pycom11g09450

Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0001284
Physical Location & Seq
Forward (+)
7664212 .. 7668012
3801 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g09450.8

Sequence Viewer

Length: 1215 bp
ATGGAGTCCTTTTTGGTGGTGTGTCGCACTTCCGCTTCAAGTAGGTTTCTGAAACATTCATATCCTCTCTCTCACACCCTATTCGCACCATCTTCTTATTACCCAACCTCCACCGCCACCATCACTGCCACCAGCAATCCAAACCCTTACCGCTATCCCAACGCAAGACGGTTAGGCTCGTTCTGTCAAAGGGACCGTGGGGATACTTGCAGTCGCGTTGGCTTTGATCACAGACTCGGATCGCACATGTCGTGCTCGTCTTCACCTTCTACTGCCGCAAAGAGAGGTGCAAATCAAACCATCAGCAATGATAACGACAAGGTTGAGGGTACTTGGATCGACTTGTACCTGCCAATGCGAGCTCAGCCTTATGCTAAGCTCGCTCGCCTCGACAAACCGATCGGCACCTGGTTGTATGCGTGGCCTTTTTGGTGGTCAACAGCATTGGCAGCAAATCCAGGGCAGCTTCCCGATATTAAGATTTTGACACTACTTGGATTTGGAGCTCTGTTTATTAGGGGCGCCGGATGCACCATAAACGATCTCGTTGACCGGGATATTGATATCAAGGTGGAACGTACAAAGTCGCGGCCTCTTGCAAGTGGTGTTCTGACGCCTTTTCAGGGGATTTGTTTTCTTGGATTTCAATTGCTTTTGGGTCTTGGAATTTACCTTCAATTGAATAATTATAGCTGCGTTTTGTGCGTTTCATCTTGGTTCCTAATTTTCACCTATCCTCTCATGAAGAGATTGACATACTGGCCTCAAGCCTATCTAGGTTTGATGATAAATTGGGGGGCCTTAATAGGATGGGCAGCAGTAAAAGGAAGCATTGATCCAGCTATAGTGCTCCCATTGTACTTTTCTGGAGTATGCTGGACACTGGTCTATGATACCATATATGCACATCAGGACAAGGAAGATGATCTGAAAGTAGGTGTTAAGTCTACGGCATTGAAATTCGGCGACTCAACCAAAAAATGGATTACTGGGTTTGGAATTATGTGCATGAGCAGTCTTGCCCTCAGTGGATACAATGCTGAAATCGGGTGGCCGTACTATACATTTTTGGGGGTTGCATTTGGACAATTAGCTTGGCAAATATCAACAGTTGATCTTTCATCCCCTGCTGATTGCAGTAGAAAATTTGTGTCGAACAAGTGGTTTGGCGCTATTTTGTTCATCGCAATCCTATTTGGACGACTTTCATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00130 ko01100 ko01110 map00130 map01100 map01110
Pfam Domains
Protein Families
UbiA

Protein Analysis

405

Amino Acids

44.91

Weight (kDa)

9.15

Isoelectric Point (pI)

