Prupe.1G459000_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001092
Physical Location & Seq
Reverse (-)
38429955 .. 38441443
11489 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G459000.13

Sequence Viewer

Length: 8655 bp
ATGGACAAGAACAAGAGCCGTACCGATCTGCTCGCTGCCGGACGAAAAAAGCTTCAACAATATCGTCAGAAGAAAGATAGTAAAGGCAGTGGAAGCCATGGAAAATCCTCAAAGAAGTCTGGTCAATCGGATCAGAATGAAGCTGATGCTGATGCAGTCTCTAGTGCCACTAAATATACAGCATTGCCTCAGGCCCCTGAAGGAGAAACTGAGTCTCCTGTAGACGCTAATCTGAATATCAACTCATCAGGGTCACATTCTGGGGAGAAATCTACTGCTTCTGAGACTGCTGCTGGTCCCTCAGTGATGCCCATTACACATGAGACAAGGGTAGTTGAAACTCCGATCGACCAAAATGCTGAGTCACCATCACAGGAGGTGGAGGTCACTAAGCATGATGTTGAATTTTCTGTCAGGAGTGAGGGGGAGAATACTGGGACCGCTGATGCTGAGGTGGCAAGGGTTATTTCTTCGGACACATTACATGTTGTTGATTCTGGAGGGCAAGCCAAAGATGCCAATATGTCTATACCAGTTGATGTGTCAGCGCAACCTGCTTCAGTTGATGTTGCTGCGGGGATGCGTGTTACTGTTGACACAGAGAGTCTGAGTAGAGAAGAGGAGTCATTGCCTTCACAGGATAATATTAATACAGTGTTGATGCTGCAGAGGGAAGATCAGGTAACCGATGTAGGGGCAATGCAGGAAGCTGATGGTTTGGATGCAAAGAAATATAATCATAGACATGAAGCAGAAGTGGAGCTTAAAGGAGATAACATGCTTTCTTCATCTGAGCTTGATAGAAGCGTTGAAAGTTTCTCAGGTGAAGCACCCTCTGTAGATGAGCAAATTGGTAAGGTGGATGAAGCATCTGATGGAATTTTAGTATTTGCTTCAGATACAAAGCAATCTGATCCTAGTCGTGAAGCAGAAGTGAAGCTTGAAGGAGATAACATGTTTTCTTCATCTGAGTTTGATAGAAGCGTTGAAAGTTTCTCTGGTGAAGCACCCTCTGTAGATGAGCAAACTGGTAAGGTGGATGAAGCATCTGATGGAATGTTAGTATTTGCTTCAGATACAAAGCAATCTGATCCTAGTCGTGAGGCAGAAGTGAAGCTTGAAGGTGATAAAATTCTTTCTCTGTCTGAGATTGATAGAACTGCTGAAGCTCTCACCAACCTAGCTTCCTCTGTAGATGGGCAAACTGGTAAGGCAGATGAAGCATCTGTGCCAGCTGGAGCAACCATGTCTGATGGACTCACAGTATCTGCTTCAGCTTTACCCAAGGCAGATGGATCTTTACTTGTTAGTGCTGTTGTGCCAACCGAGCAGAAAAGAGAAGATGTTCCAGGTTCTTATTTTGAAGAAAAGTCAGAGGTGCAATTTGGATCTGGTTCTGAGCAAGGTGGGGAAGAACGTAGGGACGTTGCTGAGGATTTTCATCAGAAACATCTGTTGGATGGCTGTGATAGGCCTCCGCAAATCAATGTGGTGAGTCCAGATAAAGGATGGACTGCGTCTCCTGTTGCAGATGTCAGCTCAATCAGTCTCTCACAGCTCACAGAAGTAATTAGGAGGCTTAATGAAGAAGAGTTCCGGATTCTTCTTAAGTCAATCGAATCAGTTTCTAACTCATTTCCAGGGACTACCAATTCGATTGGGCCAGAATATGGATTTCCGGAATCATTTGAGCGACTTAAAGAAGAATTGATTCTCACAAATTTCACAAAAGATATCTTTCACTTGCAGTTTGCACAGCAGTCTGAGATGCAAGTGGAGTTTGACTGCCAGCGTAATCAGTTGCTTGATGAAACATCTCTTCTTCGTGCTTCACTCAATGAAGTTCGTGAGAAGAACCAATACCTTGCTGAAGAGCTTGCAGAGTGCAGATGTGAACTCCAGCATGTTGCTAGTGGAAAGGAGGAGCTCCAAAACCAATTTCAAACTGTGAAGGCAGAGGCTGAAGAATTTTCTGCTAGAGCAATTGAGTTGCATAGCAGCCTGGAAAGGTCACAGCAGGATATGTCGAGACTGTCAGAAGAGTTGGCTGACTGCAAGTCTTTGGTGGCAGCCTTACAGGTGGAAAATGAGAAATTACATGGGACTTTTGCTTCAATGGATGAAGATAGAAAGAAACTAGTTGAGCAAAATGATCTTCATCTACATGAGAAGGAGAAGCTTTCAGCAGACTTAGTTGATTGCAAAAGTTTTATGGCAGATCTACAGGGTCAAATATCCAACTTGAGTGGTAGTCTGGGTTCAGTAACAGAGGAGAGGAAGAAACTCGAGGAGGAGAAGGAACATCTTTCCTCTGAGAATGAGAAACTTGCAATAGAATTGGCTGACAGTAAGAATTTAGTATTGGCTTTGCAGGTAGAAAATGGAAATTTGAATGTGAGTCTTGGTTTAGTTACAGTGGAGAGAAAGAAGCTCGAGGAAGAGAAGGAGTTTTCTGCTCATGAGATTGAGAGACTTTCTTCCGAACTTCTTGTTCTTCAAGAGCGGTTATCTGCAGAACATGGAGAACATATGAGGGTTGTGATTGACTTAAAAGAAACGACAACACGCCTTGAACAACTCACCGAAGAAAATATTTTTCTTACTAGCAGTCTGGACATACTTAAAGCCAAGATGAGAGAGATTGATGAGGATGGAATCAAAATACCAGCTCAAGCTGGGGAAGCTGAGAATCAAGTTGAACTCTCAGAAGTGCAGAGCAGGGGTCATGAAACTGCAACCGAAAGTGAAAATTTTCATCAAGTTCCAGGAAAGGAAGATAGTGAAGTTTCCTTTATTATGGTGGAAAAACCTTTTTCTGATGGCTGTGTAGGAGGCTCACCATTTCTGAATCTTGGGTGTGAAATCTTTGATGATTCCTTCGGGTTTGTAGCACTAAAGGGACGCTTGGAGGAGGCAAATAAAATGTTGAATAAACTTGTACCGGAAATTGAAGGCATCTGCTCTCATTCAGAATCCTTGAACAGGTCAGATGGTAAAGTTTCCGCACCTCCAGTGTCAAAACTGATTCAAGCCTTCGAGTCAAAGGCGCATCTTGAAGAACTTGATGTTGAGGAACGAGGTCTAACTAACAATCAATCACCTGCAGATTCAATTGCATCAGTAAGAGAGCAAACTGGAAACTTGAGAGCATTATTTGAGCAGTTGCATCTGGATGCTGCAAATGCCAGTGTGCTGCTCAAGGAGGAACGAGAGGGTAGGAAAACTGCTAATGCCGCGTTTGGGGAGCTGAAGGATCAGTATGAAGCCTTGGAGGAACATAGCAAAAAGCTGGAAGCAACCAACATCGAGCTTGGTGTCCTATATGAAGCTTTAGAACAACATAGGGGCAGCATTGAAACAAGGAATAGCGAACTTGTGGTTCTCTGTGAGTCCTTACAACTACAAGTTACTAATCTCGAAGCAGAAAACGTGGAAGTTGGTAGAAAGCTACATGGGTATGAATCAAGAATTAGTCAATTGCAGAGTCGATTGCATGATTTACATACAAGTTCAAATGACATGGTATCTCAGATCTCTGATCAGTTAGAAAATTTTCACAAGGAAGCAGCAGAGAGGGTTTTGATACTTGAGCAGCATTGGAATTCCACTATTGCTCCGGTTGTTGAAGCAATTGGAAAACTTGATGAATCTCTTGAGAGTTCCACAACTACACCAGTCTCTCATGATTGTCTGGATACAATTAGCCATTTTGTTTCTTCTGTATATGATGCTGTCAGTGTTATTGAAGATCTAAAGGGGAAACTTCAAAGTTCTCAAATGGACCGTGAGGCTATTTGTACTTTATACAAAGAAGTGAATGAGAAATGTGATGATCTGCATGGAAAGAATGAATTGGCTAGTGATACTCTGTGCAAGTTGTATGACAGCCTTCAAAAACTAATTAGAGTTTTGCATGGGTCTATAGATGAAAGTGAGATGAACCTGGAAAATGAGAAGCTTCCTGATCCTCTGGATTACAGTAATTTTGTAACCATCATAGAGCAGCTGGAGAATTTTCTGAGTGAGAGGCTGCAACTCCAATCTGTTAACAAGAAGATAAACTCAGAGTTGTTGGATAGAACAGAAGAAATTGAGGAGCTAAAACAAAGATGCCTCGATGCAAGTTCTATTCAGAAGTTAATAAAAGATGTTGAAGGTGTGCTAAAAGTGGAACATCCTGAGGTTCACGTAGATAAAATGCCTGCTTCACGCTTAGAATCATTGGTGTCGTGTCTTGTTCGGAAGTACGAGGAGGCTGATGTGCAGGTAGGCTTATCTCAAGAAGGTTTTCAATCTAAGGCAATGGAATTGACTTCAATGCAGGAAGAAATACAGCATTTAAATGCTTTGTGTTTCCAGCGTGAAAGTGAAACCATTGTTGTCAAGGAAAGTTTACGTCATGCAGAGGATGCCCTTCTTGTTGCTCGTTCTGAGTTACAGGAGAAACTAAATGAACTTGAACAATCGGAGCAACGGGTGTCTTCCCTAAGAGAGAAGCTTAGCATTGCTGTCTCTAAGGGGAAAGGCTTGATTGTGCAGCGAGATGGTCTCAAACAGTCTCTTACAGAGAAATCTAGTGAGCTGGAAAGATTCTTGCAGGAGCTGCAATTGAAAGACTCCAGGCTTGTTGAGGTTGAAACAAAACTCAAGGCATATTCAGAGGCAGGTGAGCGTGTGGAAGCTCTGGAATCTGAGCTTTCATACATTCGCAATTCGGCTACTGCATTAAGGGAATCATTCCTTCTCAAAGACTCTGTCCTTCAGAGAATAGAAGAGATTTTGGAGGACCTTGATCTGCCAGAGAATTTTCATTCGAGGGATATTATTGAAAAGATAGATTGGCTGGCTAGGTCAGCTACTGGTAACACTTTTCCTCTGACAGATTCAGATCAGAAGAGTTCTGCTGGTGGAGGTTCATACTCTGATGCTGGTTTTGTTGTTATGGATTCCTGGAAAGATGATGTACAGCCAAACTCAGATTCTAGTGATGATATCAAAAGAAAATATGATGAACTTCAAAGTAAGTTCTATGGGTTGGCTGAACAGAATGAAATGTTGGAACAATCTTTAATGGAGAGGAACAACTTAGTCCAGAGGTGGGAGGAACTTCTGGACAGGTTTGATATGCCACCGCATTTGCGGTCCATGGAGCCCGAGGATAGGATTGAGTGGTTAAGAAAAGCACTTTCGGAGGCAGAGGGTGATAATATATCTCTCCAGCAGAAGGTTGTTAACCTTGAAAACTATTGTGTATCACTAACTGCTGATTTGGAAGACTCAAAAAGGAGAATATCTGACCTTGAGGAAGAACTTCGAACATTTATCGATGAGAGAAATAATCTTTCTCAAAGATGGGAGGTTCTGATCAATGATCATGATAAAATTTCAGCAAAGGCAGGTGAGCTTGAGCTTGAGAATGAAAAACTGCAGGTGGAAGTTACGGATTTGCAGGAGAACATAGCCAAGATGCGTGGGAATGAGGAGCAAATTTTCAGCATAGAAGGTGACATAAGAAGATTGCAGGGTCTTGTTACTGATGCATTGCAGGTTCCTGGATTAAAGTTAGAGTATTCTGGTGAAAGCAGCATTGAGTGCTTTGAAGGGTTACTGAATAAGCTTTTAGAGAATTATGCAACTCTTTCCTTCGAAAAACCAGTGTTTGGGAGTGCAGCTGATGGTACCCACACTGAAATTGCTGAAGCAACGTTTGATCAAGCAAGAAGTGTAAGTACACCTGATACTGCTGAATCAGATATTGCTGTTTTGAAGAAAGAGTTGGAGGAGGTTCAGCGTGAAATTTTGGCTGTGAAGGAGGAGAGAGATGGATATCTGGAGAATCAAGGGTCTTTGGCTTGTGAGGTAGAAGCACTAGATAAAAAAGTGAGTGAGTTGCAAGCACTGCTTAATCAGGAGGAGCAGAAGTCAGTTTCCGTTAGAGATAAGTTAAACATTGCAGTTAGAAAAGGAAAGCAGTTGGTGCAACAGCGTGACAGTCTGAAACAAAATCTTGATGAGATCAATTCTGAGGTGGAACGCTTGAGATCTGAGATCAAGATAGGGGAAGGTAAACTTGCAGAGTATGAAGAGAAGTTCAAGGATTTCTCTGCTTATCCACGGAGGGTAGAAGCTCTAGAGTCTGAGATTTTGTTCTTGCGGAACTGTTTGAAAGAAAGTGAGCACAATTTGCAGGAGAAGGGAAATACTTTGAGCTTGATCTTAAATGTTTTAGGCAACATTGATGTTGGAGATGATGCTAATTCTGGTGATCCTGTTTTGAAGTTGGAACATATTTGGAAAGTGTGCCGTGATTTGCGTGTAGATATGGCTTCTTCAGAACAGGAGGCTAGGAAATCAAAAAGAGCAGCAGAGCTACTCCTTGCAGAACTGAATGAGGTTCAAGAGAGAAATGATGGTCTCCAGGAAGAGCTAGCAAAATCTGCGAGTGAACTTGCTACACTCTCCAAGGAAAGGGATCTCACAGAGGCCGCCAAGCTTGATGCTCTTTCTCGTCTTGAAAAGTTATCTACAGCTCATTCTGAATTTGCGGGATTAAAGTCTGGAGTAGATCAACTCAGGAAGGGGTTCCATGATGTTAGTAATTTACTGGCTGGTGTTTTTCACCAGGACATGGCATTTTTGCACAACCTCGAATCTGGTATTGACTCCTGCCTCAAATCAAGCAGTGCTGCTGATGTGGTTGATGGACCCCTTTTTACAACAACGGGTGGATTTATTATGAGCAAATCAGATAAGGAGAACTTTACTTTGATGAATTCTTGGTCAGACTCCAACATGCATGGCCGTTCGGATGACAATTTTATTGTTGAAATCTTTACTTACGTAAGGCATTATCTGCAAGAACTCATGGTGGAGGTTGGCGCGCTTAAAGAAAAATTAGATGAACACTCAGTTTCATTACATGAAAAAACCAATAACGTATCAAAATTAATTGCAATTGTTCGTGGAGAATTAACTTCCAAAAATGAGTCAGTTGATTCCTTGAAGAGAGACTTATTGCATATGGAAAGAGTTGAAAAAGAAAAAGACAAGGAGCTTCTTCTCTTGCGTAGAAATGTTGGCTTACTTTTTGAAGCATGCACTAGTTCAGTTATGGAAATGGGTAGAAGAAAAACTGAATTGGCTGGAAATGGTTGGGCTGCTGGAGATCAAGGGATGAGATTGAAATCAGCAGAATTTCCCGTCGATGGACTTTCTTTTGGTGGAGAGGAGCAGTTTCACTCTGAGGAATGTGTCAGGACTATGACAGACGGGCTATTGTCGACTGTGAATGATTTTGGTTCTCTGACAGCTGAAATTGTGGAAGGTAACCAAAAGGAATTGAAGATTACCATTTCCAAGTTGCAGAAAGAACTTCAGGAGAAGGACATTCAAAAGGAAAGGATCTGCATGGAGCTTGTAAGTCAAATCAAGGGGGCTGAAGCGGCTGCAACAAGTTATTCAATGGATCTTCAATCCTCAAAAACGTTGGTGCATGATTTGGAAAAACAGGTGGAAGTGATTAAGGGTGAACGTAACCTATTGGAGCAGAGAGTGAAAAAGCTAGAAGATGGTCGTGCCACTTGTACCGATTTACAAGAGAGGGTCAGATCACTGACTGATGTGATTGCTGCCAAAGACCAAGAGATTGAGGACCTAATGCAAGCACTTGATGATGAGGAGGTGCAAATGCAAGGTCTCACTTTCAAGATTAAGGAATTGGAAAAGGTTGTGGAACAAAAGAACCTAGATCTTGAGAACCTTGAAGCTTCTCGCGGGAAGGTTATGAAAAAGCTTTCCGTCACTGTGAGTAAGTTTGATGAGCTACATCATCTATCTGCAAACCTCCTTGCTGAGGTGGAAAAGCTCCAATCACAATTGCAAGATCGGGATGCTGAGATATCTTTCTTAAGGCAAGAGGTCACTAGGTGCACCAATGATGTTCTTGTTGCATCTCAAACCAGCAACAAAAGAAATTCAGATGAGATCCTTGAGTTATTAACATGGTTTGATATGAATATTGCTCGGGTTGTTGTGCACAACGCATATCTTAGGGAAAAGAACAATGATAATGACTCTGAACATAAGGAAATATTTAAGAAAAAGATTGATTGTATTATATCAGAATTGGAGGATCTACAGGCTGTAGCTCAAAGCAAAGATACGCTATTGCAAGTTGAGAGGAGTAAGGTAGAAGAATTAACACGGAAGGGAGAAAGTCTTGAGAAGTCTTTACATGAGAAAGAATCACAACTAAATTTGCTTGAAGGTGTTGGAGATTCAGGCAGAGGAACTAGTATGACCTCTGAAATTATCGAGGTTGAACCTGCGAAAAACAACTGGGCGGTATCTGGGTCCTCCATTGCACCTCAAGTCCGCAGTTTGCGCAAAGGCAATAGTGACCAAGTTGCAATTGCGATAGATATGGATTCTGAGAAGACTAGTAGGTTAGACGATGAAGAGGATGATAAAGTTCATGGTTTCAAGTCACTCACTACATCAAGAATTGTTCCAAGATTTACAAGACCTGTGACTGACATGGTCGATGGCCTTTGGGTTTCTTGTGAGCGGACTCTAATGCGGCAACCTGCTTTACGGCTTGGCATTATACTCTATTGGTTTATACTGCATGCGCTTGTTGCTACTTTTGCAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2885

Amino Acids

322.21

Weight (kDa)

4.72

Isoelectric Point (pI)

49.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 4 cut(s) 3109, 4655, 5387, 5419
Acc16I TGCGCA 1 cut(s) 8384
Acc65I GGTACC 1 cut(s) 5678
AccB1I GGYRCC 1 cut(s) 5678
AccB7I CCANNNNNTGG 3 cut(s) 1670, 5660, 6628
AccBSI CCGCTC 2 cut(s) 2503, 8566
AccI GTMKAC 2 cut(s) 222, 7280
AccII CGCG 3 cut(s) 3236, 6881, 7773
AccIII TCCGGA 2 cut(s) 1596, 1678
AclI AACGTT 2 cut(s) 5705, 7484
AcoI YGGCCR 1 cut(s) 6799
AdeI CACNNNGTG 1 cut(s) 7926
AfaI GTAC 8 cut(s) 22, 2940, 3799, 4247, 4965, 5680, 5731, 7585
AflII CTTAAG 2 cut(s) 1607, 7906
AflIII ACRYGT 2 cut(s) 484, 954
AhdI GACNNNNNGTC 1 cut(s) 2056
AhlI ACTAGT 4 cut(s) 2137, 7100, 8291, 8438
Alw21I GWGCWC 4 cut(s) 1929, 6180, 7931, 8037
Alw44I GTGCAC 2 cut(s) 7927, 8033
AlwNI CAGNNNCTG 4 cut(s) 1268, 1961, 4603, 4859
Ama87I CYCGRG 4 cut(s) 2285, 2432, 5153, 8022
Aor13HI TCCGGA 2 cut(s) 1596, 1678
AoxI GGCC 6 cut(s) 192, 1472, 1661, 6483, 6799, 8545
ApaLI GTGCAC 2 cut(s) 7927, 8033
ArsI GACNNNNNNTTYG 6 cut(s) 1636, 1668, 4740, 4772, 7678, 7710
AseI ATTAAT 2 cut(s) 648, 6947
Asp700I GAANNNNTTC 7 cut(s) 1344, 1710, 2751, 3552, 4287, 5310, 6581
Asp718I GGTACC 1 cut(s) 5678
AspLEI GCGC 6 cut(s) 550, 3049, 6881, 6883, 8385, 8632
AsuII TTCGAA 2 cut(s) 5314, 5646
AsuNHI GCTAGC 1 cut(s) 6427
AvaI CYCGRG 4 cut(s) 2285, 2432, 5153, 8022
AvaII GGWCC 8 cut(s) 296, 438, 3781, 4786, 5142, 6704, 7651, 8352
AxyI CCTNAGG 2 cut(s) 189, 4179
BaeGI GKGCMC 2 cut(s) 7931, 8037
BanI GGYRCC 1 cut(s) 5678
BanII GRGCYC 2 cut(s) 1929, 5154
BarI GAAGNNNNNNTAC 4 cut(s) 1844, 1876, 5713, 5745
BbsI GAAGAC 3 cut(s) 4473, 5280, 8441
