Prupe.1G196700_v2.0.a1

Belongs to the carbohydrate kinase PfkB family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
18768317 .. 18771430
3114 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G196700.1

Sequence Viewer

Length: 990 bp
ATGGCTAACAATGGCGTACCGGCGACCGGAAAAGGCCTGATCGTGAGTTTTGGCGAGATGCTGATCGACTTTGTGCCCACTGAATCGGGCGTTTCGCTGGCGGAGGCTCCGGGCTTCCTCAAGGCCCCCGGTGGTGCCCCTGCTAACGTGGCGATTGCTGTGGCCCGCCTCGGCGGGAAGGCGGCGTTCGTCGGAAAACTCGGCGACGACGAGTTCGGCCACATGCTCGCCGGCATCCTGAAGCAATACGGCGTCACCGGAGAGGGCATCCTCTTCGATCAGGGCGCCCGCACCGCCCTGGCCTTCGTGACCCTACGCGCCGACGGAGAGCGCGAGTTCATGTTCTACCGCAACCCTAGCGCCGATATGCTGCTCAAGCCCGACGAGCTCAACTTGGAGCTCATCAAATCCGCCAAGGTGTTCCACTATGGATCCATAAGCTTGATTGTGGAGCCATGCAGATCAGCCCATCTAAAGGCAATGGAGGTGGCCAAAGATGCCGGTGCATTACTCTCCTACGACCCGAACCTGCGGCTGCCGCTGTGGCCGTCTGCGGAGGAGGCACGCAAGCAGATTATGAGCATATGGGAGAAGGCTGATTTGATCAAGATTAGCGATGTGGAGCTTGAGTTCCTCACAGGTAACCCTAAAATTGATGATGAGAATGCATTGACTCTGTGGAAGGACAACTTGAAGCTCCTCCTCGTCACTCTTGGTGAGAACGGTTGCAGATACTACACCAAGCATTTCCGGGGATCTGTGGAAGCCTTCCATGTCAAAACAGTGGACACTACTGGTGCTGGTGATTCATTTGTGGGTGCCCTCCTTGCAAAGATTGTTGATGACCAATCTATTCTTGAAGATGAGCAAAGGTTGAGAGGGGTGCTGAAATTTGCAAATGCATGTGGAGCCATTACAACCACCAAGAAGGGAGCAATCCCTGCCCTTCCCAGCGAGTCTGAAGCTTTCACCCTAATCAAGGGAGCTTAG

Protein Analysis

330

Amino Acids

35.3

Weight (kDa)

5.41

Isoelectric Point (pI)

