Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001761

Physical Location & Seq

Genomic Coordinates Reverse (-)

26047043 .. 26048620

Gene Structure 1578 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G247800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1029 bp

ATGGACATCATGGATCGTCTAATGATCACCACAGCAACCTTCTTCACCTTGTGCATCATCATCACCATCATCGTTCCTTGGTCAGAGGCAGCTGGACAAAGCACTGGGAACGGCTTACGTGTCGGCTTTTACAGCCGCAGTTGCCCAAATGTGGAAAAAATTGTTGCTGACATTGTGTTAAAGGCTCATCAGGATGATCTAAAGCTCCCCGCCGCCCTCATTCGCTTCTTCTCCCACGATTGCTTGGTCAAGGGCTGCGATGCCTCAATTCTTCTGGATGCCACAGCCTCACATGAGCCTGTAGAGAAGCAAGCACAAGCCAGTGAAATGCTTAGAGGTTATGAGCTCATTGATGAGATCAAGGACAGGGTAGAGCAGGAGTGTCCACAAACTGTCTCTTGCGCTGACATACTAGCCTTTGCTGCTCGGGAAGCTGTTTTTCTGGCCGGTCTGCCACGTCACATGGTCCCCTCTGGACGCCGTGACAGTCGGACTTCCCGTGCTTCTGACATCACCATCCCTAACCCTACAACACCTTTCGATGAGATCATAGATTATTTCTCCAGAAGAGGTATCACCATTGACGAAATGGTTGTGTTGAGTGGTGCACATTCCATTGGGATTGCTCATTGCAGCTTCTTTGACTACAGACTCTACACCTTCAACAAAGACCAGCCCCAAGACCCTGCCCTCAACGCATCCTACGCTTCTGAGCTGTCTAAAACGTGCCCAAAACCCAACACATTGAATCCAGCTGAGGCTAAACAGAGAAACGTCGAGTTAGATCCCACAACACCACTCGTCCTGGACAATCACCACTACCTGAACCTGTTGCAAGGGAAAGCCTTGCTTCAGTCGGATCAGACAATGGTTACTGATCCCCGCACCAGCGGATTGGTGCAGCAGTTTGCCTTGGATCCCGAATCTTGGGCTCGAAGATTTGCCAAGGCCATGATTAAGATGGGGAGAATCAATGTTCTCACTGGAAATGTTGGAGAGATAAGGAAAAATTGTCGGGCCATCAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

343

Amino Acids

37.97

Weight (kDa)

5.93

Isoelectric Point (pI)

