Rh4CG146600

Belongs to the carbohydrate kinase PfkB family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
32321142 .. 32323834
2693 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG146600.1

Sequence Viewer

Length: 1059 bp
ATGCTTTGCGATCAGATCCCTCCTCTATCTTGCCGTACCCACCAAACCCTCCTCTCTCTCTCTCGGTCTCTCAGAAATCAAGTCTTCATGGCTAACGACAAGGGTCTGATCGTGAGTTTCGGGGAGATGCTGATCGACTTCGTGCCCACCGCTTCGGGCGTTTCGCTGGCCGAAGCCCCGGGGTTCTTGAAAGCCCCCGGTGGTGCCCCCGCCAACGTCGCCATCGCCGTGGCTCGGCTCGGCGGCCACGCCTCCTTCGTCGGCAAACTCGGCGACGACGAGTTCGGCCACATGCTCGCCGGAATCTTGAAGGAGAACGGCGTGACGGGAGATGGCATCCTGTTCGACCAAGGCGCGCGCACCGCTCTGGCCTTCGTGACCCTACGCGCCGACGGAGAGCGTGAGTTCATGTTCTACCGGAACCCTAGCGCCGATATGCTGCTCAAGCCCGAAGAGCTCAATTTCGAGCTCATCAGATCGGCCAAAGTGTTCCACTATGGATCAATAAGCTTGATCGTGGAGCCATGCAGGTCGGCACATCTAAAGGCAATGGAGGTTGCCAAAGATGCCGGTGCCTTGCTCTCTTATGACCCTAACCTCCGGCTACCACTGTGGCCCTCACCTAAGGAGGCACGCGAGCAGATATTGAGTATATGGGAAAAGGCTGAAGTGATCAAGGTCAGCGATGTGGAGCTCGAGTTCCTCACAGGAAATGACAGTATTGATGATGAAAATGCACTGACTCTATGGCACTCTAACTTGAAGCTCCTCCTTGTCACTCTTGGTGAGAATGGTTGCAAATACTACACTAAGAATTTCCGTGGATCTGTGGAAGCTTTCCATGTAACTGCGGTTGATACTACTGGTGCTGGTGATGCATTTGTGGGTGCTCTTCTCACAAAGATTGTTGATGACCAATCCATTCTTGAGGATGAGCCAAGATTGAGGGAAGTACTCAAATTTGCAAATGCATGTGGAGCAATTACAACTACTAAGAAGGGAGCAATTCCTGCACTCCCCACTGGGTCTGATGCCCTCGCCCTAATCAAAGGGGCATAG

Protein Analysis

352

Amino Acids

37.9

Weight (kDa)

5.28

Isoelectric Point (pI)

