Rh3BG333800

glutamine synthetase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Forward (+)
35222000 .. 35225194
3195 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG333800.1

Sequence Viewer

Length: 981 bp
ATGGATCTCAGAAGCAAAGGAAGGACTCTGCCAGGACCTGTTACTGACCCCTCAAAACTCCCCAAATGGAACTATGATGGATCTAGCACAGGTCAAGCTCCAGGGGAAGACAGTGAAGTCATCCTATACCCTCAAGCCATTTTCAAGGACCCATTTAGGAGAGGCAACAATATCTTGGTTATGTGTGATACTTATACTCCGGCTGGAGAACCAATTCCAACAAACAAGAGATGTACTGCAGCAAAGATATTCAGCCATCCTGATGTTGCTGCTGAAGAGCCCTGGTATGGTCTGGAGCAGGAGTACACCTTGTTGCAGAAAGATGTCAATTGGCCATTGGGATGGCCAATTGGTGGTTTTCCTGGTCCTCAGGGACCGTACTACTGTGCTGCCGGCGCTGACAAAGCATTTGGGCGTGACATTGTTGATTCTCATTACAAGGCCTGCTTGTATGCAGGCATCAACATCAGTGGCATCAACGGTGAAGTCATGCCAGGCCAGTGGGAGTTTCAAGTTGGTCCTTCAGTCGGCATCTCTGCGGGTGATGAATTATGGGTTGCTCGTTATATTTTGGAGAGGATCACAGAGATTGCTGGAGTGGTTCTTTCGTTTGATCCCAAGCCAATCCCTGGTGATTGGAACGGAGCTGGGGCTCACACAAATTACAGTACCAAATCCATGAGACACCAAGGAGGCTATGAAATCATCAAGAAAGCAATTGAGAAGCTGGGACTAAGGCACAAAGAACACATTGCCGCATATGGAGAAGGCAATGAACGCCGATTGACTGGAAGACATGAAACAGCTAACATTCACACCTTCAAATGGGGTGTTGCAGACCGTGGTGCCTCCATCCGCGTTGGCCGTGACACAGAGAAAGAAGGCAAGGGCTATTTTGAGGACAGGAGGCCTGCTTCGAACATGGATCCATATGTGGTGACTTCTATGATCGCCGAGACCACTATTCTGTGGAAGCCATAA

Protein Analysis

326

Amino Acids

36.03

Weight (kDa)

6.27

Isoelectric Point (pI)

