Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0001358

Physical Location & Seq

Genomic Coordinates Forward (+)

29276458 .. 29291383

Gene Structure 14926 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG262900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGGCGGCGTATGAGGCAACTGGCGGAGCGAACCCGGACTGGCTGAACAAAGGTGACAACGCATGGCAGATGACCTCCGCCACGCTGGTGGGTCTCCAGAGCGTGCCGGGGCTCGTCATCCTCTACGGGAGCATAGTGAAGAAGAAGTGGGCGGTAAACTCCGCTTTCATGGCCCTCTACGCCTTCGCCGCCGTCTTGATCTGCTGGGTGACGTGGGCCTACAAGATGTCGTTCGGGGAGAAGCTGCTGCCGTTTTGGGGCAAGGCCGGGCCTGCCTTAGGGCAGAAGTTTCTGCTCAAGCAGGCTGCCATCCCCGCCTCCACACACTACCACGCCAACGGCGATCTCGAGACTGCCATGGCCACGCCGTGGTACCCTATGGCGAGCATGGTGTACTTTCACTGCATGTTTGCGGCCATAACACCGATACTGTTGGCAGGGTCGGTGCTGGGGAGAATGAACTTCAAGGCGTGGATGATGTTCGTGCCTCTGTGGCTGACCTTCTCGTACACCGTCGGTGCGTTTAGCATGTGGGGCGGAGGGTTTTTATTTCATTGGGGAGTTATGGACTACGCCGGCGGGTACGTCATTCATCTTTCTTCAGGGACCGCTGGTTTCATCACTGCTTACTGGGTAGGACCTAGGGTGCAGATGGACAGGGAGAGATTCCCACCAAACAACGTGCTGCTGACTTTGGTGGGAGCAGGGTTGCTGTGGATGGGATGGGCCGGTTTCAACGGCGGAGATCCGTATGCGGCCAACATAACCGCCTCCATGGCTGTCCTCAACACTAACATTTGCGCCGCCACGAGTCTCTTGGTGTGGACGGCGCTCGATGTCATCTTCTTCAACAAGCCCTCCGTCATCGGAGCAGTCCAGGGAATGATTACTGGCCTCGTCGTCATTACTCCCGCTGCAGGTCTTGTACAAGGATGGGCAGCAATAGTGATGGGAGTATTGGCTGGCAGCGTGCCATGGTTCACCATGATGATCGTAGACAAAAGGTGGAGACTCTTAACCGCAGTTGACGACACCCTCGGCGTCGTCCATACCCACGCAGTGGCCGGATTCCTAGGCGGCATATTGACCGGCATCTTTGCCGAGCCCCAACTATGTGCGCTCTTCTTGCAAGTCACGAACTCTCGCGGGGTAGCCTACGGGGGCATCCAAGTGTTCAAACAAATCGCAGCTGCCCTGTTCATCATCGGATGGAACATCGTGGTGACCTCAATCATTTGTGTGGCAATTCGGTTTGTGGTTCCTCTACGCATGCCGGAGGAGCAGTTGTTGATTGGAGATAACGCAGTGCATGGGGAAGAGGCCTACGCTTTGTGGGGTGATGGGGAGCTGTACGATCATCCTTCTACTATTATAAATAATAACGGACGTGTGGCTGAGGCTCCCAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ammonium_transp

Protein Analysis

469

Amino Acids

50.6

Weight (kDa)

6.75

Isoelectric Point (pI)

