Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 108 |
| AarI | CACCTGC | 1 cut(s) | 489 |
| AatII | GACGTC | 1 cut(s) | 250 |
| Acc36I | ACCTGC | 1 cut(s) | 489 |
| AccB1I | GGYRCC | 2 cut(s) | 204, 536 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 996 |
| AccI | GTMKAC | 1 cut(s) | 962 |
| AccII | CGCG | 2 cut(s) | 77, 604 |
| AciI | CCGC | 6 cut(s) | 75, 77, 315, 540, 604, 1142 |
| AclI | AACGTT | 1 cut(s) | 35 |
| AclWI | GGATC | 2 cut(s) | 356, 845 |
| AcoI | YGGCCR | 1 cut(s) | 605 |
| AcsI | RAATTY | 2 cut(s) | 233, 1160 |
| AcvI | CACGTG | 1 cut(s) | 259 |
| AcyI | GRCGYC | 4 cut(s) | 5, 205, 247, 537 |
| AfaI | GTAC | 2 cut(s) | 67, 875 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 76, 568, 638, 715, 996 |
| AflIII | ACRYGT | 1 cut(s) | 258 |
| AgsI | TTSAA | 3 cut(s) | 662, 692, 987 |
| AhlI | ACTAGT | 1 cut(s) | 1028 |
| AjnI | CCWGG | 1 cut(s) | 469 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 835, 867 |
| AluBI | AGCT | 7 cut(s) | 174, 270, 374, 391, 857, 1109, 1127 |
| AluI | AGCT | 7 cut(s) | 174, 270, 374, 391, 857, 1109, 1127 |
| Alw21I | GWGCWC | 1 cut(s) | 272 |
| Alw26I | GTCTC | 1 cut(s) | 27 |
| AlwI | GGATC | 2 cut(s) | 356, 845 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 293 |
| AoxI | GGCC | 5 cut(s) | 187, 312, 434, 605, 776 |
| ApaI | GGGCCC | 1 cut(s) | 191 |
| ApeKI | GCWGC | 8 cut(s) | 129, 132, 135, 317, 461, 722, 830, 865 |
| ApoI | RAATTY | 2 cut(s) | 233, 1160 |
| AspLEI | GCGC | 4 cut(s) | 83, 207, 293, 539 |
| AspS9I | GGNCC | 2 cut(s) | 187, 188 |
| AsuC2I | CCSGG | 1 cut(s) | 569 |
| AsuHPI | GGTGA | 1 cut(s) | 736 |
| BaeGI | GKGCMC | 1 cut(s) | 191 |
| BanI | GGYRCC | 2 cut(s) | 204, 536 |
| BanII | GRGCYC | 5 cut(s) | 191, 256, 272, 523, 645 |
| BbrPI | CACGTG | 1 cut(s) | 259 |
| BbsI | GAAGAC | 2 cut(s) | 267, 1222 |
| Bbv12I | GWGCWC | 1 cut(s) | 272 |
| BbvI | GCAGC | 8 cut(s) | 141, 144, 147, 304, 473, 709, 817, 852 |
| BccI | CCATC | 3 cut(s) | 128, 419, 819 |
| BceAI | ACGGC | 2 cut(s) | 693, 981 |
| BciT130I | CCWGG | 1 cut(s) | 471 |
| BcnI | CCSGG | 1 cut(s) | 569 |
| BcoDI | GTCTC | 1 cut(s) | 27 |
| BcuI | ACTAGT | 1 cut(s) | 1028 |
| BfaI | CTAG | 2 cut(s) | 791, 1029 |
| BfmI | CTRYAG | 1 cut(s) | 831 |
| BfoI | RGCGCY | 3 cut(s) | 208, 294, 540 |
| BfuAI | ACCTGC | 1 cut(s) | 489 |
| BlpI | GCTNAGC | 1 cut(s) | 387 |
| Bme1390I | CCNGG | 2 cut(s) | 471, 569 |
| BmgT120I | GGNCC | 2 cut(s) | 187, 188 |
| BmiI | GGNNCC | 4 cut(s) | 189, 206, 538, 844 |
