B3 domain-containing transcription factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TPX2 | PF06886 | 458 - 526 | 1e-09 | Targeting protein for Xklp2 (TPX2) domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 537, 872 |
| AclWI | GGATC | 2 cut(s) | 296, 966 |
| AcsI | RAATTY | 1 cut(s) | 844 |
| AcuI | CTGAAG | 2 cut(s) | 698, 1221 |
| AfaI | GTAC | 5 cut(s) | 61, 164, 352, 439, 1579 |
| AflII | CTTAAG | 1 cut(s) | 1520 |
| AflIII | ACRYGT | 1 cut(s) | 1065 |
| AgsI | TTSAA | 6 cut(s) | 227, 1081, 1183, 1193, 1213, 1528 |
| AhlI | ACTAGT | 1 cut(s) | 386 |
| AjnI | CCWGG | 1 cut(s) | 193 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 928, 960, 1531, 1563 |
| Alw21I | GWGCWC | 3 cut(s) | 394, 1016, 1462 |
| AlwI | GGATC | 2 cut(s) | 296, 966 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1112 |
| AoxI | GGCC | 3 cut(s) | 768, 987, 1375 |
| ApeKI | GCWGC | 3 cut(s) | 248, 1249, 1358 |
| ApoI | RAATTY | 1 cut(s) | 844 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1611 |
| AspS9I | GGNCC | 1 cut(s) | 1595 |
| AsuHPI | GGTGA | 3 cut(s) | 17, 780, 1166 |
| AvaII | GGWCC | 1 cut(s) | 1595 |
| BanII | GRGCYC | 1 cut(s) | 414 |
| BbsI | GAAGAC | 1 cut(s) | 560 |
| Bbv12I | GWGCWC | 3 cut(s) | 394, 1016, 1462 |
| BbvI | GCAGC | 3 cut(s) | 235, 1261, 1345 |
| BccI | CCATC | 3 cut(s) | 37, 617, 1372 |
| BciT130I | CCWGG | 1 cut(s) | 195 |
| BclI | TGATCA | 1 cut(s) | 319 |
| BcuI | ACTAGT | 1 cut(s) | 386 |
| BfaI | CTAG | 8 cut(s) | 387, 822, 855, 888, 921, 1008, 1125, 1583 |
| BfmI | CTRYAG | 2 cut(s) | 905, 1104 |
| BfrI | CTTAAG | 1 cut(s) | 1520 |
| BglII | AGATCT | 3 cut(s) | 339, 451, 722 |
| BisI | GCNGC | 3 cut(s) | 249, 1250, 1359 |
| BlsI | GCNGC | 3 cut(s) | 250, 1251, 1360 |
| BmcAI | AGTACT | 3 cut(s) | 164, 439, 1579 |
| Bme1390I | CCNGG | 1 cut(s) | 195 |
| Bme18I | GGWCC | 1 cut(s) | 1595 |
| BmgT120I | GGNCC | 1 cut(s) | 1595 |
| BmiI | GGNNCC | 1 cut(s) | 1596 |
| BmrFI | CCNGG | 1 cut(s) | 195 |
| BmsI | GCATC | 1 cut(s) | 22 |
| BpiI | GAAGAC | 1 cut(s) | 560 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 424, 456, 1305, 1337 |
| BpmI | CTGGAG | 3 cut(s) | 663, 723, 1332 |
| BpuEI | CTTGAG | 3 cut(s) | 378, 440, 609 |
| Bsa29I | ATCGAT | 1 cut(s) | 503 |
| BsaBI | GATNNNNATC | 2 cut(s) | 300, 1551 |
| BsaJI | CCNNGG | 2 cut(s) | 261, 1353 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 125, 155 |
| Bse1I | ACTGG | 3 cut(s) | 378, 740, 1315 |