29.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 357
AccB1I GGYRCC 2 cut(s) 404, 521
AccB7I CCANNNNNTGG 1 cut(s) 981
AccI GTMKAC 1 cut(s) 947
AccII CGCG 2 cut(s) 216, 589
AciI CCGC 5 cut(s) 33, 114, 151, 276, 589
AclWI GGATC 3 cut(s) 247, 344, 830
AcoI YGGCCR 1 cut(s) 1052
AcsI RAATTY 3 cut(s) 666, 959, 1145
AcyI GRCGYC 2 cut(s) 522, 614
AfaI GTAC 5 cut(s) 331, 347, 580, 860, 1058
AfiI CCNNNNNNNGG 2 cut(s) 623, 981
AflIII ACRYGT 1 cut(s) 246
AgsI TTSAA 5 cut(s) 39, 647, 677, 682, 958
AjnI CCWGG 2 cut(s) 407, 457
AluBI AGCT 7 cut(s) 362, 379, 466, 506, 693, 842, 1094
AluI AGCT 7 cut(s) 362, 379, 466, 506, 693, 842, 1094
Alw21I GWGCWC 4 cut(s) 257, 364, 508, 852
AlwI GGATC 3 cut(s) 247, 344, 830
AoxI GGCC 5 cut(s) 422, 590, 761, 798, 1052
ApeKI GCWGC 4 cut(s) 449, 463, 693, 815
ApoI RAATTY 3 cut(s) 666, 959, 1145
AspLEI GCGC 2 cut(s) 524, 1172
AspS9I GGNCC 2 cut(s) 193, 798
AsuC2I CCSGG 1 cut(s) 554
AsuHPI GGTGA 2 cut(s) 255, 721
AvaII GGWCC 1 cut(s) 193
BanI GGYRCC 2 cut(s) 404, 521
BanII GRGCYC 2 cut(s) 364, 508
BbsI GAAGAC 1 cut(s) 252
Bbv12I GWGCWC 4 cut(s) 257, 364, 508, 852
BbvI GCAGC 4 cut(s) 461, 475, 680, 827
BccI CCATC 4 cut(s) 97, 128, 308, 804
BceAI ACGGC 2 cut(s) 966, 1039
BciT130I CCWGG 2 cut(s) 409, 459
BciVI GTATCC 2 cut(s) 196, 1025
BclI TGATCA 1 cut(s) 226
BcnI CCSGG 1 cut(s) 554
BfaI CTAG 1 cut(s) 776
BfmI CTRYAG 1 cut(s) 843
BfoI RGCGCY 2 cut(s) 525, 1173
BfuAI ACCTGC 1 cut(s) 357
BfuI GTATCC 2 cut(s) 196, 1025
BisI GCNGC 6 cut(s) 276, 450, 464, 590, 694, 816
BlpI GCTNAGC 2 cut(s) 363, 375
BlsI GCNGC 6 cut(s) 277, 451, 465, 591, 695, 817
Bme1390I CCNGG 3 cut(s) 409, 459, 554
Bme18I GGWCC 1 cut(s) 193
BmgT120I GGNCC 2 cut(s) 193, 798
BmiI GGNNCC 5 cut(s) 194, 406, 523, 719, 799
BmrFI CCNGG 3 cut(s) 409, 459, 554
BmrI ACTGGG 1 cut(s) 999
BmsI GCATC 1 cut(s) 518
BmuI ACTGGG 1 cut(s) 999
BoxI GACNNNNGTC 1 cut(s) 884
BpiI GAAGAC 1 cut(s) 252
BpmI CTGGAG 1 cut(s) 888
Bpu1102I GCTNAGC 2 cut(s) 363, 375
BpuEI CTTGAG 1 cut(s) 750
BpuMI CCSGG 1 cut(s) 554
BsaHI GRCGYC 2 cut(s) 522, 614
BsaJI CCNNGG 2 cut(s) 196, 458
BsaXI ACNNNNNCTCC 2 cut(s) 92, 122
Bsc4I CCNNNNNNNGG 2 cut(s) 623, 981
Bse1I ACTGG 3 cut(s) 764, 888, 994
Bse3DI GCAATG 1 cut(s) 313
BseBI CCWGG 2 cut(s) 409, 459
BseDI CCNNGG 2 cut(s) 196, 458
BseGI GGATG 3 cut(s) 533, 815, 1121
BseLI CCNNNNNNNGG 2 cut(s) 623, 981
BseMI GCAATG 1 cut(s) 313
BseMII CTCAG 2 cut(s) 377, 1039
BseNI ACTGG 3 cut(s) 764, 888, 994
BseXI GCAGC 4 cut(s) 461, 475, 680, 827
