Prupe.1G346600_v2.0.a1

glutamine synthetase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
32395223 .. 32399195
3973 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G346600.1

Sequence Viewer

Length: 1071 bp
ATGTCTCTCCTCTCTGATCTCATCAATCTCAATCTCTCTGATTCCACTGAGAAGATCATCGCTGAATACATATGGATTGGTGGATCTGGTTTGGACTTGAGAAGCAAAGCAAGGACTCTGCCCGGACCGGTGACGGACCCATCAAAACTCCCCAAGTGGAACTACGACGGTTCAAGCACCGACCAAGCCCCAGGAGACGACAGTGAAGTCATCTTGTATCCCCAGGCTATTTTCAAGGACCCATTCAGAAGAGGAAAGAACGTCCTGGTCATATGCGATGCGTACACACCGGCTGGGGTGCCAATCCCCACCAACAAGAGATTCAATGCTGCCAAGATATTCAGTCACCCCGACGTTGTCGCCGAGGAGCCTTGGTATGGCATTGAGCAGGAGTACACTCTTCTTCAGAAGGATACTAAATGGCCTCTTGGATGGCCAGTGGGTGGCTTCCCAGGTCCACAGGGACCCTACTATTGTGGTGCCGGGGCTGACAAGGCCTTCGGCCGTGATATTGTGGATTCACACTACAAGGCCTGCCTCTTTGCCGGTATCAACGTCAGTGGAATCAATGCTGAAGTTATGCCAGGCCAGTGGGAGTTTCAAGTTGGCCCTACAGTTGGTATTGCTGCTGGAGATCAACTATGGGCTGCTAGATACATCCTTGAGAGAATCACAGAAATTGCAGGAGTTATTCTTTCTTTGGACCCAAAACCAATCCAGGGTGACTGGAACGGTGCTGGCGCTCACACTAACTACAGTACCAAGTCAATGAGAAATGATGGTGGAATTGATGTGATCAAGAAGGCGATTGAGAAACTGAGTTTGTGCCACAAGGAGCACATTGCTGCATATGGAAAAGGCAACGAGAGGAGATTGACTGGTCGCCATGAGACTGCTGACATCCACACTTTCTCTTGGGGCGTGGCAAACAGGGGAGCCTCCGTCCGTGTTGGTCGTGATACTGAAAAAGCTGGGAAAGGATATTTTGAGGACCGAAGGCCGGCGTCCAACATGGATCCATACGTAGTAACTTCCATGATCGCTGAAACCACCATTCTCTCCAAGTCTTAG

Protein Analysis

357

Amino Acids

38.9

Weight (kDa)

6.19

Isoelectric Point (pI)

