Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001761

Physical Location & Seq

Genomic Coordinates Reverse (-)

26039365 .. 26040773

Gene Structure 1409 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G247700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1026 bp

ATGGAGATGAGTCTGGCGACAATAATCTTCACCTTCACCTTCACTTTTTGCACCATCTTTATCATTCCTTGTTCGGAGGCAGCTGAGAAAGGCCAAGGCAACGGCTTGCATGTTGGATTTTATGGAATCAGATGTCCCAATGCGGAGCAAATTGTGGCTGACGTTGTGTCCAAGGCTGTGGAGGCAGACCAAAAGCTCCCCGCTGCCTTTATTCGACTCTTTTCCCATGATTGCTTTGTCAAGGGGTGCGATGCCTCAATTCTGTTGGATTCGACGCCCTCTCATGAGCCTGTTGAGATTCAATCACCAGCCAATGTTGGGATCAAAGGTTTGGAAGTCATTGATGAGATCAAGGCCAGGCTAGAGGCAGAGTGTCCAGAAACCGTCTCTTGCGCTGACATTTTAGCATTTGCTGCTCGGGAAGCCGTGGCTCTCGCCGGCCTACCACGTCACAAAGTCCCCGCAGGCCGTCGCGACAGCCGTACTTCCCGCGCTACTGACGTCACCCTTCCTGCTCCTGCGACACCTCTCAACGAGATCATAGAGTACTTCAGCAGAAGAGGCATGACTTCTGACGAAATTGTTGTCTTGTCTGGTGCACACTCCATTGGCGCTGTCCACTGCAGCTTCTTTGATTACAGGCTGTACAATTACGACCAAACTCAAGCCCAAGACCCTGCCCTGGACCGGTTCTATGCTGCTAATCTGTCTCAACAGTGCCCTGCACCCAACACATTGCCTGAAGCCGAGGCCAAAAACAGGGTTGTTGACTTCGATCCCATAACACCACTCGTCCTGGACAACCAATACTATGCGAACCTGATGCAAGGGAAAGCCTTGCTTCAATCGGATCAGGCTCTGGTTACTGATCCTCGCACCAAAGCTATGGTGATAAGCATGGCTGCTAGTGCTGATTCTTGGACTCAAAGATTTGTTAGGGCCATGATTAAGATGGGGAGAATCAATGTTCTCACTGGAGAGAATGGAGAGATAAGGAAAAACTGCCGGGCCTTTAACCCACTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

342

Amino Acids

37.32

Weight (kDa)

5.35

Isoelectric Point (pI)

