Prupe.4G285400_v2.0.a1

Ammonium transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0001358
Physical Location & Seq
Forward (+)
24861391 .. 24863094
1704 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G285400.1

Sequence Viewer

Length: 633 bp
ATGGCCGTCCTCAACACCAACATCTGCGCCGCCACGAGCTTCTTGGTTTGGACTTGGCTCGATGTCATCTTCTTTGAGAAGCCTTCCGTCATTGGAGCTGTCCAAGGAATGATCACTGGCCTCGTCTGCATTACTCCTGCTGCAGGATGGGCCGCTATAGTGATGGGAGTTATGTCAGGCAGTGTGCCCTGGTTCACCATGATGATAATGGACAAGAGGTGGAAACTGCTATCCGCAGTTGACGACACCCTTGGTGTAGTTCACACCCACGCCGTGGCCGGGTTTCTTGGTGGCGTTTTAACGGGGCTTTTCGCTGAGCCTGAACTATGTGCACTCTTTTTGCCCGTCACAAACTCACGCGGAGGCGTGTACGGAGGCTCAGGAGGAATGCAAATCCTCAAACAAATTGTGGGAGCCCTATTTATCATTATTTGCCTAGTCTTACGGTGTATAGTTCCGTTGCGCATGCCGGAGGAACAGTTGCTGATTGGGGATGACGCAGTGCATGGAGAAGAGGCATATGCATTGTGGGGTGATGGGGAGAAGTATGATGTTACTAGGCATGAGCTTTGCTCCGATGATACGTCACACGCTCAAAAATATCCATCCAGTGGTGCCACTCAGGTGGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ammonium_transp

Protein Analysis

211

Amino Acids

22.49

Weight (kDa)

4.93

Isoelectric Point (pI)

