Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0001669

Physical Location & Seq

Genomic Coordinates Forward (+)

38088126 .. 38092196

Gene Structure 4071 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1292400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1389 bp

ATGGAAAACTTCCATCCACCTTCTGTCCCCTCTACAACGACCGTAACCTCTACTCACCAGACAAATAATTCGCAGTCCTCCACTTGTGAACCAATGAGCTGTTTGCCTTCAACTACTTGTAGTCCTTCAGCCACTCAGTACAGGTATTACCCGTACCATCAGGCCGGTCTCCCCATGTATCCATTCCTGGGTGGCGCCCAACCGAATATGGTTCTATCCAGAGAACAGGCCAGCCTAGACCGATCCGGATGGATATTGAATGCCCTTATGTCTAAGTCTGCAAGAAACGAGAGAAAGATGGCGAGACAGAGGAGTCTCAATTTGAGCAGAAACGCAGCCAATACTGCTGTTTCTTGTTCTCCCCCAGTGAGTAGGCATCCTCCATTTCATGGGAATCATGATGATGATACATGTGGAATCATTTCCACGTCATCATCTGGTAATGGTGCTGATTTGCAGAACACCAAAGAACAGCTCTACCCGTTCTGCACGCCGGATAACAAGAAACTGAGACCGCTGTTTAACAAGGAGTTGAAGAATAGTGATGTTGGACCTTTGGGCAGGATTATAGTACCGAAGAAAGAAGCCGAAAATAACCTTCCAATGCTCTCCGGCAAAGAAGGCATCCAGCTGACTGTCAGAGATGTACATTCCGACCAGCATTGGGAGTTCAAATACAAGTACTGGTCAAATAACAGAAGCAGAATGTATGTGTTCGAATATACAGGCGCTTTTGTTAGGCAAAAAAGGCTGGAGGCGGGAGATTGCATTTATCTGTACGAGGATGAATGCAAGAACATCTACGTCTACGTAGAAAAGGTGCCAAGACCAGCACGTGTAGCTGAGCCCTCCTCCTCCTCTCAACAGCGTAATACTACGACTAACCATACAGACCAAACTGCCAACATGAACACTAGCCTCGAGGCCAACAATACCGACAACAAAACTCCCAACACCGATGCTAAAACCCATAGAAGTAACCCCTATGTGGCCTCAAACTTGTCTTCACCTTCACCTTCCCCTTCACCATTTACCTATGTAGCTGGCTACGAAGAAGACGAATTATCTCTAGAACTACTTATGGAACAACTTAAGCAAGAGCAAGAAGCTAACGTTTTCGCGGATGCTGTGTCTATGACCTCTGCTTCTTCATCAGCCTATATGGAACATGAGGAAGCTACTACTTTGTCCAACAACATCGCTAATCGCCATATTGAGATATCTACCAAACCACCGTCCACGTTGTCTGCAGGAATCGATCCTTCATCGTCATCATCTTCACAGAGTAGAGCAATGGTGAGGATGGTAAATGATGATCAGCCTGAGTTCGATGACTGCTACAAAGGCCTTGGGACGCTCCCAGAAGTCGACCACTACAAGTACGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009891 GO:0009893 GO:0010154 GO:0010262 GO:0010344 GO:0010431 GO:0010468 GO:0010556 GO:0010557 GO:0010600 GO:0010601 GO:0010604 GO:0010628 GO:0010817 GO:0019219 GO:0019222 GO:0021700 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0032504 GO:0044085 GO:0045893 GO:0045935 GO:0046885 GO:0046886 GO:0048316 GO:0048518 GO:0048522 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0061458 GO:0065007 GO:0065008 GO:0071695 GO:0071840 GO:0080090 GO:0090354 GO:0090355 GO:0097159 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

463

Amino Acids

51.51

Weight (kDa)

5.93

Isoelectric Point (pI)