30.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ammonium_transp	PF00909	21 - 442	9.1e-79	Ammonium Transporter Family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38290 AT2G38290
fragaria_vesca	FvH4_1g25720 FvH4_6g11040
malus_domestica	MD04G1162200.v1.1 MD12G1174700.v1.1 MD15G1139800.v1.1
prunus_persica	Prupe.4G283900_v2.0.a1 Prupe.4G285000_v2.0.a1 Prupe.4G285300_v2.0.a1 Prupe.4G285400_v2.0.a1 Prupe.6G281900_v2.0.a1
pyrus_communis	pycom04g14520 pycom15g12630
rosa_chinensis	RchiOBHm_Chr3g0462351 RchiOBHm_Chr3g0484601 RchiOBHm_Chr3g0484621 RchiOBHm_Chr3g0484631 RchiOBHm_Chr3g0484641
rosa_laevigata	RLG00000023210 RLG00000023213 RLG00000024864
rosa_multiflora	Rmu_co8101050.1_g000001 Rmu_sc0005467.1_g000003 Rmu_sc0005467.1_g000004 Rmu_sc0005467.1_g000010 Rmu_sc0005467.1_g000012 Rmu_sc0007199.1_g000001 Rmu_sc0007199.1_g000005 Rmu_sc0007199.1_g000006 Rmu_sc0007199.1_g000008 Rmu_sc0013434.1_g000001 Rmu_ssc0000061.1_g000001
rosa_roxburghii	Rroxscaffold_6G00397570 Rroxscaffold_6G00397590
rosa_rugosa	Rorug03G0056100 Rorug03G0212700 Rorug03G0212800
rosa_samantha	Rh3AG114700 Rh3AG262800 Rh3AG262900 Rh3AG263100 Rh3BG117900 Rh3BG298300 Rh3BG298500 Rh3CG120700 Rh3CG295300 Rh3CG295600 Rh3CG295800 Rh3DG119900 Rh3DG291600 Rh3DG291800
rosa_wichuraiana	Rw3G009700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1373
Acc36I	ACCTGC	1 cut(s)	908
Acc65I	GGTACC	1 cut(s)	372
AccB1I	GGYRCC	1 cut(s)	372
AccB7I	CCANNNNNTGG	2 cut(s)	369, 1060
AccI	GTMKAC	1 cut(s)	996
AccII	CGCG	1 cut(s)	1146
AclWI	GGATC	1 cut(s)	740
AcoI	YGGCCR	4 cut(s)	360, 414, 756, 1062
AcuI	CTGAAG	1 cut(s)	585
AcyI	GRCGYC	1 cut(s)	1041
AdeI	CACNNNGTG	2 cut(s)	369, 1060
AfaI	GTAC	6 cut(s)	374, 395, 509, 584, 927, 1352
AfiI	CCNNNNNNNGG	5 cut(s)	257, 278, 369, 917, 1060
AflIII	ACRYGT	1 cut(s)	1387
AgsI	TTSAA	4 cut(s)	466, 736, 850, 1177
AjiI	CACGTC	2 cut(s)	213, 1388
AjnI	CCWGG	1 cut(s)	876
AleI	CACNNNNGTG	1 cut(s)	86
AluBI	AGCT	3 cut(s)	244, 1190, 1348
AluI	AGCT	3 cut(s)	244, 1190, 1348
Alw26I	GTCTC	4 cut(s)	98, 344, 818, 1003
AlwI	GGATC	1 cut(s)	740
Ama87I	CYCGRG	1 cut(s)	347
ApeKI	GCWGC	9 cut(s)	244, 247, 305, 685, 914, 938, 966, 1187, 1190
Asp718I	GGTACC	1 cut(s)	372
AspA2I	CCTAGG	2 cut(s)	641, 1072
