Prupe.4G276200_v2.0.a1

Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0001284
Physical Location & Seq
Reverse (-)
23077156 .. 23080474
3319 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G276200.5

Sequence Viewer

Length: 1218 bp
ATGGCGTCGTTTTGGCTCGTCTCTCGCGCTTCGCGTAGGTTTCTGGAAGTGAAACCTTCACTTTCTCTCTCCCGCACCCTATTCGCAGTTTCTACTTACCAACCAACCACCACCACCACCACCACCTCGAAAAATTCTAACCCTAACGCTTATCCCAACGGAACCCAGTTGGGCCCATTCACTCAGAGGCACCGTTGGATTCCCAGTTGCGTCGAATTTGATCTGAGACTCGTAGCCCACATCTCCAGCTCGTCTTCATCTACAGGCGCCAAGAAGGACGGAAATCAGGGCAGCAATGACGTCAAGGTTGAAGTTGAGACTTCTTGGATCGACTTGTACTTGCCAAGACAAGCTCGCCCTTATGCGAAGCTCGCTCGCCTCGACAGGCCCATTGGCACTTGGTTGCTCGCTTGGCCTTGTATGTGTTGTTGGTGCAGGTCAATAACATTGGCTGCAAGCCCAGGGCACCTTCCTGATATTAAGATGATGACACTATTTGGATGCGGGGCTCTGCTCTTAAGGGGCGCTGGATGCACCATAAACGATCTCCTTGACCGGGATATTGATACCATGGTGGAACGTACAAAATTGCGGCCAGTTGCAAGTGGTCTTTTGACACCTTTTCAGGGGATTTGTTTTCTTGGATTTCAATTGCTTTTGGGTTTTGGAATTCTCCTTCAACTGAATAATTATAGCCGCGTTTTTGGGGCTTCATCATTGTTGCTAGTTTTCTCCTATCCTCTCATGAAGAGGTTGACATTCTGGCCTCAAGCCTTTCTAGGTTTGACCTTTAATTGGGGAGCTTTATTAGGATGGGCTGCAGTTAAAGGAAGCATTGATCCAGCTATAGTGCTCCCATTGTACCTTTCTGGAGTTTGCTGGACACTTGTGTATGATACAATATACGCACATCAGGATAAGGAAGATGATCTGAAAGTAGGTGTTAAGTCTACTGCATTGAGATTTGGTGATTCAACTAAGGAGTGGATTACTGGGTTTGGAATTATGTGCAGCGGCAGTCTTGCCCTCAGTGGATATAATGCTGAAATCGGCTGGCCATACTATGCATTTTTGGGGGCTGCATCTGGACAATTAGCTTGGCAGATATGGACTGCTGACCTTTCATCCCGGGTTGATTGCAACAGAAAATTTGTGTCGAACAAGTGGTTTGGTGCTATTATTTTCAGTGGAATCCTGTTTGGAAAACTTTCATCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00130 ko01100 ko01110 map00130 map01100 map01110
Pfam Domains
Protein Families
UbiA

Protein Analysis

406

Amino Acids

44.76

Weight (kDa)

9.22

Isoelectric Point (pI)

