RLG00000034305

Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0001284
Physical Location & Seq
Reverse (-)
40296372 .. 40369929
73558 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034305

Sequence Viewer

Length: 801 bp
ATGCATGTTGGTTTGTGCAGGTCAATAACATTGGCAACAAGCCCAGGACACCTTCCTGATATTAAGATGTTGACACTACTTGGATGTTGGGCTTTTTTTTTAAGAGGCGCCGCATGTACCATAAATGATATCCTTGATCGAGATATTGACGCCATGGTGGAACGTACAAAGTTGCGGCCAATTGCGAGTGGTCTTTTGACACCTTTTCAAGGGTTGTGTTTTCTCGGATTTCAATTGCTTTTTGTTCTTGGAATTCTCCTCCAACTGAATATTTATAGCCATGTTTTGGGGGCTTTGTCTTTGTTGCTAGTTTTCTCCTATCCCCTCATGAAAAGGTTGACATACTGGCCTCAAGCATACCTAGGTTTGACCATTAATTGGGGAGCTTTGTTAGGATGGGCTGCAATTAAAGGGAGCATTGATCCAGCTATAGTACTTCCATTGTACATTTCTGGTGTATTTTGGACACTTGTGTATGATACGATATATGCACATCAGGATAAAGAAGATGATCTGAAGGTTGGTGTCAAATCTACCGCTTTGAAGTTTGGTGATTCAACAAAGGAGTGGATTACTGGGTTTGGAATCCTGTGCATCAGTGGTCTTGCCCTCAGTGGATATAATGCCGAAATTGGCTGGCCATATTATGCACTTCTGGCAGTTGCATCTGGACAATTAGCTTGGCAAATATGGACGGTTGACCTTTCATCCAGGCTTGATTGCAATAGAAAGTTTGTGTCGAACAAGTGGTTTGGTGCTATTATTTGCAGTGGAATCTTATTGGGAAGACTTTCATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00130 ko01100 ko01110 map00130 map01100 map01110
Pfam Domains
Protein Families
UbiA

Protein Analysis

267

Amino Acids

29.33

Weight (kDa)

8.43

Isoelectric Point (pI)