| BmrFI | CCNGG | 2 cut(s) | 471, 569 |
| BmrI | ACTGGG | 4 cut(s) | 107, 216, 817, 1014 |
| BmsI | GCATC | 5 cut(s) | 92, 290, 568, 1032, 1103 |
| BmuI | ACTGGG | 4 cut(s) | 107, 216, 817, 1014 |
| BoxI | GACNNNNGTC | 1 cut(s) | 899 |
| BpiI | GAAGAC | 2 cut(s) | 267, 1222 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 358, 390 |
| BpmI | CTGGAG | 2 cut(s) | 453, 903 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 387 |
| BpuEI | CTTGAG | 1 cut(s) | 765 |
| BpuMI | CCSGG | 1 cut(s) | 569 |
| BsaAI | YACGTR | 1 cut(s) | 259 |
| BsaHI | GRCGYC | 4 cut(s) | 5, 205, 247, 537 |
| BsaJI | CCNNGG | 4 cut(s) | 75, 321, 365, 582 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 208, 238 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 76, 568, 638, 715, 996 |
| Bse118I | RCCGGY | 1 cut(s) | 207 |
| Bse1I | ACTGG | 4 cut(s) | 113, 222, 812, 1009 |
| Bse3DI | GCAATG | 1 cut(s) | 145 |
| BseBI | CCWGG | 1 cut(s) | 471 |
| BseDI | CCNNGG | 4 cut(s) | 75, 321, 365, 582 |
| BseGI | GGATG | 4 cut(s) | 83, 281, 830, 1136 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 76, 568, 638, 715, 996 |
| BseMI | GCAATG | 1 cut(s) | 145 |
| BseMII | CTCAG | 3 cut(s) | 256, 285, 1047 |
| BseNI | ACTGG | 4 cut(s) | 113, 222, 812, 1009 |
| BseRI | GAGGAG | 1 cut(s) | 280 |
| BseSI | GKGCMC | 1 cut(s) | 191 |
| BseXI | GCAGC | 8 cut(s) | 141, 144, 147, 304, 473, 709, 817, 852 |
| BseYI | CCCAGC | 1 cut(s) | 184 |
| Bsh1236I | CGCG | 2 cut(s) | 77, 604 |
| BshFI | GGCC | 5 cut(s) | 189, 314, 436, 607, 778 |
| BshNI | GGYRCC | 2 cut(s) | 204, 536 |
| BsiHKAI | GWGCWC | 1 cut(s) | 272 |
| BsiSI | CCGG | 2 cut(s) | 208, 568 |
| BslFI | GGGAC | 1 cut(s) | 204 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 76, 568, 638, 715, 996 |
| BsmAI | GTCTC | 1 cut(s) | 27 |
| BsmFI | GGGAC | 1 cut(s) | 204 |
| BsnI | GGCC | 5 cut(s) | 189, 314, 436, 607, 778 |
| Bsp120I | GGGCCC | 1 cut(s) | 187 |
| Bsp1286I | GDGCHC | 5 cut(s) | 191, 256, 272, 523, 645 |
| Bsp1407I | TGTACA | 1 cut(s) | 873 |
| Bsp143I | GATC | 4 cut(s) | 238, 348, 556, 850 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 387 |
| Bsp19I | CCATGG | 1 cut(s) | 582 |
| BspACI | CCGC | 6 cut(s) | 75, 77, 315, 540, 604, 1142 |
| BspANI | GGCC | 5 cut(s) | 189, 314, 436, 607, 778 |
| BspCNI | CTCAG | 3 cut(s) | 255, 286, 1048 |
| BspFNI | CGCG | 2 cut(s) | 77, 604 |
| BspHI | TCATGA | 1 cut(s) | 756 |
| BspLI | GGNNCC | 4 cut(s) | 189, 206, 538, 844 |