AspLEI	GCGC	3 cut(s)	803, 832, 1120
AspS9I	GGNCC	6 cut(s)	172, 216, 269, 606, 638, 726
AsuC2I	CCSGG	3 cut(s)	35, 108, 268
AsuHPI	GGTGA	5 cut(s)	65, 220, 973, 1234, 1349
AvaI	CYCGRG	1 cut(s)	347
AvaII	GGWCC	2 cut(s)	606, 638
AvrII	CCTAGG	2 cut(s)	641, 1072
AxyI	CCTNAGG	1 cut(s)	277
BalI	TGGCCA	1 cut(s)	362
BanI	GGYRCC	1 cut(s)	372
BanII	GRGCYC	2 cut(s)	114, 1107
BauI	CACGAG	1 cut(s)	808
BbvCI	CCTCAGC	1 cut(s)	1395
BbvI	GCAGC	9 cut(s)	231, 234, 292, 672, 901, 950, 978, 1177, 1199
BccI	CCATC	8 cut(s)	317, 646, 712, 717, 927, 943, 1203, 1334
BceAI	ACGGC	6 cut(s)	176, 235, 352, 355, 754, 843
BciT130I	CCWGG	1 cut(s)	878
BcnI	CCSGG	3 cut(s)	35, 108, 268
BcoDI	GTCTC	4 cut(s)	98, 344, 818, 1003
BfaI	CTAG	2 cut(s)	642, 1073
BfmI	CTRYAG	1 cut(s)	915
BfoI	RGCGCY	1 cut(s)	833
BfuAI	ACCTGC	1 cut(s)	908
BglI	GCCNNNNNGGC	2 cut(s)	493, 776
BlnI	CCTAGG	2 cut(s)	641, 1072
Bme1390I	CCNGG	4 cut(s)	35, 108, 268, 878
Bme18I	GGWCC	2 cut(s)	606, 638
BmeT110I	CYCGRG	1 cut(s)	347
BmgBI	CACGTC	2 cut(s)	213, 1388
BmgT120I	GGNCC	6 cut(s)	172, 216, 269, 606, 638, 726
BmiI	GGNNCC	4 cut(s)	374, 607, 1260, 1401
BmrFI	CCNGG	4 cut(s)	35, 108, 268, 878
BmrI	ACTGGG	2 cut(s)	640, 1398
BmsI	GCATC	2 cut(s)	1101, 1173
BmuI	ACTGGG	2 cut(s)	640, 1398
BpmI	CTGGAG	1 cut(s)	80
Bpu10I	CCTNAGC	1 cut(s)	1395
BpuEI	CTTGAG	1 cut(s)	281
BpuMI	CCSGG	3 cut(s)	35, 108, 268
BsaHI	GRCGYC	1 cut(s)	1041
BsaI	GGTCTC	1 cut(s)	98
BsaJI	CCNNGG	9 cut(s)	107, 357, 368, 641, 774, 877, 974, 1036, 1072
BsaXI	ACNNNNNCTCC	6 cut(s)	842, 872, 1268, 1271, 1298, 1301
Bsc4I	CCNNNNNNNGG	5 cut(s)	257, 278, 369, 917, 1060
Bse118I	RCCGGY	3 cut(s)	575, 728, 1088
Bse1I	ACTGG	5 cut(s)	25, 44, 635, 895, 1404
Bse21I	CCTNAGG	1 cut(s)	277
BseBI	CCWGG	1 cut(s)	878
BseDI	CCNNGG	9 cut(s)	107, 357, 368, 641, 774, 877, 974, 1036, 1072
BseGI	GGATG	9 cut(s)	117, 309, 480, 723, 728, 938, 1164, 1214, 1357
BseLI	CCNNNNNNNGG	5 cut(s)	257, 278, 369, 917, 1060
BseMII	CTCAG	1 cut(s)	1386
BseNI	ACTGG	5 cut(s)	25, 44, 635, 895, 1404
BseRI	GAGGAG	1 cut(s)	1292
BseXI	GCAGC	9 cut(s)	231, 234, 292, 672, 901, 950, 978, 1177, 1199
BseYI	CCCAGC	2 cut(s)	204, 448
BsgI	GTGCAG	1 cut(s)	668
Bsh1236I	CGCG	1 cut(s)	1146
BshNI	GGYRCC	1 cut(s)	372