42.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001761)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g25120 FvH4_4g25140
malus_domestica	MD13G1097600.v1.1 MD13G1097700.v1.1 MD16G1098700.v1.1 MD16G1098800.v1.1
prunus_persica	Prupe.1G247700_v2.0.a1 Prupe.1G247800_v2.0.a1
pyrus_communis	pycom13g08540
rosa_chinensis	RchiOBHm_Chr4g0432321 RchiOBHm_Chr4g0432331 RchiOBHm_Chr4g0433321 RchiOBHm_Chr4g0433341
rosa_laevigata	RLG00000001640 RLG00000006762 RLG00000006763 RLG00000006853
rosa_multiflora	Rmu_co8257897.1_g000001 Rmu_co8369943.1_g000001 Rmu_sc0000354.1_g000009 Rmu_sc0000354.1_g000012 Rmu_sc0001772.1_g000035
rosa_roxburghii	Rroxscaffold_3G00232110 Rroxscaffold_5G00374880 Rroxscaffold_5G00374910
rosa_rugosa	Rorug04G0257100 Rorug04G0268000
rosa_samantha	Rh4AG313300 Rh4AG322600 Rh4AG322700 Rh4BG320900 Rh4BG330100 Rh4BG330200 Rh4CG336100 Rh4CG345500 Rh4CG345600 Rh4CG345800 Rh4DG316400 Rh4DG316500 Rh4DG326800 Rh4DG326900 Rh7AG394400
rosa_wichuraiana	Rw0G000490 Rw0G023850 Rw4G027240 Rw4G027920 Rw4G027930 Rw7G032840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	504
AccII	CGCG	2 cut(s)	474, 492
AciI	CCGC	4 cut(s)	143, 201, 462, 490
AclWI	GGATC	4 cut(s)	329, 770, 858, 863
AcuI	CTGAAG	2 cut(s)	535, 762
AcyI	GRCGYC	2 cut(s)	275, 501
AfaI	GTAC	3 cut(s)	484, 548, 647
AfiI	CCNNNNNNNGG	4 cut(s)	318, 682, 687, 759
AgeI	ACCGGT	1 cut(s)	687
AgsI	TTSAA	2 cut(s)	302, 845
AhdI	GACNNNNNGTC	1 cut(s)	166
AjiI	CACGTC	1 cut(s)	449
AjnI	CCWGG	3 cut(s)	356, 681, 795
AluBI	AGCT	4 cut(s)	83, 196, 627, 884
AluI	AGCT	4 cut(s)	83, 196, 627, 884
Alw21I	GWGCWC	1 cut(s)	601
Alw26I	GTCTC	2 cut(s)	391, 714
Alw44I	GTGCAC	1 cut(s)	597
AlwI	GGATC	4 cut(s)	329, 770, 858, 863
AlwNI	CAGNNNCTG	1 cut(s)	859
Ama87I	CYCGRG	1 cut(s)	417
AoxI	GGCC	7 cut(s)	91, 354, 439, 466, 750, 939, 1008
ApaLI	GTGCAC	1 cut(s)	597
ApeKI	GCWGC	6 cut(s)	80, 203, 413, 624, 698, 902
ArsI	GACNNNNNNTTYG	2 cut(s)	570, 602
AsiGI	ACCGGT	1 cut(s)	687
AspLEI	GCGC	3 cut(s)	395, 494, 614
AspS9I	GGNCC	3 cut(s)	685, 939, 1008
AsuC2I	CCSGG	1 cut(s)	1007
AsuHPI	GGTGA	5 cut(s)	22, 28, 297, 496, 901
AvaI	CYCGRG	1 cut(s)	417
AvaII	GGWCC	1 cut(s)	685
BaeGI	GKGCMC	2 cut(s)	601, 722
Bbv12I	GWGCWC	1 cut(s)	601
BbvI	GCAGC	6 cut(s)	92, 190, 400, 636, 685, 889
