Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0003534

Physical Location & Seq

Genomic Coordinates Reverse (-)

22492074 .. 22495997

Gene Structure 3924 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1229500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

ATGTCATCGGATCGTCCTCCATCCACCACACTCTCAGAGTACCTAGCAATGCAAAACTCTACCCCATCGCCACCACCACAAACACCGTCTCCATTTCTCTCCTCCACACCCACCACCGCCTCCTCCGCTGCCATTCCCATCCTCTCAATCAAAGACCCCAAAACCCTCCTCTCAATCATCATCGTCTTTTCCATTTTCGCCCTCCTCCTCTTCCTCTCCTCCTCCTCCTCCTCCTCGTCATTCTCCTCCTCCGCTGCCTCCCGCCATTATCGACCCGACCCATTTCTCTTTCCCAACCAGCAAGCCCACCGCATCATCTACCACGACAACAACTCCTCAGATCCCACGCCTCCCTCCATCGCCTACCTCTTATCCGGGTCAAAAGGGGACTTGGGTCGGATCCTGAGACTTCTCCACGCCGCCTACCACCCAGAAACCAGTATCTCCTCCACCTCGACCGCTCTGCCTCCGATTCCGAGAGGGAAAAGTTGGCTCTCAGAGTCCAATCACTGCCCATTTTCAGAGCTGCCCAGAATGTCCATGTCATTGGTAATGCCGATTTTGTGTACCCAACTGGCTCTTCTGCTATCTCCTTTACGCTCCATGGCGCCTCGATACTGCTGCGTCTTTCGCCCAATTGGGATTGATCTTCTTCACATTATGTCATTCCTGCCGAAAGATCTAAACTTTGTGAACCATTCAAGTTATATCGGCTGGAGAGAGTCTAGGAGATTGAGACCGATAATTGTTGACCCGGGGCTTTATCTTTCGGAGAAAACTGACATGTTTTATGCTACACAGAAAAGGGTGTTGCCTAATGCTTACCGGTTGTTCACAGGTTCTTCTTTTACGATTCTAAGTCGTAATTTCATTGAATTTTGTGTTGTTGGTATTGAAAACCTGCCAAGGACTTTGTTGATGTACTTCTCAAACACACCTTCTGCTCTTTCGAATTACTTCCCCACCATTCTTTGCAACTCCCAGCAGTTCAATAAGACTATCATAAACCACAACTTGGTATATGCTAATTCCGACACACCCCCTAGAGAGAAGCCCCAGCCAATCAGTTCCACTGGTTATGATGCTATGATTCAGCATGGAGCTGCCTTTGCCACTGGACTTCAGTTAGACGATCCAATCCTTGACCGAGTGGACAGAGAAGTTTTAAAACGCAGACGAGGAAAAGTTGTTCCTGGAGGCTGGTGTTTAGGTGGGTTTGCAAATGACACATGTTCAGTGTGGGGGGATGCTGATATTTTGAGGCCTAGTCCACGAGCAAGAATACTTGAGAGACTTTTAGTCAGATTGCTCTCAAATGGCACATTCCGGTCTCATCAATGCATAGACGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006029 GO:0006807 GO:0007275 GO:0007399 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0010033 GO:0010721 GO:0010975 GO:0010977 GO:0012505 GO:0016020 GO:0019538 GO:0022008 GO:0030154 GO:0030166 GO:0031090 GO:0031344 GO:0031345 GO:0031984 GO:0032101 GO:0032102 GO:0032501 GO:0032502 GO:0034097 GO:0034645 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045595 GO:0045596 GO:0045664 GO:0045665 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048679 GO:0048681 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050768 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051128 GO:0051129 GO:0051239 GO:0051241 GO:0051960 GO:0051961 GO:0060284 GO:0065007 GO:0070555 GO:0070570 GO:0070571 GO:0071704 GO:0080134 GO:0080135 GO:0098588 GO:0098791 GO:0120035 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1903034 GO:1903035 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Branch

Protein Analysis

451

Amino Acids

50.03

Weight (kDa)

9.2

Isoelectric Point (pI)