24.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PfkB PF00294 36 - 341 1.7e-71 pfkB family carbohydrate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 519
AccB1I GGYRCC 2 cut(s) 203, 572
AccBSI CCGCTC 1 cut(s) 365
AccII CGCG 4 cut(s) 356, 358, 387, 636
AciI CCGC 5 cut(s) 150, 210, 243, 363, 851
AclWI GGATC 3 cut(s) 10, 508, 832
AcoI YGGCCR 4 cut(s) 168, 244, 286, 480
AcsI RAATTY 2 cut(s) 814, 959
AcuI CTGAAG 1 cut(s) 687
AfaI GTAC 2 cut(s) 37, 954
AfiI CCNNNNNNNGG 1 cut(s) 234
AgsI TTSAA 3 cut(s) 190, 310, 763
AloI GAACNNNNNNTCC 2 cut(s) 683, 715
AluBI AGCT 6 cut(s) 457, 469, 510, 694, 766, 836
AluI AGCT 6 cut(s) 457, 469, 510, 694, 766, 836
Alw21I GWGCWC 4 cut(s) 459, 471, 696, 892
Alw26I GTCTC 1 cut(s) 72
AlwI GGATC 3 cut(s) 10, 508, 832
Ama87I CYCGRG 2 cut(s) 178, 695
AoxI GGCC 6 cut(s) 168, 244, 286, 369, 480, 614
ApeKI GCWGC 1 cut(s) 439
ApoI RAATTY 2 cut(s) 814, 959
ArsI GACNNNNNNTTYG 2 cut(s) 266, 298
AspLEI GCGC 5 cut(s) 356, 358, 360, 389, 431
AspS9I GGNCC 1 cut(s) 615
AsuC2I CCSGG 3 cut(s) 179, 180, 198
AsuHPI GGTGA 3 cut(s) 612, 797, 884
AvaI CYCGRG 2 cut(s) 178, 695
AxyI CCTNAGG 1 cut(s) 624
BaeGI GKGCMC 2 cut(s) 147, 208
BanI GGYRCC 2 cut(s) 203, 572
BanII GRGCYC 3 cut(s) 459, 471, 696
BbsI GAAGAC 1 cut(s) 76
Bbv12I GWGCWC 4 cut(s) 459, 471, 696, 892
BbvI GCAGC 1 cut(s) 426
BccI CCATC 2 cut(s) 230, 326
BceAI ACGGC 3 cut(s) 18, 212, 334
BcgI CGANNNNNNTGC 2 cut(s) 325, 359
BclI TGATCA 1 cut(s) 672
BcnI CCSGG 3 cut(s) 179, 180, 198
BcoDI GTCTC 1 cut(s) 72
BfaI CTAG 1 cut(s) 426
BfoI RGCGCY 1 cut(s) 432
BfuAI ACCTGC 1 cut(s) 519
BisI GCNGC 2 cut(s) 244, 440
BlsI GCNGC 2 cut(s) 245, 441
BmcAI AGTACT 1 cut(s) 954
Bme1390I CCNGG 3 cut(s) 179, 180, 198
BmeT110I CYCGRG 2 cut(s) 178, 695
BmgT120I GGNCC 1 cut(s) 615
BmiI GGNNCC 4 cut(s) 205, 422, 522, 574
BmrFI CCNGG 3 cut(s) 179, 180, 198
BmrI ACTGGG 1 cut(s) 1032
BmsI GCATC 5 cut(s) 117, 345, 556, 865, 1021
BmuI ACTGGG 1 cut(s) 1032
BoxI GACNNNNGTC 1 cut(s) 102
BpiI GAAGAC 1 cut(s) 76
BpuEI CTTGAG 2 cut(s) 428, 947
BpuMI CCSGG 3 cut(s) 179, 180, 198
BsaBI GATNNNNATC 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 72
BsaJI CCNNGG 7 cut(s) 177, 178, 179, 196, 228, 349, 820
BsaWI WCCGGW 1 cut(s) 417
BsaXI ACNNNNNCTCC 2 cut(s) 683, 713
Bsc4I CCNNNNNNNGG 1 cut(s) 234
Bse118I RCCGGY 1 cut(s) 569
Bse1I ACTGG 2 cut(s) 868, 1027
Bse21I CCTNAGG 1 cut(s) 624
Bse3DI GCAATG 1 cut(s) 555
Bse8I GATNNNNATC 1 cut(s) 131
BseDI CCNNGG 7 cut(s) 177, 178, 179, 196, 228, 349, 820
BseGI GGATG 2 cut(s) 336, 937
BseJI GATNNNNATC 1 cut(s) 131
BseLI CCNNNNNNNGG 1 cut(s) 234
BseMI GCAATG 1 cut(s) 555
BseMII CTCAG 1 cut(s) 85
BseNI ACTGG 2 cut(s) 868, 1027
BsePI GCGCGC 2 cut(s) 354, 356