BsiHKCI	CYCGRG	1 cut(s)	347
BsiSI	CCGG	8 cut(s)	35, 107, 267, 576, 729, 1065, 1089, 1274
BslFI	GGGAC	1 cut(s)	619
BslI	CCNNNNNNNGG	5 cut(s)	257, 278, 369, 917, 1060
BsmAI	GTCTC	4 cut(s)	98, 344, 818, 1003
BsmFI	GGGAC	1 cut(s)	619
Bso31I	GGTCTC	1 cut(s)	98
BsoBI	CYCGRG	1 cut(s)	347
Bsp1286I	GDGCHC	2 cut(s)	114, 1107
Bsp1407I	TGTACA	1 cut(s)	925
Bsp143I	GATC	5 cut(s)	198, 343, 745, 990, 1354
Bsp19I	CCATGG	3 cut(s)	357, 774, 974
BspCNI	CTCAG	1 cut(s)	1387
BspFNI	CGCG	1 cut(s)	1146
BspLI	GGNNCC	4 cut(s)	374, 607, 1260, 1401
BspMAI	CTGCAG	1 cut(s)	919
BspMI	ACCTGC	1 cut(s)	908
BspPI	GGATC	1 cut(s)	740
BspQI	GCTCTTC	1 cut(s)	1127
BspT107I	GGYRCC	1 cut(s)	372
BspTNI	GGTCTC	1 cut(s)	98
BsrFI	RCCGGY	3 cut(s)	575, 728, 1088
BsrGI	TGTACA	1 cut(s)	925
BsrI	ACTGG	5 cut(s)	25, 44, 635, 895, 1404
BssAI	RCCGGY	3 cut(s)	575, 728, 1088
BssECI	CCNNGG	9 cut(s)	107, 357, 368, 641, 774, 877, 974, 1036, 1072
BssMI	GATC	5 cut(s)	198, 343, 745, 990, 1354
BssNI	GRCGYC	1 cut(s)	1041
BssSI	CACGAG	1 cut(s)	808
BssT1I	CCWWGG	5 cut(s)	357, 641, 774, 974, 1072
Bst2BI	CACGAG	1 cut(s)	808
Bst2UI	CCWGG	1 cut(s)	878
Bst4CI	ACNGT	2 cut(s)	432, 514
Bst6I	CTCTTC	2 cut(s)	1127, 1311
BstACI	GRCGYC	1 cut(s)	1041
BstAUI	TGTACA	1 cut(s)	925
BstC8I	GCNNGC	8 cut(s)	104, 273, 303, 385, 577, 964, 971, 1271
BstDEI	CTNAG	2 cut(s)	277, 1395
BstDSI	CCRYGG	4 cut(s)	357, 368, 774, 974
BstEII	GGTNACC	1 cut(s)	1222
BstENI	CCTNNNNNAGG	1 cut(s)	276
BstF5I	GGATG	9 cut(s)	117, 309, 480, 723, 728, 938, 1164, 1214, 1357
BstFNI	CGCG	1 cut(s)	1146
BstH2I	RGCGCY	1 cut(s)	833
BstHHI	GCGC	3 cut(s)	803, 832, 1120
BstKTI	GATC	5 cut(s)	201, 346, 748, 993, 1357
BstMAI	GTCTC	4 cut(s)	98, 344, 818, 1003
BstMBI	GATC	5 cut(s)	198, 343, 745, 990, 1354
BstNI	CCWGG	1 cut(s)	878
BstNSI	RCATGY	3 cut(s)	409, 532, 1273
BstPI	GGTNACC	1 cut(s)	1222
BstSCI	CCNGG	4 cut(s)	33, 106, 266, 876
BstSFI	CTRYAG	1 cut(s)	915
BstUI	CGCG	1 cut(s)	1146
BstV1I	GCAGC	9 cut(s)	231, 234, 292, 672, 901, 950, 978, 1177, 1199
BstX2I	RGATCY	1 cut(s)	745
BstXI	CCANNNNNNTGG	1 cut(s)	88
BstYI	RGATCY	1 cut(s)	745
Bsu36I	CCTNAGG	1 cut(s)	277
BtgI	CCRYGG	4 cut(s)	357, 368, 774, 974
BtrI	CACGTC	2 cut(s)	213, 1388
BtsCI	GGATG	9 cut(s)	117, 309, 480, 723, 728, 938, 1164, 1214, 1357
