Rmu_sc0005467.1_g000004

Ammonium transporter

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005467.1
Physical Location & Seq
Reverse (-)
14036 .. 17332
3297 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005467.1_g000004.1.cds

Sequence Viewer

Length: 1467 bp
atggcggcgtacgaggcaactggcggagcgaacccggactggctgaacaaaggtgacaacgcatggcagatgacctctgccacgctggtgggtctccagagcatgccggggctcgtcatcctctacgggagcatagtgaagaagaagtgggcggtaaactccgctttcatggccctctacgccttcgccgccgtcgtgatctgctgggtgacgtgggcctacaagatgtcgttcggggagaagctgctgccgttttggggcaaggccgggcctgctttagggcagaagtttctgctcaagcaggctgccatccccgcctccacacactactacgccaacggcgatgtcgagactgccatggccacgccgtggtacccgatggcgagcatggtgtattttcactgcatgtttgcggccataacaccgatactgttggcagggtcggtgctggggagaatgaacttcaaggcgtggatgatgttcgtgcctctgtggctgaccttctcgtacaccgtcggtgcgtttagcatgtggggcggagggtttttatttcattggggagttatggactacgccggcgggtacgtcattcatctttcttcagggaccgctggtttcatcactgcttactgggtaggacctagggcgcagatggacagggagagattcccaccaaacaacgtgctgctgactttggcgggagcagggttgctgtggatgggatgggctggtttcaacggcggagatccgtatgcggccaacataaccgcctccatggctgtcctcaacactaacatctgcgccgccacgagtctcttggtgtggacggcgctcgatgtcatcttcttcaacaagccctccgtcatcggagcagtccagggaatgattaccggcctcgtcgtcattactcccgctgcaggtaggaatttattaccgacaaaaccaaacaaaaaaccagactctaaaactctaggaacaccggcccaccaacaagggcccaacaacaaaaccctgcccaactgcatctccgtctcccctactccgatcaccggccatatctcctgccctccaacgtcccttttgcgccaacaagcacaacccaccatcatgtcgccatcccggatcgaacaccaggacagatcaaacagagccaatccggatctgatagatccgagcagatcagaaccgtgctgtcattaccacagcaccacccaccattatgtcgcaattcctgccacgccctataaacgcgccgcccctgcaccacaactccggccccagatccgatcgaatagaccccatccagatcggattgatttgatccaaatacagtaccaactagcagtctccaacctcgcgccgccaagccaaaccgccgaccaagccagcaaaggacaaaccacactccggccgccgcctcgatctcccccttcctcgccacacaaaatgtcaccgcaatctccctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

488

Amino Acids

53.01

Weight (kDa)

9.55

Isoelectric Point (pI)