BseRI GAGGAG 3 cut(s) 12, 41, 758
BseSI GKGCMC 2 cut(s) 147, 208
BseXI GCAGC 1 cut(s) 426
BsgI GTGCAG 1 cut(s) 996
Bsh1236I CGCG 4 cut(s) 356, 358, 387, 636
BshFI GGCC 6 cut(s) 170, 246, 288, 371, 482, 616
BshNI GGYRCC 2 cut(s) 203, 572
BsiHKAI GWGCWC 4 cut(s) 459, 471, 696, 892
BsiHKCI CYCGRG 2 cut(s) 178, 695
BsiSI CCGG 6 cut(s) 179, 198, 300, 418, 570, 601
BslI CCNNNNNNNGG 1 cut(s) 234
BsmAI GTCTC 1 cut(s) 72
BsnI GGCC 6 cut(s) 170, 246, 288, 371, 482, 616
Bso31I GGTCTC 1 cut(s) 72
BsoBI CYCGRG 2 cut(s) 178, 695
Bsp1286I GDGCHC 6 cut(s) 147, 208, 459, 471, 696, 892
Bsp143I GATC 9 cut(s) 10, 15, 108, 132, 476, 500, 513, 672, 824
BspACI CCGC 5 cut(s) 150, 210, 243, 363, 851
BspANI GGCC 6 cut(s) 170, 246, 288, 371, 482, 616
BspCNI CTCAG 1 cut(s) 84
BspFNI CGCG 4 cut(s) 356, 358, 387, 636
BspLI GGNNCC 4 cut(s) 205, 422, 522, 574
BspMI ACCTGC 1 cut(s) 519
BspPI GGATC 3 cut(s) 10, 508, 832
BspQI GCTCTTC 2 cut(s) 447, 897
BspT107I GGYRCC 2 cut(s) 203, 572
BspTNI GGTCTC 1 cut(s) 72
BsrBI CCGCTC 1 cut(s) 365
BsrDI GCAATG 1 cut(s) 555
BsrFI RCCGGY 1 cut(s) 569
BsrI ACTGG 2 cut(s) 868, 1027
BssAI RCCGGY 1 cut(s) 569
BssECI CCNNGG 7 cut(s) 177, 178, 179, 196, 228, 349, 820
BssHII GCGCGC 2 cut(s) 354, 356
BssMI GATC 9 cut(s) 10, 15, 108, 132, 476, 500, 513, 672, 824
BssT1I CCWWGG 1 cut(s) 349
Bst4CI ACNGT 2 cut(s) 612, 719
Bst6I CTCTTC 2 cut(s) 447, 897
BstAPI GCANNNNNTGC 1 cut(s) 1010
BstC8I GCNNGC 6 cut(s) 168, 297, 356, 358, 634, 638
BstDEI CTNAG 4 cut(s) 71, 624, 810, 993
BstDSI CCRYGG 2 cut(s) 228, 820
BstF5I GGATG 2 cut(s) 336, 937
BstFNI CGCG 4 cut(s) 356, 358, 387, 636
BstH2I RGCGCY 1 cut(s) 432
BstHHI GCGC 5 cut(s) 356, 358, 360, 389, 431
BstKTI GATC 9 cut(s) 13, 18, 111, 135, 479, 503, 516, 675, 827
BstMAI GTCTC 1 cut(s) 72
BstMBI GATC 9 cut(s) 10, 15, 108, 132, 476, 500, 513, 672, 824
BstMWI GCNNNNNNNGC 9 cut(s) 218, 270, 362, 445, 454, 566, 875, 977, 1010
BstNSI RCATGY 2 cut(s) 295, 975
BstPAI GACNNNNGTC 1 cut(s) 102
BstSCI CCNGG 3 cut(s) 177, 178, 196
BstSLI GKGCMC 2 cut(s) 147, 208
BstUI CGCG 4 cut(s) 356, 358, 387, 636
BstV1I GCAGC 1 cut(s) 426
BstV2I GAAGAC 1 cut(s) 76
BstX2I RGATCY 2 cut(s) 15, 824
BstXI CCANNNNNNTGG 1 cut(s) 229
BstYI RGATCY 2 cut(s) 15, 824
Bsu36I CCTNAGG 1 cut(s) 624
BsuRI GGCC 6 cut(s) 170, 246, 288, 371, 482, 616
BtgI CCRYGG 2 cut(s) 228, 820
BtgZI GCGATG 2 cut(s) 208, 699
BtsCI GGATG 2 cut(s) 336, 937
BtsIMutI CAGTG 3 cut(s) 608, 737, 1020
BveI ACCTGC 1 cut(s) 519
Cac8I GCNNGC 6 cut(s) 168, 297, 356, 358, 634, 638
CfoI GCGC 5 cut(s) 356, 358, 360, 389, 431
Cfr10I RCCGGY 1 cut(s) 569
Cfr13I GGNCC 1 cut(s) 615
Cfr9I CCCGGG 1 cut(s) 178
Csp6I GTAC 2 cut(s) 36, 953