| BspMAI | CTGCAG | 1 cut(s) | 835 |
| BspMI | ACCTGC | 1 cut(s) | 489 |
| BspPI | GGATC | 2 cut(s) | 356, 845 |
| BspT107I | GGYRCC | 2 cut(s) | 204, 536 |
| BsrDI | GCAATG | 1 cut(s) | 145 |
| BsrFI | RCCGGY | 1 cut(s) | 207 |
| BsrGI | TGTACA | 1 cut(s) | 873 |
| BsrI | ACTGG | 4 cut(s) | 113, 222, 812, 1009 |
| BssAI | RCCGGY | 1 cut(s) | 207 |
| BssECI | CCNNGG | 4 cut(s) | 75, 321, 365, 582 |
| BssMI | GATC | 4 cut(s) | 238, 348, 556, 850 |
| BssNI | GRCGYC | 4 cut(s) | 5, 205, 247, 537 |
| BssT1I | CCWWGG | 2 cut(s) | 321, 582 |
| Bst2UI | CCWGG | 1 cut(s) | 471 |
| Bst6I | CTCTTC | 2 cut(s) | 94, 755 |
| BstACI | GRCGYC | 4 cut(s) | 5, 205, 247, 537 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1076 |
| BstAUI | TGTACA | 1 cut(s) | 873 |
| BstBAI | YACGTR | 1 cut(s) | 259 |
| BstC8I | GCNNGC | 7 cut(s) | 79, 172, 209, 372, 376, 393, 544 |
| BstDEI | CTNAG | 4 cut(s) | 242, 294, 387, 1056 |
| BstDSI | CCRYGG | 2 cut(s) | 75, 582 |
| BstF5I | GGATG | 4 cut(s) | 83, 281, 830, 1136 |
| BstFNI | CGCG | 2 cut(s) | 77, 604 |
| BstH2I | RGCGCY | 3 cut(s) | 208, 294, 540 |
| BstHHI | GCGC | 4 cut(s) | 83, 207, 293, 539 |
| BstKTI | GATC | 4 cut(s) | 241, 351, 559, 853 |
| BstMAI | GTCTC | 1 cut(s) | 27 |
| BstMBI | GATC | 4 cut(s) | 238, 348, 556, 850 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 135, 392, 397, 406, 518, 543, 1076 |
| BstNI | CCWGG | 1 cut(s) | 471 |
| BstNSI | RCATGY | 2 cut(s) | 445, 546 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 899 |
| BstSCI | CCNGG | 2 cut(s) | 469, 567 |
| BstSFI | CTRYAG | 1 cut(s) | 831 |
| BstSLI | GKGCMC | 1 cut(s) | 191 |
| BstUI | CGCG | 2 cut(s) | 77, 604 |
| BstV1I | GCAGC | 8 cut(s) | 141, 144, 147, 304, 473, 709, 817, 852 |
| BstV2I | GAAGAC | 2 cut(s) | 267, 1222 |
| BsuRI | GGCC | 5 cut(s) | 189, 314, 436, 607, 778 |
| BtgI | CCRYGG | 2 cut(s) | 75, 582 |
| BtsCI | GGATG | 4 cut(s) | 83, 281, 830, 1136 |
| BveI | ACCTGC | 1 cut(s) | 489 |
| Cac8I | GCNNGC | 7 cut(s) | 79, 172, 209, 372, 376, 393, 544 |
| CaiI | CAGNNNCTG | 1 cut(s) | 293 |
| CciI | TCATGA | 1 cut(s) | 756 |
| CfoI | GCGC | 4 cut(s) | 83, 207, 293, 539 |
| Cfr10I | RCCGGY | 1 cut(s) | 207 |
| Cfr13I | GGNCC | 2 cut(s) | 187, 188 |
| Cfr42I | CCGCGG | 1 cut(s) | 78 |
| Csp6I | GTAC | 2 cut(s) | 66, 874 |
| CviAII | CATG | 7 cut(s) | 420, 442, 543, 583, 726, 757, 1227 |
| CviQI | GTAC | 2 cut(s) | 66, 874 |
| DdeI | CTNAG | 4 cut(s) | 242, 294, 387, 1056 |
| DinI | GGCGCC | 2 cut(s) | 206, 538 |
