MD07G1080200.v1.1

Xylulose 5-phosphate phosphate translocator

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
7771402 .. 7772820
1419 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1080200.v1.1.491

Sequence Viewer

Length: 1419 bp
ATGTACTTGCAGAGTCTCTGTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACAACGGCACAACCACAACCAATTGCCACAACACCAAATGCTTACCTTGAATCTCAGTTGTCCTTCTTCCCCTGTCACTTTCTCCAAATCCCGCCATCAACTCCCCCCTATTAATGCCTCCTCCTCCCCTTCCTCATCACTTCTCACCAGAATCCAAACGCACTCATATCCTCTGCCCCAAGAACCCACCTCTTTGAAACCCCAAATATCCTCCAAATTCTCAAGCTTTACCAGAATCCATGGCTACCCATTTGGAATTTCTTCAAAAGAAACAAAACCCATGTGCCAGATTCGAGATTTGAGCTCAAAGATCAGCCATTTGAGCAAAACCTGTGGATTCCCATCTGGGTTTGGAACAAAACCCAAATCCCAAATCCCCAAAGCTGCTTCTGAATCAAATCCAGGAGGAGAAAAGGAAGCCGCAGTATCAAAGCCCAAGGCCACCACCGTCCGGCTCGCGCTTATTTTTGGGCTCTGGTACTTCCAAAACATTGTCTTCAACATCTACAACAAGAAGGTACTGAATGTCTTTCCATTTCCATGGCTTCTCGCATCTTTTCAGCTCTTTGCTGGGTCTGTCTGGATGTTCATTCTCTGGTCTTTGAAGCTCCAACCCCGCCCGAAAATTTCAAAACCTTTCATCGTTGCACTCCTTGGACCTGCATTGTTCCACACTGTAGGCCACATTTCAGCATGTGTCTCCTTCTCTAAGGTGGCTGTTTCTTTCACCCATGTAATCAAATCCTCGGAGCCCGTTTTCTCAGTAGTGTTTTCGTCGTTCCTAGGAGATTCGTACCCGTTACAGGTCTGGCTCTCAATTCTCCCTATTGTAATGGGTTGTGCTCTAGCTGCTATCACTGAGGTGTCATTCAATGTGCAAGGCCTTTGGGGTGCTTTGATTAGCAATGTCGGGTTTGTGTTGAGGAACATTTACTCGAAACGTAGTTTACAGAACTTCAAGGAAGTAGATGGGTTGAATTTGTATGGTTGGATCAGTATAATTTCGTTCTTCTATCTGTTTCCCGCCGCTATTTTCGTTGAAGGGTCTCAATGGGTTCAAGGATATCACAATGCTCTTGCAGCTGTGGGAAAACCATCCACATTGTACATATGGGTGTTGTTATCCGGAGTGTTTTACCATCTCTATAACCAATCGTCGTATCAAGCACTTGACGAAATTAGTCCCTTGACCTTTTCAGTTGGAAACACCATGAAGAGGGTGGTGGTAATCGTATCGACTGTGTTAGTGTTCAGAAATCCAGTTAGACCTCTTAATGCACTTGGCTCCGCCGTTGCAATATTTGGGACTTTCTTGTATTCGCAGGCAACAGCTAAAAAGAAAAAGGGAGGTGAAAAGAAGGATTGA

Protein Analysis

473

Amino Acids

52.12

Weight (kDa)

9.89

Isoelectric Point (pI)