55.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 908
Acc65I GGTACC 1 cut(s) 372
AccB1I GGYRCC 1 cut(s) 372
AccB7I CCANNNNNTGG 1 cut(s) 369
AccII CGCG 2 cut(s) 1251, 1358
AccIII TCCGGA 1 cut(s) 1156
AclWI GGATC 6 cut(s) 740, 1130, 1163, 1167, 1276, 1315
AcoI YGGCCR 5 cut(s) 360, 414, 756, 1051, 1409
AcsI RAATTY 1 cut(s) 925
AcuI CTGAAG 1 cut(s) 585
AdeI CACNNNGTG 1 cut(s) 369
AfaI GTAC 5 cut(s) 11, 374, 509, 584, 1334
AfiI CCNNNNNNNGG 6 cut(s) 257, 278, 369, 917, 1049, 1407
AgsI TTSAA 3 cut(s) 466, 736, 850
AjiI CACGTC 1 cut(s) 213
AjnI CCWGG 2 cut(s) 876, 1131
AleI CACNNNNGTG 1 cut(s) 86
AluBI AGCT 1 cut(s) 244
AluI AGCT 1 cut(s) 244
Alw26I GTCTC 5 cut(s) 98, 344, 818, 1036, 1351
AlwI GGATC 6 cut(s) 740, 1130, 1163, 1167, 1276, 1315
Aor13HI TCCGGA 1 cut(s) 1156
ApaI GGGCCC 1 cut(s) 999
ApeKI GCWGC 5 cut(s) 244, 247, 305, 685, 914
ApoI RAATTY 1 cut(s) 925
Asp718I GGTACC 1 cut(s) 372
AspA2I CCTAGG 1 cut(s) 641
AspLEI GCGC 6 cut(s) 649, 803, 832, 1086, 1253, 1360
AspS9I GGNCC 9 cut(s) 172, 216, 269, 606, 638, 982, 995, 996, 1275
AsuC2I CCSGG 4 cut(s) 35, 108, 268, 1120
AsuHPI GGTGA 4 cut(s) 65, 220, 1039, 1443
AvaII GGWCC 2 cut(s) 606, 638
AvrII CCTAGG 1 cut(s) 641
BaeGI GKGCMC 1 cut(s) 999
BalI TGGCCA 1 cut(s) 362
BanI GGYRCC 1 cut(s) 372
BanII GRGCYC 2 cut(s) 114, 999
BauI CACGAG 1 cut(s) 808
BbvI GCAGC 5 cut(s) 231, 234, 292, 672, 901
BccI CCATC 8 cut(s) 317, 373, 646, 712, 717, 1112, 1123, 1308
BceAI ACGGC 6 cut(s) 176, 235, 352, 355, 754, 843
BciT130I CCWGG 2 cut(s) 878, 1133
BcnI CCSGG 4 cut(s) 35, 108, 268, 1120
BcoDI GTCTC 5 cut(s) 98, 344, 818, 1036, 1351
BfaI CTAG 3 cut(s) 642, 971, 1340
BfmI CTRYAG 1 cut(s) 915
BfoI RGCGCY 1 cut(s) 833
BfuAI ACCTGC 1 cut(s) 908
BglI GCCNNNNNGGC 2 cut(s) 493, 776
BlnI CCTAGG 1 cut(s) 641
Bme1390I CCNGG 6 cut(s) 35, 108, 268, 878, 1120, 1133
Bme18I GGWCC 2 cut(s) 606, 638
BmgBI CACGTC 1 cut(s) 213
BmgT120I GGNCC 9 cut(s) 172, 216, 269, 606, 638, 982, 995, 996, 1275
BmiI GGNNCC 4 cut(s) 374, 607, 997, 1277
BmrFI CCNGG 6 cut(s) 35, 108, 268, 878, 1120, 1133
BmrI ACTGGG 1 cut(s) 640
BmsI GCATC 1 cut(s) 1032
BmuI ACTGGG 1 cut(s) 640
BpmI CTGGAG 1 cut(s) 80
BpuEI CTTGAG 1 cut(s) 281
BpuMI CCSGG 4 cut(s) 35, 108, 268, 1120
BsaI GGTCTC 1 cut(s) 98
BsaJI CCNNGG 6 cut(s) 107, 357, 368, 641, 774, 877
BsaWI WCCGGW 1 cut(s) 1156
BsaXI ACNNNNNCTCC 6 cut(s) 842, 872, 1010, 1040, 1254, 1284
Bsc4I CCNNNNNNNGG 6 cut(s) 257, 278, 369, 917, 1049, 1407
Bse118I RCCGGY 4 cut(s) 575, 890, 979, 1049
Bse1I ACTGG 3 cut(s) 25, 44, 635
BseAI TCCGGA 1 cut(s) 1156
BseBI CCWGG 2 cut(s) 878, 1133
BseDI CCNNGG 6 cut(s) 107, 357, 368, 641, 774, 877
BseGI GGATG 7 cut(s) 117, 309, 480, 723, 728, 1115, 1300