| DpnI | GATC | 4 cut(s) | 240, 350, 558, 852 |
| DpnII | GATC | 4 cut(s) | 238, 348, 556, 850 |
| EaeI | YGGCCR | 1 cut(s) | 605 |
| Eam1104I | CTCTTC | 2 cut(s) | 94, 755 |
| EarI | CTCTTC | 2 cut(s) | 94, 755 |
| Ecl136II | GAGCTC | 1 cut(s) | 270 |
| Eco130I | CCWWGG | 2 cut(s) | 321, 582 |
| Eco24I | GRGCYC | 5 cut(s) | 191, 256, 272, 523, 645 |
| Eco53kI | GAGCTC | 1 cut(s) | 270 |
| Eco72I | CACGTG | 1 cut(s) | 259 |
| EcoICRI | GAGCTC | 1 cut(s) | 270 |
| EcoRII | CCWGG | 1 cut(s) | 469 |
| EcoT14I | CCWWGG | 2 cut(s) | 321, 582 |
| EcoT38I | GRGCYC | 5 cut(s) | 191, 256, 272, 523, 645 |
| EgeI | GGCGCC | 2 cut(s) | 206, 538 |
| EheI | GGCGCC | 2 cut(s) | 206, 538 |
| ErhI | CCWWGG | 2 cut(s) | 321, 582 |
| FaeI | CATG | 7 cut(s) | 423, 445, 546, 586, 729, 760, 1230 |
| FaqI | GGGAC | 1 cut(s) | 204 |
| FatI | CATG | 7 cut(s) | 419, 441, 542, 582, 725, 756, 1226 |
| FauI | CCCGC | 2 cut(s) | 70, 1149 |
| FblI | GTMKAC | 1 cut(s) | 962 |
| FokI | GGATG | 4 cut(s) | 70, 268, 837, 1123 |
| FriOI | GRGCYC | 5 cut(s) | 191, 256, 272, 523, 645 |
| FspBI | CTAG | 2 cut(s) | 791, 1029 |
| GlaI | GCGC | 4 cut(s) | 82, 206, 292, 538 |
| GsaI | CCCAGC | 1 cut(s) | 188 |
| GsuI | CTGGAG | 2 cut(s) | 453, 903 |
| HaeII | RGCGCY | 3 cut(s) | 208, 294, 540 |
| HaeIII | GGCC | 5 cut(s) | 189, 314, 436, 607, 778 |
| HapII | CCGG | 2 cut(s) | 208, 568 |
| HhaI | GCGC | 4 cut(s) | 83, 207, 293, 539 |
| Hin1I | GRCGYC | 4 cut(s) | 5, 205, 247, 537 |
| Hin1II | CATG | 7 cut(s) | 423, 445, 546, 586, 729, 760, 1230 |
| Hin6I | GCGC | 4 cut(s) | 81, 205, 291, 537 |
| HinP1I | GCGC | 4 cut(s) | 81, 205, 291, 537 |
| HincII | GTYRAC | 2 cut(s) | 501, 768 |
| HindII | GTYRAC | 2 cut(s) | 501, 768 |
| HindIII | AAGCTT | 1 cut(s) | 172 |
| HinfI | GANTC | 4 cut(s) | 217, 474, 983, 1203 |
| HpaII | CCGG | 2 cut(s) | 208, 568 |
| HphI | GGTGA | 1 cut(s) | 736 |
| Hpy166II | GTNNAC | 4 cut(s) | 478, 501, 768, 963 |
| Hpy188I | TCNGA | 2 cut(s) | 42, 245 |
| Hpy188III | TCNNGA | 5 cut(s) | 757, 882, 892, 926, 1098 |
| Hpy8I | GTNNAC | 4 cut(s) | 478, 501, 768, 963 |
| Hpy99I | CGWCG | 2 cut(s) | 10, 252 |
| HpyAV | CCTTC | 3 cut(s) | 36, 292, 698 |
| HpyCH4IV | ACGT | 3 cut(s) | 35, 247, 258 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 135, 392, 397, 406, 518, 543, 1076 |
| HpyF3I | CTNAG | 4 cut(s) | 242, 294, 387, 1056 |
| HpySE526I | ACGT | 3 cut(s) | 35, 247, 258 |
| Hsp92I | GRCGYC | 4 cut(s) | 5, 205, 247, 537 |