Bsh1236I CGCG 2 cut(s) 216, 589
Bsh1285I CGRYCG 1 cut(s) 402
BshFI GGCC 5 cut(s) 424, 592, 763, 800, 1054
BshNI GGYRCC 2 cut(s) 404, 521
BsiEI CGRYCG 1 cut(s) 402
BsiHKAI GWGCWC 4 cut(s) 257, 364, 508, 852
BsiSI CCGG 2 cut(s) 525, 553
BslFI GGGAC 1 cut(s) 206
BslI CCNNNNNNNGG 2 cut(s) 623, 981
BsmFI GGGAC 1 cut(s) 206
BsnI GGCC 5 cut(s) 424, 592, 763, 800, 1054
Bsp1286I GDGCHC 4 cut(s) 257, 364, 508, 852
Bsp143I GATC 8 cut(s) 226, 239, 336, 399, 541, 835, 925, 1114
Bsp1720I GCTNAGC 2 cut(s) 363, 375
BspACI CCGC 5 cut(s) 33, 114, 151, 276, 589
BspANI GGCC 5 cut(s) 424, 592, 763, 800, 1054
BspCNI CTCAG 2 cut(s) 376, 1038
BspFNI CGCG 2 cut(s) 216, 589
BspHI TCATGA 1 cut(s) 741
BspLI GGNNCC 5 cut(s) 194, 406, 523, 719, 799
BspMI ACCTGC 1 cut(s) 357
BspPI GGATC 3 cut(s) 247, 344, 830
BspT107I GGYRCC 2 cut(s) 404, 521
BsrDI GCAATG 1 cut(s) 313
BsrI ACTGG 3 cut(s) 764, 888, 994
BssECI CCNNGG 2 cut(s) 196, 458
BssMI GATC 8 cut(s) 226, 239, 336, 399, 541, 835, 925, 1114
BssNI GRCGYC 2 cut(s) 522, 614
Bst2UI CCWGG 2 cut(s) 409, 459
Bst4CI ACNGT 3 cut(s) 171, 197, 1111
Bst6I CTCTTC 1 cut(s) 740
BstACI GRCGYC 2 cut(s) 522, 614
BstC8I GCNNGC 3 cut(s) 360, 381, 385
BstDEI CTNAG 3 cut(s) 363, 375, 1025
BstDSI CCRYGG 1 cut(s) 196
BstF5I GGATG 3 cut(s) 533, 815, 1121
BstFNI CGCG 2 cut(s) 216, 589
BstH2I RGCGCY 2 cut(s) 525, 1173
BstHHI GCGC 2 cut(s) 524, 1172
BstKTI GATC 8 cut(s) 229, 242, 339, 402, 544, 838, 928, 1117
BstMBI GATC 8 cut(s) 226, 239, 336, 399, 541, 835, 925, 1114
BstMCI CGRYCG 1 cut(s) 402
BstMWI GCNNNNNNNGC 5 cut(s) 364, 380, 449, 528, 702
BstNI CCWGG 2 cut(s) 409, 459
BstNSI RCATGY 1 cut(s) 250
BstPAI GACNNNNGTC 1 cut(s) 884
BstSCI CCNGG 3 cut(s) 407, 457, 552
BstSFI CTRYAG 1 cut(s) 843
BstUI CGCG 2 cut(s) 216, 589
BstV1I GCAGC 4 cut(s) 461, 475, 680, 827
BstV2I GAAGAC 1 cut(s) 252
BsuI GTATCC 2 cut(s) 196, 1025
BsuRI GGCC 5 cut(s) 424, 592, 763, 800, 1054
BtgI CCRYGG 1 cut(s) 196
BtgZI GCGATG 1 cut(s) 1168
BtsCI GGATG 3 cut(s) 533, 815, 1121
BtsI GCAGTG 1 cut(s) 123
BtsIMutI CAGTG 3 cut(s) 123, 881, 1033
BveI ACCTGC 1 cut(s) 357
Cac8I GCNNGC 3 cut(s) 360, 381, 385
CciI TCATGA 1 cut(s) 741
CfoI GCGC 2 cut(s) 524, 1172
Cfr13I GGNCC 2 cut(s) 193, 798
CseI GACGC 1 cut(s) 622
CsiI ACCWGGT 1 cut(s) 407
Csp6I GTAC 5 cut(s) 330, 346, 579, 859, 1057
CviAII CATG 3 cut(s) 247, 742, 1009
CviQI GTAC 5 cut(s) 330, 346, 579, 859, 1057
DdeI CTNAG 3 cut(s) 363, 375, 1025
DinI GGCGCC 1 cut(s) 523