| Bse3DI | GCAATG | 1 cut(s) | 679 |
| Bse8I | GATNNNNATC | 2 cut(s) | 300, 1551 |
| BseBI | CCWGG | 1 cut(s) | 195 |
| BseCI | ATCGAT | 1 cut(s) | 503 |
| BseDI | CCNNGG | 2 cut(s) | 261, 1353 |
| BseGI | GGATG | 3 cut(s) | 435, 469, 478 |
| BseJI | GATNNNNATC | 2 cut(s) | 300, 1551 |
| BseMI | GCAATG | 1 cut(s) | 679 |
| BseMII | CTCAG | 6 cut(s) | 221, 740, 821, 990, 1087, 1370 |
| BseNI | ACTGG | 3 cut(s) | 378, 740, 1315 |
| BseRI | GAGGAG | 1 cut(s) | 278 |
| BseXI | GCAGC | 3 cut(s) | 235, 1261, 1345 |
| BsgI | GTGCAG | 2 cut(s) | 948, 1046 |
| BshFI | GGCC | 3 cut(s) | 770, 989, 1377 |
| BshVI | ATCGAT | 1 cut(s) | 503 |
| BsiHKAI | GWGCWC | 3 cut(s) | 394, 1016, 1462 |
| BslFI | GGGAC | 1 cut(s) | 1572 |
| BsmFI | GGGAC | 1 cut(s) | 1572 |
| BsmI | GAATGC | 1 cut(s) | 1178 |
| BsnI | GGCC | 3 cut(s) | 770, 989, 1377 |
| Bsp1286I | GDGCHC | 4 cut(s) | 394, 414, 1016, 1462 |
| Bsp143I | GATC | 8 cut(s) | 301, 319, 334, 339, 451, 709, 722, 971 |
| BspACI | CCGC | 2 cut(s) | 537, 872 |
| BspANI | GGCC | 3 cut(s) | 770, 989, 1377 |
| BspCNI | CTCAG | 6 cut(s) | 220, 739, 820, 989, 1086, 1371 |
| BspDI | ATCGAT | 1 cut(s) | 503 |
| BspLI | GGNNCC | 1 cut(s) | 1596 |
| BspMAI | CTGCAG | 1 cut(s) | 909 |
| BspPI | GGATC | 2 cut(s) | 296, 966 |
| BspTI | CTTAAG | 1 cut(s) | 1520 |
| BsrDI | GCAATG | 1 cut(s) | 679 |
| BsrI | ACTGG | 3 cut(s) | 378, 740, 1315 |
| BssECI | CCNNGG | 2 cut(s) | 261, 1353 |
| BssMI | GATC | 8 cut(s) | 301, 319, 334, 339, 451, 709, 722, 971 |
| BssT1I | CCWWGG | 1 cut(s) | 1353 |
| Bst2UI | CCWGG | 1 cut(s) | 195 |
| Bst4CI | ACNGT | 4 cut(s) | 662, 760, 1114, 1199 |
| Bst6I | CTCTTC | 2 cut(s) | 713, 1221 |
| BstAFI | CTTAAG | 1 cut(s) | 1520 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 962 |
| BstDEI | CTNAG | 8 cut(s) | 207, 726, 807, 976, 1073, 1379, 1508, 1599 |
| BstF5I | GGATG | 3 cut(s) | 435, 469, 478 |
| BstKTI | GATC | 8 cut(s) | 304, 322, 337, 342, 454, 712, 725, 974 |
| BstMBI | GATC | 8 cut(s) | 301, 319, 334, 339, 451, 709, 722, 971 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 257, 962, 1358 |
| BstNI | CCWGG | 1 cut(s) | 195 |
| BstNSI | RCATGY | 1 cut(s) | 1069 |
| BstSCI | CCNGG | 1 cut(s) | 193 |
| BstSFI | CTRYAG | 2 cut(s) | 905, 1104 |
| BstV1I | GCAGC | 3 cut(s) | 235, 1261, 1345 |
| BstV2I | GAAGAC | 1 cut(s) | 560 |
| BstX2I | RGATCY | 4 cut(s) | 339, 451, 722, 971 |
| BstYI | RGATCY | 4 cut(s) | 339, 451, 722, 971 |
| Bsu15I | ATCGAT | 1 cut(s) | 503 |