| Hsp92II | CATG | 7 cut(s) | 423, 445, 546, 586, 729, 760, 1230 |
| HspAI | GCGC | 4 cut(s) | 81, 205, 291, 537 |
| KasI | GGCGCC | 2 cut(s) | 204, 536 |
| KroI | GCCGGC | 1 cut(s) | 207 |
| KroNI | GCCGGC | 1 cut(s) | 209 |
| KspI | CCGCGG | 1 cut(s) | 78 |
| Kzo9I | GATC | 4 cut(s) | 238, 348, 556, 850 |
| LmnI | GCTCC | 2 cut(s) | 148, 267 |
| Lsp1109I | GCAGC | 8 cut(s) | 141, 144, 147, 304, 473, 709, 817, 852 |
| LweI | GCATC | 5 cut(s) | 92, 290, 568, 1032, 1103 |
| MaeI | CTAG | 2 cut(s) | 791, 1029 |
| MaeII | ACGT | 3 cut(s) | 35, 247, 258 |
| MaeIII | GTNAC | 1 cut(s) | 115 |
| MalI | GATC | 4 cut(s) | 240, 350, 558, 852 |
| MboI | GATC | 4 cut(s) | 238, 348, 556, 850 |
| MboII | GAAGA | 9 cut(s) | 81, 84, 87, 90, 93, 267, 772, 947, 1227 |
| MfeI | CAATTG | 1 cut(s) | 662 |
| MhlI | GDGCHC | 5 cut(s) | 191, 256, 272, 523, 645 |
| MluCI | AATT | 6 cut(s) | 233, 662, 700, 738, 1014, 1160 |
| Mly113I | GGCGCC | 2 cut(s) | 205, 537 |
| MlyI | GAGTC | 2 cut(s) | 226, 483 |
| MmeI | TCCRAC | 1 cut(s) | 194 |
| MreI | CGCCGGCG | 1 cut(s) | 207 |
| MroNI | GCCGGC | 1 cut(s) | 207 |
| MseI | TTAA | 3 cut(s) | 231, 492, 837 |
| MslI | CAYNNNNRTG | 1 cut(s) | 494 |
| MspA1I | CMGCKG | 3 cut(s) | 77, 317, 1127 |
| MspI | CCGG | 2 cut(s) | 208, 568 |
| MspR9I | CCNGG | 2 cut(s) | 471, 569 |
| MunI | CAATTG | 1 cut(s) | 662 |
| MvaI | CCWGG | 1 cut(s) | 471 |
| MvnI | CGCG | 2 cut(s) | 77, 604 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 135, 392, 397, 406, 518, 543, 1076 |
| NaeI | GCCGGC | 1 cut(s) | 209 |
| NarI | GGCGCC | 2 cut(s) | 205, 537 |
| NciI | CCSGG | 1 cut(s) | 569 |
| NcoI | CCATGG | 1 cut(s) | 582 |
| NdeII | GATC | 4 cut(s) | 238, 348, 556, 850 |
| NgoMIV | GCCGGC | 1 cut(s) | 207 |
| NlaIII | CATG | 7 cut(s) | 423, 445, 546, 586, 729, 760, 1230 |
| NlaIV | GGNNCC | 4 cut(s) | 189, 206, 538, 844 |
| NmeAIII | GCCGAG | 2 cut(s) | 376, 390 |
| NspI | RCATGY | 2 cut(s) | 445, 546 |
| PaeI | GCATGC | 1 cut(s) | 546 |
| PagI | TCATGA | 1 cut(s) | 756 |
| PaqCI | CACCTGC | 1 cut(s) | 489 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 269, 399 |
| PdiI | GCCGGC | 1 cut(s) | 209 |
| PfeI | GAWTC | 2 cut(s) | 983, 1203 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 996 |
| PfoI | TCCNGGA | 1 cut(s) | 469 |
| PleI | GAGTC | 2 cut(s) | 225, 482 |
| PluTI | GGCGCC | 2 cut(s) | 208, 540 |
| PmaCI | CACGTG | 1 cut(s) | 259 |
| PmlI | CACGTG | 1 cut(s) | 259 |
| PpsI | GAGTC | 2 cut(s) | 225, 482 |
| Ppu21I | YACGTR | 1 cut(s) | 259 |