51.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPT PF03151 169 - 458 1.3e-114 Triose-phosphate Transporter family
EamA PF00892 186 - 301 6.7e-06 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 721
AccII CGCG 1 cut(s) 512
AccIII TCCGGA 1 cut(s) 1178
AciI CCGC 6 cut(s) 145, 474, 670, 1077, 1080, 1341
AclWI GGATC 1 cut(s) 1052
AcsI RAATTY 4 cut(s) 269, 309, 678, 1030
AfaI GTAC 5 cut(s) 5, 533, 573, 848, 1160
AfiI CCNNNNNNNGG 3 cut(s) 504, 856, 1269
AjnI CCWGG 1 cut(s) 454
AleI CACNNNNGTG 1 cut(s) 914
AluBI AGCT 8 cut(s) 279, 357, 437, 616, 661, 902, 1136, 1385
AluI AGCT 8 cut(s) 279, 357, 437, 616, 661, 902, 1136, 1385
Alw21I GWGCWC 2 cut(s) 359, 898
Alw26I GTCTC 3 cut(s) 20, 757, 1104
AlwI GGATC 1 cut(s) 1052
Aor13HI TCCGGA 1 cut(s) 1178
AoxI GGCC 3 cut(s) 492, 733, 934
ApeKI GCWGC 3 cut(s) 437, 902, 1133
ApoI RAATTY 4 cut(s) 269, 309, 678, 1030
AseI ATTAAT 1 cut(s) 165
Asp700I GAANNNNTTC 1 cut(s) 313
AspA2I CCTAGG 1 cut(s) 835
AspLEI GCGC 1 cut(s) 514
AspS9I GGNCC 1 cut(s) 710
AsuHPI GGTGA 3 cut(s) 190, 772, 1415
AvaII GGWCC 1 cut(s) 710
AvrII CCTAGG 1 cut(s) 835
BanII GRGCYC 3 cut(s) 359, 528, 807
BbsI GAAGAC 1 cut(s) 541
Bbv12I GWGCWC 2 cut(s) 359, 898
BbvI GCAGC 3 cut(s) 424, 889, 1145
BccI CCATC 5 cut(s) 156, 403, 1016, 1156, 1200
BceAI ACGGC 2 cut(s) 74, 1328
BciT130I CCWGG 1 cut(s) 456
BcoDI GTCTC 3 cut(s) 20, 757, 1104
BfaI CTAG 2 cut(s) 836, 899
BfmI CTRYAG 1 cut(s) 729
BfuAI ACCTGC 1 cut(s) 721
BisI GCNGC 5 cut(s) 438, 474, 903, 1080, 1134
BlnI CCTAGG 1 cut(s) 835
BlsI GCNGC 5 cut(s) 439, 475, 904, 1081, 1135
Bme1390I CCNGG 1 cut(s) 456
Bme18I GGWCC 1 cut(s) 710
BmgT120I GGNCC 1 cut(s) 710
BmiI GGNNCC 2 cut(s) 804, 1339
BmrFI CCNGG 1 cut(s) 456
BmsI GCATC 1 cut(s) 614
BpiI GAAGAC 1 cut(s) 541
BpuEI CTTGAG 1 cut(s) 259
BsaBI GATNNNNATC 1 cut(s) 394
BsaI GGTCTC 1 cut(s) 1104
BsaJI CCNNGG 6 cut(s) 292, 489, 593, 706, 798, 835
BsaWI WCCGGW 1 cut(s) 1178
Bsc4I CCNNNNNNNGG 3 cut(s) 504, 856, 1269
Bse1I ACTGG 1 cut(s) 1313
Bse3DI GCAATG 1 cut(s) 964
Bse8I GATNNNNATC 1 cut(s) 394
BseAI TCCGGA 1 cut(s) 1178
BseBI CCWGG 1 cut(s) 456
BseDI CCNNGG 6 cut(s) 292, 489, 593, 706, 798, 835
BseGI GGATG 2 cut(s) 642, 1148
BseJI GATNNNNATC 1 cut(s) 394
BseLI CCNNNNNNNGG 3 cut(s) 504, 856, 1269
BseMI GCAATG 1 cut(s) 964
BseMII CTCAG 3 cut(s) 121, 828, 903
BseNI ACTGG 1 cut(s) 1313
BseRI GAGGAG 3 cut(s) 163, 166, 474
BseXI GCAGC 3 cut(s) 424, 889, 1145
BseYI CCCAGC 1 cut(s) 623