BccI	CCATC	2 cut(s)	62, 946
BceAI	ACGGC	4 cut(s)	118, 410, 453, 465
BcgI	CGANNNNNNTGC	2 cut(s)	805, 839
BciT130I	CCWGG	3 cut(s)	358, 683, 797
BcnI	CCSGG	1 cut(s)	1007
BcoDI	GTCTC	2 cut(s)	391, 714
BfaI	CTAG	2 cut(s)	362, 906
BfmI	CTRYAG	2 cut(s)	622, 1022
BfoI	RGCGCY	1 cut(s)	615
BisI	GCNGC	6 cut(s)	81, 204, 414, 625, 699, 903
BlsI	GCNGC	6 cut(s)	82, 205, 415, 626, 700, 904
BmcAI	AGTACT	1 cut(s)	548
Bme1390I	CCNGG	4 cut(s)	358, 683, 797, 1007
Bme18I	GGWCC	1 cut(s)	685
BmeRI	GACNNNNNGTC	1 cut(s)	166
BmeT110I	CYCGRG	1 cut(s)	417
BmgBI	CACGTC	1 cut(s)	449
BmgT120I	GGNCC	3 cut(s)	685, 939, 1008
BmrFI	CCNGG	4 cut(s)	358, 683, 797, 1007
BmsI	GCATC	2 cut(s)	241, 813
BpmI	CTGGAG	1 cut(s)	996
BpuEI	CTTGAG	1 cut(s)	648
BpuMI	CCSGG	1 cut(s)	1007
BsaHI	GRCGYC	2 cut(s)	275, 501
BsaJI	CCNNGG	5 cut(s)	94, 171, 426, 681, 747
BsaWI	WCCGGW	1 cut(s)	687
Bsc4I	CCNNNNNNNGG	4 cut(s)	318, 682, 687, 759
Bse118I	RCCGGY	2 cut(s)	437, 687
Bse1I	ACTGG	1 cut(s)	979
Bse3DI	GCAATG	1 cut(s)	734
BseBI	CCWGG	3 cut(s)	358, 683, 797
BseDI	CCNNGG	5 cut(s)	94, 171, 426, 681, 747
BseLI	CCNNNNNNNGG	4 cut(s)	318, 682, 687, 759
BseMI	GCAATG	1 cut(s)	734
BseMII	CTCAG	1 cut(s)	75
BseNI	ACTGG	1 cut(s)	979
BseSI	GKGCMC	2 cut(s)	601, 722
BseXI	GCAGC	6 cut(s)	92, 190, 400, 636, 685, 889
BsgI	GTGCAG	1 cut(s)	708
Bsh1236I	CGCG	2 cut(s)	474, 492
BshFI	GGCC	7 cut(s)	93, 356, 441, 468, 752, 941, 1010
BshTI	ACCGGT	1 cut(s)	687
BsiHKAI	GWGCWC	1 cut(s)	601
BsiHKCI	CYCGRG	1 cut(s)	417
BsiSI	CCGG	3 cut(s)	438, 688, 1006
BslFI	GGGAC	2 cut(s)	120, 443
BslI	CCNNNNNNNGG	4 cut(s)	318, 682, 687, 759
BsmAI	GTCTC	2 cut(s)	391, 714
BsmBI	CGTCTC	1 cut(s)	391
BsmFI	GGGAC	2 cut(s)	120, 443
BsnI	GGCC	7 cut(s)	93, 356, 441, 468, 752, 941, 1010
BsoBI	CYCGRG	1 cut(s)	417
Bsp1286I	GDGCHC	2 cut(s)	601, 722
Bsp1407I	TGTACA	1 cut(s)	645
Bsp143I	GATC	6 cut(s)	321, 348, 537, 775, 850, 868
Bsp68I	TCGCGA	1 cut(s)	474
BspACI	CCGC	4 cut(s)	143, 201, 462, 490
BspANI	GGCC	7 cut(s)	93, 356, 441, 468, 752, 941, 1010
BspCNI	CTCAG	1 cut(s)	76
BspFNI	CGCG	2 cut(s)	474, 492
BspHI	TCATGA	1 cut(s)	283
BspMAI	CTGCAG	1 cut(s)	626
BspPI	GGATC	4 cut(s)	329, 770, 858, 863
BsrDI	GCAATG	1 cut(s)	734
BsrFI	RCCGGY	2 cut(s)	437, 687
BsrGI	TGTACA	1 cut(s)	645
BsrI	ACTGG	1 cut(s)	979