CviAII CATG 6 cut(s) 88, 292, 409, 525, 842, 972
CviQI GTAC 2 cut(s) 36, 953
DdeI CTNAG 4 cut(s) 71, 624, 810, 993
DpnI GATC 9 cut(s) 12, 17, 110, 134, 478, 502, 515, 674, 826
DpnII GATC 9 cut(s) 10, 15, 108, 132, 476, 500, 513, 672, 824
EaeI YGGCCR 4 cut(s) 168, 244, 286, 480
Eam1104I CTCTTC 2 cut(s) 447, 897
EarI CTCTTC 2 cut(s) 447, 897
Ecl136II GAGCTC 3 cut(s) 457, 469, 694
Eco130I CCWWGG 1 cut(s) 349
Eco24I GRGCYC 3 cut(s) 459, 471, 696
Eco31I GGTCTC 1 cut(s) 72
Eco53kI GAGCTC 3 cut(s) 457, 469, 694
Eco57I CTGAAG 1 cut(s) 687
Eco81I CCTNAGG 1 cut(s) 624
Eco88I CYCGRG 2 cut(s) 178, 695
EcoICRI GAGCTC 3 cut(s) 457, 469, 694
EcoT14I CCWWGG 1 cut(s) 349
EcoT22I ATGCAT 2 cut(s) 880, 973
EcoT38I GRGCYC 3 cut(s) 459, 471, 696
ErhI CCWWGG 1 cut(s) 349
FaeI CATG 6 cut(s) 91, 295, 412, 528, 845, 975
FatI CATG 6 cut(s) 87, 291, 408, 524, 841, 971
FauI CCCGC 1 cut(s) 217
FbaI TGATCA 1 cut(s) 672
Fnu4HI GCNGC 2 cut(s) 244, 440
FokI GGATG 2 cut(s) 323, 944
FriOI GRGCYC 3 cut(s) 459, 471, 696
Fsp4HI GCNGC 2 cut(s) 244, 440
FspBI CTAG 1 cut(s) 426
GlaI GCGC 5 cut(s) 355, 357, 359, 388, 430
GluI GCNGC 2 cut(s) 244, 440
HaeII RGCGCY 1 cut(s) 432
HaeIII GGCC 6 cut(s) 170, 246, 288, 371, 482, 616
HapII CCGG 6 cut(s) 179, 198, 300, 418, 570, 601
HhaI GCGC 5 cut(s) 356, 358, 360, 389, 431
Hin1II CATG 6 cut(s) 91, 295, 412, 528, 845, 975
Hin6I GCGC 5 cut(s) 354, 356, 358, 387, 429
HinP1I GCGC 5 cut(s) 354, 356, 358, 387, 429
HindIII AAGCTT 2 cut(s) 508, 834
HinfI GANTC 2 cut(s) 303, 742
HpaII CCGG 6 cut(s) 179, 198, 300, 418, 570, 601
HphI GGTGA 3 cut(s) 612, 797, 884
Hpy188I TCNGA 5 cut(s) 15, 74, 108, 476, 1030
Hpy188III TCNNGA 5 cut(s) 112, 187, 307, 376, 926
Hpy99I CGWCG 5 cut(s) 221, 263, 278, 281, 395
HpyAV CCTTC 4 cut(s) 265, 304, 382, 991
HpyCH4III ACNGT 2 cut(s) 612, 719
HpyCH4IV ACGT 1 cut(s) 216
HpyCH4V TGCA 7 cut(s) 528, 737, 798, 878, 965, 971, 1013
HpyF10VI GCNNNNNNNGC 9 cut(s) 218, 270, 362, 445, 454, 566, 875, 977, 1010
HpyF3I CTNAG 4 cut(s) 71, 624, 810, 993
HpySE526I ACGT 1 cut(s) 216
Hsp92II CATG 6 cut(s) 91, 295, 412, 528, 845, 975
HspAI GCGC 5 cut(s) 354, 356, 358, 387, 429
Ksp22I TGATCA 1 cut(s) 672
Kzo9I GATC 9 cut(s) 10, 15, 108, 132, 476, 500, 513, 672, 824
LguI GCTCTTC 2 cut(s) 447, 897
LmnI GCTCC 5 cut(s) 520, 691, 771, 977, 1001
Lsp1109I GCAGC 1 cut(s) 426
LweI GCATC 5 cut(s) 117, 345, 556, 865, 1021
MaeI CTAG 1 cut(s) 426
MaeII ACGT 1 cut(s) 216
MaeIII GTNAC 4 cut(s) 322, 376, 775, 844
MalI GATC 9 cut(s) 12, 17, 110, 134, 478, 502, 515, 674, 826
MbiI CCGCTC 1 cut(s) 365
MboI GATC 9 cut(s) 10, 15, 108, 132, 476, 500, 513, 672, 824
MboII GAAGA 3 cut(s) 76, 464, 884
MflI RGATCY 2 cut(s) 15, 824
MhlI GDGCHC 6 cut(s) 147, 208, 459, 471, 696, 892