38.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 206
AccB1I GGYRCC 2 cut(s) 298, 479
AccB7I CCANNNNNTGG 1 cut(s) 443
AclWI GGATC 3 cut(s) 91, 1010, 1023
AcoI YGGCCR 2 cut(s) 434, 502
AcuI CTGAAG 2 cut(s) 389, 594
AcyI GRCGYC 1 cut(s) 1004
AfaI GTAC 3 cut(s) 284, 395, 760
AfiI CCNNNNNNNGG 5 cut(s) 377, 443, 617, 719, 1000
AgeI ACCGGT 1 cut(s) 127
AgsI TTSAA 4 cut(s) 174, 235, 325, 602
AjnI CCWGG 6 cut(s) 190, 222, 264, 451, 583, 717
AjuI GAANNNNNNNTTGG 2 cut(s) 305, 337
AluBI AGCT 1 cut(s) 971
AluI AGCT 1 cut(s) 971
Alw21I GWGCWC 1 cut(s) 840
Alw26I GTCTC 3 cut(s) 9, 189, 884
AlwI GGATC 3 cut(s) 91, 1010, 1023
AoxI GGCC 8 cut(s) 422, 434, 495, 502, 531, 586, 607, 998
ApeKI GCWGC 4 cut(s) 329, 626, 647, 845
ArsI GACNNNNNNTTYG 2 cut(s) 482, 514
AsiGI ACCGGT 1 cut(s) 127
AspLEI GCGC 1 cut(s) 743
AspS9I GGNCC 8 cut(s) 125, 136, 238, 455, 464, 608, 703, 991
AsuC2I CCSGG 2 cut(s) 123, 484
AsuHPI GGTGA 3 cut(s) 142, 338, 734
AvaII GGWCC 7 cut(s) 125, 136, 238, 455, 464, 703, 991
BaeI ACNNNNGTAYC 2 cut(s) 742, 775
BalI TGGCCA 1 cut(s) 436
BamHI GGATCC 1 cut(s) 1015
BanI GGYRCC 2 cut(s) 298, 479
Bbv12I GWGCWC 1 cut(s) 840
BbvI GCAGC 4 cut(s) 316, 613, 634, 832
BccI CCATC 3 cut(s) 148, 426, 773
BceAI ACGGC 1 cut(s) 489
BciT130I CCWGG 6 cut(s) 192, 224, 266, 453, 585, 719
BciVI GTATCC 2 cut(s) 228, 406
BclI TGATCA 1 cut(s) 795
BcnI CCSGG 2 cut(s) 123, 484
BcoDI GTCTC 3 cut(s) 9, 189, 884
BfaI CTAG 1 cut(s) 651
BfmI CTRYAG 2 cut(s) 612, 754
BfoI RGCGCY 1 cut(s) 744
BfuI GTATCC 2 cut(s) 228, 406
BisI GCNGC 4 cut(s) 330, 627, 648, 846
BlsI GCNGC 4 cut(s) 331, 628, 649, 847
Bme1390I CCNGG 8 cut(s) 123, 192, 224, 266, 453, 484, 585, 719
Bme18I GGWCC 7 cut(s) 125, 136, 238, 455, 464, 703, 991
BmgT120I GGNCC 8 cut(s) 125, 136, 238, 455, 464, 608, 703, 991
BmrFI CCNGG 8 cut(s) 123, 192, 224, 266, 453, 484, 585, 719
BmsI GCATC 1 cut(s) 268
BpmI CTGGAG 1 cut(s) 651
BpuEI CTTGAG 2 cut(s) 118, 683
BpuMI CCSGG 2 cut(s) 123, 484
BsaAI YACGTR 1 cut(s) 1024
BsaHI GRCGYC 1 cut(s) 1004
BsaJI CCNNGG 7 cut(s) 190, 222, 363, 371, 451, 483, 718
BsaWI WCCGGW 1 cut(s) 127
BsaXI ACNNNNNCTCC 4 cut(s) 359, 389, 927, 957
Bsc4I CCNNNNNNNGG 5 cut(s) 377, 443, 617, 719, 1000
Bse118I RCCGGY 4 cut(s) 127, 289, 545, 1000
Bse1I ACTGG 4 cut(s) 437, 589, 731, 883
Bse3DI GCAATG 1 cut(s) 840
BseBI CCWGG 6 cut(s) 192, 224, 266, 453, 585, 719
BseDI CCNNGG 7 cut(s) 190, 222, 363, 371, 451, 483, 718
BseGI GGATG 3 cut(s) 437, 657, 900
BseLI CCNNNNNNNGG 5 cut(s) 377, 443, 617, 719, 1000
BseMI GCAATG 1 cut(s) 840
BseMII CTCAG 2 cut(s) 39, 809
BseNI ACTGG 4 cut(s) 437, 589, 731, 883
BseRI GAGGAG 2 cut(s) 380, 883
BseX3I CGGCCG 1 cut(s) 502
BseXI GCAGC 4 cut(s) 316, 613, 634, 832
BseYI CCCAGC 2 cut(s) 293, 971