BtsI	GCAGTG	4 cut(s)	400, 621, 1065, 1311
BtsIMutI	CAGTG	4 cut(s)	400, 621, 1065, 1311
BveI	ACCTGC	1 cut(s)	908
Cac8I	GCNNGC	8 cut(s)	104, 273, 303, 385, 577, 964, 971, 1271
CfoI	GCGC	3 cut(s)	803, 832, 1120
Cfr10I	RCCGGY	3 cut(s)	575, 728, 1088
Cfr13I	GGNCC	6 cut(s)	172, 216, 269, 606, 638, 726
CseI	GACGC	1 cut(s)	1030
Csp6I	GTAC	6 cut(s)	373, 394, 508, 583, 926, 1351
CviQI	GTAC	6 cut(s)	373, 394, 508, 583, 926, 1351
DdeI	CTNAG	2 cut(s)	277, 1395
DpnI	GATC	5 cut(s)	200, 345, 747, 992, 1356
DpnII	GATC	5 cut(s)	198, 343, 745, 990, 1354
DraIII	CACNNNGTG	2 cut(s)	369, 1060
EaeI	YGGCCR	4 cut(s)	360, 414, 756, 1062
Eam1104I	CTCTTC	2 cut(s)	1127, 1311
EarI	CTCTTC	2 cut(s)	1127, 1311
EciI	GGCGGA	4 cut(s)	39, 67, 552, 756
Eco130I	CCWWGG	5 cut(s)	357, 641, 774, 974, 1072
Eco147I	AGGCCT	1 cut(s)	1322
Eco24I	GRGCYC	2 cut(s)	114, 1107
Eco31I	GGTCTC	1 cut(s)	98
Eco47I	GGWCC	2 cut(s)	606, 638
Eco57I	CTGAAG	1 cut(s)	585
Eco81I	CCTNAGG	1 cut(s)	277
Eco88I	CYCGRG	1 cut(s)	347
Eco91I	GGTNACC	1 cut(s)	1222
EcoNI	CCTNNNNNAGG	1 cut(s)	276
EcoO109I	RGGNCCY	1 cut(s)	638
EcoO65I	GGTNACC	1 cut(s)	1222
EcoRII	CCWGG	1 cut(s)	876
EcoT14I	CCWWGG	5 cut(s)	357, 641, 774, 974, 1072
EcoT38I	GRGCYC	2 cut(s)	114, 1107
ErhI	CCWWGG	5 cut(s)	357, 641, 774, 974, 1072
FaqI	GGGAC	1 cut(s)	619
FauI	CCCGC	4 cut(s)	322, 572, 919, 1139
FblI	GTMKAC	1 cut(s)	996
FokI	GGATG	9 cut(s)	104, 296, 487, 730, 735, 945, 1151, 1221, 1344
FriOI	GRGCYC	2 cut(s)	114, 1107
FspBI	CTAG	2 cut(s)	642, 1073
GlaI	GCGC	3 cut(s)	802, 831, 1119
GsaI	CCCAGC	2 cut(s)	208, 452
GsuI	CTGGAG	1 cut(s)	80
HaeII	RGCGCY	1 cut(s)	833
HapII	CCGG	8 cut(s)	35, 107, 267, 576, 729, 1065, 1089, 1274
HgaI	GACGC	1 cut(s)	1030
HhaI	GCGC	3 cut(s)	803, 832, 1120
Hin1I	GRCGYC	1 cut(s)	1041
Hin6I	GCGC	3 cut(s)	801, 830, 1118
HinP1I	GCGC	3 cut(s)	801, 830, 1118
HincII	GTYRAC	1 cut(s)	1027
HindII	GTYRAC	1 cut(s)	1027
HinfI	GANTC	4 cut(s)	666, 811, 1011, 1068
HpaII	CCGG	8 cut(s)	35, 107, 267, 576, 729, 1065, 1089, 1274
HphI	GGTGA	5 cut(s)	65, 220, 973, 1234, 1349
Hpy166II	GTNNAC	7 cut(s)	157, 394, 510, 825, 981, 997, 1027
Hpy188I	TCNGA	2 cut(s)	869, 1208
Hpy188III	TCNNGA	5 cut(s)	97, 196, 347, 349, 1135