DpnI GATC 8 cut(s) 228, 241, 338, 401, 543, 837, 927, 1116
DpnII GATC 8 cut(s) 226, 239, 336, 399, 541, 835, 925, 1114
EaeI YGGCCR 1 cut(s) 1052
Eam1104I CTCTTC 1 cut(s) 740
EarI CTCTTC 1 cut(s) 740
Ecl136II GAGCTC 2 cut(s) 362, 506
Eco24I GRGCYC 2 cut(s) 364, 508
Eco32I GATATC 1 cut(s) 565
Eco47I GGWCC 1 cut(s) 193
Eco53kI GAGCTC 2 cut(s) 362, 506
EcoICRI GAGCTC 2 cut(s) 362, 506
EcoO109I RGGNCCY 1 cut(s) 798
EcoRII CCWGG 2 cut(s) 407, 457
EcoRV GATATC 1 cut(s) 565
EcoT38I GRGCYC 2 cut(s) 364, 508
EgeI GGCGCC 1 cut(s) 523
EheI GGCGCC 1 cut(s) 523
FaeI CATG 3 cut(s) 250, 745, 1012
FaqI GGGAC 1 cut(s) 206
FatI CATG 3 cut(s) 246, 741, 1008
FbaI TGATCA 1 cut(s) 226
FblI GTMKAC 1 cut(s) 947
Fnu4HI GCNGC 6 cut(s) 276, 450, 464, 590, 694, 816
FokI GGATG 3 cut(s) 540, 822, 1108
FriOI GRGCYC 2 cut(s) 364, 508
Fsp4HI GCNGC 6 cut(s) 276, 450, 464, 590, 694, 816
FspBI CTAG 1 cut(s) 776
GlaI GCGC 2 cut(s) 523, 1171
GluI GCNGC 6 cut(s) 276, 450, 464, 590, 694, 816
GsuI CTGGAG 1 cut(s) 888
HaeII RGCGCY 2 cut(s) 525, 1173
HaeIII GGCC 5 cut(s) 424, 592, 763, 800, 1054
HapII CCGG 2 cut(s) 525, 553
HgaI GACGC 1 cut(s) 622
HhaI GCGC 2 cut(s) 524, 1172
Hin1I GRCGYC 2 cut(s) 522, 614
Hin1II CATG 3 cut(s) 250, 745, 1012
Hin6I GCGC 2 cut(s) 522, 1170
HinP1I GCGC 2 cut(s) 522, 1170
HincII GTYRAC 2 cut(s) 438, 550
HindII GTYRAC 2 cut(s) 438, 550
HinfI GANTC 3 cut(s) 5, 234, 968
HpaII CCGG 2 cut(s) 525, 553
HphI GGTGA 2 cut(s) 255, 721
Hpy166II GTNNAC 3 cut(s) 438, 550, 948
Hpy188I TCNGA 4 cut(s) 51, 239, 612, 930
Hpy188III TCNNGA 4 cut(s) 470, 742, 867, 911
Hpy8I GTNNAC 3 cut(s) 438, 550, 948
HpyAV CCTTC 2 cut(s) 276, 683
HpyCH4III ACNGT 3 cut(s) 171, 197, 1111
HpyCH4IV ACGT 1 cut(s) 577
HpyCH4V TGCA 8 cut(s) 210, 290, 531, 599, 905, 1008, 1079, 1137
HpyF10VI GCNNNNNNNGC 5 cut(s) 364, 380, 449, 528, 702
HpyF3I CTNAG 3 cut(s) 363, 375, 1025
HpySE526I ACGT 1 cut(s) 577
Hsp92I GRCGYC 2 cut(s) 522, 614
Hsp92II CATG 3 cut(s) 250, 745, 1012
HspAI GCGC 2 cut(s) 522, 1170
KasI GGCGCC 1 cut(s) 521
Ksp22I TGATCA 1 cut(s) 226
Kzo9I GATC 8 cut(s) 226, 239, 336, 399, 541, 835, 925, 1114
LmnI GCTCC 2 cut(s) 503, 855
Lsp1109I GCAGC 4 cut(s) 461, 475, 680, 827
LweI GCATC 1 cut(s) 518
MabI ACCWGGT 1 cut(s) 407
MaeI CTAG 1 cut(s) 776
MaeII ACGT 1 cut(s) 577
MalI GATC 8 cut(s) 228, 241, 338, 401, 543, 837, 927, 1116
MboI GATC 8 cut(s) 226, 239, 336, 399, 541, 835, 925, 1114
MboII GAAGA 4 cut(s) 84, 252, 757, 932
MfeI CAATTG 2 cut(s) 647, 677
MhlI GDGCHC 4 cut(s) 257, 364, 508, 852