Bsh1285I CGRYCG 1 cut(s) 505
BshFI GGCC 8 cut(s) 424, 436, 497, 504, 533, 588, 609, 1000
BshNI GGYRCC 2 cut(s) 298, 479
BshTI ACCGGT 1 cut(s) 127
BsiEI CGRYCG 1 cut(s) 505
BsiHKAI GWGCWC 1 cut(s) 840
BsiSI CCGG 6 cut(s) 123, 128, 290, 483, 546, 1001
BslFI GGGAC 1 cut(s) 477
BslI CCNNNNNNNGG 5 cut(s) 377, 443, 617, 719, 1000
BsmAI GTCTC 3 cut(s) 9, 189, 884
BsmBI CGTCTC 1 cut(s) 189
BsmFI GGGAC 1 cut(s) 477
BsnI GGCC 8 cut(s) 424, 436, 497, 504, 533, 588, 609, 1000
Bsp1286I GDGCHC 1 cut(s) 840
Bsp143I GATC 7 cut(s) 16, 54, 83, 634, 795, 1015, 1038
BspANI GGCC 8 cut(s) 424, 436, 497, 504, 533, 588, 609, 1000
BspCNI CTCAG 2 cut(s) 40, 810
BspPI GGATC 3 cut(s) 91, 1010, 1023
BspT107I GGYRCC 2 cut(s) 298, 479
BsrDI GCAATG 1 cut(s) 840
BsrFI RCCGGY 4 cut(s) 127, 289, 545, 1000
BsrI ACTGG 4 cut(s) 437, 589, 731, 883
BssAI RCCGGY 4 cut(s) 127, 289, 545, 1000
BssECI CCNNGG 7 cut(s) 190, 222, 363, 371, 451, 483, 718
BssMI GATC 7 cut(s) 16, 54, 83, 634, 795, 1015, 1038
BssNI GRCGYC 1 cut(s) 1004
BssT1I CCWWGG 1 cut(s) 371
Bst2UI CCWGG 6 cut(s) 192, 224, 266, 453, 585, 719
Bst4CI ACNGT 5 cut(s) 170, 203, 616, 734, 758
Bst6I CTCTTC 2 cut(s) 244, 405
BstACI GRCGYC 1 cut(s) 1004
BstBAI YACGTR 1 cut(s) 1024
BstC8I GCNNGC 3 cut(s) 535, 739, 1002
BstDEI CTNAG 3 cut(s) 48, 818, 1068
BstF5I GGATG 3 cut(s) 437, 657, 900
BstH2I RGCGCY 1 cut(s) 744
BstHHI GCGC 1 cut(s) 743
BstKTI GATC 7 cut(s) 19, 57, 86, 637, 798, 1018, 1041
BstMAI GTCTC 3 cut(s) 9, 189, 884
BstMBI GATC 7 cut(s) 16, 54, 83, 634, 795, 1015, 1038
BstMCI CGRYCG 1 cut(s) 505
BstMWI GCNNNNNNNGC 1 cut(s) 494
BstNI CCWGG 6 cut(s) 192, 224, 266, 453, 585, 719
BstSCI CCNGG 8 cut(s) 121, 190, 222, 264, 451, 482, 583, 717
BstSFI CTRYAG 2 cut(s) 612, 754
BstSNI TACGTA 1 cut(s) 1024
BstV1I GCAGC 4 cut(s) 316, 613, 634, 832
BstX2I RGATCY 2 cut(s) 83, 1015
BstXI CCANNNNNNTGG 1 cut(s) 591
BstYI RGATCY 2 cut(s) 83, 1015
BstZI CGGCCG 1 cut(s) 502
BsuI GTATCC 2 cut(s) 228, 406
BsuRI GGCC 8 cut(s) 424, 436, 497, 504, 533, 588, 609, 1000
BtgZI GCGATG 2 cut(s) 43, 291
BtsCI GGATG 3 cut(s) 437, 657, 900
BtsIMutI CAGTG 5 cut(s) 45, 208, 444, 565, 596
Cac8I GCNNGC 3 cut(s) 535, 739, 1002
CfoI GCGC 1 cut(s) 743
Cfr10I RCCGGY 4 cut(s) 127, 289, 545, 1000
Cfr13I GGNCC 8 cut(s) 125, 136, 238, 455, 464, 608, 703, 991
CpoI CGGWCCG 1 cut(s) 125
CseI GACGC 1 cut(s) 993
Csp6I GTAC 3 cut(s) 283, 394, 759
CspAI ACCGGT 1 cut(s) 127
CspCI CAANNNNNGTGG 2 cut(s) 541, 576
CspI CGGWCCG 1 cut(s) 125
CviAII CATG 3 cut(s) 887, 1012, 1036
CviQI GTAC 3 cut(s) 283, 394, 759
DdeI CTNAG 3 cut(s) 48, 818, 1068
DpnI GATC 7 cut(s) 18, 56, 85, 636, 797, 1017, 1040
DpnII GATC 7 cut(s) 16, 54, 83, 634, 795, 1015, 1038
DrdI GACNNNNNNGTC 1 cut(s) 206