Bsh1236I CGCG 1 cut(s) 512
BshFI GGCC 3 cut(s) 494, 735, 936
BsiHKAI GWGCWC 2 cut(s) 359, 898
BsiSI CCGG 2 cut(s) 505, 1179
BslFI GGGAC 2 cut(s) 1221, 1372
BslI CCNNNNNNNGG 3 cut(s) 504, 856, 1269
BsmAI GTCTC 3 cut(s) 20, 757, 1104
BsmFI GGGAC 2 cut(s) 1221, 1372
BsnI GGCC 3 cut(s) 494, 735, 936
Bso31I GGTCTC 1 cut(s) 1104
Bsp1286I GDGCHC 4 cut(s) 359, 528, 807, 898
Bsp13I TCCGGA 1 cut(s) 1178
Bsp1407I TGTACA 1 cut(s) 1158
Bsp143I GATC 2 cut(s) 363, 1044
Bsp19I CCATGG 2 cut(s) 292, 593
BspACI CCGC 6 cut(s) 145, 474, 670, 1077, 1080, 1341
BspANI GGCC 3 cut(s) 494, 735, 936
BspCNI CTCAG 3 cut(s) 120, 827, 904
BspEI TCCGGA 1 cut(s) 1178
BspFNI CGCG 1 cut(s) 512
BspLI GGNNCC 2 cut(s) 804, 1339
BspMI ACCTGC 1 cut(s) 721
BspPI GGATC 1 cut(s) 1052
BspTNI GGTCTC 1 cut(s) 1104
BsrDI GCAATG 1 cut(s) 964
BsrGI TGTACA 1 cut(s) 1158
BsrI ACTGG 1 cut(s) 1313
BssECI CCNNGG 6 cut(s) 292, 489, 593, 706, 798, 835
BssMI GATC 2 cut(s) 363, 1044
BssT1I CCWWGG 5 cut(s) 292, 489, 593, 706, 835
Bst2UI CCWGG 1 cut(s) 456
Bst4CI ACNGT 3 cut(s) 502, 730, 1294
Bst6I CTCTTC 1 cut(s) 1262
BstAUI TGTACA 1 cut(s) 1158
BstC8I GCNNGC 2 cut(s) 510, 1377
BstDEI CTNAG 4 cut(s) 107, 762, 814, 912
BstDSI CCRYGG 2 cut(s) 292, 593
BstF5I GGATG 2 cut(s) 642, 1148
BstFNI CGCG 1 cut(s) 512
BstHHI GCGC 1 cut(s) 514
BstKTI GATC 2 cut(s) 366, 1047
BstMAI GTCTC 3 cut(s) 20, 757, 1104
BstMBI GATC 2 cut(s) 363, 1044
BstMWI GCNNNNNNNGC 3 cut(s) 375, 902, 1133
BstNI CCWGG 1 cut(s) 456
BstNSI RCATGY 1 cut(s) 750
BstSCI CCNGG 1 cut(s) 454
BstSFI CTRYAG 1 cut(s) 729
BstUI CGCG 1 cut(s) 512
BstV1I GCAGC 3 cut(s) 424, 889, 1145
BstV2I GAAGAC 1 cut(s) 541
BstXI CCANNNNNNTGG 1 cut(s) 594
BsuRI GGCC 3 cut(s) 494, 735, 936
BtgI CCRYGG 2 cut(s) 292, 593
BtsCI GGATG 2 cut(s) 642, 1148
BtsIMutI CAGTG 2 cut(s) 726, 909
BveI ACCTGC 1 cut(s) 721
Cac8I GCNNGC 2 cut(s) 510, 1377
CfoI GCGC 1 cut(s) 514
Cfr13I GGNCC 1 cut(s) 710
Csp6I GTAC 5 cut(s) 4, 532, 572, 847, 1159
CspCI CAANNNNNGTGG 2 cut(s) 367, 402
CviAII CATG 6 cut(s) 293, 334, 594, 747, 785, 1264
CviQI GTAC 5 cut(s) 4, 532, 572, 847, 1159
DdeI CTNAG 4 cut(s) 107, 762, 814, 912
DpnI GATC 2 cut(s) 365, 1046
DpnII GATC 2 cut(s) 363, 1044
Eam1104I CTCTTC 1 cut(s) 1262
EarI CTCTTC 1 cut(s) 1262
EciI GGCGGA 1 cut(s) 1330
Ecl136II GAGCTC 1 cut(s) 357
Eco130I CCWWGG 5 cut(s) 292, 489, 593, 706, 835
Eco147I AGGCCT 1 cut(s) 936
Eco24I GRGCYC 3 cut(s) 359, 528, 807
Eco31I GGTCTC 1 cut(s) 1104