61.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	174 - 271	3.4e-12	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001669)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28300
fragaria_vesca	FvH4_3g08960 FvH4_3g21641 FvH4_5g20960
malus_domestica	MD00G1115600.v1.1 MD10G1292400.v1.1
prunus_persica	Prupe.4G049500_v2.0.a1 Prupe.4G049500_v2.0.a1 Prupe.4G049500_v2.0.a1
pyrus_communis	pycom05g28900 pycom10g24450
rosa_chinensis	RchiOBHm_Chr5g0008771 RchiOBHm_Chr5g0008831 RchiOBHm_Chr5g0037101
rosa_laevigata	RLG00000031603 RLG00000033751
rosa_multiflora	Rmu_sc0001473.1_g000032 Rmu_sc0018628.1_g000002
rosa_roxburghii	Rroxscaffold_1G00043860 Rroxscaffold_1G00067180 Rroxscaffold_1G00067220 Rroxscaffold_1G00067780 Rroxscaffold_1G00067820
rosa_rugosa	Rorug04G0439000 Rorug04G0439000 Rorug04G0439000 Rorug04G0439500 Rorug04G0439500 Rorug04G0439500 Rorug04G0439600 Rorug04G0439600 Rorug05G0160700
rosa_samantha	Rh5AG067400 Rh5AG067700 Rh5AG252600 Rh5BG064300 Rh5BG064700 Rh5BG254400 Rh5CG075200 Rh5CG075600 Rh5CG075700 Rh5CG286900 Rh5DG061100 Rh5DG061200 Rh5DG061500 Rh5DG262800
rosa_wichuraiana	Rw5G005090 Rw5G006360 Rw5G023300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	312
AbsI	CCTCGAGG	1 cut(s)	920
AccB1I	GGYRCC	2 cut(s)	194, 820
AccB7I	CCANNNNNTGG	1 cut(s)	389
AccI	GTMKAC	2 cut(s)	807, 1368
AccII	CGCG	1 cut(s)	1121
AccIII	TCCGGA	1 cut(s)	245
AciI	CCGC	3 cut(s)	515, 758, 1121
AclI	AACGTT	1 cut(s)	1113
AclWI	GGATC	2 cut(s)	237, 1253
AcuI	CTGAAG	1 cut(s)	111
AcvI	CACGTG	1 cut(s)	836
AcyI	GRCGYC	1 cut(s)	195
AfaI	GTAC	7 cut(s)	140, 155, 573, 648, 683, 779, 1382
AfiI	CCNNNNNNNGG	4 cut(s)	188, 389, 664, 988
AflII	CTTAAG	1 cut(s)	1091
AflIII	ACRYGT	3 cut(s)	410, 835, 1383
AgsI	TTSAA	4 cut(s)	111, 259, 535, 673
AjiI	CACGTC	1 cut(s)	429
AjnI	CCWGG	1 cut(s)	186
AluBI	AGCT	7 cut(s)	99, 475, 631, 842, 1043, 1109, 1178
AluI	AGCT	7 cut(s)	99, 475, 631, 842, 1043, 1109, 1178
Alw26I	GTCTC	4 cut(s)	173, 298, 320, 505
AlwI	GGATC	2 cut(s)	237, 1253
Ama87I	CYCGRG	1 cut(s)	920
Aor13HI	TCCGGA	1 cut(s)	245
AoxI	GGCC	5 cut(s)	162, 228, 924, 990, 1345
ApeKI	GCWGC	1 cut(s)	335
ArsI	GACNNNNNNTTYG	2 cut(s)	52, 84