43.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001761)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g25120 FvH4_4g25140
malus_domestica	MD13G1097600.v1.1 MD13G1097700.v1.1 MD16G1098700.v1.1 MD16G1098800.v1.1
prunus_persica	Prupe.1G247700_v2.0.a1 Prupe.1G247800_v2.0.a1
pyrus_communis	pycom13g08540
rosa_chinensis	RchiOBHm_Chr4g0432321 RchiOBHm_Chr4g0432331 RchiOBHm_Chr4g0433321 RchiOBHm_Chr4g0433341
rosa_laevigata	RLG00000001640 RLG00000006762 RLG00000006763 RLG00000006853
rosa_multiflora	Rmu_co8257897.1_g000001 Rmu_co8369943.1_g000001 Rmu_sc0000354.1_g000009 Rmu_sc0000354.1_g000012 Rmu_sc0001772.1_g000035
rosa_roxburghii	Rroxscaffold_3G00232110 Rroxscaffold_5G00374880 Rroxscaffold_5G00374910
rosa_rugosa	Rorug04G0257100 Rorug04G0268000
rosa_samantha	Rh4AG313300 Rh4AG322600 Rh4AG322700 Rh4BG320900 Rh4BG330100 Rh4BG330200 Rh4CG336100 Rh4CG345500 Rh4CG345600 Rh4CG345800 Rh4DG316400 Rh4DG316500 Rh4DG326800 Rh4DG326900 Rh7AG394400
rosa_wichuraiana	Rw0G000490 Rw0G023850 Rw4G027240 Rw4G027920 Rw4G027930 Rw7G032840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	5 cut(s)	136, 210, 213, 883, 891
AclWI	GGATC	6 cut(s)	21, 779, 867, 872, 911, 924
AcoI	YGGCCR	1 cut(s)	444
AcuI	CTGAAG	1 cut(s)	836
AcyI	GRCGYC	1 cut(s)	478
AdeI	CACNNNGTG	1 cut(s)	51
AfiI	CCNNNNNNNGG	2 cut(s)	151, 927
AflIII	ACRYGT	1 cut(s)	118
AgsI	TTSAA	2 cut(s)	664, 748
AjiI	CACGTC	1 cut(s)	458
AjnI	CCWGG	1 cut(s)	804
AluBI	AGCT	7 cut(s)	92, 205, 346, 434, 636, 715, 755
AluI	AGCT	7 cut(s)	92, 205, 346, 434, 636, 715, 755
Alw21I	GWGCWC	2 cut(s)	348, 610
Alw26I	GTCTC	1 cut(s)	400
Alw44I	GTGCAC	1 cut(s)	606
AlwI	GGATC	6 cut(s)	21, 779, 867, 872, 911, 924
Ama87I	CYCGRG	1 cut(s)	426
AoxI	GGCC	3 cut(s)	444, 948, 1017
ApaLI	GTGCAC	1 cut(s)	606
ApeKI	GCWGC	5 cut(s)	89, 255, 422, 633, 901
AspLEI	GCGC	1 cut(s)	404
AspS9I	GGNCC	2 cut(s)	466, 1017
AsuHPI	GGTGA	6 cut(s)	19, 37, 55, 505, 568, 806
AvaI	CYCGRG	1 cut(s)	426
AvaII	GGWCC	1 cut(s)	466
BaeGI	GKGCMC	2 cut(s)	610, 731
BamHI	GGATCC	1 cut(s)	916
BanII	GRGCYC	2 cut(s)	348, 934
Bbv12I	GWGCWC	2 cut(s)	348, 610
BbvCI	CCTCAGC	1 cut(s)	756
BbvI	GCAGC	5 cut(s)	101, 242, 409, 645, 913
BccI	CCATC	4 cut(s)	74, 524, 955, 1028
BceAI	ACGGC	2 cut(s)	127, 465
BciT130I	CCWGG	1 cut(s)	806
BclI	TGATCA	1 cut(s)	24
BcoDI	GTCTC	1 cut(s)	400
BfaI	CTAG	1 cut(s)	413
BfmI	CTRYAG	2 cut(s)	300, 646
BisI	GCNGC	7 cut(s)	90, 136, 213, 256, 423, 634, 902
BlsI	GCNGC	7 cut(s)	91, 137, 214, 257, 424, 635, 903
Bme1390I	CCNGG	1 cut(s)	806
Bme18I	GGWCC	1 cut(s)	466
BmeT110I	CYCGRG	1 cut(s)	426