DseDI GACNNNNNNGTC 1 cut(s) 206
EaeI YGGCCR 2 cut(s) 434, 502
EagI CGGCCG 1 cut(s) 502
Eam1104I CTCTTC 2 cut(s) 244, 405
EarI CTCTTC 2 cut(s) 244, 405
EclXI CGGCCG 1 cut(s) 502
Eco105I TACGTA 1 cut(s) 1024
Eco130I CCWWGG 1 cut(s) 371
Eco147I AGGCCT 2 cut(s) 497, 533
Eco47I GGWCC 7 cut(s) 125, 136, 238, 455, 464, 703, 991
Eco52I CGGCCG 1 cut(s) 502
Eco57I CTGAAG 2 cut(s) 389, 594
EcoO109I RGGNCCY 2 cut(s) 238, 464
EcoRII CCWGG 6 cut(s) 190, 222, 264, 451, 583, 717
EcoT14I CCWWGG 1 cut(s) 371
ErhI CCWWGG 1 cut(s) 371
Esp3I CGTCTC 1 cut(s) 189
FaeI CATG 3 cut(s) 890, 1015, 1039
FaqI GGGAC 1 cut(s) 477
FatI CATG 3 cut(s) 886, 1011, 1035
FauNDI CATATG 3 cut(s) 71, 272, 850
FbaI TGATCA 1 cut(s) 795
Fnu4HI GCNGC 4 cut(s) 330, 627, 648, 846
FokI GGATG 3 cut(s) 444, 644, 887
Fsp4HI GCNGC 4 cut(s) 330, 627, 648, 846
FspBI CTAG 1 cut(s) 651
GlaI GCGC 1 cut(s) 742
GluI GCNGC 4 cut(s) 330, 627, 648, 846
GsaI CCCAGC 2 cut(s) 297, 975
GsuI CTGGAG 1 cut(s) 651
HaeII RGCGCY 1 cut(s) 744
HaeIII GGCC 8 cut(s) 424, 436, 497, 504, 533, 588, 609, 1000
HapII CCGG 6 cut(s) 123, 128, 290, 483, 546, 1001
HgaI GACGC 1 cut(s) 993
HhaI GCGC 1 cut(s) 743
Hin1I GRCGYC 1 cut(s) 1004
Hin1II CATG 3 cut(s) 890, 1015, 1039
Hin6I GCGC 1 cut(s) 741
HinP1I GCGC 1 cut(s) 741
HinfI GANTC 6 cut(s) 41, 115, 321, 518, 564, 669
HpaII CCGG 6 cut(s) 123, 128, 290, 483, 546, 1001
HphI GGTGA 3 cut(s) 142, 338, 734
Hpy166II GTNNAC 3 cut(s) 285, 396, 458
Hpy188I TCNGA 4 cut(s) 16, 40, 248, 408
Hpy188III TCNNGA 2 cut(s) 799, 956
Hpy8I GTNNAC 3 cut(s) 285, 396, 458
Hpy99I CGWCG 2 cut(s) 170, 356
HpyAV CCTTC 4 cut(s) 403, 508, 796, 990
HpyCH4III ACNGT 5 cut(s) 170, 203, 616, 734, 758
HpyCH4IV ACGT 4 cut(s) 261, 354, 555, 1023
HpyCH4V TGCA 2 cut(s) 683, 848
HpyF10VI GCNNNNNNNGC 1 cut(s) 494
HpyF3I CTNAG 3 cut(s) 48, 818, 1068
HpySE526I ACGT 4 cut(s) 261, 354, 555, 1023
Hsp92I GRCGYC 1 cut(s) 1004
Hsp92II CATG 3 cut(s) 890, 1015, 1039
HspAI GCGC 1 cut(s) 741
KflI GGGWCCC 1 cut(s) 464
KroI GCCGGC 1 cut(s) 1000
KroNI GCCGGC 1 cut(s) 1002
Ksp22I TGATCA 1 cut(s) 795
Kzo9I GATC 7 cut(s) 16, 54, 83, 634, 795, 1015, 1038
LmnI GCTCC 3 cut(s) 367, 835, 935
Lsp1109I GCAGC 4 cut(s) 316, 613, 634, 832
LweI GCATC 1 cut(s) 268
MaeI CTAG 1 cut(s) 651
MaeII ACGT 4 cut(s) 261, 354, 555, 1023
MaeIII GTNAC 4 cut(s) 130, 344, 722, 1027
MalI GATC 7 cut(s) 18, 56, 85, 636, 797, 1017, 1040
MboI GATC 7 cut(s) 16, 54, 83, 634, 795, 1015, 1038
MboII GAAGA 4 cut(s) 64, 261, 392, 395
MflI RGATCY 2 cut(s) 83, 1015
MhlI GDGCHC 1 cut(s) 840
MlsI TGGCCA 1 cut(s) 436
MluCI AATT 2 cut(s) 678, 786
MluNI TGGCCA 1 cut(s) 436
MlyI GAGTC 1 cut(s) 109
MmeI TCCRAC 1 cut(s) 1032
MnlI CCTC 8 cut(s) 20, 245, 358, 435, 548, 861, 949, 982