32.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 464
AccB1I GGYRCC 1 cut(s) 614
AccB7I CCANNNNNTGG 2 cut(s) 274, 611
AccII CGCG 1 cut(s) 360
AciI CCGC 4 cut(s) 30, 153, 234, 360
AcoI YGGCCR 2 cut(s) 3, 276
AdeI CACNNNGTG 1 cut(s) 274
AfaI GTAC 1 cut(s) 371
AfiI CCNNNNNNNGG 4 cut(s) 143, 274, 279, 611
AjnI CCWGG 1 cut(s) 188
AleI CACNNNNGTG 1 cut(s) 623
AluBI AGCT 3 cut(s) 39, 98, 568
AluI AGCT 3 cut(s) 39, 98, 568
Alw21I GWGCWC 1 cut(s) 334
Alw44I GTGCAC 1 cut(s) 330
AlwNI CAGNNNCTG 1 cut(s) 484
AoxI GGCC 4 cut(s) 3, 118, 150, 276
ApaLI GTGCAC 1 cut(s) 330
ApeKI GCWGC 1 cut(s) 140
AspLEI GCGC 2 cut(s) 29, 465
AspS9I GGNCC 1 cut(s) 150
AsuC2I CCSGG 1 cut(s) 280
AsuHPI GGTGA 2 cut(s) 187, 545
BaeGI GKGCMC 2 cut(s) 189, 334
BanI GGYRCC 1 cut(s) 614
BanII GRGCYC 1 cut(s) 418
BauI CACGAG 1 cut(s) 34
Bbv12I GWGCWC 1 cut(s) 334
BbvI GCAGC 1 cut(s) 127
BccI CCATC 4 cut(s) 141, 157, 530, 613
BceAI ACGGC 1 cut(s) 257
BciT130I CCWGG 1 cut(s) 190
BclI TGATCA 1 cut(s) 111
BcnI CCSGG 1 cut(s) 280
BfaI CTAG 2 cut(s) 437, 558
BfmI CTRYAG 2 cut(s) 141, 156
BisI GCNGC 3 cut(s) 30, 141, 153
BlpI GCTNAGC 1 cut(s) 315
BlsI GCNGC 3 cut(s) 31, 142, 154
Bme1390I CCNGG 2 cut(s) 190, 280
BmgT120I GGNCC 1 cut(s) 150
BmiI GGNNCC 2 cut(s) 415, 616
BmrFI CCNGG 2 cut(s) 190, 280
BplI GAGNNNNNCTC 2 cut(s) 557, 589
Bpu10I CCTNAGC 1 cut(s) 379
Bpu1102I GCTNAGC 1 cut(s) 315
BpuMI CCSGG 1 cut(s) 280
BsaJI CCNNGG 4 cut(s) 103, 188, 250, 273
BsaXI ACNNNNNCTCC 2 cut(s) 464, 494
Bsc4I CCNNNNNNNGG 4 cut(s) 143, 274, 279, 611
Bse1I ACTGG 2 cut(s) 121, 609
BseBI CCWGG 1 cut(s) 190
BseDI CCNNGG 4 cut(s) 103, 188, 250, 273
BseGI GGATG 3 cut(s) 152, 499, 605
BseLI CCNNNNNNNGG 4 cut(s) 143, 274, 279, 611
BseMII CTCAG 2 cut(s) 306, 393
BseNI ACTGG 2 cut(s) 121, 609
BseSI GKGCMC 2 cut(s) 189, 334
BseXI GCAGC 1 cut(s) 127
Bsh1236I CGCG 1 cut(s) 360
BshFI GGCC 4 cut(s) 5, 120, 152, 278
BshNI GGYRCC 1 cut(s) 614
BsiHKAI GWGCWC 1 cut(s) 334
BsiSI CCGG 2 cut(s) 279, 470
BslI CCNNNNNNNGG 4 cut(s) 143, 274, 279, 611
BsmI GAATGC 1 cut(s) 393
BsnI GGCC 4 cut(s) 5, 120, 152, 278
Bsp1286I GDGCHC 3 cut(s) 189, 334, 418
Bsp143I GATC 1 cut(s) 111
Bsp1720I GCTNAGC 1 cut(s) 315
BspACI CCGC 4 cut(s) 30, 153, 234, 360
BspANI GGCC 4 cut(s) 5, 120, 152, 278
BspCNI CTCAG 2 cut(s) 307, 392
BspFNI CGCG 1 cut(s) 360
BspLI GGNNCC 2 cut(s) 415, 616
BspMAI CTGCAG 1 cut(s) 145
BspT107I GGYRCC 1 cut(s) 614
BsrI ACTGG 2 cut(s) 121, 609
BssECI CCNNGG 4 cut(s) 103, 188, 250, 273
BssMI GATC 1 cut(s) 111
BssSI CACGAG 1 cut(s) 34