Hpy8I	GTNNAC	7 cut(s)	157, 394, 510, 825, 981, 997, 1027
Hpy99I	CGWCG	3 cut(s)	518, 902, 1046
HpyAV	CCTTC	3 cut(s)	193, 511, 1371
HpyCH4III	ACNGT	2 cut(s)	432, 514
HpyCH4IV	ACGT	4 cut(s)	212, 585, 681, 1387
HpyCH4V	TGCA	5 cut(s)	405, 649, 917, 1129, 1309
HpyF3I	CTNAG	2 cut(s)	277, 1395
HpySE526I	ACGT	4 cut(s)	212, 585, 681, 1387
Hsp92I	GRCGYC	1 cut(s)	1041
HspAI	GCGC	3 cut(s)	801, 830, 1118
KpnI	GGTACC	1 cut(s)	376
KroI	GCCGGC	1 cut(s)	575
KroNI	GCCGGC	1 cut(s)	577
Kzo9I	GATC	5 cut(s)	198, 343, 745, 990, 1354
LguI	GCTCTTC	1 cut(s)	1127
LmnI	GCTCC	7 cut(s)	26, 129, 701, 869, 1279, 1345, 1405
Lsp1109I	GCAGC	9 cut(s)	231, 234, 292, 672, 901, 950, 978, 1177, 1199
LweI	GCATC	2 cut(s)	1101, 1173
MaeI	CTAG	2 cut(s)	642, 1073
MaeII	ACGT	4 cut(s)	212, 585, 681, 1387
MaeIII	GTNAC	4 cut(s)	53, 208, 1132, 1222
MalI	GATC	5 cut(s)	200, 345, 747, 992, 1356
MboI	GATC	5 cut(s)	198, 343, 745, 990, 1354
MboII	GAAGA	7 cut(s)	151, 154, 591, 835, 838, 1114, 1328
MflI	RGATCY	1 cut(s)	745
MhlI	GDGCHC	2 cut(s)	114, 1107
MlsI	TGGCCA	1 cut(s)	362
MluCI	AATT	1 cut(s)	1245
MluNI	TGGCCA	1 cut(s)	362
MlyI	GAGTC	2 cut(s)	820, 1005
Mox20I	TGGCCA	1 cut(s)	362
MreI	CGCCGGCG	1 cut(s)	575
MroNI	GCCGGC	1 cut(s)	575
MscI	TGGCCA	1 cut(s)	362
MseI	TTAA	1 cut(s)	1016
MslI	CAYNNNNRTG	5 cut(s)	86, 986, 1169, 1220, 1238
Msp20I	TGGCCA	1 cut(s)	362
MspA1I	CMGCKG	3 cut(s)	611, 914, 1190
MspI	CCGG	8 cut(s)	35, 107, 267, 576, 729, 1065, 1089, 1274
MspR9I	CCNGG	4 cut(s)	35, 108, 268, 878
MvaI	CCWGG	1 cut(s)	878
MvnI	CGCG	1 cut(s)	1146
NaeI	GCCGGC	1 cut(s)	577
NciI	CCSGG	3 cut(s)	35, 108, 268
NcoI	CCATGG	3 cut(s)	357, 774, 974
NdeII	GATC	5 cut(s)	198, 343, 745, 990, 1354
NgoMIV	GCCGGC	1 cut(s)	575
NlaIV	GGNNCC	4 cut(s)	374, 607, 1260, 1401
NmeAIII	GCCGAG	2 cut(s)	1017, 1126
NmuCI	GTSAC	4 cut(s)	53, 208, 1132, 1222
NspI	RCATGY	3 cut(s)	409, 532, 1273
OliI	CACNNNNGTG	1 cut(s)	86
PaeI	GCATGC	1 cut(s)	1273
PaeR7I	CTCGAG	1 cut(s)	347
PceI	AGGCCT	1 cut(s)	1322
PciSI	GCTCTTC	1 cut(s)	1127
PcsI	WCGNNNNNNNCGW	2 cut(s)	339, 345
PdiI	GCCGGC	1 cut(s)	577
PfeI	GAWTC	2 cut(s)	666, 1068
PflMI	CCANNNNNTGG	2 cut(s)	369, 1060
PleI	GAGTC	2 cut(s)	819, 1005
PpsI	GAGTC	2 cut(s)	819, 1005
PpuMI	RGGWCCY	1 cut(s)	638
PsiI	TTATAA	1 cut(s)	1373