| BsuRI | GGCC | 3 cut(s) | 770, 989, 1377 |
| BsuTUI | ATCGAT | 1 cut(s) | 503 |
| BtsCI | GGATG | 3 cut(s) | 435, 469, 478 |
| BtsI | GCAGTG | 1 cut(s) | 612 |
| BtsIMutI | CAGTG | 6 cut(s) | 612, 667, 747, 765, 1204, 1308 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1112 |
| Cfr13I | GGNCC | 1 cut(s) | 1595 |
| ClaI | ATCGAT | 1 cut(s) | 503 |
| Csp6I | GTAC | 5 cut(s) | 60, 163, 351, 438, 1578 |
| CviAII | CATG | 2 cut(s) | 443, 1066 |
| CviQI | GTAC | 5 cut(s) | 60, 163, 351, 438, 1578 |
| DdeI | CTNAG | 8 cut(s) | 207, 726, 807, 976, 1073, 1379, 1508, 1599 |
| DpnI | GATC | 8 cut(s) | 303, 321, 336, 341, 453, 711, 724, 973 |
| DpnII | GATC | 8 cut(s) | 301, 319, 334, 339, 451, 709, 722, 971 |
| Eam1104I | CTCTTC | 2 cut(s) | 713, 1221 |
| EarI | CTCTTC | 2 cut(s) | 713, 1221 |
| Eco130I | CCWWGG | 1 cut(s) | 1353 |
| Eco24I | GRGCYC | 1 cut(s) | 414 |
| Eco47I | GGWCC | 1 cut(s) | 1595 |
| Eco57I | CTGAAG | 2 cut(s) | 698, 1221 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1595 |
| EcoRI | GAATTC | 1 cut(s) | 844 |
| EcoRII | CCWGG | 1 cut(s) | 193 |
| EcoT14I | CCWWGG | 1 cut(s) | 1353 |
| EcoT38I | GRGCYC | 1 cut(s) | 414 |
| ErhI | CCWWGG | 1 cut(s) | 1353 |
| FaeI | CATG | 2 cut(s) | 446, 1069 |
| FaiI | YATR | 7 cut(s) | 360, 419, 444, 485, 1067, 1142, 1292 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 1596 |
| FaqI | GGGAC | 1 cut(s) | 1572 |
| FatI | CATG | 2 cut(s) | 442, 1065 |
| FbaI | TGATCA | 1 cut(s) | 319 |
| Fnu4HI | GCNGC | 3 cut(s) | 249, 1250, 1359 |
| FokI | GGATG | 3 cut(s) | 442, 476, 485 |
| FriOI | GRGCYC | 1 cut(s) | 414 |
| Fsp4HI | GCNGC | 3 cut(s) | 249, 1250, 1359 |
| FspBI | CTAG | 8 cut(s) | 387, 822, 855, 888, 921, 1008, 1125, 1583 |
| GluI | GCNGC | 3 cut(s) | 249, 1250, 1359 |
| GsuI | CTGGAG | 3 cut(s) | 663, 723, 1332 |
| HaeIII | GGCC | 3 cut(s) | 770, 989, 1377 |
| Hin1II | CATG | 2 cut(s) | 446, 1069 |
| HincII | GTYRAC | 2 cut(s) | 1204, 1416 |
| HindII | GTYRAC | 2 cut(s) | 1204, 1416 |
| HinfI | GANTC | 8 cut(s) | 8, 65, 119, 556, 811, 1097, 1516, 1547 |
| HpaI | GTTAAC | 1 cut(s) | 1416 |
| HphI | GGTGA | 3 cut(s) | 17, 780, 1166 |
| Hpy166II | GTNNAC | 2 cut(s) | 1204, 1416 |
| Hpy188III | TCNNGA | 8 cut(s) | 83, 272, 407, 626, 680, 1183, 1337, 1583 |
| Hpy8I | GTNNAC | 2 cut(s) | 1204, 1416 |
| HpyAV | CCTTC | 5 cut(s) | 87, 724, 979, 1245, 1402 |
| HpyCH4III | ACNGT | 4 cut(s) | 662, 760, 1114, 1199 |