BseLI CCNNNNNNNGG 6 cut(s) 257, 278, 369, 917, 1049, 1407
BseNI ACTGG 3 cut(s) 25, 44, 635
BseSI GKGCMC 1 cut(s) 999
BseX3I CGGCCG 1 cut(s) 1409
BseXI GCAGC 5 cut(s) 231, 234, 292, 672, 901
BseYI CCCAGC 2 cut(s) 204, 448
BsgI GTGCAG 1 cut(s) 1245
Bsh1236I CGCG 2 cut(s) 1251, 1358
Bsh1285I CGRYCG 2 cut(s) 1289, 1412
BshNI GGYRCC 1 cut(s) 372
BsiEI CGRYCG 2 cut(s) 1289, 1412
BsiWI CGTACG 1 cut(s) 9
BslFI GGGAC 2 cut(s) 619, 1060
BslI CCNNNNNNNGG 6 cut(s) 257, 278, 369, 917, 1049, 1407
BsmAI GTCTC 5 cut(s) 98, 344, 818, 1036, 1351
BsmBI CGTCTC 1 cut(s) 1036
BsmFI GGGAC 2 cut(s) 619, 1060
Bso31I GGTCTC 1 cut(s) 98
Bsp120I GGGCCC 1 cut(s) 995
Bsp1286I GDGCHC 2 cut(s) 114, 999
Bsp13I TCCGGA 1 cut(s) 1156
Bsp19I CCATGG 2 cut(s) 357, 774
BspEI TCCGGA 1 cut(s) 1156
BspFNI CGCG 2 cut(s) 1251, 1358
BspLI GGNNCC 4 cut(s) 374, 607, 997, 1277
BspMAI CTGCAG 1 cut(s) 919
BspMI ACCTGC 1 cut(s) 908
BspPI GGATC 6 cut(s) 740, 1130, 1163, 1167, 1276, 1315
BspT107I GGYRCC 1 cut(s) 372
BspTNI GGTCTC 1 cut(s) 98
BsrFI RCCGGY 4 cut(s) 575, 890, 979, 1049
BsrI ACTGG 3 cut(s) 25, 44, 635
BssAI RCCGGY 4 cut(s) 575, 890, 979, 1049
BssECI CCNNGG 6 cut(s) 107, 357, 368, 641, 774, 877
BssSI CACGAG 1 cut(s) 808
BssT1I CCWWGG 3 cut(s) 357, 641, 774
Bst2BI CACGAG 1 cut(s) 808
Bst2UI CCWGG 2 cut(s) 878, 1133
Bst4CI ACNGT 4 cut(s) 432, 514, 1188, 1332
BstAPI GCANNNNNTGC 1 cut(s) 1232
BstC8I GCNNGC 6 cut(s) 104, 273, 303, 385, 577, 1387
BstDSI CCRYGG 3 cut(s) 357, 368, 774
BstENI CCTNNNNNAGG 1 cut(s) 276
BstF5I GGATG 7 cut(s) 117, 309, 480, 723, 728, 1115, 1300
BstFNI CGCG 2 cut(s) 1251, 1358
BstH2I RGCGCY 1 cut(s) 833
BstHHI GCGC 6 cut(s) 649, 803, 832, 1086, 1253, 1360
BstMAI GTCTC 5 cut(s) 98, 344, 818, 1036, 1351
BstMCI CGRYCG 2 cut(s) 1289, 1412
BstNI CCWGG 2 cut(s) 878, 1133
BstNSI RCATGY 3 cut(s) 106, 409, 532
BstSCI CCNGG 6 cut(s) 33, 106, 266, 876, 1118, 1131
BstSFI CTRYAG 1 cut(s) 915
BstSLI GKGCMC 1 cut(s) 999
BstUI CGCG 2 cut(s) 1251, 1358
BstV1I GCAGC 5 cut(s) 231, 234, 292, 672, 901
BstX2I RGATCY 4 cut(s) 745, 1159, 1168, 1281
BstXI CCANNNNNNTGG 1 cut(s) 88
BstYI RGATCY 4 cut(s) 745, 1159, 1168, 1281
BstZI CGGCCG 1 cut(s) 1409
BtgI CCRYGG 3 cut(s) 357, 368, 774
BtgZI GCGATG 1 cut(s) 357
BtrI CACGTC 1 cut(s) 213
BtsCI GGATG 7 cut(s) 117, 309, 480, 723, 728, 1115, 1300
BtsI GCAGTG 2 cut(s) 400, 621
BtsIMutI CAGTG 2 cut(s) 400, 621
BveI ACCTGC 1 cut(s) 908
Cac8I GCNNGC 6 cut(s) 104, 273, 303, 385, 577, 1387
CfoI GCGC 6 cut(s) 649, 803, 832, 1086, 1253, 1360
Cfr10I RCCGGY 4 cut(s) 575, 890, 979, 1049
Cfr13I GGNCC 9 cut(s) 172, 216, 269, 606, 638, 982, 995, 996, 1275
Csp6I GTAC 5 cut(s) 10, 373, 508, 583, 1333
CviAII CATG 9 cut(s) 63, 103, 169, 358, 388, 406, 529, 775, 1108