Asp700I	GAANNNNTTC	1 cut(s)	421
AspLEI	GCGC	2 cut(s)	197, 731
AspS9I	GGNCC	1 cut(s)	551
AsuHPI	GGTGA	5 cut(s)	47, 999, 1005, 1017, 1309
AsuII	TTCGAA	1 cut(s)	717
AvaI	CYCGRG	1 cut(s)	920
AvaII	GGWCC	1 cut(s)	551
BanI	GGYRCC	2 cut(s)	194, 820
BanII	GRGCYC	1 cut(s)	849
BbrPI	CACGTG	1 cut(s)	836
BbsI	GAAGAC	2 cut(s)	996, 1062
BbvI	GCAGC	1 cut(s)	347
BccI	CCATC	5 cut(s)	21, 165, 243, 292, 1297
BciT130I	CCWGG	1 cut(s)	188
BciVI	GTATCC	1 cut(s)	189
BclI	TGATCA	1 cut(s)	1315
BcoDI	GTCTC	4 cut(s)	173, 298, 320, 505
BfaI	CTAG	3 cut(s)	236, 915, 1070
BfmI	CTRYAG	1 cut(s)	1248
BfoI	RGCGCY	2 cut(s)	198, 732
BfrI	CTTAAG	1 cut(s)	1091
BfuI	GTATCC	1 cut(s)	189
BisI	GCNGC	1 cut(s)	336
BlpI	GCTNAGC	1 cut(s)	843
BlsI	GCNGC	1 cut(s)	337
BmcAI	AGTACT	1 cut(s)	683
Bme1390I	CCNGG	1 cut(s)	188
Bme18I	GGWCC	1 cut(s)	551
BmeT110I	CYCGRG	1 cut(s)	920
BmgBI	CACGTC	1 cut(s)	429
BmgT120I	GGNCC	1 cut(s)	551
BmiI	GGNNCC	2 cut(s)	196, 822
BmrFI	CCNGG	1 cut(s)	188
BmrI	ACTGGG	1 cut(s)	359
BmsI	GCATC	4 cut(s)	385, 633, 949, 1114
BmuI	ACTGGG	1 cut(s)	359
BpiI	GAAGAC	2 cut(s)	996, 1062
BplI	GAGNNNNNCTC	2 cut(s)	836, 868
BpmI	CTGGAG	1 cut(s)	773
Bpu1102I	GCTNAGC	1 cut(s)	843
Bpu14I	TTCGAA	1 cut(s)	717
Bsa29I	ATCGAT	1 cut(s)	1257
BsaAI	YACGTR	3 cut(s)	811, 836, 1384
BsaHI	GRCGYC	1 cut(s)	195
BsaI	GGTCTC	2 cut(s)	173, 505
BsaJI	CCNNGG	2 cut(s)	187, 1348
BsaWI	WCCGGW	1 cut(s)	245
Bsc4I	CCNNNNNNNGG	4 cut(s)	188, 389, 664, 988
Bse118I	RCCGGY	1 cut(s)	164
Bse1I	ACTGG	2 cut(s)	365, 689
Bse3DI	GCAATG	1 cut(s)	1299
BseAI	TCCGGA	1 cut(s)	245
BseBI	CCWGG	1 cut(s)	188
BseCI	ATCGAT	1 cut(s)	1257
BseDI	CCNNGG	2 cut(s)	187, 1348
BseGI	GGATG	7 cut(s)	13, 254, 376, 624, 790, 1129, 1308
BseLI	CCNNNNNNNGG	4 cut(s)	188, 389, 664, 988
BseMI	GCAATG	1 cut(s)	1299
BseMII	CTCAG	4 cut(s)	149, 500, 834, 1314
BseNI	ACTGG	2 cut(s)	365, 689
BseRI	GAGGAG	4 cut(s)	325, 841, 844, 847
BseXI	GCAGC	1 cut(s)	347
BsgI	GTGCAG	1 cut(s)	472
Bsh1236I	CGCG	1 cut(s)	1121
Bsh1285I	CGRYCG	1 cut(s)	42
BshFI	GGCC	5 cut(s)	164, 230, 926, 992, 1347
BshNI	GGYRCC	2 cut(s)	194, 820
BshVI	ATCGAT	1 cut(s)	1257
BsiEI	CGRYCG	1 cut(s)	42
BsiHKCI	CYCGRG	1 cut(s)	920