21.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 537
AccB1I GGYRCC 3 cut(s) 134, 284, 818
AccII CGCG 2 cut(s) 318, 333
AclWI GGATC 3 cut(s) 426, 439, 763
AcoI YGGCCR 3 cut(s) 217, 489, 545
AcsI RAATTY 1 cut(s) 890
AcuI CTGAAG 2 cut(s) 260, 981
AcyI GRCGYC 2 cut(s) 252, 285
AfaI GTAC 1 cut(s) 18
AfiI CCNNNNNNNGG 3 cut(s) 26, 475, 979
AgsI TTSAA 2 cut(s) 694, 860
AjnI CCWGG 1 cut(s) 297
AloI GAACNNNNNNTCC 2 cut(s) 614, 646
AluBI AGCT 7 cut(s) 388, 400, 441, 625, 697, 965, 986
AluI AGCT 7 cut(s) 388, 400, 441, 625, 697, 965, 986
Alw21I GWGCWC 2 cut(s) 390, 402
AlwI GGATC 3 cut(s) 426, 439, 763
AoxI GGCC 7 cut(s) 34, 123, 162, 217, 300, 489, 545
ApeKI GCWGC 2 cut(s) 370, 535
ApoI RAATTY 1 cut(s) 890
ArsI GACNNNNNNTTYG 2 cut(s) 197, 229
AspLEI GCGC 4 cut(s) 287, 320, 333, 362
AspS9I GGNCC 2 cut(s) 124, 163
AsuC2I CCSGG 3 cut(s) 111, 129, 752
AsuHPI GGTGA 4 cut(s) 247, 728, 815, 961
BaeGI GKGCMC 3 cut(s) 78, 139, 823
BalI TGGCCA 1 cut(s) 491
BamHI GGATCC 1 cut(s) 431
BanI GGYRCC 3 cut(s) 134, 284, 818
BanII GRGCYC 2 cut(s) 390, 402
Bbv12I GWGCWC 2 cut(s) 390, 402
BbvI GCAGC 2 cut(s) 357, 522
BccI CCATC 1 cut(s) 477
BceAI ACGGC 2 cut(s) 265, 532
BcgI CGANNNNNNTGC 2 cut(s) 256, 290
BciT130I CCWGG 1 cut(s) 299
BclI TGATCA 1 cut(s) 603
BcnI CCSGG 3 cut(s) 111, 129, 752
BfaI CTAG 1 cut(s) 357
BfoI RGCGCY 2 cut(s) 288, 363
BfuAI ACCTGC 1 cut(s) 537
BglI GCCNNNNNGGC 1 cut(s) 544
BisI GCNGC 5 cut(s) 183, 371, 533, 536, 539
BlsI GCNGC 5 cut(s) 184, 372, 534, 537, 540
Bme1390I CCNGG 4 cut(s) 111, 129, 299, 752
BmgT120I GGNCC 2 cut(s) 124, 163
BmiI GGNNCC 8 cut(s) 108, 126, 136, 286, 433, 453, 820, 910
BmrFI CCNGG 4 cut(s) 111, 129, 299, 752
BmsI GCATC 4 cut(s) 48, 243, 276, 487
BpuEI CTTGAG 3 cut(s) 104, 359, 647
BpuMI CCSGG 3 cut(s) 111, 129, 752
BsaBI GATNNNNATC 1 cut(s) 62
BsaHI GRCGYC 2 cut(s) 252, 285
BsaJI CCNNGG 5 cut(s) 127, 169, 297, 414, 751
BsaWI WCCGGW 2 cut(s) 26, 257
BsaXI ACNNNNNCTCC 2 cut(s) 614, 644
Bsc4I CCNNNNNNNGG 3 cut(s) 26, 475, 979
Bse118I RCCGGY 3 cut(s) 19, 230, 500
Bse1I ACTGG 1 cut(s) 799
Bse3DI GCAATG 1 cut(s) 486
Bse8I GATNNNNATC 1 cut(s) 62
BseBI CCWGG 1 cut(s) 299
BseDI CCNNGG 5 cut(s) 127, 169, 297, 414, 751
BseGI GGATG 2 cut(s) 234, 267
BseJI GATNNNNATC 1 cut(s) 62
BseLI CCNNNNNNNGG 3 cut(s) 26, 475, 979
BseMI GCAATG 1 cut(s) 486
BseNI ACTGG 1 cut(s) 799
BseRI GAGGAG 3 cut(s) 572, 689, 692
BseSI GKGCMC 3 cut(s) 78, 139, 823
BseXI GCAGC 2 cut(s) 357, 522
BseYI CCCAGC 1 cut(s) 950
Bsh1236I CGCG 2 cut(s) 318, 333
Bsh1285I CGRYCG 1 cut(s) 27
BshFI GGCC 7 cut(s) 36, 125, 164, 219, 302, 491, 547
BshNI GGYRCC 3 cut(s) 134, 284, 818