BssT1I CCWWGG 2 cut(s) 103, 250
Bst2BI CACGAG 1 cut(s) 34
Bst2UI CCWGG 1 cut(s) 190
Bst4CI ACNGT 2 cut(s) 447, 480
Bst6I CTCTTC 1 cut(s) 507
BstC8I GCNNGC 1 cut(s) 467
BstDEI CTNAG 3 cut(s) 315, 379, 621
BstDSI CCRYGG 1 cut(s) 273
BstENI CCTNNNNNAGG 1 cut(s) 141
BstF5I GGATG 3 cut(s) 152, 499, 605
BstFNI CGCG 1 cut(s) 360
BstHHI GCGC 2 cut(s) 29, 465
BstKTI GATC 1 cut(s) 114
BstMBI GATC 1 cut(s) 111
BstMWI GCNNNNNNNGC 2 cut(s) 126, 149
BstNI CCWGG 1 cut(s) 190
BstNSI RCATGY 1 cut(s) 469
BstSCI CCNGG 2 cut(s) 188, 278
BstSFI CTRYAG 2 cut(s) 141, 156
BstSLI GKGCMC 2 cut(s) 189, 334
BstUI CGCG 1 cut(s) 360
BstV1I GCAGC 1 cut(s) 127
BstXI CCANNNNNNTGG 1 cut(s) 625
BsuRI GGCC 4 cut(s) 5, 120, 152, 278
BtgI CCRYGG 1 cut(s) 273
BtsCI GGATG 3 cut(s) 152, 499, 605
BtsI GCAGTG 2 cut(s) 187, 507
BtsIMutI CAGTG 4 cut(s) 114, 187, 507, 616
Cac8I GCNNGC 1 cut(s) 467
CaiI CAGNNNCTG 1 cut(s) 484
CfoI GCGC 2 cut(s) 29, 465
Cfr13I GGNCC 1 cut(s) 150
CseI GACGC 1 cut(s) 506
Csp6I GTAC 1 cut(s) 370
CviAII CATG 4 cut(s) 199, 466, 506, 563
CviQI GTAC 1 cut(s) 370
DdeI CTNAG 3 cut(s) 315, 379, 621
DpnI GATC 1 cut(s) 113
DpnII GATC 1 cut(s) 111
DraIII CACNNNGTG 1 cut(s) 274
EaeI YGGCCR 2 cut(s) 3, 276
Eam1104I CTCTTC 1 cut(s) 507
EarI CTCTTC 1 cut(s) 507
Eco130I CCWWGG 2 cut(s) 103, 250
Eco24I GRGCYC 1 cut(s) 418
EcoNI CCTNNNNNAGG 1 cut(s) 141
EcoRII CCWGG 1 cut(s) 188
EcoT14I CCWWGG 2 cut(s) 103, 250
EcoT22I ATGCAT 1 cut(s) 526
EcoT38I GRGCYC 1 cut(s) 418
ErhI CCWWGG 2 cut(s) 103, 250
FaeI CATG 4 cut(s) 202, 469, 509, 566
FatI CATG 4 cut(s) 198, 465, 505, 562
FauNDI CATATG 1 cut(s) 520
FbaI TGATCA 1 cut(s) 111
Fnu4HI GCNGC 3 cut(s) 30, 141, 153
FokI GGATG 3 cut(s) 159, 506, 592
FriOI GRGCYC 1 cut(s) 418
Fsp4HI GCNGC 3 cut(s) 30, 141, 153
FspBI CTAG 2 cut(s) 437, 558
FspI TGCGCA 1 cut(s) 464
GlaI GCGC 2 cut(s) 28, 464
GluI GCNGC 3 cut(s) 30, 141, 153
HaeIII GGCC 4 cut(s) 5, 120, 152, 278
HapII CCGG 2 cut(s) 279, 470
HgaI GACGC 1 cut(s) 506
HhaI GCGC 2 cut(s) 29, 465
Hin1II CATG 4 cut(s) 202, 469, 509, 566
Hin6I GCGC 2 cut(s) 27, 463
HinP1I GCGC 2 cut(s) 27, 463
HincII GTYRAC 1 cut(s) 241
HindII GTYRAC 1 cut(s) 241
HpaII CCGG 2 cut(s) 279, 470
HphI GGTGA 2 cut(s) 187, 545
Hpy166II GTNNAC 5 cut(s) 195, 241, 262, 332, 370
Hpy188I TCNGA 1 cut(s) 577
Hpy188III TCNNGA 1 cut(s) 381
Hpy8I GTNNAC 5 cut(s) 195, 241, 262, 332, 370
HpyAV CCTTC 1 cut(s) 93
HpyCH4III ACNGT 2 cut(s) 447, 480
HpyCH4IV ACGT 1 cut(s) 584
HpyCH4V TGCA 6 cut(s) 129, 143, 332, 391, 505, 524
HpyF10VI GCNNNNNNNGC 2 cut(s) 126, 149