30.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UbiA PF01040 11 - 247 2.4e-57 UbiA prenyltransferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 9
AccB1I GGYRCC 1 cut(s) 107
AccB7I CCANNNNNTGG 2 cut(s) 286, 378
AciI CCGC 3 cut(s) 111, 175, 537
AclWI GGATC 1 cut(s) 416
AcoI YGGCCR 2 cut(s) 176, 638
AcsI RAATTY 1 cut(s) 252
AcuI CTGAAG 1 cut(s) 536
AcyI GRCGYC 2 cut(s) 108, 150
AfaI GTAC 4 cut(s) 118, 166, 435, 446
AfiI CCNNNNNNNGG 3 cut(s) 209, 286, 378
AgsI TTSAA 4 cut(s) 209, 233, 544, 558
AjnI CCWGG 2 cut(s) 43, 710
AluBI AGCT 3 cut(s) 386, 428, 680
AluI AGCT 3 cut(s) 386, 428, 680
AlwI GGATC 1 cut(s) 416
AoxI GGCC 3 cut(s) 176, 347, 638
ApeKI GCWGC 1 cut(s) 401
ApoI RAATTY 1 cut(s) 252
AseI ATTAAT 1 cut(s) 375
Asp700I GAANNNNTTC 1 cut(s) 790
AspA2I CCTAGG 1 cut(s) 361
AspLEI GCGC 1 cut(s) 110
AsuHPI GGTGA 1 cut(s) 563
AvrII CCTAGG 1 cut(s) 361
BalI TGGCCA 1 cut(s) 640
BanI GGYRCC 1 cut(s) 107
BbsI GAAGAC 1 cut(s) 793
BbvI GCAGC 1 cut(s) 388
BccI CCATC 1 cut(s) 390
BciT130I CCWGG 2 cut(s) 45, 712
BfaI CTAG 2 cut(s) 308, 362
BfmI CTRYAG 1 cut(s) 429
BfoI RGCGCY 1 cut(s) 111
BfuAI ACCTGC 1 cut(s) 9
BisI GCNGC 3 cut(s) 111, 176, 402
BlnI CCTAGG 1 cut(s) 361
BlsI GCNGC 3 cut(s) 112, 177, 403
BmcAI AGTACT 1 cut(s) 435
Bme1390I CCNGG 2 cut(s) 45, 712
BmiI GGNNCC 1 cut(s) 109
BmrFI CCNGG 2 cut(s) 45, 712
BmrI ACTGGG 1 cut(s) 585
BmsI GCATC 2 cut(s) 603, 674
BmuI ACTGGG 1 cut(s) 585
BpiI GAAGAC 1 cut(s) 793
BpuEI CTTGAG 1 cut(s) 336
BsaHI GRCGYC 2 cut(s) 108, 150
BsaJI CCNNGG 3 cut(s) 43, 153, 361
Bsc4I CCNNNNNNNGG 3 cut(s) 209, 286, 378
Bse1I ACTGG 2 cut(s) 350, 580
BseBI CCWGG 2 cut(s) 45, 712
BseDI CCNNGG 3 cut(s) 43, 153, 361
BseGI GGATG 3 cut(s) 89, 401, 707
BseLI CCNNNNNNNGG 3 cut(s) 209, 286, 378
BseMII CTCAG 1 cut(s) 625
BseNI ACTGG 2 cut(s) 350, 580
BseRI GAGGAG 1 cut(s) 248
BseXI GCAGC 1 cut(s) 388
BsgI GTGCAG 1 cut(s) 37
BshFI GGCC 3 cut(s) 178, 349, 640
BshNI GGYRCC 1 cut(s) 107
BslI CCNNNNNNNGG 3 cut(s) 209, 286, 378
BsnI GGCC 3 cut(s) 178, 349, 640
Bsp1407I TGTACA 1 cut(s) 444
Bsp143I GATC 3 cut(s) 136, 421, 511
Bsp19I CCATGG 1 cut(s) 153
BspACI CCGC 3 cut(s) 111, 175, 537
BspANI GGCC 3 cut(s) 178, 349, 640
BspCNI CTCAG 1 cut(s) 624
BspHI TCATGA 1 cut(s) 327
BspLI GGNNCC 1 cut(s) 109
BspMI ACCTGC 1 cut(s) 9
BspPI GGATC 1 cut(s) 416
BspT107I GGYRCC 1 cut(s) 107
BsrGI TGTACA 1 cut(s) 444
BsrI ACTGG 2 cut(s) 350, 580
BssECI CCNNGG 3 cut(s) 43, 153, 361
BssMI GATC 3 cut(s) 136, 421, 511
BssNI GRCGYC 2 cut(s) 108, 150
BssT1I CCWWGG 2 cut(s) 153, 361
Bst2UI CCWGG 2 cut(s) 45, 712
Bst4CI ACNGT 1 cut(s) 697
BstACI GRCGYC 2 cut(s) 108, 150