43.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gln-synt_N PF03951 24 - 67 2.5e-08 Glutamine synthetase, beta-Grasp domain
Gln-synt_C PF00120 95 - 224 1.5e-10 Glutamine synthetase, catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 116
AccB1I GGYRCC 1 cut(s) 845
AccB7I CCANNNNNTGG 2 cut(s) 353, 629
AccII CGCG 1 cut(s) 858
AciI CCGC 3 cut(s) 539, 756, 856
AclWI GGATC 6 cut(s) 12, 88, 587, 608, 920, 933
AcoI YGGCCR 3 cut(s) 332, 344, 862
AcuI CTGAAG 2 cut(s) 294, 507
AfaI GTAC 4 cut(s) 235, 305, 380, 670
AfiI CCNNNNNNNGG 5 cut(s) 287, 353, 527, 629, 825
AgsI TTSAA 3 cut(s) 145, 512, 823
AjnI CCWGG 6 cut(s) 31, 100, 281, 361, 493, 628
AluBI AGCT 4 cut(s) 98, 647, 727, 806
AluI AGCT 4 cut(s) 98, 647, 727, 806
Alw26I GTCTC 2 cut(s) 676, 950
AlwI GGATC 6 cut(s) 12, 88, 587, 608, 920, 933
AlwNI CAGNNNCTG 1 cut(s) 38
AoxI GGCC 6 cut(s) 332, 344, 441, 496, 862, 908
ApeKI GCWGC 3 cut(s) 239, 269, 389
ArsI GACNNNNNNTTYG 2 cut(s) 392, 424
Asp700I GAANNNNTTC 1 cut(s) 213
AspLEI GCGC 1 cut(s) 398
AspS9I GGNCC 5 cut(s) 35, 148, 365, 374, 518
AsuHPI GGTGA 4 cut(s) 494, 554, 644, 949
AsuII TTCGAA 1 cut(s) 917
AvaII GGWCC 5 cut(s) 35, 148, 365, 374, 518
AxyI CCTNAGG 1 cut(s) 369
BalI TGGCCA 2 cut(s) 334, 346
BamHI GGATCC 1 cut(s) 925
BanI GGYRCC 1 cut(s) 845
BanII GRGCYC 2 cut(s) 282, 655
BbsI GAAGAC 2 cut(s) 114, 799
BbvI GCAGC 3 cut(s) 251, 256, 376
BccI CCATC 4 cut(s) 71, 264, 336, 860
BceAI ACGGC 1 cut(s) 849
BciT130I CCWGG 6 cut(s) 33, 102, 283, 363, 495, 630
BcoDI GTCTC 2 cut(s) 676, 950
BfaI CTAG 1 cut(s) 84
BfmI CTRYAG 1 cut(s) 237
BfoI RGCGCY 1 cut(s) 399
BisI GCNGC 4 cut(s) 240, 270, 390, 756
BlsI GCNGC 4 cut(s) 241, 271, 391, 757
Bme1390I CCNGG 6 cut(s) 33, 102, 283, 363, 495, 630
Bme18I GGWCC 5 cut(s) 35, 148, 365, 374, 518
BmgT120I GGNCC 5 cut(s) 35, 148, 365, 374, 518
BmiI GGNNCC 4 cut(s) 150, 375, 847, 927
BmrFI CCNGG 6 cut(s) 33, 102, 283, 363, 495, 630
BmsI GCATC 3 cut(s) 468, 483, 540
BpiI GAAGAC 2 cut(s) 114, 799
BpmI CTGGAG 4 cut(s) 84, 225, 314, 615
Bpu14I TTCGAA 1 cut(s) 917
BpuEI CTTGAG 1 cut(s) 117
BsaI GGTCTC 1 cut(s) 950
BsaJI CCNNGG 5 cut(s) 101, 281, 628, 688, 841
BsaXI ACNNNNNCTCC 4 cut(s) 181, 211, 287, 317
Bsc4I CCNNNNNNNGG 5 cut(s) 287, 353, 527, 629, 825
Bse118I RCCGGY 1 cut(s) 392
Bse1I ACTGG 2 cut(s) 499, 793
Bse21I CCTNAGG 1 cut(s) 369
Bse3DI GCAATG 2 cut(s) 750, 778
BseBI CCWGG 6 cut(s) 33, 102, 283, 363, 495, 630
BseDI CCNNGG 5 cut(s) 101, 281, 628, 688, 841
BseGI GGATG 4 cut(s) 120, 256, 347, 852
BseLI CCNNNNNNNGG 5 cut(s) 287, 353, 527, 629, 825
BseMI GCAATG 2 cut(s) 750, 778
BseMII CTCAG 2 cut(s) 22, 383
BseNI ACTGG 2 cut(s) 499, 793
BseXI GCAGC 3 cut(s) 251, 256, 376