HpyF3I CTNAG 3 cut(s) 315, 379, 621
HpySE526I ACGT 1 cut(s) 584
Hsp92II CATG 4 cut(s) 202, 469, 509, 566
HspAI GCGC 2 cut(s) 27, 463
Ksp22I TGATCA 1 cut(s) 111
Kzo9I GATC 1 cut(s) 111
LmnI GCTCC 3 cut(s) 95, 413, 578
Lsp1109I GCAGC 1 cut(s) 127
MaeI CTAG 2 cut(s) 437, 558
MaeII ACGT 1 cut(s) 584
MaeIII GTNAC 3 cut(s) 346, 553, 585
MalI GATC 1 cut(s) 113
MboI GATC 1 cut(s) 111
MboII GAAGA 2 cut(s) 61, 524
MhlI GDGCHC 3 cut(s) 189, 334, 418
MluCI AATT 1 cut(s) 405
MnlI CCTC 9 cut(s) 20, 131, 210, 356, 368, 377, 407, 466, 508
Mph1103I ATGCAT 1 cut(s) 526
MseI TTAA 1 cut(s) 299
MslI CAYNNNNRTG 2 cut(s) 200, 623
MspI CCGG 2 cut(s) 279, 470
MspR9I CCNGG 2 cut(s) 190, 280
Mva1269I GAATGC 1 cut(s) 393
MvaI CCWGG 1 cut(s) 190
MvnI CGCG 1 cut(s) 360
MwoI GCNNNNNNNGC 2 cut(s) 126, 149
NciI CCSGG 1 cut(s) 280
NdeI CATATG 1 cut(s) 520
NdeII GATC 1 cut(s) 111
NlaIII CATG 4 cut(s) 202, 469, 509, 566
NlaIV GGNNCC 2 cut(s) 415, 616
NmuCI GTSAC 2 cut(s) 346, 585
NsbI TGCGCA 1 cut(s) 464
NsiI ATGCAT 1 cut(s) 526
NspI RCATGY 1 cut(s) 469
OliI CACNNNNGTG 1 cut(s) 623
PaeI GCATGC 1 cut(s) 469
PctI GAATGC 1 cut(s) 393
PflMI CCANNNNNTGG 2 cut(s) 274, 611
PkrI GCNGC 3 cut(s) 31, 142, 154
Psp6I CCWGG 1 cut(s) 188
PspGI CCWGG 1 cut(s) 188
PspN4I GGNNCC 2 cut(s) 415, 616
PspPI GGNCC 1 cut(s) 150
PstI CTGCAG 1 cut(s) 145
PstNI CAGNNNCTG 1 cut(s) 484
RsaI GTAC 1 cut(s) 371
RsaNI GTAC 1 cut(s) 370
RseI CAYNNNNRTG 2 cut(s) 200, 623
SaqAI TTAA 1 cut(s) 299
SatI GCNGC 3 cut(s) 30, 141, 153
Sau3AI GATC 1 cut(s) 111
Sau96I GGNCC 1 cut(s) 150
ScrFI CCNGG 2 cut(s) 190, 280
SduI GDGCHC 3 cut(s) 189, 334, 418
SetI ASST 6 cut(s) 41, 100, 221, 570, 587, 627
SfcI CTRYAG 2 cut(s) 141, 156
SmiMI CAYNNNNRTG 2 cut(s) 200, 623
SphI GCATGC 1 cut(s) 469
Sse9I AATT 1 cut(s) 405
SsiI CCGC 4 cut(s) 30, 153, 234, 360
SspMI CTAG 2 cut(s) 437, 558
StyD4I CCNGG 2 cut(s) 188, 278
StyI CCWWGG 2 cut(s) 103, 250
TaaI ACNGT 2 cut(s) 447, 480
TaiI ACGT 1 cut(s) 587
TaqI TCGA 1 cut(s) 60
TasI AATT 1 cut(s) 405
TauI GCSGC 2 cut(s) 32, 155
Tru1I TTAA 1 cut(s) 299
Tru9I TTAA 1 cut(s) 299
TscAI CASTG 4 cut(s) 121, 187, 507, 616
TseFI GTSAC 2 cut(s) 346, 585
TseI GCWGC 1 cut(s) 140
Tsp45I GTSAC 2 cut(s) 346, 585
TspGWI ACGGA 3 cut(s) 76, 387, 447
TspRI CASTG 4 cut(s) 121, 187, 507, 616
Van91I CCANNNNNTGG 2 cut(s) 274, 611
VneI GTGCAC 1 cut(s) 330
XagI CCTNNNNNAGG 1 cut(s) 141
XceI RCATGY 1 cut(s) 469
XcmI CCANNNNNNNNNTGG 2 cut(s) 40, 205
XspI CTAG 2 cut(s) 437, 558
Zsp2I ATGCAT 1 cut(s) 526
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.