CviQI GTAC 5 cut(s) 10, 373, 508, 583, 1333
DraIII CACNNNGTG 1 cut(s) 369
EaeI YGGCCR 5 cut(s) 360, 414, 756, 1051, 1409
EagI CGGCCG 1 cut(s) 1409
EciI GGCGGA 3 cut(s) 39, 552, 756
EclXI CGGCCG 1 cut(s) 1409
Eco130I CCWWGG 3 cut(s) 357, 641, 774
Eco24I GRGCYC 2 cut(s) 114, 999
Eco31I GGTCTC 1 cut(s) 98
Eco47I GGWCC 2 cut(s) 606, 638
Eco52I CGGCCG 1 cut(s) 1409
Eco57I CTGAAG 1 cut(s) 585
EcoNI CCTNNNNNAGG 1 cut(s) 276
EcoO109I RGGNCCY 2 cut(s) 638, 995
EcoRII CCWGG 2 cut(s) 876, 1131
EcoT14I CCWWGG 3 cut(s) 357, 641, 774
EcoT38I GRGCYC 2 cut(s) 114, 999
ErhI CCWWGG 3 cut(s) 357, 641, 774
Esp3I CGTCTC 1 cut(s) 1036
FaeI CATG 9 cut(s) 66, 106, 172, 361, 391, 409, 532, 778, 1111
FaqI GGGAC 2 cut(s) 619, 1060
FatI CATG 9 cut(s) 62, 102, 168, 357, 387, 405, 528, 774, 1107
FauI CCCGC 4 cut(s) 322, 572, 691, 919
FokI GGATG 7 cut(s) 104, 296, 487, 730, 735, 1102, 1287
FriOI GRGCYC 2 cut(s) 114, 999
FspBI CTAG 3 cut(s) 642, 971, 1340
GlaI GCGC 6 cut(s) 648, 802, 831, 1085, 1252, 1359
GsaI CCCAGC 2 cut(s) 208, 452
GsuI CTGGAG 1 cut(s) 80
HaeII RGCGCY 1 cut(s) 833
HhaI GCGC 6 cut(s) 649, 803, 832, 1086, 1253, 1360
Hin1II CATG 9 cut(s) 66, 106, 172, 361, 391, 409, 532, 778, 1111
Hin6I GCGC 6 cut(s) 647, 801, 830, 1084, 1251, 1358
HinP1I GCGC 6 cut(s) 647, 801, 830, 1084, 1251, 1358
HinfI GANTC 3 cut(s) 666, 811, 959
HphI GGTGA 4 cut(s) 65, 220, 1039, 1443
Hpy166II GTNNAC 3 cut(s) 157, 510, 825
Hpy188I TCNGA 7 cut(s) 869, 1044, 1164, 1173, 1183, 1286, 1311
Hpy188III TCNNGA 5 cut(s) 97, 196, 349, 1157, 1304
Hpy8I GTNNAC 3 cut(s) 157, 510, 825
Hpy99I CGWCG 3 cut(s) 197, 518, 902
HpyAV CCTTC 3 cut(s) 193, 511, 1440
HpyCH4III ACNGT 4 cut(s) 432, 514, 1188, 1332
HpyCH4IV ACGT 4 cut(s) 212, 585, 681, 1073
HpyCH4V TGCA 4 cut(s) 405, 917, 1023, 1262
HpySE526I ACGT 4 cut(s) 212, 585, 681, 1073
Hsp92II CATG 9 cut(s) 66, 106, 172, 361, 391, 409, 532, 778, 1111
HspAI GCGC 6 cut(s) 647, 801, 830, 1084, 1251, 1358
Kpn2I TCCGGA 1 cut(s) 1156
KpnI GGTACC 1 cut(s) 376
KroI GCCGGC 1 cut(s) 575
KroNI GCCGGC 1 cut(s) 577
LmnI GCTCC 4 cut(s) 26, 129, 701, 869
Lsp1109I GCAGC 5 cut(s) 231, 234, 292, 672, 901
LweI GCATC 1 cut(s) 1032
MaeI CTAG 3 cut(s) 642, 971, 1340
MaeII ACGT 4 cut(s) 212, 585, 681, 1073
MaeIII GTNAC 3 cut(s) 53, 208, 1449
MboII GAAGA 5 cut(s) 151, 154, 591, 835, 838
MflI RGATCY 4 cut(s) 745, 1159, 1168, 1281
MhlI GDGCHC 2 cut(s) 114, 999
MlsI TGGCCA 1 cut(s) 362
MluCI AATT 2 cut(s) 925, 1227
MluNI TGGCCA 1 cut(s) 362
MlyI GAGTC 2 cut(s) 820, 953
MmeI TCCRAC 2 cut(s) 1094, 1374
Mox20I TGGCCA 1 cut(s) 362
MreI CGCCGGCG 1 cut(s) 575
MroI TCCGGA 1 cut(s) 1156
MroNI GCCGGC 1 cut(s) 575
MscI TGGCCA 1 cut(s) 362
MslI CAYNNNNRTG 3 cut(s) 86, 1106, 1218
Msp20I TGGCCA 1 cut(s) 362