33.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 303
Acc36I ACCTGC 1 cut(s) 426
AccB1I GGYRCC 3 cut(s) 189, 266, 465
AccI GTMKAC 1 cut(s) 950
AccII CGCG 3 cut(s) 27, 34, 699
AciI CCGC 5 cut(s) 73, 504, 592, 697, 1014
AclWI GGATC 2 cut(s) 335, 833
AcoI YGGCCR 2 cut(s) 593, 1055
AcsI RAATTY 4 cut(s) 133, 215, 669, 1148
AcyI GRCGYC 3 cut(s) 5, 267, 300
AfaI GTAC 3 cut(s) 338, 583, 863
AfiI CCNNNNNNNGG 3 cut(s) 556, 626, 795
AflII CTTAAG 1 cut(s) 517
AgsI TTSAA 4 cut(s) 311, 650, 680, 975
AjnI CCWGG 1 cut(s) 460
AluBI AGCT 6 cut(s) 249, 353, 370, 803, 845, 1097
AluI AGCT 6 cut(s) 249, 353, 370, 803, 845, 1097
Alw21I GWGCWC 1 cut(s) 855
Alw26I GTCTC 3 cut(s) 25, 220, 311
AlwI GGATC 2 cut(s) 335, 833
Ama87I CYCGRG 1 cut(s) 1128
AoxI GGCC 6 cut(s) 172, 386, 413, 593, 764, 1055
ApaI GGGCCC 1 cut(s) 176
ApeKI GCWGC 5 cut(s) 291, 452, 818, 1011, 1079
ApoI RAATTY 4 cut(s) 133, 215, 669, 1148
Asp700I GAANNNNTTC 1 cut(s) 1207
AspLEI GCGC 3 cut(s) 29, 269, 527
AspS9I GGNCC 3 cut(s) 172, 173, 387
AsuC2I CCSGG 3 cut(s) 557, 1129, 1130
AsuHPI GGTGA 1 cut(s) 980
AvaI CYCGRG 1 cut(s) 1128
BaeGI GKGCMC 2 cut(s) 176, 468
BaeI ACNNNNGTAYC 2 cut(s) 558, 591
BalI TGGCCA 1 cut(s) 1057
BanI GGYRCC 3 cut(s) 189, 266, 465
BanII GRGCYC 2 cut(s) 176, 511
BbsI GAAGAC 1 cut(s) 246
Bbv12I GWGCWC 1 cut(s) 855
BbvI GCAGC 5 cut(s) 303, 439, 805, 1023, 1066
BccI CCATC 1 cut(s) 807
BcgI CGANNNNNNTGC 2 cut(s) 64, 98
BciT130I CCWGG 1 cut(s) 462
BcnI CCSGG 3 cut(s) 557, 1129, 1130
BcoDI GTCTC 3 cut(s) 25, 220, 311
BfaI CTAG 2 cut(s) 725, 779
BfmI CTRYAG 3 cut(s) 261, 819, 846
BfoI RGCGCY 2 cut(s) 270, 528
BfrI CTTAAG 1 cut(s) 517
BfuAI ACCTGC 1 cut(s) 426
BisI GCNGC 8 cut(s) 292, 453, 593, 697, 819, 1012, 1015, 1080
BlsI GCNGC 8 cut(s) 293, 454, 594, 698, 820, 1013, 1016, 1081
Bme1390I CCNGG 4 cut(s) 462, 557, 1129, 1130
BmeT110I CYCGRG 1 cut(s) 1128
BmgT120I GGNCC 3 cut(s) 172, 173, 387
BmiI GGNNCC 5 cut(s) 163, 174, 191, 268, 467
BmrFI CCNGG 4 cut(s) 462, 557, 1129, 1130
BmrI ACTGGG 3 cut(s) 160, 198, 1002
BmsI GCATC 3 cut(s) 491, 521, 1091
BmuI ACTGGG 3 cut(s) 160, 198, 1002
BpiI GAAGAC 1 cut(s) 246
BpmI CTGGAG 2 cut(s) 229, 891
BpuEI CTTGAG 1 cut(s) 753
BpuMI CCSGG 3 cut(s) 557, 1129, 1130
BsaHI GRCGYC 3 cut(s) 5, 267, 300
BsaJI CCNNGG 4 cut(s) 460, 461, 570, 1128
Bsc4I CCNNNNNNNGG 3 cut(s) 556, 626, 795
Bse1I ACTGG 4 cut(s) 166, 204, 596, 997
Bse3DI GCAATG 1 cut(s) 301
BseBI CCWGG 1 cut(s) 462
BseDI CCNNGG 4 cut(s) 460, 461, 570, 1128
BseGI GGATG 4 cut(s) 506, 536, 818, 1124
BseLI CCNNNNNNNGG 3 cut(s) 556, 626, 795
BseMI GCAATG 1 cut(s) 301
BseMII CTCAG 3 cut(s) 197, 215, 1042