BstAUI TGTACA 1 cut(s) 444
BstC8I GCNNGC 1 cut(s) 638
BstDEI CTNAG 1 cut(s) 611
BstDSI CCRYGG 1 cut(s) 153
BstENI CCTNNNNNAGG 1 cut(s) 207
BstF5I GGATG 3 cut(s) 89, 401, 707
BstH2I RGCGCY 1 cut(s) 111
BstHHI GCGC 1 cut(s) 110
BstKTI GATC 3 cut(s) 139, 424, 514
BstMBI GATC 3 cut(s) 136, 421, 511
BstMWI GCNNNNNNNGC 1 cut(s) 656
BstNI CCWGG 2 cut(s) 45, 712
BstNSI RCATGY 2 cut(s) 8, 117
BstSCI CCNGG 2 cut(s) 43, 710
BstSFI CTRYAG 1 cut(s) 429
BstV1I GCAGC 1 cut(s) 388
BstV2I GAAGAC 1 cut(s) 793
BsuRI GGCC 3 cut(s) 178, 349, 640
BtgI CCRYGG 1 cut(s) 153
BtsCI GGATG 3 cut(s) 89, 401, 707
BtsI GCAGTG 1 cut(s) 775
BtsIMutI CAGTG 3 cut(s) 604, 619, 775
BveI ACCTGC 1 cut(s) 9
Cac8I GCNNGC 1 cut(s) 638
CciI TCATGA 1 cut(s) 327
CfoI GCGC 1 cut(s) 110
CseI GACGC 1 cut(s) 158
Csp6I GTAC 4 cut(s) 117, 165, 434, 445
CviAII CATG 5 cut(s) 5, 114, 154, 281, 328
CviQI GTAC 4 cut(s) 117, 165, 434, 445
DdeI CTNAG 1 cut(s) 611
DinI GGCGCC 1 cut(s) 109
DpnI GATC 3 cut(s) 138, 423, 513
DpnII GATC 3 cut(s) 136, 421, 511
EaeI YGGCCR 2 cut(s) 176, 638
Eco130I CCWWGG 2 cut(s) 153, 361
Eco32I GATATC 1 cut(s) 130
Eco57I CTGAAG 1 cut(s) 536
EcoNI CCTNNNNNAGG 1 cut(s) 207
EcoRI GAATTC 1 cut(s) 252
EcoRII CCWGG 2 cut(s) 43, 710
EcoRV GATATC 1 cut(s) 130
EcoT14I CCWWGG 2 cut(s) 153, 361
EcoT22I ATGCAT 1 cut(s) 6
EgeI GGCGCC 1 cut(s) 109
EheI GGCGCC 1 cut(s) 109
ErhI CCWWGG 2 cut(s) 153, 361
FaeI CATG 5 cut(s) 8, 117, 157, 284, 331
FatI CATG 5 cut(s) 4, 113, 153, 280, 327
Fnu4HI GCNGC 3 cut(s) 111, 176, 402
FokI GGATG 3 cut(s) 96, 408, 694
Fsp4HI GCNGC 3 cut(s) 111, 176, 402
FspBI CTAG 2 cut(s) 308, 362
GlaI GCGC 1 cut(s) 109
GluI GCNGC 3 cut(s) 111, 176, 402
HaeII RGCGCY 1 cut(s) 111
HaeIII GGCC 3 cut(s) 178, 349, 640
HgaI GACGC 1 cut(s) 158
HhaI GCGC 1 cut(s) 110
Hin1I GRCGYC 2 cut(s) 108, 150
Hin1II CATG 5 cut(s) 8, 117, 157, 284, 331
Hin6I GCGC 1 cut(s) 108
HinP1I GCGC 1 cut(s) 108
HincII GTYRAC 3 cut(s) 72, 339, 700
HindII GTYRAC 3 cut(s) 72, 339, 700
HinfI GANTC 3 cut(s) 554, 585, 774
HphI GGTGA 1 cut(s) 563
Hpy166II GTNNAC 3 cut(s) 72, 339, 700
Hpy188I TCNGA 2 cut(s) 227, 516
Hpy188III TCNNGA 5 cut(s) 56, 140, 328, 497, 669
Hpy8I GTNNAC 3 cut(s) 72, 339, 700
HpyAV CCTTC 2 cut(s) 62, 511
HpyCH4III ACNGT 1 cut(s) 697
HpyCH4IV ACGT 1 cut(s) 163
HpyCH4V TGCA 9 cut(s) 4, 18, 404, 491, 594, 650, 665, 723, 768
HpyF10VI GCNNNNNNNGC 1 cut(s) 656
HpyF3I CTNAG 1 cut(s) 611
HpySE526I ACGT 1 cut(s) 163
Hsp92I GRCGYC 2 cut(s) 108, 150
Hsp92II CATG 5 cut(s) 8, 117, 157, 284, 331
HspAI GCGC 1 cut(s) 108
KasI GGCGCC 1 cut(s) 107
Kzo9I GATC 3 cut(s) 136, 421, 511