Mox20I TGGCCA 1 cut(s) 436
MroNI GCCGGC 1 cut(s) 1000
MscI TGGCCA 1 cut(s) 436
Msp20I TGGCCA 1 cut(s) 436
MspI CCGG 6 cut(s) 123, 128, 290, 483, 546, 1001
MspR9I CCNGG 8 cut(s) 123, 192, 224, 266, 453, 484, 585, 719
MvaI CCWGG 6 cut(s) 192, 224, 266, 453, 585, 719
MwoI GCNNNNNNNGC 1 cut(s) 494
NaeI GCCGGC 1 cut(s) 1002
NciI CCSGG 2 cut(s) 123, 484
NdeI CATATG 3 cut(s) 71, 272, 850
NdeII GATC 7 cut(s) 16, 54, 83, 634, 795, 1015, 1038
NgoMIV GCCGGC 1 cut(s) 1000
NlaIII CATG 3 cut(s) 890, 1015, 1039
NmeAIII GCCGAG 1 cut(s) 388
NmuCI GTSAC 3 cut(s) 130, 344, 722
PceI AGGCCT 2 cut(s) 497, 533
PcsI WCGNNNNNNNCGW 1 cut(s) 360
PdiI GCCGGC 1 cut(s) 1002
PfeI GAWTC 5 cut(s) 41, 321, 518, 564, 669
PflFI GACNNNGTC 1 cut(s) 356
PflMI CCANNNNNTGG 1 cut(s) 443
PinAI ACCGGT 1 cut(s) 127
PkrI GCNGC 4 cut(s) 331, 628, 649, 847
PleI GAGTC 1 cut(s) 109
PpsI GAGTC 1 cut(s) 109
Ppu21I YACGTR 1 cut(s) 1024
PpuMI RGGWCCY 2 cut(s) 238, 464
Psp5II RGGWCCY 2 cut(s) 238, 464
Psp6I CCWGG 6 cut(s) 190, 222, 264, 451, 583, 717
PspFI CCCAGC 2 cut(s) 293, 971
PspGI CCWGG 6 cut(s) 190, 222, 264, 451, 583, 717
PspPI GGNCC 8 cut(s) 125, 136, 238, 455, 464, 608, 703, 991
PspPPI RGGWCCY 2 cut(s) 238, 464
PsuI RGATCY 2 cut(s) 83, 1015
PsyI GACNNNGTC 1 cut(s) 356
RsaI GTAC 3 cut(s) 284, 395, 760
RsaNI GTAC 3 cut(s) 283, 394, 759
Rsr2I CGGWCCG 1 cut(s) 125
RsrII CGGWCCG 1 cut(s) 125
SatI GCNGC 4 cut(s) 330, 627, 648, 846
Sau3AI GATC 7 cut(s) 16, 54, 83, 634, 795, 1015, 1038
Sau96I GGNCC 8 cut(s) 125, 136, 238, 455, 464, 608, 703, 991
SchI GAGTC 1 cut(s) 109
ScrFI CCNGG 8 cut(s) 123, 192, 224, 266, 453, 484, 585, 719
SduI GDGCHC 1 cut(s) 840
SetI ASST 6 cut(s) 264, 357, 457, 558, 973, 1026
SfaNI GCATC 1 cut(s) 268
SfcI CTRYAG 2 cut(s) 612, 754
SinI GGWCC 7 cut(s) 125, 136, 238, 455, 464, 703, 991
SmlI CTYRAG 2 cut(s) 97, 662
SmoI CTYRAG 2 cut(s) 97, 662
SnaBI TACGTA 1 cut(s) 1024
Sse9I AATT 2 cut(s) 678, 786
SseBI AGGCCT 2 cut(s) 497, 533
SspMI CTAG 1 cut(s) 651
StuI AGGCCT 2 cut(s) 497, 533
StyD4I CCNGG 8 cut(s) 121, 190, 222, 264, 451, 482, 583, 717
StyI CCWWGG 1 cut(s) 371
TaaI ACNGT 5 cut(s) 170, 203, 616, 734, 758
TaiI ACGT 4 cut(s) 264, 357, 558, 1026
TaqII GACCGA 1 cut(s) 1008
TasI AATT 2 cut(s) 678, 786
TatI WGTACW 1 cut(s) 393
TfiI GAWTC 5 cut(s) 41, 321, 518, 564, 669
TscAI CASTG 5 cut(s) 52, 208, 444, 565, 596
TseFI GTSAC 3 cut(s) 130, 344, 722
TseI GCWGC 4 cut(s) 329, 626, 647, 845
Tsp45I GTSAC 3 cut(s) 130, 344, 722
TspGWI ACGGA 3 cut(s) 149, 931, 935
TspRI CASTG 5 cut(s) 52, 208, 444, 565, 596
Tth111I GACNNNGTC 1 cut(s) 356
Van91I CCANNNNNTGG 1 cut(s) 443
VpaK11BI GGWCC 7 cut(s) 125, 136, 238, 455, 464, 703, 991
XspI CTAG 1 cut(s) 651
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.