BseNI ACTGG 4 cut(s) 166, 204, 596, 997
BseSI GKGCMC 2 cut(s) 176, 468
BseXI GCAGC 5 cut(s) 303, 439, 805, 1023, 1066
BsgI GTGCAG 2 cut(s) 454, 1030
Bsh1236I CGCG 3 cut(s) 27, 34, 699
BshFI GGCC 6 cut(s) 174, 388, 415, 595, 766, 1057
BshNI GGYRCC 3 cut(s) 189, 266, 465
BsiHKAI GWGCWC 1 cut(s) 855
BsiHKCI CYCGRG 1 cut(s) 1128
BsiSI CCGG 2 cut(s) 556, 1129
BslI CCNNNNNNNGG 3 cut(s) 556, 626, 795
BsmAI GTCTC 3 cut(s) 25, 220, 311
BsmBI CGTCTC 1 cut(s) 25
BsnI GGCC 6 cut(s) 174, 388, 415, 595, 766, 1057
BsoBI CYCGRG 1 cut(s) 1128
Bsp120I GGGCCC 1 cut(s) 172
Bsp1286I GDGCHC 4 cut(s) 176, 468, 511, 855
Bsp143I GATC 5 cut(s) 220, 327, 544, 838, 928
Bsp19I CCATGG 1 cut(s) 570
BspACI CCGC 5 cut(s) 73, 504, 592, 697, 1014
BspANI GGCC 6 cut(s) 174, 388, 415, 595, 766, 1057
BspCNI CTCAG 3 cut(s) 196, 216, 1041
BspFNI CGCG 3 cut(s) 27, 34, 699
BspHI TCATGA 1 cut(s) 744
BspLI GGNNCC 5 cut(s) 163, 174, 191, 268, 467
BspMAI CTGCAG 1 cut(s) 823
BspMI ACCTGC 1 cut(s) 426
BspPI GGATC 2 cut(s) 335, 833
BspT107I GGYRCC 3 cut(s) 189, 266, 465
BspTI CTTAAG 1 cut(s) 517
BsrDI GCAATG 1 cut(s) 301
BsrI ACTGG 4 cut(s) 166, 204, 596, 997
BssECI CCNNGG 4 cut(s) 460, 461, 570, 1128
BssMI GATC 5 cut(s) 220, 327, 544, 838, 928
BssNI GRCGYC 3 cut(s) 5, 267, 300
BssT1I CCWWGG 1 cut(s) 570
Bst2UI CCWGG 1 cut(s) 462
Bst4CI ACNGT 1 cut(s) 194
Bst6I CTCTTC 1 cut(s) 743
BstACI GRCGYC 3 cut(s) 5, 267, 300
BstAFI CTTAAG 1 cut(s) 517
BstC8I GCNNGC 6 cut(s) 355, 372, 376, 408, 457, 1055
BstDEI CTNAG 4 cut(s) 183, 224, 978, 1028
BstDSI CCRYGG 1 cut(s) 570
BstF5I GGATG 4 cut(s) 506, 536, 818, 1124
BstFNI CGCG 3 cut(s) 27, 34, 699
BstH2I RGCGCY 2 cut(s) 270, 528
BstHHI GCGC 3 cut(s) 29, 269, 527
BstKTI GATC 5 cut(s) 223, 330, 547, 841, 931
BstMAI GTCTC 3 cut(s) 25, 220, 311
BstMBI GATC 5 cut(s) 220, 327, 544, 838, 928
BstMWI GCNNNNNNNGC 3 cut(s) 371, 412, 531
BstNI CCWGG 1 cut(s) 462
BstSCI CCNGG 4 cut(s) 460, 555, 1127, 1128
BstSFI CTRYAG 3 cut(s) 261, 819, 846
BstSLI GKGCMC 2 cut(s) 176, 468
BstUI CGCG 3 cut(s) 27, 34, 699
BstV1I GCAGC 5 cut(s) 303, 439, 805, 1023, 1066
BstV2I GAAGAC 1 cut(s) 246
BsuRI GGCC 6 cut(s) 174, 388, 415, 595, 766, 1057
BtgI CCRYGG 1 cut(s) 570
BtsCI GGATG 4 cut(s) 506, 536, 818, 1124
BtsIMutI CAGTG 2 cut(s) 1036, 1192
BveI ACCTGC 1 cut(s) 426
Cac8I GCNNGC 6 cut(s) 355, 372, 376, 408, 457, 1055
CciI TCATGA 1 cut(s) 744
CfoI GCGC 3 cut(s) 29, 269, 527
Cfr13I GGNCC 3 cut(s) 172, 173, 387
Cfr9I CCCGGG 1 cut(s) 1128
CseI GACGC 1 cut(s) 199
Csp6I GTAC 3 cut(s) 337, 582, 862
CviAII CATG 2 cut(s) 571, 745
CviQI GTAC 3 cut(s) 337, 582, 862
DdeI CTNAG 4 cut(s) 183, 224, 978, 1028