| HpyCH4V | TGCA | 5 cut(s) | 292, 907, 965, 1063, 1249 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 257, 962, 1358 |
| HpyF3I | CTNAG | 8 cut(s) | 207, 726, 807, 976, 1073, 1379, 1508, 1599 |
| Hsp92II | CATG | 2 cut(s) | 446, 1069 |
| Ksp22I | TGATCA | 1 cut(s) | 319 |
| KspAI | GTTAAC | 1 cut(s) | 1416 |
| Kzo9I | GATC | 8 cut(s) | 301, 319, 334, 339, 451, 709, 722, 971 |
| LmnI | GCTCC | 8 cut(s) | 265, 682, 953, 1011, 1144, 1257, 1366, 1483 |
| Lsp1109I | GCAGC | 3 cut(s) | 235, 1261, 1345 |
| LweI | GCATC | 1 cut(s) | 22 |
| MaeI | CTAG | 8 cut(s) | 387, 822, 855, 888, 921, 1008, 1125, 1583 |
| MaeIII | GTNAC | 6 cut(s) | 733, 834, 979, 1068, 1117, 1317 |
| MalI | GATC | 8 cut(s) | 303, 321, 336, 341, 453, 711, 724, 973 |
| MboI | GATC | 8 cut(s) | 301, 319, 334, 339, 451, 709, 722, 971 |
| MboII | GAAGA | 9 cut(s) | 182, 461, 565, 590, 704, 730, 787, 1238, 1400 |
| MfeI | CAATTG | 1 cut(s) | 1208 |
| MflI | RGATCY | 4 cut(s) | 339, 451, 722, 971 |
| MhlI | GDGCHC | 4 cut(s) | 394, 414, 1016, 1462 |
| MluCI | AATT | 4 cut(s) | 363, 783, 844, 1208 |
| MlyI | GAGTC | 2 cut(s) | 550, 1510 |
| MmeI | TCCRAC | 1 cut(s) | 839 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1611 |
| MseI | TTAA | 5 cut(s) | 308, 687, 1004, 1415, 1521 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1289 |
| MspCI | CTTAAG | 1 cut(s) | 1520 |
| MspR9I | CCNGG | 1 cut(s) | 195 |
| MunI | CAATTG | 1 cut(s) | 1208 |
| Mva1269I | GAATGC | 1 cut(s) | 1178 |
| MvaI | CCWGG | 1 cut(s) | 195 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 257, 962, 1358 |
| NdeII | GATC | 8 cut(s) | 301, 319, 334, 339, 451, 709, 722, 971 |
| NlaIII | CATG | 2 cut(s) | 446, 1069 |
| NlaIV | GGNNCC | 1 cut(s) | 1596 |
| NmeAIII | GCCGAG | 1 cut(s) | 286 |
| NmuCI | GTSAC | 2 cut(s) | 1068, 1317 |
| NspI | RCATGY | 1 cut(s) | 1069 |
| PciI | ACATGT | 1 cut(s) | 1065 |
| PctI | GAATGC | 1 cut(s) | 1178 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1611 |
| PfeI | GAWTC | 6 cut(s) | 8, 65, 119, 811, 1097, 1547 |
| PflFI | GACNNNGTC | 1 cut(s) | 1166 |
| PkrI | GCNGC | 3 cut(s) | 250, 1251, 1360 |
| PleI | GAGTC | 2 cut(s) | 550, 1510 |
| PpsI | GAGTC | 2 cut(s) | 550, 1510 |
| PpuMI | RGGWCCY | 1 cut(s) | 1595 |
| PscI | ACATGT | 1 cut(s) | 1065 |
| Psp5II | RGGWCCY | 1 cut(s) | 1595 |
| Psp6I | CCWGG | 1 cut(s) | 193 |
| PspGI | CCWGG | 1 cut(s) | 193 |
| PspN4I | GGNNCC | 1 cut(s) | 1596 |
| PspPI | GGNCC | 1 cut(s) | 1595 |