BmgBI	CACGTC	1 cut(s)	458
BmgT120I	GGNCC	2 cut(s)	466, 1017
BmiI	GGNNCC	2 cut(s)	468, 918
BmrFI	CCNGG	1 cut(s)	806
BmrI	ACTGGG	1 cut(s)	114
BmsI	GCATC	4 cut(s)	63, 250, 268, 707
BmuI	ACTGGG	1 cut(s)	114
BpmI	CTGGAG	1 cut(s)	547
Bpu10I	CCTNAGC	1 cut(s)	756
BsaAI	YACGTR	1 cut(s)	119
BsaHI	GRCGYC	1 cut(s)	478
BsaJI	CCNNGG	3 cut(s)	77, 912, 945
Bsc4I	CCNNNNNNNGG	2 cut(s)	151, 927
Bse118I	RCCGGY	1 cut(s)	446
Bse1I	ACTGG	3 cut(s)	109, 321, 988
Bse3DI	GCAATG	1 cut(s)	628
BseBI	CCWGG	1 cut(s)	806
BseDI	CCNNGG	3 cut(s)	77, 912, 945
BseGI	GGATG	4 cut(s)	199, 283, 516, 698
BseLI	CCNNNNNNNGG	2 cut(s)	151, 927
BseMI	GCAATG	1 cut(s)	628
BseMII	CTCAG	2 cut(s)	702, 747
BseNI	ACTGG	3 cut(s)	109, 321, 988
BseSI	GKGCMC	2 cut(s)	610, 731
BseXI	GCAGC	5 cut(s)	101, 242, 409, 645, 913
BsgI	GTGCAG	1 cut(s)	920
BshFI	GGCC	3 cut(s)	446, 950, 1019
BsiHKAI	GWGCWC	2 cut(s)	348, 610
BsiHKCI	CYCGRG	1 cut(s)	426
BsiSI	CCGG	1 cut(s)	447
BslFI	GGGAC	1 cut(s)	452
BslI	CCNNNNNNNGG	2 cut(s)	151, 927
BsmAI	GTCTC	1 cut(s)	400
BsmFI	GGGAC	1 cut(s)	452
BsnI	GGCC	3 cut(s)	446, 950, 1019
BsoBI	CYCGRG	1 cut(s)	426
Bsp1286I	GDGCHC	4 cut(s)	348, 610, 731, 934
Bsp143I	GATC	9 cut(s)	13, 24, 196, 357, 546, 784, 859, 877, 916
BspACI	CCGC	5 cut(s)	136, 210, 213, 883, 891
BspANI	GGCC	3 cut(s)	446, 950, 1019
BspCNI	CTCAG	2 cut(s)	703, 748
BspLI	GGNNCC	2 cut(s)	468, 918
BspPI	GGATC	6 cut(s)	21, 779, 867, 872, 911, 924
BsrDI	GCAATG	1 cut(s)	628
BsrFI	RCCGGY	1 cut(s)	446
BsrI	ACTGG	3 cut(s)	109, 321, 988
BssAI	RCCGGY	1 cut(s)	446
BssECI	CCNNGG	3 cut(s)	77, 912, 945
BssMI	GATC	9 cut(s)	13, 24, 196, 357, 546, 784, 859, 877, 916
BssNI	GRCGYC	1 cut(s)	478
BssT1I	CCWWGG	3 cut(s)	77, 912, 945
Bst2UI	CCWGG	1 cut(s)	806
Bst4CI	ACNGT	2 cut(s)	394, 488
Bst6I	CTCTTC	1 cut(s)	562
BstACI	GRCGYC	1 cut(s)	478
BstBAI	YACGTR	1 cut(s)	119
BstC8I	GCNNGC	1 cut(s)	312
BstDEI	CTNAG	3 cut(s)	332, 711, 756
BstF5I	GGATG	4 cut(s)	199, 283, 516, 698
BstHHI	GCGC	1 cut(s)	404
BstKTI	GATC	9 cut(s)	16, 27, 199, 360, 549, 787, 862, 880, 919
BstMAI	GTCTC	1 cut(s)	400
BstMBI	GATC	9 cut(s)	13, 24, 196, 357, 546, 784, 859, 877, 916
BstMWI	GCNNNNNNNGC	6 cut(s)	132, 141, 422, 431, 695, 704
BstNI	CCWGG	1 cut(s)	806
BstSCI	CCNGG	1 cut(s)	804
BstSFI	CTRYAG	2 cut(s)	300, 646
BstSLI	GKGCMC	2 cut(s)	610, 731
BstV1I	GCAGC	5 cut(s)	101, 242, 409, 645, 913
BstX2I	RGATCY	2 cut(s)	784, 916
BstXI	CCANNNNNNTGG	1 cut(s)	895
BstYI	RGATCY	2 cut(s)	784, 916
BsuRI	GGCC	3 cut(s)	446, 950, 1019
BtgZI	GCGATG	1 cut(s)	273
BtrI	CACGTC	1 cut(s)	458
BtsCI	GGATG	4 cut(s)	199, 283, 516, 698