BssAI	RCCGGY	2 cut(s)	437, 687
BssECI	CCNNGG	5 cut(s)	94, 171, 426, 681, 747
BssMI	GATC	6 cut(s)	321, 348, 537, 775, 850, 868
BssNI	GRCGYC	2 cut(s)	275, 501
BssT1I	CCWWGG	2 cut(s)	94, 171
Bst2UI	CCWGG	3 cut(s)	358, 683, 797
Bst4CI	ACNGT	2 cut(s)	385, 717
Bst6I	CTCTTC	1 cut(s)	553
BstACI	GRCGYC	2 cut(s)	275, 501
BstAPI	GCANNNNNTGC	1 cut(s)	413
BstAUI	TGTACA	1 cut(s)	645
BstC8I	GCNNGC	3 cut(s)	107, 439, 466
BstDEI	CTNAG	1 cut(s)	84
BstDSI	CCRYGG	1 cut(s)	426
BstFNI	CGCG	2 cut(s)	474, 492
BstH2I	RGCGCY	1 cut(s)	615
BstHHI	GCGC	3 cut(s)	395, 494, 614
BstKTI	GATC	6 cut(s)	324, 351, 540, 778, 853, 871
BstMAI	GTCTC	2 cut(s)	391, 714
BstMBI	GATC	6 cut(s)	321, 348, 537, 775, 850, 868
BstMWI	GCNNNNNNNGC	5 cut(s)	182, 413, 422, 561, 908
BstNI	CCWGG	3 cut(s)	358, 683, 797
BstNSI	RCATGY	1 cut(s)	113
BstSCI	CCNGG	4 cut(s)	356, 681, 795, 1005
BstSFI	CTRYAG	2 cut(s)	622, 1022
BstSLI	GKGCMC	2 cut(s)	601, 722
BstUI	CGCG	2 cut(s)	474, 492
BstV1I	GCAGC	6 cut(s)	92, 190, 400, 636, 685, 889
BstXI	CCANNNNNNTGG	2 cut(s)	178, 886
BsuRI	GGCC	7 cut(s)	93, 356, 441, 468, 752, 941, 1010
BtgI	CCRYGG	1 cut(s)	426
BtgZI	GCGATG	1 cut(s)	264
BtrI	CACGTC	1 cut(s)	449
BtsI	GCAGTG	1 cut(s)	619
BtsIMutI	CAGTG	3 cut(s)	619, 722, 972
BtuMI	TCGCGA	1 cut(s)	474
Cac8I	GCNNGC	3 cut(s)	107, 439, 466
CaiI	CAGNNNCTG	1 cut(s)	859
CciI	TCATGA	1 cut(s)	283
CfoI	GCGC	3 cut(s)	395, 494, 614
Cfr10I	RCCGGY	2 cut(s)	437, 687
Cfr13I	GGNCC	3 cut(s)	685, 939, 1008
CseI	GACGC	1 cut(s)	283
Csp6I	GTAC	3 cut(s)	483, 547, 646
CspAI	ACCGGT	1 cut(s)	687
CviAII	CATG	6 cut(s)	110, 227, 284, 565, 898, 943
CviQI	GTAC	3 cut(s)	483, 547, 646
DdeI	CTNAG	1 cut(s)	84
DpnI	GATC	6 cut(s)	323, 350, 539, 777, 852, 870
DpnII	GATC	6 cut(s)	321, 348, 537, 775, 850, 868
DriI	GACNNNNNGTC	1 cut(s)	166
Eam1104I	CTCTTC	1 cut(s)	553
Eam1105I	GACNNNNNGTC	1 cut(s)	166
EarI	CTCTTC	1 cut(s)	553
Eco130I	CCWWGG	2 cut(s)	94, 171
Eco47I	GGWCC	1 cut(s)	685
Eco57I	CTGAAG	2 cut(s)	535, 762
Eco88I	CYCGRG	1 cut(s)	417
EcoRII	CCWGG	3 cut(s)	356, 681, 795
EcoT14I	CCWWGG	2 cut(s)	94, 171
ErhI	CCWWGG	2 cut(s)	94, 171
Esp3I	CGTCTC	1 cut(s)	391
FaeI	CATG	6 cut(s)	113, 230, 287, 568, 901, 946
FalI	AAGNNNNNCTT	2 cut(s)	825, 857
FaqI	GGGAC	2 cut(s)	120, 443
FatI	CATG	6 cut(s)	109, 226, 283, 564, 897, 942