Psp5II	RGGWCCY	1 cut(s)	638
Psp6I	CCWGG	1 cut(s)	876
PspEI	GGTNACC	1 cut(s)	1222
PspFI	CCCAGC	2 cut(s)	204, 448
PspGI	CCWGG	1 cut(s)	876
PspN4I	GGNNCC	4 cut(s)	374, 607, 1260, 1401
PspPI	GGNCC	6 cut(s)	172, 216, 269, 606, 638, 726
PspPPI	RGGWCCY	1 cut(s)	638
PstI	CTGCAG	1 cut(s)	919
PsuI	RGATCY	1 cut(s)	745
PvuII	CAGCTG	1 cut(s)	1190
RsaI	GTAC	6 cut(s)	374, 395, 509, 584, 927, 1352
RsaNI	GTAC	6 cut(s)	373, 394, 508, 583, 926, 1351
RseI	CAYNNNNRTG	5 cut(s)	86, 986, 1169, 1220, 1238
SapI	GCTCTTC	1 cut(s)	1127
SaqAI	TTAA	1 cut(s)	1016
Sau3AI	GATC	5 cut(s)	198, 343, 745, 990, 1354
Sau96I	GGNCC	6 cut(s)	172, 216, 269, 606, 638, 726
SchI	GAGTC	2 cut(s)	820, 1005
ScrFI	CCNGG	4 cut(s)	35, 108, 268, 878
SduI	GDGCHC	2 cut(s)	114, 1107
SfaNI	GCATC	2 cut(s)	1101, 1173
SfcI	CTRYAG	1 cut(s)	915
Sfr274I	CTCGAG	1 cut(s)	347
SgrAI	CRCCGGYG	1 cut(s)	575
SinI	GGWCC	2 cut(s)	606, 638
SlaI	CTCGAG	1 cut(s)	347
SmiMI	CAYNNNNRTG	5 cut(s)	86, 986, 1169, 1220, 1238
SmlI	CTYRAG	2 cut(s)	296, 347
SmoI	CTYRAG	2 cut(s)	296, 347
SphI	GCATGC	1 cut(s)	1273
Sse9I	AATT	1 cut(s)	1245
SseBI	AGGCCT	1 cut(s)	1322
SspMI	CTAG	2 cut(s)	642, 1073
StuI	AGGCCT	1 cut(s)	1322
StyD4I	CCNGG	4 cut(s)	33, 106, 266, 876
StyI	CCWWGG	5 cut(s)	357, 641, 774, 974, 1072
TaaI	ACNGT	2 cut(s)	432, 514
TaiI	ACGT	4 cut(s)	215, 588, 684, 1390
TaqI	TCGA	2 cut(s)	348, 834
TasI	AATT	1 cut(s)	1245
TatI	WGTACW	2 cut(s)	393, 925
TauI	GCSGC	6 cut(s)	8, 191, 416, 758, 806, 1080
TfiI	GAWTC	2 cut(s)	666, 1068
Tru1I	TTAA	1 cut(s)	1016
Tru9I	TTAA	1 cut(s)	1016
TscAI	CASTG	4 cut(s)	407, 628, 1065, 1311
TseFI	GTSAC	4 cut(s)	53, 208, 1132, 1222
TseI	GCWGC	9 cut(s)	244, 247, 305, 685, 914, 938, 966, 1187, 1190
Tsp45I	GTSAC	4 cut(s)	53, 208, 1132, 1222
TspDTI	ATGAA	6 cut(s)	157, 473, 542, 581, 607, 1189
TspGWI	ACGGA	3 cut(s)	738, 850, 1398
TspRI	CASTG	4 cut(s)	407, 628, 1065, 1311
Van91I	CCANNNNNTGG	2 cut(s)	369, 1060
VpaK11BI	GGWCC	2 cut(s)	606, 638
XagI	CCTNNNNNAGG	1 cut(s)	276
XceI	RCATGY	3 cut(s)	409, 532, 1273
XcmI	CCANNNNNNNNNTGG	1 cut(s)	814
XhoI	CTCGAG	1 cut(s)	347
XmaJI	CCTAGG	2 cut(s)	641, 1072
XmiI	GTMKAC	1 cut(s)	996
XspI	CTAG	2 cut(s)	642, 1073

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.