BtsIMutI	CAGTG	3 cut(s)	102, 328, 981
Cac8I	GCNNGC	1 cut(s)	312
CfoI	GCGC	1 cut(s)	404
Cfr10I	RCCGGY	1 cut(s)	446
Cfr13I	GGNCC	2 cut(s)	466, 1017
CseI	GACGC	1 cut(s)	486
CviAII	CATG	4 cut(s)	10, 293, 463, 952
DdeI	CTNAG	3 cut(s)	332, 711, 756
DpnI	GATC	9 cut(s)	15, 26, 198, 359, 548, 786, 861, 879, 918
DpnII	GATC	9 cut(s)	13, 24, 196, 357, 546, 784, 859, 877, 916
DraIII	CACNNNGTG	1 cut(s)	51
EaeI	YGGCCR	1 cut(s)	444
Eam1104I	CTCTTC	1 cut(s)	562
EarI	CTCTTC	1 cut(s)	562
Ecl136II	GAGCTC	1 cut(s)	346
Eco130I	CCWWGG	3 cut(s)	77, 912, 945
Eco24I	GRGCYC	2 cut(s)	348, 934
Eco47I	GGWCC	1 cut(s)	466
Eco53kI	GAGCTC	1 cut(s)	346
Eco57I	CTGAAG	1 cut(s)	836
Eco88I	CYCGRG	1 cut(s)	426
EcoICRI	GAGCTC	1 cut(s)	346
EcoRII	CCWGG	1 cut(s)	804
EcoT14I	CCWWGG	3 cut(s)	77, 912, 945
EcoT38I	GRGCYC	2 cut(s)	348, 934
ErhI	CCWWGG	3 cut(s)	77, 912, 945
FaeI	CATG	4 cut(s)	13, 296, 466, 955
FaiI	YATR	7 cut(s)	11, 294, 342, 410, 464, 551, 953
FalI	AAGNNNNNCTT	2 cut(s)	834, 866
FaqI	GGGAC	1 cut(s)	452
FatI	CATG	4 cut(s)	9, 292, 462, 951
FauI	CCCGC	2 cut(s)	217, 890
FbaI	TGATCA	1 cut(s)	24
Fnu4HI	GCNGC	7 cut(s)	90, 136, 213, 256, 423, 634, 902
FokI	GGATG	4 cut(s)	206, 290, 503, 685
FriOI	GRGCYC	2 cut(s)	348, 934
Fsp4HI	GCNGC	7 cut(s)	90, 136, 213, 256, 423, 634, 902
FspBI	CTAG	1 cut(s)	413
GlaI	GCGC	1 cut(s)	403
GluI	GCNGC	7 cut(s)	90, 136, 213, 256, 423, 634, 902
GsuI	CTGGAG	1 cut(s)	547
HaeIII	GGCC	3 cut(s)	446, 950, 1019
HapII	CCGG	1 cut(s)	447
HgaI	GACGC	1 cut(s)	486
HhaI	GCGC	1 cut(s)	404
Hin1I	GRCGYC	1 cut(s)	478
Hin1II	CATG	4 cut(s)	13, 296, 466, 955
Hin6I	GCGC	1 cut(s)	402
HinP1I	GCGC	1 cut(s)	402
HinfI	GANTC	4 cut(s)	651, 748, 923, 969
HpaII	CCGG	1 cut(s)	447
HphI	GGTGA	6 cut(s)	19, 37, 55, 505, 568, 806
Hpy166II	GTNNAC	2 cut(s)	386, 608
Hpy188I	TCNGA	6 cut(s)	85, 492, 508, 712, 859, 864
Hpy188III	TCNNGA	6 cut(s)	191, 275, 428, 474, 564, 920
Hpy8I	GTNNAC	2 cut(s)	386, 608
Hpy99I	CGWCG	1 cut(s)	779
HpyAV	CCTTC	2 cut(s)	49, 670
HpyCH4III	ACNGT	2 cut(s)	394, 488
HpyCH4IV	ACGT	4 cut(s)	118, 457, 725, 774
HpyCH4V	TGCA	5 cut(s)	54, 608, 633, 835, 901
HpyF10VI	GCNNNNNNNGC	6 cut(s)	132, 141, 422, 431, 695, 704
HpyF3I	CTNAG	3 cut(s)	332, 711, 756
HpySE526I	ACGT	4 cut(s)	118, 457, 725, 774
Hsp92I	GRCGYC	1 cut(s)	478
Hsp92II	CATG	4 cut(s)	13, 296, 466, 955
HspAI	GCGC	1 cut(s)	402
Ksp22I	TGATCA	1 cut(s)	24
Kzo9I	GATC	9 cut(s)	13, 24, 196, 357, 546, 784, 859, 877, 916
LmnI	GCTCC	1 cut(s)	210
Lsp1109I	GCAGC	5 cut(s)	101, 242, 409, 645, 913
LweI	GCATC	4 cut(s)	63, 250, 268, 707
MaeI	CTAG	1 cut(s)	413