FauI	CCCGC	3 cut(s)	208, 469, 497
Fnu4HI	GCNGC	6 cut(s)	81, 204, 414, 625, 699, 903
Fsp4HI	GCNGC	6 cut(s)	81, 204, 414, 625, 699, 903
FspBI	CTAG	2 cut(s)	362, 906
GlaI	GCGC	3 cut(s)	394, 493, 613
GluI	GCNGC	6 cut(s)	81, 204, 414, 625, 699, 903
GsuI	CTGGAG	1 cut(s)	996
HaeII	RGCGCY	1 cut(s)	615
HaeIII	GGCC	7 cut(s)	93, 356, 441, 468, 752, 941, 1010
HapII	CCGG	3 cut(s)	438, 688, 1006
HgaI	GACGC	1 cut(s)	283
HhaI	GCGC	3 cut(s)	395, 494, 614
Hin1I	GRCGYC	2 cut(s)	275, 501
Hin1II	CATG	6 cut(s)	113, 230, 287, 568, 901, 946
Hin6I	GCGC	3 cut(s)	393, 492, 612
HinP1I	GCGC	3 cut(s)	393, 492, 612
HincII	GTYRAC	1 cut(s)	769
HindII	GTYRAC	1 cut(s)	769
HinfI	GANTC	8 cut(s)	10, 126, 216, 269, 298, 914, 922, 960
HpaII	CCGG	3 cut(s)	438, 688, 1006
HphI	GGTGA	5 cut(s)	22, 28, 297, 496, 901
Hpy166II	GTNNAC	3 cut(s)	599, 619, 769
Hpy188I	TCNGA	4 cut(s)	76, 131, 574, 850
Hpy188III	TCNNGA	4 cut(s)	284, 377, 419, 473
Hpy8I	GTNNAC	3 cut(s)	599, 619, 769
Hpy99I	CGWCG	2 cut(s)	277, 474
HpyAV	CCTTC	3 cut(s)	43, 49, 518
HpyCH4III	ACNGT	2 cut(s)	385, 717
HpyCH4IV	ACGT	3 cut(s)	162, 448, 501
HpyCH4V	TGCA	6 cut(s)	51, 109, 599, 624, 725, 826
HpyF10VI	GCNNNNNNNGC	5 cut(s)	182, 413, 422, 561, 908
HpyF3I	CTNAG	1 cut(s)	84
HpySE526I	ACGT	3 cut(s)	162, 448, 501
Hsp92I	GRCGYC	2 cut(s)	275, 501
Hsp92II	CATG	6 cut(s)	113, 230, 287, 568, 901, 946
HspAI	GCGC	3 cut(s)	393, 492, 612
KroI	GCCGGC	1 cut(s)	437
KroNI	GCCGGC	1 cut(s)	439
Kzo9I	GATC	6 cut(s)	321, 348, 537, 775, 850, 868
LmnI	GCTCC	3 cut(s)	145, 201, 520
Lsp1109I	GCAGC	6 cut(s)	92, 190, 400, 636, 685, 889
LweI	GCATC	2 cut(s)	241, 813
MaeI	CTAG	2 cut(s)	362, 906
MaeII	ACGT	3 cut(s)	162, 448, 501
MaeIII	GTNAC	3 cut(s)	449, 502, 862
MalI	GATC	6 cut(s)	323, 350, 539, 777, 852, 870
MboI	GATC	6 cut(s)	321, 348, 537, 775, 850, 868
MboII	GAAGA	2 cut(s)	19, 570
MhlI	GDGCHC	2 cut(s)	601, 722
MluCI	AATT	4 cut(s)	150, 258, 579, 649
MlyI	GAGTC	3 cut(s)	19, 210, 916
MmeI	TCCRAC	2 cut(s)	94, 246
MnlI	CCTC	9 cut(s)	70, 175, 265, 289, 358, 537, 554, 742, 882
MroNI	GCCGGC	1 cut(s)	437
MseI	TTAA	2 cut(s)	948, 1014
MspA1I	CMGCKG	2 cut(s)	83, 203
MspI	CCGG	3 cut(s)	438, 688, 1006
MspR9I	CCNGG	4 cut(s)	358, 683, 797, 1007
MvaI	CCWGG	3 cut(s)	358, 683, 797