BsiSI	CCGG	4 cut(s)	165, 246, 494, 612
BslFI	GGGAC	2 cut(s)	11, 1366
BslI	CCNNNNNNNGG	4 cut(s)	188, 389, 664, 988
BsmAI	GTCTC	4 cut(s)	173, 298, 320, 505
BsmFI	GGGAC	2 cut(s)	11, 1366
BsmI	GAATGC	2 cut(s)	265, 794
BsnI	GGCC	5 cut(s)	164, 230, 926, 992, 1347
Bso31I	GGTCTC	2 cut(s)	173, 505
BsoBI	CYCGRG	1 cut(s)	920
Bsp119I	TTCGAA	1 cut(s)	717
Bsp1286I	GDGCHC	1 cut(s)	849
Bsp13I	TCCGGA	1 cut(s)	245
Bsp1407I	TGTACA	1 cut(s)	646
Bsp143I	GATC	3 cut(s)	242, 1258, 1315
Bsp1720I	GCTNAGC	1 cut(s)	843
BspACI	CCGC	3 cut(s)	515, 758, 1121
BspANI	GGCC	5 cut(s)	164, 230, 926, 992, 1347
BspCNI	CTCAG	4 cut(s)	148, 501, 835, 1315
BspDI	ATCGAT	1 cut(s)	1257
BspEI	TCCGGA	1 cut(s)	245
BspFNI	CGCG	1 cut(s)	1121
BspHI	TCATGA	1 cut(s)	397
BspLI	GGNNCC	2 cut(s)	196, 822
BspMAI	CTGCAG	1 cut(s)	1252
BspPI	GGATC	2 cut(s)	237, 1253
BspT104I	TTCGAA	1 cut(s)	717
BspT107I	GGYRCC	2 cut(s)	194, 820
BspTI	CTTAAG	1 cut(s)	1091
BspTNI	GGTCTC	2 cut(s)	173, 505
BsrDI	GCAATG	1 cut(s)	1299
BsrFI	RCCGGY	1 cut(s)	164
BsrGI	TGTACA	1 cut(s)	646
BsrI	ACTGG	2 cut(s)	365, 689
BssAI	RCCGGY	1 cut(s)	164
BssECI	CCNNGG	2 cut(s)	187, 1348
BssMI	GATC	3 cut(s)	242, 1258, 1315
BssNI	GRCGYC	1 cut(s)	195
BssT1I	CCWWGG	1 cut(s)	1348
Bst2UI	CCWGG	1 cut(s)	188
Bst4CI	ACNGT	3 cut(s)	43, 637, 1236
BstACI	GRCGYC	1 cut(s)	195
BstAFI	CTTAAG	1 cut(s)	1091
BstAUI	TGTACA	1 cut(s)	646
BstBAI	YACGTR	3 cut(s)	811, 836, 1384
BstBI	TTCGAA	1 cut(s)	717
BstC8I	GCNNGC	3 cut(s)	232, 491, 1045
BstDEI	CTNAG	5 cut(s)	135, 273, 509, 843, 1323
BstF5I	GGATG	7 cut(s)	13, 254, 376, 624, 790, 1129, 1308
BstFNI	CGCG	1 cut(s)	1121
BstH2I	RGCGCY	2 cut(s)	198, 732
BstHHI	GCGC	2 cut(s)	197, 731
BstKTI	GATC	3 cut(s)	245, 1261, 1318
BstMAI	GTCTC	4 cut(s)	173, 298, 320, 505
BstMBI	GATC	3 cut(s)	242, 1258, 1315
BstMCI	CGRYCG	1 cut(s)	42
BstMWI	GCNNNNNNNGC	5 cut(s)	344, 621, 748, 839, 1344
BstNI	CCWGG	1 cut(s)	188
BstNSI	RCATGY	1 cut(s)	414
BstSCI	CCNGG	1 cut(s)	186
BstSFI	CTRYAG	1 cut(s)	1248
BstSNI	TACGTA	1 cut(s)	811
BstUI	CGCG	1 cut(s)	1121
BstV1I	GCAGC	1 cut(s)	347
BstV2I	GAAGAC	2 cut(s)	996, 1062
Bsu15I	ATCGAT	1 cut(s)	1257
BsuI	GTATCC	1 cut(s)	189
BsuRI	GGCC	5 cut(s)	164, 230, 926, 992, 1347