DinI GGCGCC 1 cut(s) 268
DpnI GATC 5 cut(s) 222, 329, 546, 840, 930
DpnII GATC 5 cut(s) 220, 327, 544, 838, 928
EaeI YGGCCR 2 cut(s) 593, 1055
Eam1104I CTCTTC 1 cut(s) 743
EarI CTCTTC 1 cut(s) 743
Eco130I CCWWGG 1 cut(s) 570
Eco24I GRGCYC 2 cut(s) 176, 511
Eco88I CYCGRG 1 cut(s) 1128
EcoRI GAATTC 1 cut(s) 669
EcoRII CCWGG 1 cut(s) 460
EcoT14I CCWWGG 1 cut(s) 570
EcoT22I ATGCAT 1 cut(s) 1069
EcoT38I GRGCYC 2 cut(s) 176, 511
EgeI GGCGCC 1 cut(s) 268
EheI GGCGCC 1 cut(s) 268
ErhI CCWWGG 1 cut(s) 570
Esp3I CGTCTC 1 cut(s) 25
FaeI CATG 2 cut(s) 574, 748
FatI CATG 2 cut(s) 570, 744
FauI CCCGC 2 cut(s) 80, 497
FblI GTMKAC 1 cut(s) 950
Fnu4HI GCNGC 8 cut(s) 292, 453, 593, 697, 819, 1012, 1015, 1080
FokI GGATG 4 cut(s) 513, 543, 825, 1111
FriOI GRGCYC 2 cut(s) 176, 511
Fsp4HI GCNGC 8 cut(s) 292, 453, 593, 697, 819, 1012, 1015, 1080
FspBI CTAG 2 cut(s) 725, 779
GlaI GCGC 3 cut(s) 28, 268, 526
GluI GCNGC 8 cut(s) 292, 453, 593, 697, 819, 1012, 1015, 1080
GsuI CTGGAG 2 cut(s) 229, 891
HaeII RGCGCY 2 cut(s) 270, 528
HaeIII GGCC 6 cut(s) 174, 388, 415, 595, 766, 1057
HapII CCGG 2 cut(s) 556, 1129
HgaI GACGC 1 cut(s) 199
HhaI GCGC 3 cut(s) 29, 269, 527
Hin1I GRCGYC 3 cut(s) 5, 267, 300
Hin1II CATG 2 cut(s) 574, 748
Hin6I GCGC 3 cut(s) 27, 267, 525
HinP1I GCGC 3 cut(s) 27, 267, 525
HincII GTYRAC 1 cut(s) 756
HindII GTYRAC 1 cut(s) 756
HinfI GANTC 4 cut(s) 199, 228, 971, 1191
HpaII CCGG 2 cut(s) 556, 1129
HphI GGTGA 1 cut(s) 980
Hpy166II GTNNAC 2 cut(s) 756, 951
Hpy188I TCNGA 3 cut(s) 186, 225, 933
Hpy188III TCNNGA 6 cut(s) 44, 473, 745, 870, 914, 1086
Hpy8I GTNNAC 2 cut(s) 756, 951
Hpy99I CGWCG 2 cut(s) 10, 215
HpyAV CCTTC 4 cut(s) 66, 268, 479, 686
HpyCH4III ACNGT 1 cut(s) 194
HpyCH4IV ACGT 2 cut(s) 300, 580
HpyF10VI GCNNNNNNNGC 3 cut(s) 371, 412, 531
HpyF3I CTNAG 4 cut(s) 183, 224, 978, 1028
HpySE526I ACGT 2 cut(s) 300, 580
Hsp92I GRCGYC 3 cut(s) 5, 267, 300
Hsp92II CATG 2 cut(s) 574, 748
HspAI GCGC 3 cut(s) 27, 267, 525
KasI GGCGCC 1 cut(s) 266
Kzo9I GATC 5 cut(s) 220, 327, 544, 838, 928
LmnI GCTCC 2 cut(s) 800, 858
Lsp1109I GCAGC 5 cut(s) 303, 439, 805, 1023, 1066
LweI GCATC 3 cut(s) 491, 521, 1091
MaeI CTAG 2 cut(s) 725, 779
MaeII ACGT 2 cut(s) 300, 580
MalI GATC 5 cut(s) 222, 329, 546, 840, 930
MboI GATC 5 cut(s) 220, 327, 544, 838, 928
MboII GAAGA 3 cut(s) 246, 760, 935
MfeI CAATTG 1 cut(s) 650
MhlI GDGCHC 4 cut(s) 176, 468, 511, 855
MlsI TGGCCA 1 cut(s) 1057
MluNI TGGCCA 1 cut(s) 1057
Mly113I GGCGCC 1 cut(s) 267
MlyI GAGTC 1 cut(s) 222
MmeI TCCRAC 1 cut(s) 176
MnlI CCTC 7 cut(s) 136, 180, 389, 744, 750, 777, 1037
Mox20I TGGCCA 1 cut(s) 1057