MaeII	ACGT	4 cut(s)	118, 457, 725, 774
MaeIII	GTNAC	3 cut(s)	458, 482, 871
MalI	GATC	9 cut(s)	15, 26, 198, 359, 548, 786, 861, 879, 918
MboI	GATC	9 cut(s)	13, 24, 196, 357, 546, 784, 859, 877, 916
MboII	GAAGA	5 cut(s)	34, 220, 263, 579, 948
MflI	RGATCY	2 cut(s)	784, 916
MhlI	GDGCHC	4 cut(s)	348, 610, 731, 934
MluCI	AATT	3 cut(s)	159, 267, 1009
MlyI	GAGTC	1 cut(s)	645
MmeI	TCCRAC	3 cut(s)	470, 837, 973
MnlI	CCTC	9 cut(s)	79, 227, 274, 298, 329, 481, 563, 701, 751
MseI	TTAA	2 cut(s)	179, 957
MslI	CAYNNNNRTG	1 cut(s)	192
MspA1I	CMGCKG	3 cut(s)	92, 755, 891
MspI	CCGG	1 cut(s)	447
MspR9I	CCNGG	1 cut(s)	806
MvaI	CCWGG	1 cut(s)	806
MwoI	GCNNNNNNNGC	6 cut(s)	132, 141, 422, 431, 695, 704
NdeII	GATC	9 cut(s)	13, 24, 196, 357, 546, 784, 859, 877, 916
NlaIII	CATG	4 cut(s)	13, 296, 466, 955
NlaIV	GGNNCC	2 cut(s)	468, 918
NmuCI	GTSAC	2 cut(s)	458, 482
PcsI	WCGNNNNNNNCGW	1 cut(s)	496
PfeI	GAWTC	3 cut(s)	748, 923, 969
PfoI	TCCNGGA	1 cut(s)	804
PkrI	GCNGC	7 cut(s)	91, 137, 214, 257, 424, 635, 903
PleI	GAGTC	1 cut(s)	645
PpsI	GAGTC	1 cut(s)	645
Ppu21I	YACGTR	1 cut(s)	119
Psp124BI	GAGCTC	1 cut(s)	348
Psp6I	CCWGG	1 cut(s)	804
PspGI	CCWGG	1 cut(s)	804
PspN4I	GGNNCC	2 cut(s)	468, 918
PspPI	GGNCC	2 cut(s)	466, 1017
PsuI	RGATCY	2 cut(s)	784, 916
PvuII	CAGCTG	2 cut(s)	92, 755
RseI	CAYNNNNRTG	1 cut(s)	192
SacI	GAGCTC	1 cut(s)	348
SaqAI	TTAA	2 cut(s)	179, 957
SatI	GCNGC	7 cut(s)	90, 136, 213, 256, 423, 634, 902
Sau3AI	GATC	9 cut(s)	13, 24, 196, 357, 546, 784, 859, 877, 916
Sau96I	GGNCC	2 cut(s)	466, 1017
SchI	GAGTC	1 cut(s)	645
ScrFI	CCNGG	1 cut(s)	806
SduI	GDGCHC	4 cut(s)	348, 610, 731, 934
SfaNI	GCATC	4 cut(s)	63, 250, 268, 707
SfcI	CTRYAG	2 cut(s)	300, 646
SinI	GGWCC	1 cut(s)	466
SmiMI	CAYNNNNRTG	1 cut(s)	192
Sse9I	AATT	3 cut(s)	159, 267, 1009
SsiI	CCGC	5 cut(s)	136, 210, 213, 883, 891
SspMI	CTAG	1 cut(s)	413
SstI	GAGCTC	1 cut(s)	348
StyD4I	CCNGG	1 cut(s)	804
StyI	CCWWGG	3 cut(s)	77, 912, 945
TaaI	ACNGT	2 cut(s)	394, 488
TaiI	ACGT	4 cut(s)	121, 460, 728, 777
TaqI	TCGA	3 cut(s)	540, 777, 934
TasI	AATT	3 cut(s)	159, 267, 1009
TauI	GCSGC	2 cut(s)	138, 215
TfiI	GAWTC	3 cut(s)	748, 923, 969
Tru1I	TTAA	2 cut(s)	179, 957
Tru9I	TTAA	2 cut(s)	179, 957
TscAI	CASTG	3 cut(s)	109, 328, 988
TseFI	GTSAC	2 cut(s)	458, 482
TseI	GCWGC	5 cut(s)	89, 255, 422, 633, 901
Tsp45I	GTSAC	2 cut(s)	458, 482
TspRI	CASTG	3 cut(s)	109, 328, 988
VneI	GTGCAC	1 cut(s)	606
VpaK11BI	GGWCC	1 cut(s)	466
XcmI	CCANNNNNNNNNTGG	2 cut(s)	586, 958
XspI	CTAG	1 cut(s)	413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.