MluCI AATT 5 cut(s) 460, 814, 959, 981, 1005
MlyI GAGTC 1 cut(s) 736
Mph1103I ATGCAT 2 cut(s) 880, 973
MslI CAYNNNNRTG 1 cut(s) 227
MspI CCGG 6 cut(s) 179, 198, 300, 418, 570, 601
MspR9I CCNGG 3 cut(s) 179, 180, 198
MvnI CGCG 4 cut(s) 356, 358, 387, 636
MwoI GCNNNNNNNGC 9 cut(s) 218, 270, 362, 445, 454, 566, 875, 977, 1010
NciI CCSGG 3 cut(s) 179, 180, 198
NdeII GATC 9 cut(s) 10, 15, 108, 132, 476, 500, 513, 672, 824
NlaIII CATG 6 cut(s) 91, 295, 412, 528, 845, 975
NlaIV GGNNCC 4 cut(s) 205, 422, 522, 574
NmeAIII GCCGAG 3 cut(s) 214, 219, 249
NmuCI GTSAC 3 cut(s) 322, 376, 775
NsiI ATGCAT 2 cut(s) 880, 973
NspI RCATGY 2 cut(s) 295, 975
PaeR7I CTCGAG 1 cut(s) 695
PauI GCGCGC 2 cut(s) 354, 356
PciSI GCTCTTC 2 cut(s) 447, 897
PcsI WCGNNNNNNNCGW 3 cut(s) 225, 255, 276
PfeI GAWTC 1 cut(s) 303
PkrI GCNGC 2 cut(s) 245, 441
PleI GAGTC 1 cut(s) 736
PpsI GAGTC 1 cut(s) 736
PshAI GACNNNNGTC 1 cut(s) 102
Psp124BI GAGCTC 3 cut(s) 459, 471, 696
PspN4I GGNNCC 4 cut(s) 205, 422, 522, 574
PspPI GGNCC 1 cut(s) 615
PspXI VCTCGAGB 1 cut(s) 695
PsuI RGATCY 2 cut(s) 15, 824
PteI GCGCGC 2 cut(s) 354, 356
RsaI GTAC 2 cut(s) 37, 954
RsaNI GTAC 2 cut(s) 36, 953
RseI CAYNNNNRTG 1 cut(s) 227
SacI GAGCTC 3 cut(s) 459, 471, 696
SapI GCTCTTC 2 cut(s) 447, 897
SatI GCNGC 2 cut(s) 244, 440
Sau3AI GATC 9 cut(s) 10, 15, 108, 132, 476, 500, 513, 672, 824
Sau96I GGNCC 1 cut(s) 615
ScaI AGTACT 1 cut(s) 954
SchI GAGTC 1 cut(s) 736
ScrFI CCNGG 3 cut(s) 179, 180, 198
SduI GDGCHC 6 cut(s) 147, 208, 459, 471, 696, 892
SfaNI GCATC 5 cut(s) 117, 345, 556, 865, 1021
Sfr274I CTCGAG 1 cut(s) 695
SlaI CTCGAG 1 cut(s) 695
SmaI CCCGGG 1 cut(s) 180
SmiMI CAYNNNNRTG 1 cut(s) 227
SmlI CTYRAG 3 cut(s) 443, 695, 926
SmoI CTYRAG 3 cut(s) 443, 695, 926
Sse9I AATT 5 cut(s) 460, 814, 959, 981, 1005
SsiI CCGC 5 cut(s) 150, 210, 243, 363, 851
SspMI CTAG 1 cut(s) 426
SstI GAGCTC 3 cut(s) 459, 471, 696
StyD4I CCNGG 3 cut(s) 177, 178, 196
StyI CCWWGG 1 cut(s) 349
TaaI ACNGT 2 cut(s) 612, 719
TaiI ACGT 1 cut(s) 219
TaqI TCGA 4 cut(s) 135, 345, 465, 696
TaqII GACCGA 1 cut(s) 54
TasI AATT 5 cut(s) 460, 814, 959, 981, 1005
TatI WGTACW 1 cut(s) 952
TauI GCSGC 1 cut(s) 246
TfiI GAWTC 1 cut(s) 303
TscAI CASTG 3 cut(s) 615, 744, 1027
TseFI GTSAC 3 cut(s) 322, 376, 775
TseI GCWGC 1 cut(s) 439
Tsp45I GTSAC 3 cut(s) 322, 376, 775
TspDTI ATGAA 3 cut(s) 76, 397, 744
TspGWI ACGGA 2 cut(s) 408, 809
TspMI CCCGGG 1 cut(s) 178
TspRI CASTG 3 cut(s) 615, 744, 1027
XapI RAATTY 2 cut(s) 814, 959
XceI RCATGY 2 cut(s) 295, 975
XhoI CTCGAG 1 cut(s) 695
XmaI CCCGGG 1 cut(s) 178
XspI CTAG 1 cut(s) 426
ZrmI AGTACT 1 cut(s) 954
Zsp2I ATGCAT 2 cut(s) 880, 973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.