Mph1103I ATGCAT 1 cut(s) 1069
MroXI GAANNNNTTC 1 cut(s) 1207
MscI TGGCCA 1 cut(s) 1057
MseI TTAA 5 cut(s) 480, 518, 792, 825, 945
Msp20I TGGCCA 1 cut(s) 1057
MspA1I CMGCKG 1 cut(s) 1014
MspCI CTTAAG 1 cut(s) 517
MspI CCGG 2 cut(s) 556, 1129
MspR9I CCNGG 4 cut(s) 462, 557, 1129, 1130
MunI CAATTG 1 cut(s) 650
MvaI CCWGG 1 cut(s) 462
MvnI CGCG 3 cut(s) 27, 34, 699
MwoI GCNNNNNNNGC 3 cut(s) 371, 412, 531
NarI GGCGCC 1 cut(s) 267
NciI CCSGG 3 cut(s) 557, 1129, 1130
NcoI CCATGG 1 cut(s) 570
NdeII GATC 5 cut(s) 220, 327, 544, 838, 928
NlaIII CATG 2 cut(s) 574, 748
NlaIV GGNNCC 5 cut(s) 163, 174, 191, 268, 467
NsiI ATGCAT 1 cut(s) 1069
PagI TCATGA 1 cut(s) 744
PasI CCCWGGG 1 cut(s) 461
PcsI WCGNNNNNNNCGW 2 cut(s) 31, 378
PdmI GAANNNNTTC 1 cut(s) 1207
PfeI GAWTC 3 cut(s) 199, 971, 1191
PkrI GCNGC 8 cut(s) 293, 454, 594, 698, 820, 1013, 1016, 1081
PleI GAGTC 1 cut(s) 222
PluTI GGCGCC 1 cut(s) 270
PpsI GAGTC 1 cut(s) 222
Psp6I CCWGG 1 cut(s) 460
PspGI CCWGG 1 cut(s) 460
PspN4I GGNNCC 5 cut(s) 163, 174, 191, 268, 467
PspOMI GGGCCC 1 cut(s) 172
PspPI GGNCC 3 cut(s) 172, 173, 387
PstI CTGCAG 1 cut(s) 823
RsaI GTAC 3 cut(s) 338, 583, 863
RsaNI GTAC 3 cut(s) 337, 582, 862
SaqAI TTAA 5 cut(s) 480, 518, 792, 825, 945
SatI GCNGC 8 cut(s) 292, 453, 593, 697, 819, 1012, 1015, 1080
Sau3AI GATC 5 cut(s) 220, 327, 544, 838, 928
Sau96I GGNCC 3 cut(s) 172, 173, 387
SchI GAGTC 1 cut(s) 222
ScrFI CCNGG 4 cut(s) 462, 557, 1129, 1130
SduI GDGCHC 4 cut(s) 176, 468, 511, 855
SfaNI GCATC 3 cut(s) 491, 521, 1091
SfcI CTRYAG 3 cut(s) 261, 819, 846
SfoI GGCGCC 1 cut(s) 268
SmaI CCCGGG 1 cut(s) 1130
SmlI CTYRAG 2 cut(s) 517, 768
SmoI CTYRAG 2 cut(s) 517, 768
SsiI CCGC 5 cut(s) 73, 504, 592, 697, 1014
SspDI GGCGCC 1 cut(s) 266
SspMI CTAG 2 cut(s) 725, 779
StyD4I CCNGG 4 cut(s) 460, 555, 1127, 1128
StyI CCWWGG 1 cut(s) 570
TaaI ACNGT 1 cut(s) 194
TaiI ACGT 2 cut(s) 303, 583
TaqI TCGA 5 cut(s) 128, 213, 330, 381, 1157
TatI WGTACW 1 cut(s) 336
TauI GCSGC 3 cut(s) 595, 699, 1017
TfiI GAWTC 3 cut(s) 199, 971, 1191
Tru1I TTAA 5 cut(s) 480, 518, 792, 825, 945
Tru9I TTAA 5 cut(s) 480, 518, 792, 825, 945
TscAI CASTG 2 cut(s) 1036, 1192
TseI GCWGC 5 cut(s) 291, 452, 818, 1011, 1079
TspDTI ATGAA 5 cut(s) 246, 702, 761, 1113, 1200
TspGWI ACGGA 2 cut(s) 174, 294
TspMI CCCGGG 1 cut(s) 1128
TspRI CASTG 2 cut(s) 1036, 1192
Vha464I CTTAAG 1 cut(s) 517
XapI RAATTY 4 cut(s) 133, 215, 669, 1148
XmaI CCCGGG 1 cut(s) 1128
XmiI GTMKAC 1 cut(s) 950
XmnI GAANNNNTTC 1 cut(s) 1207
XspI CTAG 2 cut(s) 725, 779
ZraI GACGTC 1 cut(s) 301
Zsp2I ATGCAT 1 cut(s) 1069
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.