Bbv12I GWGCWC 4 cut(s) 1929, 6180, 7931, 8037
BbvCI CCTCAGC 3 cut(s) 450, 1431, 7851
BceAI ACGGC 4 cut(s) 3, 6288, 6786, 8609
BcgI CGANNNNNNTGC 2 cut(s) 338, 372
BciVI GTATCC 1 cut(s) 3688
BclI TGATCA 4 cut(s) 3538, 5364, 5371, 5710
BcuI ACTAGT 4 cut(s) 2137, 7100, 8291, 8438
BfrI CTTAAG 2 cut(s) 1607, 7906
BfuI GTATCC 1 cut(s) 3688
BglII AGATCT 5 cut(s) 2218, 3531, 3748, 6041, 7747
BlpI GCTNAGC 1 cut(s) 4499
Bme18I GGWCC 8 cut(s) 296, 438, 3781, 4786, 5142, 6704, 7651, 8352
BmeRI GACNNNNNGTC 1 cut(s) 2056
BmeT110I CYCGRG 4 cut(s) 2285, 2432, 5153, 8022
BmiI GGNNCC 9 cut(s) 195, 298, 439, 5151, 5550, 5680, 6584, 6706, 8353
BmrI ACTGGG 2 cut(s) 444, 8347
BmtI GCTAGC 1 cut(s) 6431
BmuI ACTGGG 2 cut(s) 444, 8347
BpiI GAAGAC 3 cut(s) 4473, 5280, 8441
BplI GAGNNNNNCTC 2 cut(s) 4533, 4565
Bpu10I CCTNAGC 3 cut(s) 450, 1431, 7851
Bpu1102I GCTNAGC 1 cut(s) 4499
Bpu14I TTCGAA 2 cut(s) 5314, 5646
Bsa29I ATCGAT 1 cut(s) 5325
BsaAI YACGTR 2 cut(s) 4189, 6841
BsaBI GATNNNNATC 5 cut(s) 1440, 2157, 4887, 5826, 7183
BsaI GGTCTC 3 cut(s) 4553, 6419, 7700
BsaJI CCNNGG 8 cut(s) 97, 1284, 1640, 3267, 5145, 5154, 6113, 6462
BsaWI WCCGGW 4 cut(s) 1596, 1678, 2941, 3616
BsaXI ACNNNNNCTCC 8 cut(s) 199, 229, 1504, 1534, 3598, 3628, 5906, 5936
Bse21I CCTNAGG 2 cut(s) 189, 4179
Bse3DI GCAATG 8 cut(s) 182, 626, 705, 4308, 4503, 5540, 5949, 8358
Bse8I GATNNNNATC 5 cut(s) 1440, 2157, 4887, 5826, 7183
BseAI TCCGGA 2 cut(s) 1596, 1678
BseCI ATCGAT 1 cut(s) 5325
BseDI CCNNGG 8 cut(s) 97, 1284, 1640, 3267, 5145, 5154, 6113, 6462
BseJI GATNNNNATC 5 cut(s) 1440, 2157, 4887, 5826, 7183
BseMI GCAATG 8 cut(s) 182, 626, 705, 4308, 4503, 5540, 5949, 8358
BsePI GCGCGC 1 cut(s) 6879
BseSI GKGCMC 2 cut(s) 7931, 8037
BseYI CCCAGC 1 cut(s) 2675
BsgI GTGCAG 5 cut(s) 1906, 2732, 4283, 4556, 5688
Bsh1236I CGCG 3 cut(s) 3236, 6881, 7773
Bsh1285I CGRYCG 1 cut(s) 348
BshFI GGCC 6 cut(s) 194, 1474, 1663, 6485, 6801, 8547
BshNI GGYRCC 1 cut(s) 5678
BshVI ATCGAT 1 cut(s) 5325
BsiEI CGRYCG 1 cut(s) 348
BsiHKAI GWGCWC 4 cut(s) 1929, 6180, 7931, 8037
BsiHKCI CYCGRG 4 cut(s) 2285, 2432, 5153, 8022
BsiSI CCGG 5 cut(s) 39, 1597, 1679, 2942, 3617
BslFI GGGAC 6 cut(s) 282, 451, 1436, 1657, 2116, 2913
BsmBI CGTCTC 1 cut(s) 1524
BsmFI GGGAC 6 cut(s) 282, 451, 1436, 1657, 2116, 2913
BsnI GGCC 6 cut(s) 194, 1474, 1663, 6485, 6801, 8547
Bso31I GGTCTC 3 cut(s) 4553, 6419, 7700
BsoBI CYCGRG 4 cut(s) 2285, 2432, 5153, 8022
Bsp119I TTCGAA 2 cut(s) 5314, 5646
Bsp1286I GDGCHC 5 cut(s) 1929, 5154, 6180, 7931, 8037
Bsp13I TCCGGA 2 cut(s) 1596, 1678
Bsp1407I TGTACA 1 cut(s) 4963
Bsp1720I GCTNAGC 1 cut(s) 4499
Bsp19I CCATGG 2 cut(s) 97, 5145
BspANI GGCC 6 cut(s) 194, 1474, 1663, 6485, 6801, 8547