BseYI CCCAGC 2 cut(s) 647, 727
Bsh1236I CGCG 1 cut(s) 858
BshFI GGCC 6 cut(s) 334, 346, 443, 498, 864, 910
BshNI GGYRCC 1 cut(s) 845
BsiSI CCGG 2 cut(s) 200, 393
BslFI GGGAC 2 cut(s) 387, 744
BslI CCNNNNNNNGG 5 cut(s) 287, 353, 527, 629, 825
BsmAI GTCTC 2 cut(s) 676, 950
BsmFI GGGAC 2 cut(s) 387, 744
BsnI GGCC 6 cut(s) 334, 346, 443, 498, 864, 910
Bso31I GGTCTC 1 cut(s) 950
Bsp119I TTCGAA 1 cut(s) 917
Bsp1286I GDGCHC 2 cut(s) 282, 655
Bsp143I GATC 6 cut(s) 4, 80, 579, 613, 925, 948
BspACI CCGC 3 cut(s) 539, 756, 856
BspANI GGCC 6 cut(s) 334, 346, 443, 498, 864, 910
BspCNI CTCAG 2 cut(s) 21, 382
BspFNI CGCG 1 cut(s) 858
BspLI GGNNCC 4 cut(s) 150, 375, 847, 927
BspMAI CTGCAG 1 cut(s) 241
BspPI GGATC 6 cut(s) 12, 88, 587, 608, 920, 933
BspQI GCTCTTC 1 cut(s) 270
BspT104I TTCGAA 1 cut(s) 917
BspT107I GGYRCC 1 cut(s) 845
BspTNI GGTCTC 1 cut(s) 950
BsrDI GCAATG 2 cut(s) 750, 778
BsrFI RCCGGY 1 cut(s) 392
BsrI ACTGG 2 cut(s) 499, 793
BssAI RCCGGY 1 cut(s) 392
BssECI CCNNGG 5 cut(s) 101, 281, 628, 688, 841
BssMI GATC 6 cut(s) 4, 80, 579, 613, 925, 948
BssT1I CCWWGG 1 cut(s) 688
Bst2UI CCWGG 6 cut(s) 33, 102, 283, 363, 495, 630
Bst4CI ACNGT 6 cut(s) 113, 378, 386, 482, 668, 842
Bst6I CTCTTC 1 cut(s) 270
BstBI TTCGAA 1 cut(s) 917
BstC8I GCNNGC 4 cut(s) 394, 445, 457, 912
BstDEI CTNAG 3 cut(s) 8, 369, 734
BstDSI CCRYGG 1 cut(s) 841
BstF5I GGATG 4 cut(s) 120, 256, 347, 852
BstFNI CGCG 1 cut(s) 858
BstH2I RGCGCY 1 cut(s) 399
BstHHI GCGC 1 cut(s) 398
BstKTI GATC 6 cut(s) 7, 83, 582, 616, 928, 951
BstMAI GTCTC 2 cut(s) 676, 950
BstMBI GATC 6 cut(s) 4, 80, 579, 613, 925, 948
BstMWI GCNNNNNNNGC 3 cut(s) 395, 404, 777
BstNI CCWGG 6 cut(s) 33, 102, 283, 363, 495, 630
BstSCI CCNGG 6 cut(s) 31, 100, 281, 361, 493, 628
BstSFI CTRYAG 1 cut(s) 237
BstUI CGCG 1 cut(s) 858
BstV1I GCAGC 3 cut(s) 251, 256, 376
BstV2I GAAGAC 2 cut(s) 114, 799
BstX2I RGATCY 3 cut(s) 4, 80, 925
BstXI CCANNNNNNTGG 2 cut(s) 342, 501
BstYI RGATCY 3 cut(s) 4, 80, 925
Bsu36I CCTNAGG 1 cut(s) 369
BsuRI GGCC 6 cut(s) 334, 346, 443, 498, 864, 910
BtgI CCRYGG 1 cut(s) 841
BtsCI GGATG 4 cut(s) 120, 256, 347, 852
BtsIMutI CAGTG 3 cut(s) 118, 475, 506
Cac8I GCNNGC 4 cut(s) 394, 445, 457, 912
CaiI CAGNNNCTG 1 cut(s) 38
CfoI GCGC 1 cut(s) 398
Cfr10I RCCGGY 1 cut(s) 392
Cfr13I GGNCC 5 cut(s) 35, 148, 365, 374, 518
Csp6I GTAC 4 cut(s) 234, 304, 379, 669
CspCI CAANNNNNGTGG 2 cut(s) 451, 486
CviAII CATG 4 cut(s) 490, 679, 797, 922
CviQI GTAC 4 cut(s) 234, 304, 379, 669
DdeI CTNAG 3 cut(s) 8, 369, 734
DpnI GATC 6 cut(s) 6, 82, 581, 615, 927, 950
DpnII GATC 6 cut(s) 4, 80, 579, 613, 925, 948
DrdI GACNNNNNNGTC 1 cut(s) 116
DseDI GACNNNNNNGTC 1 cut(s) 116