| PspPPI | RGGWCCY | 1 cut(s) | 1595 |
| PstI | CTGCAG | 1 cut(s) | 909 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1112 |
| PsuI | RGATCY | 4 cut(s) | 339, 451, 722, 971 |
| PsyI | GACNNNGTC | 1 cut(s) | 1166 |
| RsaI | GTAC | 5 cut(s) | 61, 164, 352, 439, 1579 |
| RsaNI | GTAC | 5 cut(s) | 60, 163, 351, 438, 1578 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1289 |
| SaqAI | TTAA | 5 cut(s) | 308, 687, 1004, 1415, 1521 |
| SatI | GCNGC | 3 cut(s) | 249, 1250, 1359 |
| Sau3AI | GATC | 8 cut(s) | 301, 319, 334, 339, 451, 709, 722, 971 |
| Sau96I | GGNCC | 1 cut(s) | 1595 |
| ScaI | AGTACT | 3 cut(s) | 164, 439, 1579 |
| SchI | GAGTC | 2 cut(s) | 550, 1510 |
| ScrFI | CCNGG | 1 cut(s) | 195 |
| SduI | GDGCHC | 4 cut(s) | 394, 414, 1016, 1462 |
| SfaNI | GCATC | 1 cut(s) | 22 |
| SfcI | CTRYAG | 2 cut(s) | 905, 1104 |
| SinI | GGWCC | 1 cut(s) | 1595 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1289 |
| SmlI | CTYRAG | 4 cut(s) | 393, 455, 624, 1520 |
| SmoI | CTYRAG | 4 cut(s) | 393, 455, 624, 1520 |
| SpeI | ACTAGT | 1 cut(s) | 386 |
| Sse9I | AATT | 4 cut(s) | 363, 783, 844, 1208 |
| SsiI | CCGC | 2 cut(s) | 537, 872 |
| SspMI | CTAG | 8 cut(s) | 387, 822, 855, 888, 921, 1008, 1125, 1583 |
| StyD4I | CCNGG | 1 cut(s) | 193 |
| StyI | CCWWGG | 1 cut(s) | 1353 |
| TaaI | ACNGT | 4 cut(s) | 662, 760, 1114, 1199 |
| TaqI | TCGA | 5 cut(s) | 253, 503, 708, 1265, 1571 |
| TasI | AATT | 4 cut(s) | 363, 783, 844, 1208 |
| TatI | WGTACW | 3 cut(s) | 162, 437, 1577 |
| TfiI | GAWTC | 6 cut(s) | 8, 65, 119, 811, 1097, 1547 |
| Tru1I | TTAA | 5 cut(s) | 308, 687, 1004, 1415, 1521 |
| Tru9I | TTAA | 5 cut(s) | 308, 687, 1004, 1415, 1521 |
| TscAI | CASTG | 6 cut(s) | 619, 667, 747, 765, 1204, 1315 |
| TseFI | GTSAC | 2 cut(s) | 1068, 1317 |
| TseI | GCWGC | 3 cut(s) | 248, 1249, 1358 |
| Tsp45I | GTSAC | 2 cut(s) | 1068, 1317 |
| TspDTI | ATGAA | 5 cut(s) | 57, 87, 111, 987, 1239 |
| TspGWI | ACGGA | 2 cut(s) | 368, 1420 |
| TspRI | CASTG | 6 cut(s) | 619, 667, 747, 765, 1204, 1315 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1166 |
| Vha464I | CTTAAG | 1 cut(s) | 1520 |
| VpaK11BI | GGWCC | 1 cut(s) | 1595 |
| XapI | RAATTY | 1 cut(s) | 844 |
| XbaI | TCTAGA | 1 cut(s) | 1582 |
| XceI | RCATGY | 1 cut(s) | 1069 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1611 |
| XspI | CTAG | 8 cut(s) | 387, 822, 855, 888, 921, 1008, 1125, 1583 |
| ZrmI | AGTACT | 3 cut(s) | 164, 439, 1579 |