BspDI ATCGAT 1 cut(s) 5325
BspEI TCCGGA 2 cut(s) 1596, 1678
BspFNI CGCG 3 cut(s) 3236, 6881, 7773
BspHI TCATGA 4 cut(s) 2458, 2725, 3682, 5374
BspLI GGNNCC 9 cut(s) 195, 298, 439, 5151, 5550, 5680, 6584, 6706, 8353
BspMAI CTGCAG 4 cut(s) 669, 2515, 3106, 5430
BspOI GCTAGC 1 cut(s) 6431
BspQI GCTCTTC 2 cut(s) 1866, 6417
BspT104I TTCGAA 2 cut(s) 5314, 5646
BspT107I GGYRCC 1 cut(s) 5678
BspTI CTTAAG 2 cut(s) 1607, 7906
BspTNI GGTCTC 3 cut(s) 4553, 6419, 7700
BsrBI CCGCTC 2 cut(s) 2503, 8566
BsrDI GCAATG 8 cut(s) 182, 626, 705, 4308, 4503, 5540, 5949, 8358
BsrGI TGTACA 1 cut(s) 4963
BssECI CCNNGG 8 cut(s) 97, 1284, 1640, 3267, 5145, 5154, 6113, 6462
BssHII GCGCGC 1 cut(s) 6879
BssT1I CCWWGG 5 cut(s) 97, 1284, 3267, 5145, 6462
BstAFI CTTAAG 2 cut(s) 1607, 7906
BstAPI GCANNNNNTGC 8 cut(s) 4409, 4603, 5592, 5899, 5977, 6184, 6437, 6853
BstAUI TGTACA 1 cut(s) 4963
BstBAI YACGTR 2 cut(s) 4189, 6841
BstBI TTCGAA 2 cut(s) 5314, 5646
BstDSI CCRYGG 3 cut(s) 97, 5145, 6113
BstEII GGTNACC 2 cut(s) 682, 7325
BstENI CCTNNNNNAGG 2 cut(s) 2980, 7850
BstFNI CGCG 3 cut(s) 3236, 6881, 7773
BstHHI GCGC 6 cut(s) 550, 3049, 6881, 6883, 8385, 8632
BstMCI CGRYCG 1 cut(s) 348
BstNSI RCATGY 7 cut(s) 488, 781, 958, 1907, 6796, 7098, 8630
BstPI GGTNACC 2 cut(s) 682, 7325
BstSLI GKGCMC 2 cut(s) 7931, 8037
BstSNI TACGTA 1 cut(s) 6841
BstUI CGCG 3 cut(s) 3236, 6881, 7773
BstV2I GAAGAC 3 cut(s) 4473, 5280, 8441
Bsu15I ATCGAT 1 cut(s) 5325
Bsu36I CCTNAGG 2 cut(s) 189, 4179
BsuI GTATCC 1 cut(s) 3688
BsuRI GGCC 6 cut(s) 194, 1474, 1663, 6485, 6801, 8547
BsuTUI ATCGAT 1 cut(s) 5325
BtgI CCRYGG 3 cut(s) 97, 5145, 6113
BtsI GCAGTG 3 cut(s) 94, 5897, 6688
CaiI CAGNNNCTG 4 cut(s) 1268, 1961, 4603, 4859
CciI TCATGA 4 cut(s) 2458, 2725, 3682, 5374
CfoI GCGC 6 cut(s) 550, 3049, 6881, 6883, 8385, 8632
ClaI ATCGAT 1 cut(s) 5325
CseI GACGC 3 cut(s) 233, 1506, 2910
Csp6I GTAC 8 cut(s) 21, 2939, 3798, 4246, 4964, 5679, 5730, 7584
CspCI CAANNNNNGTGG 6 cut(s) 2227, 2262, 5118, 5153, 5452, 5487
CviQI GTAC 8 cut(s) 21, 2939, 3798, 4246, 4964, 5679, 5730, 7584
DraI TTTAAA 1 cut(s) 4341
DraIII CACNNNGTG 1 cut(s) 7926
DriI GACNNNNNGTC 1 cut(s) 2056
EaeI YGGCCR 1 cut(s) 6799
Eam1105I GACNNNNNGTC 1 cut(s) 2056
Ecl136II GAGCTC 1 cut(s) 1927
Eco105I TACGTA 1 cut(s) 6841
Eco130I CCWWGG 5 cut(s) 97, 1284, 3267, 5145, 6462
Eco147I AGGCCT 1 cut(s) 1474
Eco24I GRGCYC 2 cut(s) 1929, 5154
Eco31I GGTCTC 3 cut(s) 4553, 6419, 7700
Eco32I GATATC 4 cut(s) 1735, 4993, 5828, 7899
Eco47I GGWCC 8 cut(s) 296, 438, 3781, 4786, 5142, 6704, 7651, 8352
Eco53kI GAGCTC 1 cut(s) 1927
Eco81I CCTNAGG 2 cut(s) 189, 4179
Eco88I CYCGRG 4 cut(s) 2285, 2432, 5153, 8022