Eco32I GATATC 1 cut(s) 1118
Eco47I GGWCC 1 cut(s) 710
Eco53kI GAGCTC 1 cut(s) 357
EcoICRI GAGCTC 1 cut(s) 357
EcoRII CCWGG 1 cut(s) 454
EcoRV GATATC 1 cut(s) 1118
EcoT14I CCWWGG 5 cut(s) 292, 489, 593, 706, 835
EcoT38I GRGCYC 3 cut(s) 359, 528, 807
ErhI CCWWGG 5 cut(s) 292, 489, 593, 706, 835
FaeI CATG 6 cut(s) 296, 337, 597, 750, 788, 1267
FaqI GGGAC 2 cut(s) 1221, 1372
FatI CATG 6 cut(s) 292, 333, 593, 746, 784, 1263
FauI CCCGC 3 cut(s) 152, 677, 1084
FauNDI CATATG 1 cut(s) 1163
Fnu4HI GCNGC 5 cut(s) 438, 474, 903, 1080, 1134
FokI GGATG 2 cut(s) 649, 1135
FriOI GRGCYC 3 cut(s) 359, 528, 807
Fsp4HI GCNGC 5 cut(s) 438, 474, 903, 1080, 1134
FspBI CTAG 2 cut(s) 836, 899
GlaI GCGC 1 cut(s) 513
GluI GCNGC 5 cut(s) 438, 474, 903, 1080, 1134
GsaI CCCAGC 1 cut(s) 627
HaeIII GGCC 3 cut(s) 494, 735, 936
HapII CCGG 2 cut(s) 505, 1179
HhaI GCGC 1 cut(s) 514
Hin1II CATG 6 cut(s) 296, 337, 597, 750, 788, 1267
Hin6I GCGC 1 cut(s) 512
HinP1I GCGC 1 cut(s) 512
HindIII AAGCTT 1 cut(s) 277
HinfI GANTC 8 cut(s) 13, 103, 204, 288, 343, 390, 446, 842
HpaII CCGG 2 cut(s) 505, 1179
HphI GGTGA 3 cut(s) 190, 772, 1415
Hpy166II GTNNAC 1 cut(s) 1001
Hpy188I TCNGA 3 cut(s) 445, 802, 1307
Hpy188III TCNNGA 3 cut(s) 347, 634, 1179
Hpy8I GTNNAC 1 cut(s) 1001
Hpy99I CGWCG 2 cut(s) 832, 1213
HpyAV CCTTC 7 cut(s) 33, 126, 192, 562, 766, 1088, 1405
HpyCH4III ACNGT 3 cut(s) 502, 730, 1294
HpyCH4IV ACGT 1 cut(s) 994
HpyCH4V TGCA 7 cut(s) 10, 701, 716, 931, 1133, 1331, 1349
HpyF10VI GCNNNNNNNGC 3 cut(s) 375, 902, 1133
HpyF3I CTNAG 4 cut(s) 107, 762, 814, 912
HpySE526I ACGT 1 cut(s) 994
Hsp92II CATG 6 cut(s) 296, 337, 597, 750, 788, 1267
HspAI GCGC 1 cut(s) 512
Kpn2I TCCGGA 1 cut(s) 1178
Kzo9I GATC 2 cut(s) 363, 1044
LmnI GCTCC 3 cut(s) 666, 802, 1343
Lsp1109I GCAGC 3 cut(s) 424, 889, 1145
LweI GCATC 1 cut(s) 614
MaeI CTAG 2 cut(s) 836, 899
MaeII ACGT 1 cut(s) 994
MaeIII GTNAC 2 cut(s) 127, 852
MalI GATC 2 cut(s) 365, 1046
MboI GATC 2 cut(s) 363, 1044
MboII GAAGA 5 cut(s) 111, 306, 541, 1054, 1279
MfeI CAATTG 1 cut(s) 74
MhlI GDGCHC 4 cut(s) 359, 528, 807, 898
MluCI AATT 8 cut(s) 74, 269, 309, 678, 870, 1030, 1053, 1230
MlyI GAGTC 1 cut(s) 22
MmeI TCCRAC 3 cut(s) 688, 1022, 1234
MroI TCCGGA 1 cut(s) 1178
MroXI GAANNNNTTC 1 cut(s) 313
MseI TTAA 2 cut(s) 165, 1326
MslI CAYNNNNRTG 3 cut(s) 592, 914, 1166
MspA1I CMGCKG 1 cut(s) 1136
MspI CCGG 2 cut(s) 505, 1179
MspR9I CCNGG 1 cut(s) 456
MunI CAATTG 1 cut(s) 74
MvaI CCWGG 1 cut(s) 456
MvnI CGCG 1 cut(s) 512
MwoI GCNNNNNNNGC 3 cut(s) 375, 902, 1133
NcoI CCATGG 2 cut(s) 292, 593
NdeI CATATG 1 cut(s) 1163
NdeII GATC 2 cut(s) 363, 1044
NlaIII CATG 6 cut(s) 296, 337, 597, 750, 788, 1267
NlaIV GGNNCC 2 cut(s) 804, 1339
NmuCI GTSAC 1 cut(s) 127
NspI RCATGY 1 cut(s) 750
OliI CACNNNNGTG 1 cut(s) 914
PceI AGGCCT 1 cut(s) 936
PdmI GAANNNNTTC 1 cut(s) 313
PfeI GAWTC 7 cut(s) 103, 204, 288, 343, 390, 446, 842
PfoI TCCNGGA 1 cut(s) 454
PkrI GCNGC 5 cut(s) 439, 475, 904, 1081, 1135
PleI GAGTC 1 cut(s) 21
PpsI GAGTC 1 cut(s) 21
PshBI ATTAAT 1 cut(s) 165
Psp124BI GAGCTC 1 cut(s) 359
Psp6I CCWGG 1 cut(s) 454
PspFI CCCAGC 1 cut(s) 623
PspGI CCWGG 1 cut(s) 454
PspN4I GGNNCC 2 cut(s) 804, 1339
PspPI GGNCC 1 cut(s) 710
PvuII CAGCTG 1 cut(s) 1136
RsaI GTAC 5 cut(s) 5, 533, 573, 848, 1160
RsaNI GTAC 5 cut(s) 4, 532, 572, 847, 1159
RseI CAYNNNNRTG 3 cut(s) 592, 914, 1166
SacI GAGCTC 1 cut(s) 359
SaqAI TTAA 2 cut(s) 165, 1326
SatI GCNGC 5 cut(s) 438, 474, 903, 1080, 1134
Sau3AI GATC 2 cut(s) 363, 1044
Sau96I GGNCC 1 cut(s) 710
SchI GAGTC 1 cut(s) 22
ScrFI CCNGG 1 cut(s) 456
SduI GDGCHC 4 cut(s) 359, 528, 807, 898
SfaNI GCATC 1 cut(s) 614
SfcI CTRYAG 1 cut(s) 729
SinI GGWCC 1 cut(s) 710
SmiMI CAYNNNNRTG 3 cut(s) 592, 914, 1166
SmlI CTYRAG 1 cut(s) 274
SmoI CTYRAG 1 cut(s) 274
Sse9I AATT 8 cut(s) 74, 269, 309, 678, 870, 1030, 1053, 1230
SseBI AGGCCT 1 cut(s) 936
SsiI CCGC 6 cut(s) 145, 474, 670, 1077, 1080, 1341
SspI AATATT 1 cut(s) 1353
SspMI CTAG 2 cut(s) 836, 899
SstI GAGCTC 1 cut(s) 359
StuI AGGCCT 1 cut(s) 936
StyD4I CCNGG 1 cut(s) 454
StyI CCWWGG 5 cut(s) 292, 489, 593, 706, 835
TaaI ACNGT 3 cut(s) 502, 730, 1294
TaiI ACGT 1 cut(s) 997
TaqI TCGA 3 cut(s) 346, 989, 1289
TasI AATT 8 cut(s) 74, 269, 309, 678, 870, 1030, 1053, 1230
TatI WGTACW 2 cut(s) 3, 1158
TauI GCSGC 2 cut(s) 476, 1082
TfiI GAWTC 7 cut(s) 103, 204, 288, 343, 390, 446, 842
Tru1I TTAA 2 cut(s) 165, 1326
Tru9I TTAA 2 cut(s) 165, 1326
TscAI CASTG 2 cut(s) 733, 916
TseFI GTSAC 1 cut(s) 127
TseI GCWGC 3 cut(s) 437, 902, 1133
Tsp45I GTSAC 1 cut(s) 127
TspDTI ATGAA 3 cut(s) 631, 682, 1280
TspRI CASTG 2 cut(s) 733, 916
VpaK11BI GGWCC 1 cut(s) 710
VspI ATTAAT 1 cut(s) 165
XapI RAATTY 4 cut(s) 269, 309, 678, 1030
XceI RCATGY 1 cut(s) 750
XcmI CCANNNNNNNNNTGG 1 cut(s) 1270
XmaJI CCTAGG 1 cut(s) 835
XmnI GAANNNNTTC 1 cut(s) 313
XspI CTAG 2 cut(s) 836, 899
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.