BsuTUI	ATCGAT	1 cut(s)	1257
BtgZI	GCGATG	1 cut(s)	1183
BtrI	CACGTC	1 cut(s)	429
BtsCI	GGATG	7 cut(s)	13, 254, 376, 624, 790, 1129, 1308
BtsIMutI	CAGTG	1 cut(s)	372
Cac8I	GCNNGC	3 cut(s)	232, 491, 1045
CciI	TCATGA	1 cut(s)	397
CfoI	GCGC	2 cut(s)	197, 731
Cfr10I	RCCGGY	1 cut(s)	164
Cfr13I	GGNCC	1 cut(s)	551
ClaI	ATCGAT	1 cut(s)	1257
CseI	GACGC	1 cut(s)	1363
Csp6I	GTAC	7 cut(s)	139, 154, 572, 647, 682, 778, 1381
CviAII	CATG	6 cut(s)	175, 389, 398, 411, 907, 1169
CviQI	GTAC	7 cut(s)	139, 154, 572, 647, 682, 778, 1381
DdeI	CTNAG	5 cut(s)	135, 273, 509, 843, 1323
DinI	GGCGCC	1 cut(s)	196
DpnI	GATC	3 cut(s)	244, 1260, 1317
DpnII	GATC	3 cut(s)	242, 1258, 1315
DrdI	GACNNNNNNGTC	1 cut(s)	312
DseDI	GACNNNNNNGTC	1 cut(s)	312
Eco105I	TACGTA	1 cut(s)	811
Eco130I	CCWWGG	1 cut(s)	1348
Eco147I	AGGCCT	1 cut(s)	1347
Eco24I	GRGCYC	1 cut(s)	849
Eco31I	GGTCTC	2 cut(s)	173, 505
Eco32I	GATATC	1 cut(s)	1221
Eco47I	GGWCC	1 cut(s)	551
Eco57I	CTGAAG	1 cut(s)	111
Eco72I	CACGTG	1 cut(s)	836
Eco88I	CYCGRG	1 cut(s)	920
EcoRII	CCWGG	1 cut(s)	186
EcoRV	GATATC	1 cut(s)	1221
EcoT14I	CCWWGG	1 cut(s)	1348
EcoT38I	GRGCYC	1 cut(s)	849
EgeI	GGCGCC	1 cut(s)	196
EheI	GGCGCC	1 cut(s)	196
ErhI	CCWWGG	1 cut(s)	1348
FaeI	CATG	6 cut(s)	178, 392, 401, 414, 910, 1172
FaqI	GGGAC	2 cut(s)	11, 1366
FatI	CATG	6 cut(s)	174, 388, 397, 410, 906, 1168
FauI	CCCGC	1 cut(s)	751
FbaI	TGATCA	1 cut(s)	1315
FblI	GTMKAC	2 cut(s)	807, 1368
Fnu4HI	GCNGC	1 cut(s)	336
FokI	GGATG	6 cut(s)	261, 363, 611, 797, 1136, 1315
FriOI	GRGCYC	1 cut(s)	849
Fsp4HI	GCNGC	1 cut(s)	336
FspBI	CTAG	3 cut(s)	236, 915, 1070
GlaI	GCGC	2 cut(s)	196, 730
GluI	GCNGC	1 cut(s)	336
GsuI	CTGGAG	1 cut(s)	773
HaeII	RGCGCY	2 cut(s)	198, 732
HaeIII	GGCC	5 cut(s)	164, 230, 926, 992, 1347
HapII	CCGG	4 cut(s)	165, 246, 494, 612
HgaI	GACGC	1 cut(s)	1363
HhaI	GCGC	2 cut(s)	197, 731
Hin1I	GRCGYC	1 cut(s)	195
Hin1II	CATG	6 cut(s)	178, 392, 401, 414, 910, 1172
Hin6I	GCGC	2 cut(s)	195, 729
HinP1I	GCGC	2 cut(s)	195, 729
HincII	GTYRAC	1 cut(s)	1369
HindII	GTYRAC	1 cut(s)	1369
HinfI	GANTC	4 cut(s)	313, 394, 417, 1254
HpaII	CCGG	4 cut(s)	165, 246, 494, 612
HphI	GGTGA	5 cut(s)	47, 999, 1005, 1017, 1309