Eco91I GGTNACC 2 cut(s) 682, 7325
EcoICRI GAGCTC 1 cut(s) 1927
EcoNI CCTNNNNNAGG 2 cut(s) 2980, 7850
EcoO109I RGGNCCY 4 cut(s) 193, 4786, 7651, 8352
EcoO65I GGTNACC 2 cut(s) 682, 7325
EcoRI GAATTC 2 cut(s) 3601, 6772
EcoRV GATATC 4 cut(s) 1735, 4993, 5828, 7899
EcoT14I CCWWGG 5 cut(s) 97, 1284, 3267, 5145, 6462
EcoT22I ATGCAT 2 cut(s) 5542, 6798
EcoT38I GRGCYC 2 cut(s) 1929, 5154
ErhI CCWWGG 5 cut(s) 97, 1284, 3267, 5145, 6462
Esp3I CGTCTC 1 cut(s) 1524
FaqI GGGAC 6 cut(s) 282, 451, 1436, 1657, 2116, 2913
FauI CCCGC 3 cut(s) 568, 6538, 7766
FauNDI CATATG 2 cut(s) 2529, 7020
FbaI TGATCA 4 cut(s) 3538, 5364, 5371, 5710
FblI GTMKAC 2 cut(s) 222, 7280
FriOI GRGCYC 2 cut(s) 1929, 5154
FspI TGCGCA 1 cut(s) 8384
GlaI GCGC 6 cut(s) 549, 3048, 6880, 6882, 8384, 8631
GsaI CCCAGC 1 cut(s) 2679
HaeIII GGCC 6 cut(s) 194, 1474, 1663, 6485, 6801, 8547
HapII CCGG 5 cut(s) 39, 1597, 1679, 2942, 3617
HgaI GACGC 3 cut(s) 233, 1506, 2910
HhaI GCGC 6 cut(s) 550, 3049, 6881, 6883, 8385, 8632
Hin6I GCGC 6 cut(s) 548, 3047, 6879, 6881, 8383, 8630
HinP1I GCGC 6 cut(s) 548, 3047, 6879, 6881, 8383, 8630
HincII GTYRAC 4 cut(s) 595, 4048, 5233, 7281
HindII GTYRAC 4 cut(s) 595, 4048, 5233, 7281
HpaI GTTAAC 2 cut(s) 4048, 5233
HpaII CCGG 5 cut(s) 39, 1597, 1679, 2942, 3617
Hpy99I CGWCG 1 cut(s) 7205
HspAI GCGC 6 cut(s) 548, 3047, 6879, 6881, 8383, 8630
Kpn2I TCCGGA 2 cut(s) 1596, 1678
KpnI GGTACC 1 cut(s) 5682
Ksp22I TGATCA 4 cut(s) 3538, 5364, 5371, 5710
KspAI GTTAAC 2 cut(s) 4048, 5233
LguI GCTCTTC 2 cut(s) 1866, 6417
MbiI CCGCTC 2 cut(s) 2503, 8566
MfeI CAATTG 8 cut(s) 1983, 3111, 3476, 3630, 4607, 6954, 7874, 8409
MhlI GDGCHC 5 cut(s) 1929, 5154, 6180, 7931, 8037
MmeI TCCRAC 9 cut(s) 1437, 2262, 4053, 5037, 5757, 6223, 6261, 6813, 8251
Mph1103I ATGCAT 2 cut(s) 5542, 6798
MroI TCCGGA 2 cut(s) 1596, 1678
MroXI GAANNNNTTC 7 cut(s) 1344, 1710, 2751, 3552, 4287, 5310, 6581
MslI CAYNNNNRTG 5 cut(s) 744, 2163, 3171, 3456, 4341
MspA1I CMGCKG 5 cut(s) 443, 1235, 4006, 5672, 7310
MspCI CTTAAG 2 cut(s) 1607, 7906
MspI CCGG 5 cut(s) 39, 1597, 1679, 2942, 3617
MunI CAATTG 8 cut(s) 1983, 3111, 3476, 3630, 4607, 6954, 7874, 8409
MvnI CGCG 3 cut(s) 3236, 6881, 7773
NcoI CCATGG 2 cut(s) 97, 5145
NdeI CATATG 2 cut(s) 2529, 7020
NheI GCTAGC 1 cut(s) 6427
NlaIV GGNNCC 9 cut(s) 195, 298, 439, 5151, 5550, 5680, 6584, 6706, 8353
NsbI TGCGCA 1 cut(s) 8384
NsiI ATGCAT 2 cut(s) 5542, 6798
NspI RCATGY 7 cut(s) 488, 781, 958, 1907, 6796, 7098, 8630
NspV TTCGAA 2 cut(s) 5314, 5646
PaeI GCATGC 2 cut(s) 7098, 8630
PaeR7I CTCGAG 2 cut(s) 2285, 2432
PagI TCATGA 4 cut(s) 2458, 2725, 3682, 5374
PaqCI CACCTGC 4 cut(s) 3109, 4655, 5387, 5419
PauI GCGCGC 1 cut(s) 6879