59.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Branch	PF02485	216 - 352	6.2e-26	Core-2/I-Branching enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003534)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24040
fragaria_vesca	FvH4_4g05540 FvH4_4g05540
malus_domestica	MD13G1229300.v1.1 MD13G1229500.v1.1 MD16G1235200.v1.1
prunus_persica	Prupe.1G057400_v2.0.a1
pyrus_communis	pycom13g20230 pycom16g19590
rosa_chinensis	RchiOBHm_Chr2g0147061 RchiOBHm_Chr4g0396651 RchiOBHm_Chr4g0405401 RchiOBHm_Chr6g0295211
rosa_laevigata	RLG00000009513
rosa_multiflora	Rmu_sc0001167.1_g000024 Rmu_sc0004742.1_g000015 Rmu_sc0006586.1_g000016 Rmu_sc0008016.1_g000002 Rmu_sc0010969.1_g000008
rosa_roxburghii	Rroxscaffold_2G00122980 Rroxscaffold_5G00341510 Rroxscaffold_6G00395470
rosa_rugosa	Rorug03G0348200
rosa_samantha	Rh1AG084400 Rh2AG297100 Rh2BG305700 Rh2CG284100 Rh4AG071000 Rh4BG069000 Rh4CG076800 Rh4DG066200 Rh5DG128700 Rh7CG241000
rosa_wichuraiana	Rw2G023630 Rw4G005670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	909
AccB1I	GGYRCC	1 cut(s)	607
AccB7I	CCANNNNNTGG	1 cut(s)	1015
AccBSI	CCGCTC	1 cut(s)	461
AciI	CCGC	7 cut(s)	117, 126, 252, 262, 310, 420, 459
AclWI	GGATC	5 cut(s)	18, 335, 394, 407, 1127
AcsI	RAATTY	1 cut(s)	875
AcuI	CTGAAG	1 cut(s)	1106
AcyI	GRCGYC	1 cut(s)	608
AfaI	GTAC	3 cut(s)	41, 568, 923
AfiI	CCNNNNNNNGG	1 cut(s)	1015
AflIII	ACRYGT	2 cut(s)	783, 1229
AgeI	ACCGGT	1 cut(s)	825
AgsI	TTSAA	4 cut(s)	702, 875, 896, 991
AhdI	GACNNNNNGTC	1 cut(s)	1298
AjnI	CCWGG	1 cut(s)	1192
AjuI	GAANNNNNNNTTGG	2 cut(s)	564, 596
AloI	GAACNNNNNNTCC	2 cut(s)	1173, 1205
AluBI	AGCT	2 cut(s)	526, 1103
AluI	AGCT	2 cut(s)	526, 1103
Alw26I	GTCTC	5 cut(s)	93, 400, 730, 1285, 1335
AlwI	GGATC	5 cut(s)	18, 335, 394, 407, 1127
Ama87I	CYCGRG	1 cut(s)	754
AoxI	GGCC	1 cut(s)	1262
ApeKI	GCWGC	5 cut(s)	128, 254, 526, 621, 1103
ApoI	RAATTY	1 cut(s)	875
AsiGI	ACCGGT	1 cut(s)	825
Asp700I	GAANNNNTTC	1 cut(s)	956
AspLEI	GCGC	1 cut(s)	610
AsuC2I	CCSGG	3 cut(s)	376, 755, 756
AsuII	TTCGAA	1 cut(s)	950
AvaI	CYCGRG	1 cut(s)	754
BamHI	GGATCC	1 cut(s)	399
BanI	GGYRCC	1 cut(s)	607
BauI	CACGAG	1 cut(s)	1272
BbvI	GCAGC	5 cut(s)	115, 241, 513, 608, 1090
BccI	CCATC	4 cut(s)	28, 73, 146, 365
BcgI	CGANNNNNNTGC	4 cut(s)	445, 479, 603, 637
BciT130I	CCWGG	1 cut(s)	1194