Hpy166II	GTNNAC	4 cut(s)	89, 808, 1239, 1369
Hpy188I	TCNGA	2 cut(s)	641, 655
Hpy188III	TCNNGA	4 cut(s)	219, 246, 398, 1070
Hpy8I	GTNNAC	4 cut(s)	89, 808, 1239, 1369
HpyAV	CCTTC	9 cut(s)	30, 117, 135, 608, 614, 1020, 1026, 1032, 1272
HpyCH4III	ACNGT	3 cut(s)	43, 637, 1236
HpyCH4IV	ACGT	7 cut(s)	428, 804, 810, 835, 1113, 1241, 1383
HpyCH4V	TGCA	6 cut(s)	281, 457, 489, 768, 792, 1250
HpyF10VI	GCNNNNNNNGC	5 cut(s)	344, 621, 748, 839, 1344
HpyF3I	CTNAG	5 cut(s)	135, 273, 509, 843, 1323
HpySE526I	ACGT	7 cut(s)	428, 804, 810, 835, 1113, 1241, 1383
Hsp92I	GRCGYC	1 cut(s)	195
Hsp92II	CATG	6 cut(s)	178, 392, 401, 414, 910, 1172
HspAI	GCGC	2 cut(s)	195, 729
KasI	GGCGCC	1 cut(s)	194
Kpn2I	TCCGGA	1 cut(s)	245
Ksp22I	TGATCA	1 cut(s)	1315
Kzo9I	GATC	3 cut(s)	242, 1258, 1315
LmnI	GCTCC	1 cut(s)	1362
Lsp1109I	GCAGC	1 cut(s)	347
LweI	GCATC	4 cut(s)	385, 633, 949, 1114
MaeI	CTAG	3 cut(s)	236, 915, 1070
MaeII	ACGT	7 cut(s)	428, 804, 810, 835, 1113, 1241, 1383
MaeIII	GTNAC	2 cut(s)	43, 977
MalI	GATC	3 cut(s)	244, 1260, 1317
MboI	GATC	3 cut(s)	242, 1258, 1315
MboII	GAAGA	7 cut(s)	547, 589, 996, 1064, 1067, 1140, 1269
MhlI	GDGCHC	1 cut(s)	849
MluCI	AATT	3 cut(s)	67, 319, 1061
Mly113I	GGCGCC	1 cut(s)	195
MlyI	GAGTC	1 cut(s)	322
MmeI	TCCRAC	3 cut(s)	529, 678, 1215
MroI	TCCGGA	1 cut(s)	245
MroXI	GAANNNNTTC	1 cut(s)	421
MseI	TTAA	2 cut(s)	522, 1092
MslI	CAYNNNNRTG	1 cut(s)	402
MspA1I	CMGCKG	2 cut(s)	517, 631
MspCI	CTTAAG	1 cut(s)	1091
MspI	CCGG	4 cut(s)	165, 246, 494, 612
MspR9I	CCNGG	1 cut(s)	188
Mva1269I	GAATGC	2 cut(s)	265, 794
MvaI	CCWGG	1 cut(s)	188
MvnI	CGCG	1 cut(s)	1121
MwoI	GCNNNNNNNGC	5 cut(s)	344, 621, 748, 839, 1344
NarI	GGCGCC	1 cut(s)	195
NdeII	GATC	3 cut(s)	242, 1258, 1315
NlaIII	CATG	6 cut(s)	178, 392, 401, 414, 910, 1172
NlaIV	GGNNCC	2 cut(s)	196, 822
NspI	RCATGY	1 cut(s)	414
NspV	TTCGAA	1 cut(s)	717
PaeR7I	CTCGAG	1 cut(s)	920
PagI	TCATGA	1 cut(s)	397
PceI	AGGCCT	1 cut(s)	1347
PciI	ACATGT	1 cut(s)	410
PcsI	WCGNNNNNNNCGW	1 cut(s)	1056
PctI	GAATGC	2 cut(s)	265, 794
PdmI	GAANNNNTTC	1 cut(s)	421
PfeI	GAWTC	3 cut(s)	394, 417, 1254
PflMI	CCANNNNNTGG	1 cut(s)	389
PkrI	GCNGC	1 cut(s)	337
PleI	GAGTC	1 cut(s)	321