MvnI	CGCG	2 cut(s)	474, 492
MwoI	GCNNNNNNNGC	5 cut(s)	182, 413, 422, 561, 908
NaeI	GCCGGC	1 cut(s)	439
NciI	CCSGG	1 cut(s)	1007
NdeII	GATC	6 cut(s)	321, 348, 537, 775, 850, 868
NgoMIV	GCCGGC	1 cut(s)	437
NlaIII	CATG	6 cut(s)	113, 230, 287, 568, 901, 946
NmeAIII	GCCGAG	1 cut(s)	772
NmuCI	GTSAC	2 cut(s)	449, 502
NruI	TCGCGA	1 cut(s)	474
NspI	RCATGY	1 cut(s)	113
PagI	TCATGA	1 cut(s)	283
PcsI	WCGNNNNNNNCGW	1 cut(s)	478
PdiI	GCCGGC	1 cut(s)	439
PfeI	GAWTC	5 cut(s)	126, 269, 298, 914, 960
PfoI	TCCNGGA	1 cut(s)	795
PinAI	ACCGGT	1 cut(s)	687
PkrI	GCNGC	6 cut(s)	82, 205, 415, 626, 700, 904
PleI	GAGTC	3 cut(s)	18, 210, 916
PpsI	GAGTC	3 cut(s)	18, 210, 916
Psp6I	CCWGG	3 cut(s)	356, 681, 795
PspGI	CCWGG	3 cut(s)	356, 681, 795
PspPI	GGNCC	3 cut(s)	685, 939, 1008
PstI	CTGCAG	1 cut(s)	626
PstNI	CAGNNNCTG	1 cut(s)	859
PvuII	CAGCTG	1 cut(s)	83
RruI	TCGCGA	1 cut(s)	474
RsaI	GTAC	3 cut(s)	484, 548, 647
RsaNI	GTAC	3 cut(s)	483, 547, 646
SaqAI	TTAA	2 cut(s)	948, 1014
SatI	GCNGC	6 cut(s)	81, 204, 414, 625, 699, 903
Sau3AI	GATC	6 cut(s)	321, 348, 537, 775, 850, 868
Sau96I	GGNCC	3 cut(s)	685, 939, 1008
ScaI	AGTACT	1 cut(s)	548
SchI	GAGTC	3 cut(s)	19, 210, 916
ScrFI	CCNGG	4 cut(s)	358, 683, 797, 1007
SduI	GDGCHC	2 cut(s)	601, 722
SfaNI	GCATC	2 cut(s)	241, 813
SfcI	CTRYAG	2 cut(s)	622, 1022
SinI	GGWCC	1 cut(s)	685
SmlI	CTYRAG	1 cut(s)	663
SmoI	CTYRAG	1 cut(s)	663
Sse9I	AATT	4 cut(s)	150, 258, 579, 649
SsiI	CCGC	4 cut(s)	143, 201, 462, 490
SspMI	CTAG	2 cut(s)	362, 906
StyD4I	CCNGG	4 cut(s)	356, 681, 795, 1005
StyI	CCWWGG	2 cut(s)	94, 171
TaaI	ACNGT	2 cut(s)	385, 717
TaiI	ACGT	3 cut(s)	165, 451, 504
TaqI	TCGA	3 cut(s)	214, 272, 774
TasI	AATT	4 cut(s)	150, 258, 579, 649
TatI	WGTACW	2 cut(s)	546, 645
TfiI	GAWTC	5 cut(s)	126, 269, 298, 914, 960
Tru1I	TTAA	2 cut(s)	948, 1014
Tru9I	TTAA	2 cut(s)	948, 1014
TscAI	CASTG	3 cut(s)	626, 722, 979
TseFI	GTSAC	2 cut(s)	449, 502
TseI	GCWGC	6 cut(s)	80, 203, 413, 624, 698, 902
Tsp45I	GTSAC	2 cut(s)	449, 502
TspRI	CASTG	3 cut(s)	626, 722, 979
VneI	GTGCAC	1 cut(s)	597
VpaK11BI	GGWCC	1 cut(s)	685
XceI	RCATGY	1 cut(s)	113
XcmI	CCANNNNNNNNNTGG	1 cut(s)	949
XspI	CTAG	2 cut(s)	362, 906
ZraI	GACGTC	1 cut(s)	502
ZrmI	AGTACT	1 cut(s)	548

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.