BsiEI CGRYCG 1 cut(s) 27
BsiHKAI GWGCWC 2 cut(s) 390, 402
BsiSI CCGG 8 cut(s) 20, 27, 110, 129, 231, 258, 501, 751
BslI CCNNNNNNNGG 3 cut(s) 26, 475, 979
BsmI GAATGC 1 cut(s) 670
BsnI GGCC 7 cut(s) 36, 125, 164, 219, 302, 491, 547
Bsp1286I GDGCHC 5 cut(s) 78, 139, 390, 402, 823
Bsp143I GATC 7 cut(s) 39, 63, 277, 431, 461, 603, 755
BspANI GGCC 7 cut(s) 36, 125, 164, 219, 302, 491, 547
BspFNI CGCG 2 cut(s) 318, 333
BspLI GGNNCC 8 cut(s) 108, 126, 136, 286, 433, 453, 820, 910
BspMI ACCTGC 1 cut(s) 537
BspPI GGATC 3 cut(s) 426, 439, 763
BspT107I GGYRCC 3 cut(s) 134, 284, 818
BsrDI GCAATG 1 cut(s) 486
BsrFI RCCGGY 3 cut(s) 19, 230, 500
BsrI ACTGG 1 cut(s) 799
BssAI RCCGGY 3 cut(s) 19, 230, 500
BssECI CCNNGG 5 cut(s) 127, 169, 297, 414, 751
BssMI GATC 7 cut(s) 39, 63, 277, 431, 461, 603, 755
BssNI GRCGYC 2 cut(s) 252, 285
BssT1I CCWWGG 1 cut(s) 414
Bst2UI CCWGG 1 cut(s) 299
Bst4CI ACNGT 2 cut(s) 725, 784
Bst6I CTCTTC 1 cut(s) 278
BstACI GRCGYC 2 cut(s) 252, 285
BstAPI GCANNNNNTGC 1 cut(s) 941
BstC8I GCNNGC 7 cut(s) 99, 166, 228, 232, 289, 565, 569
BstDEI CTNAG 1 cut(s) 987
BstEII GGTNACC 1 cut(s) 641
BstENI CCTNNNNNAGG 1 cut(s) 977
BstF5I GGATG 2 cut(s) 234, 267
BstFNI CGCG 2 cut(s) 318, 333
BstH2I RGCGCY 2 cut(s) 288, 363
BstHHI GCGC 4 cut(s) 287, 320, 333, 362
BstKTI GATC 7 cut(s) 42, 66, 280, 434, 464, 606, 758
BstMBI GATC 7 cut(s) 39, 63, 277, 431, 461, 603, 755
BstMCI CGRYCG 1 cut(s) 27
BstNI CCWGG 1 cut(s) 299
BstNSI RCATGY 2 cut(s) 226, 906
BstPI GGTNACC 1 cut(s) 641
BstSCI CCNGG 4 cut(s) 109, 127, 297, 750
BstSLI GKGCMC 3 cut(s) 78, 139, 823
BstUI CGCG 2 cut(s) 318, 333
BstV1I GCAGC 2 cut(s) 357, 522
BstX2I RGATCY 2 cut(s) 431, 755
BstYI RGATCY 2 cut(s) 431, 755
BsuRI GGCC 7 cut(s) 36, 125, 164, 219, 302, 491, 547
BtgZI GCGATG 1 cut(s) 630
BtsCI GGATG 2 cut(s) 234, 267
BtsIMutI CAGTG 2 cut(s) 78, 789
BveI ACCTGC 1 cut(s) 537
Cac8I GCNNGC 7 cut(s) 99, 166, 228, 232, 289, 565, 569
CfoI GCGC 4 cut(s) 287, 320, 333, 362
Cfr10I RCCGGY 3 cut(s) 19, 230, 500
Cfr13I GGNCC 2 cut(s) 124, 163
CseI GACGC 1 cut(s) 241
Csp6I GTAC 1 cut(s) 17
CspCI CAANNNNNGTGG 2 cut(s) 468, 503
CviAII CATG 5 cut(s) 223, 340, 456, 773, 903
CviQI GTAC 1 cut(s) 17
DdeI CTNAG 1 cut(s) 987
DinI GGCGCC 1 cut(s) 286
DpnI GATC 7 cut(s) 41, 65, 279, 433, 463, 605, 757
DpnII GATC 7 cut(s) 39, 63, 277, 431, 461, 603, 755
EaeI YGGCCR 3 cut(s) 217, 489, 545
Eam1104I CTCTTC 1 cut(s) 278
EarI CTCTTC 1 cut(s) 278
EciI GGCGGA 2 cut(s) 116, 400
Ecl136II GAGCTC 2 cut(s) 388, 400
Eco130I CCWWGG 1 cut(s) 414
Eco147I AGGCCT 1 cut(s) 36
Eco24I GRGCYC 2 cut(s) 390, 402
Eco53kI GAGCTC 2 cut(s) 388, 400