BcnI	CCSGG	3 cut(s)	376, 755, 756
BcoDI	GTCTC	5 cut(s)	93, 400, 730, 1285, 1335
BfaI	CTAG	4 cut(s)	44, 726, 1044, 1266
BfoI	RGCGCY	1 cut(s)	611
BfuAI	ACCTGC	1 cut(s)	909
BglII	AGATCT	1 cut(s)	679
BisI	GCNGC	6 cut(s)	129, 255, 420, 527, 622, 1104
BlsI	GCNGC	6 cut(s)	130, 256, 421, 528, 623, 1105
Bme1390I	CCNGG	4 cut(s)	376, 755, 756, 1194
BmeRI	GACNNNNNGTC	1 cut(s)	1298
BmeT110I	CYCGRG	1 cut(s)	754
BmiI	GGNNCC	2 cut(s)	401, 609
BmrFI	CCNGG	4 cut(s)	376, 755, 756, 1194
BmsI	GCATC	3 cut(s)	321, 1072, 1237
BoxI	GACNNNNGTC	1 cut(s)	393
BpmI	CTGGAG	2 cut(s)	736, 1215
Bpu14I	TTCGAA	1 cut(s)	950
BpuEI	CTTGAG	1 cut(s)	1307
BpuMI	CCSGG	3 cut(s)	376, 755, 756
BsaHI	GRCGYC	1 cut(s)	608
BsaI	GGTCTC	2 cut(s)	730, 1335
BsaJI	CCNNGG	4 cut(s)	603, 754, 755, 905
BsaWI	WCCGGW	2 cut(s)	825, 1326
BsaXI	ACNNNNNCTCC	4 cut(s)	73, 103, 317, 347
Bsc4I	CCNNNNNNNGG	1 cut(s)	1015
Bse118I	RCCGGY	1 cut(s)	825
Bse1I	ACTGG	4 cut(s)	438, 579, 1078, 1120
Bse3DI	GCAATG	1 cut(s)	54
BseBI	CCWGG	1 cut(s)	1194
BseDI	CCNNGG	4 cut(s)	603, 754, 755, 905
BseGI	GGATG	3 cut(s)	20, 138, 1252
BseLI	CCNNNNNNNGG	1 cut(s)	1015
BseMI	GCAATG	1 cut(s)	54
BseMII	CTCAG	4 cut(s)	48, 351, 395, 510
BseNI	ACTGG	4 cut(s)	438, 579, 1078, 1120
BseXI	GCAGC	5 cut(s)	115, 241, 513, 608, 1090
BseYI	CCCAGC	2 cut(s)	981, 1056
Bsh1285I	CGRYCG	1 cut(s)	459
BshFI	GGCC	1 cut(s)	1264
BshNI	GGYRCC	1 cut(s)	607
BshTI	ACCGGT	1 cut(s)	825
BsiEI	CGRYCG	1 cut(s)	459
BsiHKCI	CYCGRG	1 cut(s)	754
BsiSI	CCGG	4 cut(s)	375, 755, 826, 1327
BslFI	GGGAC	1 cut(s)	401
BslI	CCNNNNNNNGG	1 cut(s)	1015
BsmAI	GTCTC	5 cut(s)	93, 400, 730, 1285, 1335
BsmBI	CGTCTC	1 cut(s)	93
BsmFI	GGGAC	1 cut(s)	401
BsnI	GGCC	1 cut(s)	1264
Bso31I	GGTCTC	2 cut(s)	730, 1335
BsoBI	CYCGRG	1 cut(s)	754
Bsp119I	TTCGAA	1 cut(s)	950
Bsp143I	GATC	6 cut(s)	10, 340, 399, 646, 679, 1132
Bsp19I	CCATGG	1 cut(s)	603
BspACI	CCGC	7 cut(s)	117, 126, 252, 262, 310, 420, 459
BspANI	GGCC	1 cut(s)	1264
BspCNI	CTCAG	4 cut(s)	47, 350, 396, 509
BspLI	GGNNCC	2 cut(s)	401, 609
BspMI	ACCTGC	1 cut(s)	909
BspPI	GGATC	5 cut(s)	18, 335, 394, 407, 1127
BspQI	GCTCTTC	1 cut(s)	585
BspT104I	TTCGAA	1 cut(s)	950
BspT107I	GGYRCC	1 cut(s)	607
BspTNI	GGTCTC	2 cut(s)	730, 1335
BsrBI	CCGCTC	1 cut(s)	461
BsrDI	GCAATG	1 cut(s)	54
BsrFI	RCCGGY	1 cut(s)	825
BsrI	ACTGG	4 cut(s)	438, 579, 1078, 1120