EaeI YGGCCR 3 cut(s) 332, 344, 862
Eam1104I CTCTTC 1 cut(s) 270
EarI CTCTTC 1 cut(s) 270
Eco130I CCWWGG 1 cut(s) 688
Eco147I AGGCCT 2 cut(s) 443, 910
Eco24I GRGCYC 2 cut(s) 282, 655
Eco31I GGTCTC 1 cut(s) 950
Eco47I GGWCC 5 cut(s) 35, 148, 365, 374, 518
Eco57I CTGAAG 2 cut(s) 294, 507
Eco81I CCTNAGG 1 cut(s) 369
EcoO109I RGGNCCY 2 cut(s) 35, 148
EcoRII CCWGG 6 cut(s) 31, 100, 281, 361, 493, 628
EcoT14I CCWWGG 1 cut(s) 688
EcoT38I GRGCYC 2 cut(s) 282, 655
ErhI CCWWGG 1 cut(s) 688
FaeI CATG 4 cut(s) 493, 682, 800, 925
FalI AAGNNNNNCTT 2 cut(s) 431, 463
FaqI GGGAC 2 cut(s) 387, 744
FatI CATG 4 cut(s) 489, 678, 796, 921
FauI CCCGC 1 cut(s) 532
FauNDI CATATG 2 cut(s) 760, 931
Fnu4HI GCNGC 4 cut(s) 240, 270, 390, 756
FokI GGATG 4 cut(s) 107, 243, 354, 839
FriOI GRGCYC 2 cut(s) 282, 655
Fsp4HI GCNGC 4 cut(s) 240, 270, 390, 756
FspBI CTAG 1 cut(s) 84
GlaI GCGC 1 cut(s) 397
GluI GCNGC 4 cut(s) 240, 270, 390, 756
GsaI CCCAGC 2 cut(s) 651, 731
GsuI CTGGAG 4 cut(s) 84, 225, 314, 615
HaeII RGCGCY 1 cut(s) 399
HaeIII GGCC 6 cut(s) 334, 346, 443, 498, 864, 910
HapII CCGG 2 cut(s) 200, 393
HhaI GCGC 1 cut(s) 398
Hin1II CATG 4 cut(s) 493, 682, 800, 925
Hin6I GCGC 1 cut(s) 396
HinP1I GCGC 1 cut(s) 396
HinfI GANTC 2 cut(s) 25, 428
HpaII CCGG 2 cut(s) 200, 393
HphI GGTGA 4 cut(s) 494, 554, 644, 949
Hpy166II GTNNAC 1 cut(s) 306
Hpy188I TCNGA 1 cut(s) 11
Hpy188III TCNNGA 3 cut(s) 260, 293, 709
Hpy8I GTNNAC 1 cut(s) 306
HpyAV CCTTC 5 cut(s) 15, 531, 761, 829, 875
HpyCH4III ACNGT 6 cut(s) 113, 378, 386, 482, 668, 842
HpyCH4V TGCA 4 cut(s) 239, 316, 455, 836
HpyF10VI GCNNNNNNNGC 3 cut(s) 395, 404, 777
HpyF3I CTNAG 3 cut(s) 8, 369, 734
Hsp92II CATG 4 cut(s) 493, 682, 800, 925
HspAI GCGC 1 cut(s) 396
KroI GCCGGC 1 cut(s) 392
KroNI GCCGGC 1 cut(s) 394
Kzo9I GATC 6 cut(s) 4, 80, 579, 613, 925, 948
LguI GCTCTTC 1 cut(s) 270
LmnI GCTCC 3 cut(s) 103, 295, 644
Lsp1109I GCAGC 3 cut(s) 251, 256, 376
LweI GCATC 3 cut(s) 468, 483, 540
MaeI CTAG 1 cut(s) 84
MaeIII GTNAC 4 cut(s) 40, 416, 866, 937
MalI GATC 6 cut(s) 6, 82, 581, 615, 927, 950
MboI GATC 6 cut(s) 4, 80, 579, 613, 925, 948
MboII GAAGA 3 cut(s) 119, 287, 804
MfeI CAATTG 3 cut(s) 328, 348, 717
MflI RGATCY 3 cut(s) 4, 80, 925
MhlI GDGCHC 2 cut(s) 282, 655
MlsI TGGCCA 2 cut(s) 334, 346
MluCI AATT 6 cut(s) 213, 328, 348, 548, 661, 717
MluNI TGGCCA 2 cut(s) 334, 346
MlyI GAGTC 1 cut(s) 19
MmeI TCCRAC 1 cut(s) 242
MnlI CCTC 9 cut(s) 61, 141, 155, 378, 570, 686, 859, 892, 900
Mox20I TGGCCA 2 cut(s) 334, 346
MroNI GCCGGC 1 cut(s) 392
MroXI GAANNNNTTC 1 cut(s) 213
MscI TGGCCA 2 cut(s) 334, 346
MslI CAYNNNNRTG 2 cut(s) 261, 340
Msp20I TGGCCA 2 cut(s) 334, 346
MspI CCGG 2 cut(s) 200, 393