Mly113I GGCGCC 1 cut(s) 522
MlyI GAGTC 3 cut(s) 14, 228, 962
MnlI CCTC 9 cut(s) 75, 118, 278, 319, 398, 603, 747, 774, 1034
MseI TTAA 3 cut(s) 477, 803, 942
MspI CCGG 2 cut(s) 525, 553
MspR9I CCNGG 3 cut(s) 409, 459, 554
MunI CAATTG 2 cut(s) 647, 677
MvaI CCWGG 2 cut(s) 409, 459
MvnI CGCG 2 cut(s) 216, 589
MwoI GCNNNNNNNGC 5 cut(s) 364, 380, 449, 528, 702
NarI GGCGCC 1 cut(s) 522
NciI CCSGG 1 cut(s) 554
NdeII GATC 8 cut(s) 226, 239, 336, 399, 541, 835, 925, 1114
NlaIII CATG 3 cut(s) 250, 745, 1012
NlaIV GGNNCC 5 cut(s) 194, 406, 523, 719, 799
NspI RCATGY 1 cut(s) 250
PagI TCATGA 1 cut(s) 741
PciI ACATGT 1 cut(s) 246
PcsI WCGNNNNNNNCGW 2 cut(s) 248, 387
PflMI CCANNNNNTGG 1 cut(s) 981
PkrI GCNGC 6 cut(s) 277, 451, 465, 591, 695, 817
Ple19I CGATCG 1 cut(s) 402
PleI GAGTC 3 cut(s) 13, 228, 962
PluTI GGCGCC 1 cut(s) 525
PpsI GAGTC 3 cut(s) 13, 228, 962
PscI ACATGT 1 cut(s) 246
PshAI GACNNNNGTC 1 cut(s) 884
Psp124BI GAGCTC 2 cut(s) 364, 508
Psp6I CCWGG 2 cut(s) 407, 457
PspGI CCWGG 2 cut(s) 407, 457
PspN4I GGNNCC 5 cut(s) 194, 406, 523, 719, 799
PspPI GGNCC 2 cut(s) 193, 798
PvuI CGATCG 1 cut(s) 402
RsaI GTAC 5 cut(s) 331, 347, 580, 860, 1058
RsaNI GTAC 5 cut(s) 330, 346, 579, 859, 1057
SacI GAGCTC 2 cut(s) 364, 508
SaqAI TTAA 3 cut(s) 477, 803, 942
SatI GCNGC 6 cut(s) 276, 450, 464, 590, 694, 816
Sau3AI GATC 8 cut(s) 226, 239, 336, 399, 541, 835, 925, 1114
Sau96I GGNCC 2 cut(s) 193, 798
SchI GAGTC 3 cut(s) 14, 228, 962
ScrFI CCNGG 3 cut(s) 409, 459, 554
SduI GDGCHC 4 cut(s) 257, 364, 508, 852
SexAI ACCWGGT 1 cut(s) 407
SfaNI GCATC 1 cut(s) 518
SfcI CTRYAG 1 cut(s) 843
SfoI GGCGCC 1 cut(s) 523
SinI GGWCC 1 cut(s) 193
SmlI CTYRAG 1 cut(s) 765
SmoI CTYRAG 1 cut(s) 765
SsiI CCGC 5 cut(s) 33, 114, 151, 276, 589
SspDI GGCGCC 1 cut(s) 521
SspMI CTAG 1 cut(s) 776
SstI GAGCTC 2 cut(s) 364, 508
StyD4I CCNGG 3 cut(s) 407, 457, 552
TaaI ACNGT 3 cut(s) 171, 197, 1111
TaiI ACGT 1 cut(s) 580
TaqI TCGA 3 cut(s) 339, 390, 1154
TatI WGTACW 1 cut(s) 858
TauI GCSGC 2 cut(s) 278, 592
Tru1I TTAA 3 cut(s) 477, 803, 942
Tru9I TTAA 3 cut(s) 477, 803, 942
TscAI CASTG 3 cut(s) 130, 888, 1033
TseI GCWGC 4 cut(s) 449, 463, 693, 815
TspDTI ATGAA 6 cut(s) 48, 699, 758, 1110, 1171, 1197
TspRI CASTG 3 cut(s) 130, 888, 1033
Van91I CCANNNNNTGG 1 cut(s) 981
VpaK11BI GGWCC 1 cut(s) 193
XapI RAATTY 3 cut(s) 666, 959, 1145
XceI RCATGY 1 cut(s) 250
XmiI GTMKAC 1 cut(s) 947
XspI CTAG 1 cut(s) 776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.