PluTI	GGCGCC	1 cut(s)	198
PmaCI	CACGTG	1 cut(s)	836
PmlI	CACGTG	1 cut(s)	836
PpsI	GAGTC	1 cut(s)	321
Ppu21I	YACGTR	3 cut(s)	811, 836, 1384
PscI	ACATGT	1 cut(s)	410
Psp1406I	AACGTT	1 cut(s)	1113
Psp6I	CCWGG	1 cut(s)	186
PspCI	CACGTG	1 cut(s)	836
PspGI	CCWGG	1 cut(s)	186
PspN4I	GGNNCC	2 cut(s)	196, 822
PspPI	GGNCC	1 cut(s)	551
PspXI	VCTCGAGB	1 cut(s)	920
PstI	CTGCAG	1 cut(s)	1252
PvuII	CAGCTG	1 cut(s)	631
RsaI	GTAC	7 cut(s)	140, 155, 573, 648, 683, 779, 1382
RsaNI	GTAC	7 cut(s)	139, 154, 572, 647, 682, 778, 1381
RseI	CAYNNNNRTG	1 cut(s)	402
SalI	GTCGAC	1 cut(s)	1367
SaqAI	TTAA	2 cut(s)	522, 1092
SatI	GCNGC	1 cut(s)	336
Sau3AI	GATC	3 cut(s)	242, 1258, 1315
Sau96I	GGNCC	1 cut(s)	551
ScaI	AGTACT	1 cut(s)	683
SchI	GAGTC	1 cut(s)	322
ScrFI	CCNGG	1 cut(s)	188
SduI	GDGCHC	1 cut(s)	849
SfaNI	GCATC	4 cut(s)	385, 633, 949, 1114
SfcI	CTRYAG	1 cut(s)	1248
SfoI	GGCGCC	1 cut(s)	196
Sfr274I	CTCGAG	1 cut(s)	920
SfuI	TTCGAA	1 cut(s)	717
SinI	GGWCC	1 cut(s)	551
SlaI	CTCGAG	1 cut(s)	920
SmiMI	CAYNNNNRTG	1 cut(s)	402
SmlI	CTYRAG	2 cut(s)	920, 1091
SmoI	CTYRAG	2 cut(s)	920, 1091
SnaBI	TACGTA	1 cut(s)	811
Sse9I	AATT	3 cut(s)	67, 319, 1061
SseBI	AGGCCT	1 cut(s)	1347
SsiI	CCGC	3 cut(s)	515, 758, 1121
SspDI	GGCGCC	1 cut(s)	194
SspMI	CTAG	3 cut(s)	236, 915, 1070
StuI	AGGCCT	1 cut(s)	1347
StyD4I	CCNGG	1 cut(s)	186
StyI	CCWWGG	1 cut(s)	1348
TaaI	ACNGT	3 cut(s)	43, 637, 1236
TaiI	ACGT	7 cut(s)	431, 807, 813, 838, 1116, 1244, 1386
TaqI	TCGA	5 cut(s)	717, 921, 1257, 1329, 1368
TaqII	GACCGA	1 cut(s)	255
TasI	AATT	3 cut(s)	67, 319, 1061
TatI	WGTACW	3 cut(s)	138, 646, 681
TfiI	GAWTC	3 cut(s)	394, 417, 1254
Tru1I	TTAA	2 cut(s)	522, 1092
Tru9I	TTAA	2 cut(s)	522, 1092
TscAI	CASTG	1 cut(s)	372
TseI	GCWGC	1 cut(s)	335
TspDTI	ATGAA	5 cut(s)	377, 801, 923, 1140, 1254
TspRI	CASTG	1 cut(s)	372
Van91I	CCANNNNNTGG	1 cut(s)	389
Vha464I	CTTAAG	1 cut(s)	1091
VpaK11BI	GGWCC	1 cut(s)	551
XbaI	TCTAGA	1 cut(s)	1069
XceI	RCATGY	1 cut(s)	414
XhoI	CTCGAG	1 cut(s)	920
XmiI	GTMKAC	2 cut(s)	807, 1368
XmnI	GAANNNNTTC	1 cut(s)	421
XspI	CTAG	3 cut(s)	236, 915, 1070
ZrmI	AGTACT	1 cut(s)	683

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.