BssAI	RCCGGY	1 cut(s)	825
BssECI	CCNNGG	4 cut(s)	603, 754, 755, 905
BssMI	GATC	6 cut(s)	10, 340, 399, 646, 679, 1132
BssNI	GRCGYC	1 cut(s)	608
BssSI	CACGAG	1 cut(s)	1272
BssT1I	CCWWGG	2 cut(s)	603, 905
Bst2BI	CACGAG	1 cut(s)	1272
Bst2UI	CCWGG	1 cut(s)	1194
Bst4CI	ACNGT	1 cut(s)	87
Bst6I	CTCTTC	2 cut(s)	215, 585
BstACI	GRCGYC	1 cut(s)	608
BstBI	TTCGAA	1 cut(s)	950
BstC8I	GCNNGC	1 cut(s)	303
BstDEI	CTNAG	5 cut(s)	34, 337, 404, 496, 857
BstDSI	CCRYGG	1 cut(s)	603
BstF5I	GGATG	3 cut(s)	20, 138, 1252
BstH2I	RGCGCY	1 cut(s)	611
BstHHI	GCGC	1 cut(s)	610
BstKTI	GATC	6 cut(s)	13, 343, 402, 649, 682, 1135
BstMAI	GTCTC	5 cut(s)	93, 400, 730, 1285, 1335
BstMBI	GATC	6 cut(s)	10, 340, 399, 646, 679, 1132
BstMCI	CGRYCG	1 cut(s)	459
BstMWI	GCNNNNNNNGC	3 cut(s)	125, 630, 1109
BstNI	CCWGG	1 cut(s)	1194
BstNSI	RCATGY	2 cut(s)	787, 1233
BstPAI	GACNNNNGTC	1 cut(s)	393
BstSCI	CCNGG	4 cut(s)	374, 753, 754, 1192
BstV1I	GCAGC	5 cut(s)	115, 241, 513, 608, 1090
BstX2I	RGATCY	3 cut(s)	340, 399, 679
BstXI	CCANNNNNNTGG	1 cut(s)	547
BstYI	RGATCY	3 cut(s)	340, 399, 679
BsuRI	GGCC	1 cut(s)	1264
BtgI	CCRYGG	1 cut(s)	603
BtgZI	GCGATG	2 cut(s)	51, 343
BtsCI	GGATG	3 cut(s)	20, 138, 1252
BtsI	GCAGTG	1 cut(s)	508
BtsIMutI	CAGTG	4 cut(s)	508, 1071, 1113, 1242
BveI	ACCTGC	1 cut(s)	909
Cac8I	GCNNGC	1 cut(s)	303
CfoI	GCGC	1 cut(s)	610
Cfr10I	RCCGGY	1 cut(s)	825
Cfr9I	CCCGGG	1 cut(s)	754
CseI	GACGC	1 cut(s)	613
Csp6I	GTAC	3 cut(s)	40, 567, 922
CspAI	ACCGGT	1 cut(s)	825
CviAII	CATG	5 cut(s)	541, 604, 784, 1097, 1230
CviQI	GTAC	3 cut(s)	40, 567, 922
DdeI	CTNAG	5 cut(s)	34, 337, 404, 496, 857
DinI	GGCGCC	1 cut(s)	609
DpnI	GATC	6 cut(s)	12, 342, 401, 648, 681, 1134
DpnII	GATC	6 cut(s)	10, 340, 399, 646, 679, 1132
DraI	TTTAAA	1 cut(s)	1167
DriI	GACNNNNNGTC	1 cut(s)	1298
Eam1104I	CTCTTC	2 cut(s)	215, 585
Eam1105I	GACNNNNNGTC	1 cut(s)	1298
EarI	CTCTTC	2 cut(s)	215, 585
Eco130I	CCWWGG	2 cut(s)	603, 905
Eco147I	AGGCCT	1 cut(s)	1264
Eco31I	GGTCTC	2 cut(s)	730, 1335
Eco57I	CTGAAG	1 cut(s)	1106
Eco88I	CYCGRG	1 cut(s)	754
EcoRII	CCWGG	1 cut(s)	1192
EcoT14I	CCWWGG	2 cut(s)	603, 905
EcoT22I	ATGCAT	1 cut(s)	1343
EgeI	GGCGCC	1 cut(s)	609
EheI	GGCGCC	1 cut(s)	609
ErhI	CCWWGG	2 cut(s)	603, 905
Esp3I	CGTCTC	1 cut(s)	93
FaeI	CATG	5 cut(s)	544, 607, 787, 1100, 1233