Eco57I CTGAAG 2 cut(s) 260, 981
Eco91I GGTNACC 1 cut(s) 641
EcoICRI GAGCTC 2 cut(s) 388, 400
EcoNI CCTNNNNNAGG 1 cut(s) 977
EcoO109I RGGNCCY 1 cut(s) 124
EcoO65I GGTNACC 1 cut(s) 641
EcoRII CCWGG 1 cut(s) 297
EcoT14I CCWWGG 1 cut(s) 414
EcoT22I ATGCAT 2 cut(s) 670, 904
EcoT38I GRGCYC 2 cut(s) 390, 402
EgeI GGCGCC 1 cut(s) 286
EheI GGCGCC 1 cut(s) 286
ErhI CCWWGG 1 cut(s) 414
FaeI CATG 5 cut(s) 226, 343, 459, 776, 906
FalI AAGNNNNNCTT 2 cut(s) 674, 706
FatI CATG 5 cut(s) 222, 339, 455, 772, 902
FauI CCCGC 3 cut(s) 167, 173, 296
FauNDI CATATG 1 cut(s) 584
FbaI TGATCA 1 cut(s) 603
Fnu4HI GCNGC 5 cut(s) 183, 371, 533, 536, 539
FokI GGATG 2 cut(s) 221, 254
FriOI GRGCYC 2 cut(s) 390, 402
Fsp4HI GCNGC 5 cut(s) 183, 371, 533, 536, 539
FspBI CTAG 1 cut(s) 357
GlaI GCGC 4 cut(s) 286, 319, 332, 361
GluI GCNGC 5 cut(s) 183, 371, 533, 536, 539
GsaI CCCAGC 1 cut(s) 954
HaeII RGCGCY 2 cut(s) 288, 363
HaeIII GGCC 7 cut(s) 36, 125, 164, 219, 302, 491, 547
HapII CCGG 8 cut(s) 20, 27, 110, 129, 231, 258, 501, 751
HgaI GACGC 1 cut(s) 241
HhaI GCGC 4 cut(s) 287, 320, 333, 362
Hin1I GRCGYC 2 cut(s) 252, 285
Hin1II CATG 5 cut(s) 226, 343, 459, 776, 906
Hin6I GCGC 4 cut(s) 285, 318, 331, 360
HinP1I GCGC 4 cut(s) 285, 318, 331, 360
HindIII AAGCTT 2 cut(s) 439, 963
HinfI GANTC 4 cut(s) 83, 673, 806, 956
HpaII CCGG 8 cut(s) 20, 27, 110, 129, 231, 258, 501, 751
HphI GGTGA 4 cut(s) 247, 728, 815, 961
Hpy166II GTNNAC 1 cut(s) 787
Hpy188I TCNGA 2 cut(s) 194, 961
Hpy188III TCNNGA 5 cut(s) 43, 238, 307, 607, 857
Hpy8I GTNNAC 1 cut(s) 787
Hpy99I CGWCG 5 cut(s) 194, 209, 212, 326, 386
HpyAV CCTTC 7 cut(s) 172, 313, 586, 676, 778, 922, 956
HpyCH4III ACNGT 2 cut(s) 725, 784
HpyCH4IV ACGT 1 cut(s) 147
HpyCH4V TGCA 7 cut(s) 459, 506, 668, 729, 830, 896, 902
HpyF3I CTNAG 1 cut(s) 987
HpySE526I ACGT 1 cut(s) 147
Hsp92I GRCGYC 2 cut(s) 252, 285
Hsp92II CATG 5 cut(s) 226, 343, 459, 776, 906
HspAI GCGC 4 cut(s) 285, 318, 331, 360
KasI GGCGCC 1 cut(s) 284
KroI GCCGGC 1 cut(s) 230
KroNI GCCGGC 1 cut(s) 232
Ksp22I TGATCA 1 cut(s) 603
Kzo9I GATC 7 cut(s) 39, 63, 277, 431, 461, 603, 755
LmnI GCTCC 8 cut(s) 112, 397, 451, 622, 702, 908, 932, 983
Lsp1109I GCAGC 2 cut(s) 357, 522
LweI GCATC 4 cut(s) 48, 243, 276, 487
MaeI CTAG 1 cut(s) 357
MaeII ACGT 1 cut(s) 147
MaeIII GTNAC 4 cut(s) 253, 307, 641, 706
MalI GATC 7 cut(s) 41, 65, 279, 433, 463, 605, 757
MboI GATC 7 cut(s) 39, 63, 277, 431, 461, 603, 755
MboII GAAGA 2 cut(s) 265, 872
MflI RGATCY 2 cut(s) 431, 755
MhlI GDGCHC 5 cut(s) 78, 139, 390, 402, 823
MlsI TGGCCA 1 cut(s) 491
MluCI AATT 2 cut(s) 651, 890
MluNI TGGCCA 1 cut(s) 491
Mly113I GGCGCC 1 cut(s) 285