MspA1I CMGCKG 2 cut(s) 611, 914
MspR9I CCNGG 6 cut(s) 35, 108, 268, 878, 1120, 1133
MvaI CCWGG 2 cut(s) 878, 1133
MvnI CGCG 2 cut(s) 1251, 1358
NaeI GCCGGC 1 cut(s) 577
NciI CCSGG 4 cut(s) 35, 108, 268, 1120
NcoI CCATGG 2 cut(s) 357, 774
NgoMIV GCCGGC 1 cut(s) 575
NlaIII CATG 9 cut(s) 66, 106, 172, 361, 391, 409, 532, 778, 1111
NlaIV GGNNCC 4 cut(s) 374, 607, 997, 1277
NmuCI GTSAC 3 cut(s) 53, 208, 1449
NspI RCATGY 3 cut(s) 106, 409, 532
OliI CACNNNNGTG 1 cut(s) 86
PaeI GCATGC 1 cut(s) 106
PcsI WCGNNNNNNNCGW 3 cut(s) 192, 339, 345
PdiI GCCGGC 1 cut(s) 577
PfeI GAWTC 1 cut(s) 666
Pfl23II CGTACG 1 cut(s) 9
PflMI CCANNNNNTGG 1 cut(s) 369
PfoI TCCNGGA 1 cut(s) 1118
Ple19I CGATCG 1 cut(s) 1289
PleI GAGTC 2 cut(s) 819, 953
PpsI GAGTC 2 cut(s) 819, 953
PpuMI RGGWCCY 1 cut(s) 638
Psp5II RGGWCCY 1 cut(s) 638
Psp6I CCWGG 2 cut(s) 876, 1131
PspFI CCCAGC 2 cut(s) 204, 448
PspGI CCWGG 2 cut(s) 876, 1131
PspLI CGTACG 1 cut(s) 9
PspN4I GGNNCC 4 cut(s) 374, 607, 997, 1277
PspOMI GGGCCC 1 cut(s) 995
PspPI GGNCC 9 cut(s) 172, 216, 269, 606, 638, 982, 995, 996, 1275
PspPPI RGGWCCY 1 cut(s) 638
PstI CTGCAG 1 cut(s) 919
PsuI RGATCY 4 cut(s) 745, 1159, 1168, 1281
PvuI CGATCG 1 cut(s) 1289
RsaI GTAC 5 cut(s) 11, 374, 509, 584, 1334
RsaNI GTAC 5 cut(s) 10, 373, 508, 583, 1333
RseI CAYNNNNRTG 3 cut(s) 86, 1106, 1218
Sau96I GGNCC 9 cut(s) 172, 216, 269, 606, 638, 982, 995, 996, 1275
SchI GAGTC 2 cut(s) 820, 953
ScrFI CCNGG 6 cut(s) 35, 108, 268, 878, 1120, 1133
SduI GDGCHC 2 cut(s) 114, 999
SfaNI GCATC 1 cut(s) 1032
SfcI CTRYAG 1 cut(s) 915
SgrAI CRCCGGYG 1 cut(s) 575
SinI GGWCC 2 cut(s) 606, 638
SmiMI CAYNNNNRTG 3 cut(s) 86, 1106, 1218
SmlI CTYRAG 1 cut(s) 296
SmoI CTYRAG 1 cut(s) 296
SphI GCATGC 1 cut(s) 106
Sse9I AATT 2 cut(s) 925, 1227
SspMI CTAG 3 cut(s) 642, 971, 1340
StyD4I CCNGG 6 cut(s) 33, 106, 266, 876, 1118, 1131
StyI CCWWGG 3 cut(s) 357, 641, 774
TaaI ACNGT 4 cut(s) 432, 514, 1188, 1332
TaiI ACGT 4 cut(s) 215, 588, 684, 1076
TaqI TCGA 5 cut(s) 348, 834, 1125, 1289, 1420
TasI AATT 2 cut(s) 925, 1227
TauI GCSGC 9 cut(s) 8, 191, 416, 758, 806, 1256, 1363, 1414, 1417
TfiI GAWTC 1 cut(s) 666
TscAI CASTG 2 cut(s) 407, 628
TseFI GTSAC 3 cut(s) 53, 208, 1449
TseI GCWGC 5 cut(s) 244, 247, 305, 685, 914
Tsp45I GTSAC 3 cut(s) 53, 208, 1449
TspDTI ATGAA 5 cut(s) 157, 473, 542, 581, 607
TspGWI ACGGA 3 cut(s) 738, 850, 1018
TspRI CASTG 2 cut(s) 407, 628
Van91I CCANNNNNTGG 1 cut(s) 369
VpaK11BI GGWCC 2 cut(s) 606, 638
XagI CCTNNNNNAGG 1 cut(s) 276
XapI RAATTY 1 cut(s) 925
XceI RCATGY 3 cut(s) 106, 409, 532
XcmI CCANNNNNNNNNTGG 1 cut(s) 814
XmaJI CCTAGG 1 cut(s) 641
XspI CTAG 3 cut(s) 642, 971, 1340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.