FaqI	GGGAC	1 cut(s)	401
FatI	CATG	5 cut(s)	540, 603, 783, 1096, 1229
FauI	CCCGC	1 cut(s)	269
Fnu4HI	GCNGC	6 cut(s)	129, 255, 420, 527, 622, 1104
FokI	GGATG	3 cut(s)	7, 125, 1259
Fsp4HI	GCNGC	6 cut(s)	129, 255, 420, 527, 622, 1104
FspBI	CTAG	4 cut(s)	44, 726, 1044, 1266
GlaI	GCGC	1 cut(s)	609
GluI	GCNGC	6 cut(s)	129, 255, 420, 527, 622, 1104
GsaI	CCCAGC	2 cut(s)	985, 1060
GsuI	CTGGAG	2 cut(s)	736, 1215
HaeII	RGCGCY	1 cut(s)	611
HaeIII	GGCC	1 cut(s)	1264
HapII	CCGG	4 cut(s)	375, 755, 826, 1327
HgaI	GACGC	1 cut(s)	613
HhaI	GCGC	1 cut(s)	610
Hin1I	GRCGYC	1 cut(s)	608
Hin1II	CATG	5 cut(s)	544, 607, 787, 1100, 1233
Hin6I	GCGC	1 cut(s)	608
HinP1I	GCGC	1 cut(s)	608
HincII	GTYRAC	1 cut(s)	751
HindII	GTYRAC	1 cut(s)	751
HinfI	GANTC	5 cut(s)	472, 500, 722, 853, 1090
HpaII	CCGG	4 cut(s)	375, 755, 826, 1327
Hpy166II	GTNNAC	6 cut(s)	567, 694, 751, 834, 1153, 1271
Hpy188III	TCNNGA	1 cut(s)	403
Hpy8I	GTNNAC	6 cut(s)	567, 694, 751, 834, 1153, 1271
HpyAV	CCTTC	1 cut(s)	948
HpyCH4III	ACNGT	1 cut(s)	87
HpyCH4V	TGCA	4 cut(s)	52, 975, 1220, 1341
HpyF10VI	GCNNNNNNNGC	3 cut(s)	125, 630, 1109
HpyF3I	CTNAG	5 cut(s)	34, 337, 404, 496, 857
Hsp92I	GRCGYC	1 cut(s)	608
Hsp92II	CATG	5 cut(s)	544, 607, 787, 1100, 1233
HspAI	GCGC	1 cut(s)	608
KasI	GGCGCC	1 cut(s)	607
Kzo9I	GATC	6 cut(s)	10, 340, 399, 646, 679, 1132
LguI	GCTCTTC	1 cut(s)	585
LmnI	GCTCC	2 cut(s)	605, 1100
Lsp1109I	GCAGC	5 cut(s)	115, 241, 513, 608, 1090
LweI	GCATC	3 cut(s)	321, 1072, 1237
MaeI	CTAG	4 cut(s)	44, 726, 1044, 1266
MalI	GATC	6 cut(s)	12, 342, 401, 648, 681, 1134
MbiI	CCGCTC	1 cut(s)	461
MboI	GATC	6 cut(s)	10, 340, 399, 646, 679, 1132
MboII	GAAGA	5 cut(s)	202, 572, 641, 644, 834
MfeI	CAATTG	1 cut(s)	636
MflI	RGATCY	3 cut(s)	340, 399, 679
MluCI	AATT	6 cut(s)	636, 744, 865, 875, 952, 1027
Mly113I	GGCGCC	1 cut(s)	608
MlyI	GAGTC	2 cut(s)	509, 731
MmeI	TCCRAC	2 cut(s)	377, 1056
Mph1103I	ATGCAT	1 cut(s)	1343
MroXI	GAANNNNTTC	1 cut(s)	956
MseI	TTAA	1 cut(s)	1166
MspA1I	CMGCKG	2 cut(s)	128, 254
MspI	CCGG	4 cut(s)	375, 755, 826, 1327
MspR9I	CCNGG	4 cut(s)	376, 755, 756, 1194
MunI	CAATTG	1 cut(s)	636
MvaI	CCWGG	1 cut(s)	1194
MwoI	GCNNNNNNNGC	3 cut(s)	125, 630, 1109
NarI	GGCGCC	1 cut(s)	608
NciI	CCSGG	3 cut(s)	376, 755, 756
NcoI	CCATGG	1 cut(s)	603
NdeII	GATC	6 cut(s)	10, 340, 399, 646, 679, 1132