LmnI GCTCC 2 cut(s) 383, 414
Lsp1109I GCAGC 1 cut(s) 388
LweI GCATC 2 cut(s) 603, 674
MaeI CTAG 2 cut(s) 308, 362
MaeII ACGT 1 cut(s) 163
MalI GATC 3 cut(s) 138, 423, 513
MboI GATC 3 cut(s) 136, 421, 511
MboII GAAGA 2 cut(s) 518, 798
MfeI CAATTG 2 cut(s) 180, 233
MlsI TGGCCA 1 cut(s) 640
MluCI AATT 7 cut(s) 180, 233, 252, 376, 405, 630, 674
MluNI TGGCCA 1 cut(s) 640
Mly113I GGCGCC 1 cut(s) 108
MmeI TCCRAC 1 cut(s) 286
MnlI CCTC 5 cut(s) 98, 269, 335, 360, 620
Mox20I TGGCCA 1 cut(s) 640
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 790
MscI TGGCCA 1 cut(s) 640
MseI TTAA 4 cut(s) 63, 101, 375, 408
Msp20I TGGCCA 1 cut(s) 640
MspR9I CCNGG 2 cut(s) 45, 712
MunI CAATTG 2 cut(s) 180, 233
MvaI CCWGG 2 cut(s) 45, 712
MwoI GCNNNNNNNGC 1 cut(s) 656
NarI GGCGCC 1 cut(s) 108
NcoI CCATGG 1 cut(s) 153
NdeII GATC 3 cut(s) 136, 421, 511
NlaIII CATG 5 cut(s) 8, 117, 157, 284, 331
NlaIV GGNNCC 1 cut(s) 109
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 2 cut(s) 8, 117
PagI TCATGA 1 cut(s) 327
PdmI GAANNNNTTC 1 cut(s) 790
PfeI GAWTC 3 cut(s) 554, 585, 774
PflMI CCANNNNNTGG 2 cut(s) 286, 378
PkrI GCNGC 3 cut(s) 112, 177, 403
PluTI GGCGCC 1 cut(s) 111
PshBI ATTAAT 1 cut(s) 375
Psp6I CCWGG 2 cut(s) 43, 710
PspGI CCWGG 2 cut(s) 43, 710
PspN4I GGNNCC 1 cut(s) 109
RsaI GTAC 4 cut(s) 118, 166, 435, 446
RsaNI GTAC 4 cut(s) 117, 165, 434, 445
SaqAI TTAA 4 cut(s) 63, 101, 375, 408
SatI GCNGC 3 cut(s) 111, 176, 402
Sau3AI GATC 3 cut(s) 136, 421, 511
ScaI AGTACT 1 cut(s) 435
ScrFI CCNGG 2 cut(s) 45, 712
SfaNI GCATC 2 cut(s) 603, 674
SfcI CTRYAG 1 cut(s) 429
SfoI GGCGCC 1 cut(s) 109
SmlI CTYRAG 1 cut(s) 351
SmoI CTYRAG 1 cut(s) 351
Sse9I AATT 7 cut(s) 180, 233, 252, 376, 405, 630, 674
SsiI CCGC 3 cut(s) 111, 175, 537
SspDI GGCGCC 1 cut(s) 107
SspI AATATT 1 cut(s) 271
SspMI CTAG 2 cut(s) 308, 362
StyD4I CCNGG 2 cut(s) 43, 710
StyI CCWWGG 2 cut(s) 153, 361
TaaI ACNGT 1 cut(s) 697
TaiI ACGT 1 cut(s) 166
TaqI TCGA 2 cut(s) 139, 740
TasI AATT 7 cut(s) 180, 233, 252, 376, 405, 630, 674
TatI WGTACW 2 cut(s) 433, 444
TauI GCSGC 2 cut(s) 113, 178
TfiI GAWTC 3 cut(s) 554, 585, 774
Tru1I TTAA 4 cut(s) 63, 101, 375, 408
Tru9I TTAA 4 cut(s) 63, 101, 375, 408
TscAI CASTG 3 cut(s) 604, 619, 775
TseI GCWGC 1 cut(s) 401
TspDTI ATGAA 3 cut(s) 344, 696, 783
TspRI CASTG 3 cut(s) 604, 619, 775
Van91I CCANNNNNTGG 2 cut(s) 286, 378
VspI ATTAAT 1 cut(s) 375
XagI CCTNNNNNAGG 1 cut(s) 207
XapI RAATTY 1 cut(s) 252
XceI RCATGY 2 cut(s) 8, 117
XmaJI CCTAGG 1 cut(s) 361
XmnI GAANNNNTTC 1 cut(s) 790
XspI CTAG 2 cut(s) 308, 362
ZrmI AGTACT 1 cut(s) 435
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.