| PshAI | GACNNNNGTC | 1 cut(s) | 899 |
| PsiI | TTATAA | 1 cut(s) | 108 |
| Psp124BI | GAGCTC | 1 cut(s) | 272 |
| Psp1406I | AACGTT | 1 cut(s) | 35 |
| Psp6I | CCWGG | 1 cut(s) | 469 |
| PspCI | CACGTG | 1 cut(s) | 259 |
| PspFI | CCCAGC | 1 cut(s) | 184 |
| PspGI | CCWGG | 1 cut(s) | 469 |
| PspN4I | GGNNCC | 4 cut(s) | 189, 206, 538, 844 |
| PspOMI | GGGCCC | 1 cut(s) | 187 |
| PspPI | GGNCC | 2 cut(s) | 187, 188 |
| PstI | CTGCAG | 1 cut(s) | 835 |
| PstNI | CAGNNNCTG | 1 cut(s) | 293 |
| PvuII | CAGCTG | 1 cut(s) | 1127 |
| RsaI | GTAC | 2 cut(s) | 67, 875 |
| RsaNI | GTAC | 2 cut(s) | 66, 874 |
| RseI | CAYNNNNRTG | 1 cut(s) | 494 |
| SacI | GAGCTC | 1 cut(s) | 272 |
| SacII | CCGCGG | 1 cut(s) | 78 |
| SaqAI | TTAA | 3 cut(s) | 231, 492, 837 |
| Sau3AI | GATC | 4 cut(s) | 238, 348, 556, 850 |
| Sau96I | GGNCC | 2 cut(s) | 187, 188 |
| SchI | GAGTC | 2 cut(s) | 226, 483 |
| ScrFI | CCNGG | 2 cut(s) | 471, 569 |
| SduI | GDGCHC | 5 cut(s) | 191, 256, 272, 523, 645 |
| SfaNI | GCATC | 5 cut(s) | 92, 290, 568, 1032, 1103 |
| SfcI | CTRYAG | 1 cut(s) | 831 |
| SfoI | GGCGCC | 2 cut(s) | 206, 538 |
| Sfr303I | CCGCGG | 1 cut(s) | 78 |
| SgrAI | CRCCGGYG | 1 cut(s) | 207 |
| SgrBI | CCGCGG | 1 cut(s) | 78 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 494 |
| SmlI | CTYRAG | 1 cut(s) | 780 |
| SmoI | CTYRAG | 1 cut(s) | 780 |
| SpeI | ACTAGT | 1 cut(s) | 1028 |
| SphI | GCATGC | 1 cut(s) | 546 |
| Sse9I | AATT | 6 cut(s) | 233, 662, 700, 738, 1014, 1160 |
| SsiI | CCGC | 6 cut(s) | 75, 77, 315, 540, 604, 1142 |
| SspDI | GGCGCC | 2 cut(s) | 204, 536 |
| SspMI | CTAG | 2 cut(s) | 791, 1029 |
| SstI | GAGCTC | 1 cut(s) | 272 |
| StyD4I | CCNGG | 2 cut(s) | 469, 567 |
| StyI | CCWWGG | 2 cut(s) | 321, 582 |
| TaiI | ACGT | 3 cut(s) | 38, 250, 261 |
| TaqI | TCGA | 5 cut(s) | 250, 263, 351, 402, 1169 |
| TasI | AATT | 6 cut(s) | 233, 662, 700, 738, 1014, 1160 |
| TatI | WGTACW | 1 cut(s) | 873 |
| TauI | GCSGC | 3 cut(s) | 317, 542, 607 |
| TfiI | GAWTC | 2 cut(s) | 983, 1203 |
| Tru1I | TTAA | 3 cut(s) | 231, 492, 837 |
| Tru9I | TTAA | 3 cut(s) | 231, 492, 837 |
| TseI | GCWGC | 8 cut(s) | 129, 132, 135, 317, 461, 722, 830, 865 |
| TspDTI | ATGAA | 4 cut(s) | 773, 818, 1125, 1186 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 996 |
| XapI | RAATTY | 2 cut(s) | 233, 1160 |
| XceI | RCATGY | 2 cut(s) | 445, 546 |
| XmiI | GTMKAC | 1 cut(s) | 962 |
| XspI | CTAG | 2 cut(s) | 791, 1029 |
| ZraI | GACGTC | 1 cut(s) | 248 |