NlaIII	CATG	5 cut(s)	544, 607, 787, 1100, 1233
NlaIV	GGNNCC	2 cut(s)	401, 609
NsiI	ATGCAT	1 cut(s)	1343
NspI	RCATGY	2 cut(s)	787, 1233
NspV	TTCGAA	1 cut(s)	950
PceI	AGGCCT	1 cut(s)	1264
PciI	ACATGT	2 cut(s)	783, 1229
PciSI	GCTCTTC	1 cut(s)	585
PdmI	GAANNNNTTC	1 cut(s)	956
PfeI	GAWTC	3 cut(s)	472, 853, 1090
PflMI	CCANNNNNTGG	1 cut(s)	1015
PfoI	TCCNGGA	1 cut(s)	1192
PinAI	ACCGGT	1 cut(s)	825
PkrI	GCNGC	6 cut(s)	130, 256, 421, 528, 623, 1105
PleI	GAGTC	2 cut(s)	508, 730
PluTI	GGCGCC	1 cut(s)	611
PpsI	GAGTC	2 cut(s)	508, 730
PscI	ACATGT	2 cut(s)	783, 1229
PshAI	GACNNNNGTC	1 cut(s)	393
Psp6I	CCWGG	1 cut(s)	1192
PspFI	CCCAGC	2 cut(s)	981, 1056
PspGI	CCWGG	1 cut(s)	1192
PspN4I	GGNNCC	2 cut(s)	401, 609
PsuI	RGATCY	3 cut(s)	340, 399, 679
RsaI	GTAC	3 cut(s)	41, 568, 923
RsaNI	GTAC	3 cut(s)	40, 567, 922
SapI	GCTCTTC	1 cut(s)	585
SaqAI	TTAA	1 cut(s)	1166
SatI	GCNGC	6 cut(s)	129, 255, 420, 527, 622, 1104
Sau3AI	GATC	6 cut(s)	10, 340, 399, 646, 679, 1132
SchI	GAGTC	2 cut(s)	509, 731
ScrFI	CCNGG	4 cut(s)	376, 755, 756, 1194
SetI	ASST	9 cut(s)	45, 369, 455, 528, 841, 903, 940, 1105, 1213
SfaNI	GCATC	3 cut(s)	321, 1072, 1237
SfoI	GGCGCC	1 cut(s)	609
SfuI	TTCGAA	1 cut(s)	950
SmaI	CCCGGG	1 cut(s)	756
SmlI	CTYRAG	1 cut(s)	1286
SmoI	CTYRAG	1 cut(s)	1286
Sse9I	AATT	6 cut(s)	636, 744, 865, 875, 952, 1027
SseBI	AGGCCT	1 cut(s)	1264
SsiI	CCGC	7 cut(s)	117, 126, 252, 262, 310, 420, 459
SspDI	GGCGCC	1 cut(s)	607
SspMI	CTAG	4 cut(s)	44, 726, 1044, 1266
StuI	AGGCCT	1 cut(s)	1264
StyD4I	CCNGG	4 cut(s)	374, 753, 754, 1192
StyI	CCWWGG	2 cut(s)	603, 905
TaaI	ACNGT	1 cut(s)	87
TaqI	TCGA	4 cut(s)	271, 455, 613, 950
TaqII	GACCGA	2 cut(s)	754, 1161
TasI	AATT	6 cut(s)	636, 744, 865, 875, 952, 1027
TatI	WGTACW	1 cut(s)	921
TauI	GCSGC	1 cut(s)	422
TfiI	GAWTC	3 cut(s)	472, 853, 1090
Tru1I	TTAA	1 cut(s)	1166
Tru9I	TTAA	1 cut(s)	1166
TscAI	CASTG	4 cut(s)	515, 1078, 1120, 1242
TseI	GCWGC	5 cut(s)	128, 254, 526, 621, 1103
TspDTI	ATGAA	1 cut(s)	859
TspMI	CCCGGG	1 cut(s)	754
TspRI	CASTG	4 cut(s)	515, 1078, 1120, 1242
Van91I	CCANNNNNTGG	1 cut(s)	1015
XapI	RAATTY	1 cut(s)	875
XceI	RCATGY	2 cut(s)	787, 1233
XmaI	CCCGGG	1 cut(s)	754
XmnI	GAANNNNTTC	1 cut(s)	956
XspI	CTAG	4 cut(s)	44, 726, 1044, 1266
Zsp2I	ATGCAT	1 cut(s)	1343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.