, 726, 735, 1045, 1191
BtsI	GCAGTG	3 cut(s)	798, 1077, 1183
BtsIMutI	CAGTG	4 cut(s)	522, 798, 1077, 1183
BveI	ACCTGC	1 cut(s)	614
Cac8I	GCNNGC	6 cut(s)	7, 116, 142, 866, 1119, 1130
Cfr10I	RCCGGY	1 cut(s)	5
Cfr13I	GGNCC	8 cut(s)	121, 184, 220, 250, 650, 756, 757, 1003
ClaI	ATCGAT	1 cut(s)	356
CseI	GACGC	1 cut(s)	1331
Csp6I	GTAC	1 cut(s)	333
CviQI	GTAC	1 cut(s)	333
DdeI	CTNAG	2 cut(s)	172, 1286
DpnI	GATC	3 cut(s)	131, 355, 878
DpnII	GATC	3 cut(s)	129, 353, 876
EaeI	YGGCCR	3 cut(s)	3, 90, 463
Eam1104I	CTCTTC	2 cut(s)	656, 1332
EarI	CTCTTC	2 cut(s)	656, 1332
Eco130I	CCWWGG	3 cut(s)	653, 986, 1048
Eco24I	GRGCYC	2 cut(s)	760, 909
Eco31I	GGTCTC	1 cut(s)	997
Eco47I	GGWCC	4 cut(s)	220, 250, 650, 1003
Eco88I	CYCGRG	1 cut(s)	613
EcoO109I	RGGNCCY	3 cut(s)	220, 756, 757
EcoRII	CCWGG	1 cut(s)	922
EcoT14I	CCWWGG	3 cut(s)	653, 986, 1048
EcoT22I	ATGCAT	1 cut(s)	917
EcoT38I	GRGCYC	2 cut(s)	760, 909
ErhI	CCWWGG	3 cut(s)	653, 986, 1048
Esp3I	CGTCTC	1 cut(s)	846
FaqI	GGGAC	2 cut(s)	263, 482
FauI	CCCGC	3 cut(s)	442, 746, 922
FblI	GTMKAC	1 cut(s)	405
FokI	GGATG	6 cut(s)	499, 587, 733, 742, 1052, 1198
FriOI	GRGCYC	2 cut(s)	760, 909
FspBI	CTAG	3 cut(s)	125, 290, 1049
GsaI	CCCAGC	1 cut(s)	720
HaeIII	GGCC	7 cut(s)	5, 92, 123, 185, 242, 465, 758
HapII	CCGG	5 cut(s)	6, 38, 119, 588, 1295
HgaI	GACGC	1 cut(s)	1331
Hin1I	GRCGYC	1 cut(s)	839
HinfI	GANTC	1 cut(s)	364
HpaII	CCGG	5 cut(s)	6, 38, 119, 588, 1295
HphI	GGTGA	5 cut(s)	77, 622, 886, 1370, 1424
Hpy166II	GTNNAC	5 cut(s)	169, 281, 406, 417, 1330
Hpy188I	TCNGA	4 cut(s)	881, 960, 1197, 1287
Hpy188III	TCNNGA	3 cut(s)	151, 344, 845
Hpy8I	GTNNAC	5 cut(s)	169, 281, 406, 417, 1330
Hpy99I	CGWCG	3 cut(s)	851, 874, 1432
HpyAV	CCTTC	4 cut(s)	187, 205, 253, 836
HpyCH4III	ACNGT	5 cut(s)	236, 373, 526, 1172, 1428
HpyCH4IV	ACGT	3 cut(s)	693, 839, 849
HpyF3I	CTNAG	2 cut(s)	172, 1286
HpySE526I	ACGT	3 cut(s)	693, 839, 849
Hsp92I	GRCGYC	1 cut(s)	839
KroI	GCCGGC	1 cut(s)	5
KroNI	GCCGGC	1 cut(s)	7
Kzo9I	GATC	3 cut(s)	129, 353, 876
LmnI	GCTCC	5 cut(s)	261, 530, 787, 881, 1300
Lsp1109I	GCAGC	7 cut(s)	437, 754, 827, 962, 1125, 1223, 1315
LweI	GCATC	5 cut(s)	404, 627, 711, 924, 1176
MaeI	CTAG	3 cut(s)	125, 290, 1049
MaeII	ACGT	3 cut(s)	693, 839, 849
MaeIII	GTNAC	5 cut(s)	65, 344, 665, 1358, 1456
MalI	GATC	3 cut(s)	131, 355, 878
MboI	GATC	3 cut(s)	129, 353, 876
MboII	GAAGA	5 cut(s)	166, 673, 850, 1349, 1427
MfeI	CAATTG	1 cut(s)	1202
MhlI	GDGCHC	5 cut(s)	210, 283, 327, 760, 909
MluCI	AATT	4 cut(s)	576, 1190, 1202, 1266
MlyI	GAGTC	1 cut(s)	358
MmeI	TCCRAC	2 cut(s)	508, 1373
Mph1103I	ATGCAT	1 cut(s)	917
MroNI	GCCGGC	1 cut(s)	5
MroXI	GAANNNNTTC	1 cut(s)	970
MseI	TTAA	1 cut(s)	1464
MslI	CAYNNNNRTG	4 cut(s)	342, 570, 1065, 1220
MspA1I	CMGCKG	1 cut(s)	89
MspI	CCGG	5 cut(s)	6, 38, 119, 588, 1295
MspR9I	CCNGG	3 cut(s)	38, 120, 924
MunI	CAATTG	1 cut(s)	1202
Mva1269I	GAATGC	4 cut(s)	972, 981, 1163, 1296
MvaI	CCWGG	1 cut(s)	924
NaeI	GCCGGC	1 cut(s)	7
NciI	CCSGG	2 cut(s)	38, 120
NcoI	CCATGG	1 cut(s)	986
NdeII	GATC	3 cut(s)	129, 353, 876
NgoMIV	GCCGGC	1 cut(s)	5
NlaIV	GGNNCC	9 cut(s)	45, 221, 251, 532, 757, 758, 759, 1425, 1447
NmeAIII	GCCGAG	1 cut(s)	338
NmuCI	GTSAC	5 cut(s)	65, 344, 665, 1358, 1456
NsiI	ATGCAT	1 cut(s)	917
NspI	RCATGY	2 cut(s)	118, 1070
OliI	CACNNNNGTG	1 cut(s)	342
PaeI	GCATGC	1 cut(s)	118
PctI	GAATGC	4 cut(s)	972, 981, 1163, 1296
PdiI	GCCGGC	1 cut(s)	7
PdmI	GAANNNNTTC	1 cut(s)	970
PleI	GAGTC	1 cut(s)	358
PpsI	GAGTC	1 cut(s)	358
PpuMI	RGGWCCY	1 cut(s)	220
Psp5II	RGGWCCY	1 cut(s)	220
Psp6I	CCWGG	1 cut(s)	922
PspFI	CCCAGC	1 cut(s)	716
PspGI	CCWGG	1 cut(s)	922
PspN4I	GGNNCC	9 cut(s)	45, 221, 251, 532, 757, 758, 759, 1425, 1447
PspOMI	GGGCCC	1 cut(s)	756
PspPI	GGNCC	8 cut(s)	121, 184, 220, 250, 650, 756, 757, 1003
PspPPI	RGGWCCY	1 cut(s)	220
RsaI	GTAC	1 cut(s)	334
RsaNI	GTAC	1 cut(s)	333
RseI	CAYNNNNRTG	4 cut(s)	342, 570, 1065, 1220
SaqAI	TTAA	1 cut(s)	1464
Sau3AI	GATC	3 cut(s)	129, 353, 876
Sau96I	GGNCC	8 cut(s)	121, 184, 220, 250, 650, 756, 757, 1003
ScaI	AGTACT	1 cut(s)	334
SchI	GAGTC	1 cut(s)	358
ScrFI	CCNGG	3 cut(s)	38, 120, 924
SduI	GDGCHC	5 cut(s)	210, 283, 327, 760, 909
SfaNI	GCATC	5 cut(s)	404, 627, 711, 924, 1176
SinI	GGWCC	4 cut(s)	220, 250, 650, 1003
SmiMI	CAYNNNNRTG	4 cut(s)	342, 570, 1065, 1220
SphI	GCATGC	1 cut(s)	118
Sse9I	AATT	4 cut(s)	576, 1190, 1202, 1266
SsiI	CCGC	9 cut(s)	41, 89, 201, 449, 466, 633, 636, 753, 929
SspMI	CTAG	3 cut(s)	125, 290, 1049
StyD4I	CCNGG	3 cut(s)	36, 118, 922
StyI	CCWWGG	3 cut(s)	653, 986, 1048
TaaI	ACNGT	5 cut(s)	236, 373, 526, 1172, 1428
TaiI	ACGT	3 cut(s)	696, 842, 852
TaqI	TCGA	2 cut(s)	356, 846
TasI	AATT	4 cut(s)	576, 1190, 1202, 1266
TatI	WGTACW	1 cut(s)	332
TauI	GCSGC	4 cut(s)	92, 203, 468, 638
Tru1I	TTAA	1 cut(s)	1464
Tru9I	TTAA	1 cut(s)	1464
TscAI	CASTG	4 cut(s)	529, 798, 1077, 1183
TseFI	GTSAC	5 cut(s)	65, 344, 665, 1358, 1456
TseI	GCWGC	7 cut(s)	425, 767, 815, 950, 1138, 1211, 1303
Tsp45I	GTSAC	5 cut(s)	65, 344, 665, 1358, 1456
TspDTI	ATGAA	5 cut(s)	169, 485, 507, 1049, 1267
TspGWI	ACGGA	3 cut(s)	36, 1347, 1377
TspRI	CASTG	4 cut(s)	529, 798, 1077, 1183
VneI	GTGCAC	1 cut(s)	279
VpaK11BI	GGWCC	4 cut(s)	220, 250, 650, 1003
XceI	RCATGY	2 cut(s)	118, 1070
XmaJI	CCTAGG	1 cut(s)	1048
XmiI	GTMKAC	1 cut(s)	405
XmnI	GAANNNNTTC	1 cut(s)	970
XspI	CTAG	3 cut(s)	125, 290, 1049
ZraI	GACGTC	1 cut(s)	840
ZrmI	AGTACT	1 cut(s)	334
Zsp2I	ATGCAT	1 cut(s)	917

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.