PceI AGGCCT 1 cut(s) 1474
PciI ACATGT 2 cut(s) 484, 954
PciSI GCTCTTC 2 cut(s) 1866, 6417
PdmI GAANNNNTTC 7 cut(s) 1344, 1710, 2751, 3552, 4287, 5310, 6581
PflFI GACNNNGTC 3 cut(s) 1516, 4754, 8537
PflMI CCANNNNNTGG 3 cut(s) 1670, 5660, 6628
PfoI TCCNGGA 4 cut(s) 2764, 4949, 5551, 6417
Ple19I CGATCG 1 cut(s) 348
Ppu21I YACGTR 2 cut(s) 4189, 6841
PpuMI RGGWCCY 3 cut(s) 4786, 7651, 8352
PscI ACATGT 2 cut(s) 484, 954
PshBI ATTAAT 2 cut(s) 648, 6947
Psp124BI GAGCTC 1 cut(s) 1929
Psp1406I AACGTT 2 cut(s) 5705, 7484
Psp5II RGGWCCY 3 cut(s) 4786, 7651, 8352
PspEI GGTNACC 2 cut(s) 682, 7325
PspFI CCCAGC 1 cut(s) 2675
PspN4I GGNNCC 9 cut(s) 195, 298, 439, 5151, 5550, 5680, 6584, 6706, 8353
PspPPI RGGWCCY 3 cut(s) 4786, 7651, 8352
PspXI VCTCGAGB 2 cut(s) 2285, 2432
PsrI GAACNNNNNNTAC 2 cut(s) 2242, 2274
PstI CTGCAG 4 cut(s) 669, 2515, 3106, 5430
PstNI CAGNNNCTG 4 cut(s) 1268, 1961, 4603, 4859
PsyI GACNNNGTC 3 cut(s) 1516, 4754, 8537
PteI GCGCGC 1 cut(s) 6879
PvuI CGATCG 1 cut(s) 348
PvuII CAGCTG 4 cut(s) 1235, 4006, 5672, 7310
RsaI GTAC 8 cut(s) 22, 2940, 3799, 4247, 4965, 5680, 5731, 7585
RsaNI GTAC 8 cut(s) 21, 2939, 3798, 4246, 4964, 5679, 5730, 7584
RseI CAYNNNNRTG 5 cut(s) 744, 2163, 3171, 3456, 4341
SacI GAGCTC 1 cut(s) 1929
SalI GTCGAC 1 cut(s) 7279
SapI GCTCTTC 2 cut(s) 1866, 6417
SduI GDGCHC 5 cut(s) 1929, 5154, 6180, 7931, 8037
Sfr274I CTCGAG 2 cut(s) 2285, 2432
SfuI TTCGAA 2 cut(s) 5314, 5646
SinI GGWCC 8 cut(s) 296, 438, 3781, 4786, 5142, 6704, 7651, 8352
SlaI CTCGAG 2 cut(s) 2285, 2432
SmiI ATTTAAAT 1 cut(s) 4341
SmiMI CAYNNNNRTG 5 cut(s) 744, 2163, 3171, 3456, 4341
SnaBI TACGTA 1 cut(s) 6841
SpeI ACTAGT 4 cut(s) 2137, 7100, 8291, 8438
SphI GCATGC 2 cut(s) 7098, 8630
SseBI AGGCCT 1 cut(s) 1474
SspI AATATT 4 cut(s) 646, 2593, 8017, 8091
SstI GAGCTC 1 cut(s) 1929
StuI AGGCCT 1 cut(s) 1474
StyI CCWWGG 5 cut(s) 97, 1284, 3267, 5145, 6462
SwaI ATTTAAAT 1 cut(s) 4341
TatI WGTACW 3 cut(s) 3797, 4963, 5729
TauI GCSGC 4 cut(s) 3236, 6488, 7445, 8581
TspGWI ACGGA 5 cut(s) 5456, 5920, 6130, 7786, 8218
Tth111I GACNNNGTC 3 cut(s) 1516, 4754, 8537
Van91I CCANNNNNTGG 3 cut(s) 1670, 5660, 6628
Vha464I CTTAAG 2 cut(s) 1607, 7906
VneI GTGCAC 2 cut(s) 7927, 8033
VpaK11BI GGWCC 8 cut(s) 296, 438, 3781, 4786, 5142, 6704, 7651, 8352
VspI ATTAAT 2 cut(s) 648, 6947
XagI CCTNNNNNAGG 2 cut(s) 2980, 7850
XbaI TCTAGA 1 cut(s) 6130
XceI RCATGY 7 cut(s) 488, 781, 958, 1907, 6796, 7098, 8630
XcmI CCANNNNNNNNNTGG 1 cut(s) 1506
XhoI CTCGAG 2 cut(s) 2285, 2432
XmiI GTMKAC 2 cut(s) 222, 7280
XmnI GAANNNNTTC 7 cut(s) 1344, 1710, 2751, 3552, 4287, 5310, 6581
Zsp2I ATGCAT 2 cut(s) 5542, 6798
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.