MspR9I CCNGG 6 cut(s) 33, 102, 283, 363, 495, 630
MunI CAATTG 3 cut(s) 328, 348, 717
MvaI CCWGG 6 cut(s) 33, 102, 283, 363, 495, 630
MvnI CGCG 1 cut(s) 858
MwoI GCNNNNNNNGC 3 cut(s) 395, 404, 777
NaeI GCCGGC 1 cut(s) 394
NdeI CATATG 2 cut(s) 760, 931
NdeII GATC 6 cut(s) 4, 80, 579, 613, 925, 948
NgoMIV GCCGGC 1 cut(s) 392
NlaIII CATG 4 cut(s) 493, 682, 800, 925
NlaIV GGNNCC 4 cut(s) 150, 375, 847, 927
NmeAIII GCCGAG 1 cut(s) 979
NmuCI GTSAC 3 cut(s) 416, 866, 937
NspV TTCGAA 1 cut(s) 917
PceI AGGCCT 2 cut(s) 443, 910
PciSI GCTCTTC 1 cut(s) 270
PdiI GCCGGC 1 cut(s) 394
PdmI GAANNNNTTC 1 cut(s) 213
PfeI GAWTC 1 cut(s) 428
PflMI CCANNNNNTGG 2 cut(s) 353, 629
PkrI GCNGC 4 cut(s) 241, 271, 391, 757
PleI GAGTC 1 cut(s) 19
PpsI GAGTC 1 cut(s) 19
PpuMI RGGWCCY 2 cut(s) 35, 148
Psp5II RGGWCCY 2 cut(s) 35, 148
Psp6I CCWGG 6 cut(s) 31, 100, 281, 361, 493, 628
PspFI CCCAGC 2 cut(s) 647, 727
PspGI CCWGG 6 cut(s) 31, 100, 281, 361, 493, 628
PspN4I GGNNCC 4 cut(s) 150, 375, 847, 927
PspPI GGNCC 5 cut(s) 35, 148, 365, 374, 518
PspPPI RGGWCCY 2 cut(s) 35, 148
PstI CTGCAG 1 cut(s) 241
PstNI CAGNNNCTG 1 cut(s) 38
PsuI RGATCY 3 cut(s) 4, 80, 925
RsaI GTAC 4 cut(s) 235, 305, 380, 670
RsaNI GTAC 4 cut(s) 234, 304, 379, 669
RseI CAYNNNNRTG 2 cut(s) 261, 340
SapI GCTCTTC 1 cut(s) 270
SatI GCNGC 4 cut(s) 240, 270, 390, 756
Sau3AI GATC 6 cut(s) 4, 80, 579, 613, 925, 948
Sau96I GGNCC 5 cut(s) 35, 148, 365, 374, 518
SchI GAGTC 1 cut(s) 19
ScrFI CCNGG 6 cut(s) 33, 102, 283, 363, 495, 630
SduI GDGCHC 2 cut(s) 282, 655
SetI ASST 8 cut(s) 40, 94, 100, 311, 649, 729, 808, 821
SfaNI GCATC 3 cut(s) 468, 483, 540
SfcI CTRYAG 1 cut(s) 237
SfuI TTCGAA 1 cut(s) 917
SinI GGWCC 5 cut(s) 35, 148, 365, 374, 518
SmiMI CAYNNNNRTG 2 cut(s) 261, 340
SmlI CTYRAG 1 cut(s) 132
SmoI CTYRAG 1 cut(s) 132
Sse9I AATT 6 cut(s) 213, 328, 348, 548, 661, 717
SseBI AGGCCT 2 cut(s) 443, 910
SsiI CCGC 3 cut(s) 539, 756, 856
SspMI CTAG 1 cut(s) 84
StuI AGGCCT 2 cut(s) 443, 910
StyD4I CCNGG 6 cut(s) 31, 100, 281, 361, 493, 628
StyI CCWWGG 1 cut(s) 688
TaaI ACNGT 6 cut(s) 113, 378, 386, 482, 668, 842
TaqI TCGA 1 cut(s) 917
TasI AATT 6 cut(s) 213, 328, 348, 548, 661, 717
TatI WGTACW 2 cut(s) 233, 303
TauI GCSGC 1 cut(s) 758
TfiI GAWTC 1 cut(s) 428
TscAI CASTG 3 cut(s) 118, 475, 506
TseFI GTSAC 3 cut(s) 416, 866, 937
TseI GCWGC 3 cut(s) 239, 269, 389
Tsp45I GTSAC 3 cut(s) 416, 866, 937
TspDTI ATGAA 4 cut(s) 561, 714, 789, 813
TspGWI ACGGA 1 cut(s) 657
TspRI CASTG 3 cut(s) 118, 475, 506
Van91I CCANNNNNTGG 2 cut(s) 353, 629
VpaK11BI GGWCC 5 cut(s) 35, 148, 365, 374, 518
XmnI GAANNNNTTC 1 cut(s) 213
XspI CTAG 1 cut(s) 84
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.