MlyI GAGTC 2 cut(s) 667, 965
MmeI TCCRAC 1 cut(s) 172
Mox20I TGGCCA 1 cut(s) 491
Mph1103I ATGCAT 2 cut(s) 670, 904
MroNI GCCGGC 1 cut(s) 230
MscI TGGCCA 1 cut(s) 491
Msp20I TGGCCA 1 cut(s) 491
MspA1I CMGCKG 1 cut(s) 541
MspI CCGG 8 cut(s) 20, 27, 110, 129, 231, 258, 501, 751
MspR9I CCNGG 4 cut(s) 111, 129, 299, 752
Mva1269I GAATGC 1 cut(s) 670
MvaI CCWGG 1 cut(s) 299
MvnI CGCG 2 cut(s) 318, 333
NaeI GCCGGC 1 cut(s) 232
NarI GGCGCC 1 cut(s) 285
NciI CCSGG 3 cut(s) 111, 129, 752
NdeI CATATG 1 cut(s) 584
NdeII GATC 7 cut(s) 39, 63, 277, 431, 461, 603, 755
NgoMIV GCCGGC 1 cut(s) 230
NlaIII CATG 5 cut(s) 226, 343, 459, 776, 906
NlaIV GGNNCC 8 cut(s) 108, 126, 136, 286, 433, 453, 820, 910
NmeAIII GCCGAG 2 cut(s) 150, 180
NmuCI GTSAC 3 cut(s) 253, 307, 706
NsiI ATGCAT 2 cut(s) 670, 904
NspI RCATGY 2 cut(s) 226, 906
PceI AGGCCT 1 cut(s) 36
PcsI WCGNNNNNNNCGW 2 cut(s) 207, 330
PctI GAATGC 1 cut(s) 670
PdiI GCCGGC 1 cut(s) 232
PfeI GAWTC 2 cut(s) 83, 806
PkrI GCNGC 5 cut(s) 184, 372, 534, 537, 540
PleI GAGTC 2 cut(s) 667, 964
PluTI GGCGCC 1 cut(s) 288
PpsI GAGTC 2 cut(s) 667, 964
Psp124BI GAGCTC 2 cut(s) 390, 402
Psp6I CCWGG 1 cut(s) 297
PspEI GGTNACC 1 cut(s) 641
PspFI CCCAGC 1 cut(s) 950
PspGI CCWGG 1 cut(s) 297
PspN4I GGNNCC 8 cut(s) 108, 126, 136, 286, 433, 453, 820, 910
PspPI GGNCC 2 cut(s) 124, 163
PsuI RGATCY 2 cut(s) 431, 755
RsaI GTAC 1 cut(s) 18
RsaNI GTAC 1 cut(s) 17
SacI GAGCTC 2 cut(s) 390, 402
SatI GCNGC 5 cut(s) 183, 371, 533, 536, 539
Sau3AI GATC 7 cut(s) 39, 63, 277, 431, 461, 603, 755
Sau96I GGNCC 2 cut(s) 124, 163
SchI GAGTC 2 cut(s) 667, 965
ScrFI CCNGG 4 cut(s) 111, 129, 299, 752
SduI GDGCHC 5 cut(s) 78, 139, 390, 402, 823
SfaNI GCATC 4 cut(s) 48, 243, 276, 487
SfoI GGCGCC 1 cut(s) 286
SmlI CTYRAG 3 cut(s) 119, 374, 626
SmoI CTYRAG 3 cut(s) 119, 374, 626
Sse9I AATT 2 cut(s) 651, 890
SseBI AGGCCT 1 cut(s) 36
SspDI GGCGCC 1 cut(s) 284
SspMI CTAG 1 cut(s) 357
SstI GAGCTC 2 cut(s) 390, 402
StuI AGGCCT 1 cut(s) 36
StyD4I CCNGG 4 cut(s) 109, 127, 297, 750
StyI CCWWGG 1 cut(s) 414
TaaI ACNGT 2 cut(s) 725, 784
TaiI ACGT 1 cut(s) 150
TaqI TCGA 2 cut(s) 66, 276
TasI AATT 2 cut(s) 651, 890
TauI GCSGC 3 cut(s) 185, 535, 541
TfiI GAWTC 2 cut(s) 83, 806
TscAI CASTG 2 cut(s) 85, 789
TseFI GTSAC 3 cut(s) 253, 307, 706
TseI GCWGC 2 cut(s) 370, 535
Tsp45I GTSAC 3 cut(s) 253, 307, 706
TspDTI ATGAA 2 cut(s) 328, 798
TspGWI ACGGA 1 cut(s) 339
TspRI CASTG 2 cut(s) 85, 789
XagI CCTNNNNNAGG 1 cut(s) 977
XapI RAATTY 1 cut(s) 890
XceI RCATGY 2 cut(s) 226, 906
XspI CTAG 1 cut(s) 357
Zsp2I ATGCAT 2 cut(s) 670, 904
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.