No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HOOK | PF05622 | 2188 - 2399 | 8.8e-06 | HOOK protein coiled-coil region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1934 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1405, 6101 |
| AatII | GACGTC | 1 cut(s) | 7344 |
| Acc36I | ACCTGC | 3 cut(s) | 817, 1636, 3514 |
| AccB1I | GGYRCC | 1 cut(s) | 4928 |
| AccI | GTMKAC | 3 cut(s) | 2446, 3179, 5366 |
| AccII | CGCG | 1 cut(s) | 5577 |
| AciI | CCGC | 6 cut(s) | 1412, 3665, 4932, 6483, 7121, 7415 |
| AclI | AACGTT | 1 cut(s) | 5296 |
| AcoI | YGGCCR | 4 cut(s) | 40, 3114, 4107, 6841 |
| AcyI | GRCGYC | 1 cut(s) | 7341 |
| AdeI | CACNNNGTG | 1 cut(s) | 7197 |
| AfeI | AGCGCT | 1 cut(s) | 3340 |
| AflII | CTTAAG | 4 cut(s) | 902, 1537, 4771, 7177 |
| AflIII | ACRYGT | 4 cut(s) | 748, 2707, 3262, 4135 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 7530 |
| AhlI | ACTAGT | 5 cut(s) | 221, 2726, 4121, 5114, 6383 |
| AjnI | CCWGG | 6 cut(s) | 1296, 1485, 4109, 4211, 5004, 5931 |
| Alw21I | GWGCWC | 7 cut(s) | 836, 1224, 2568, 5991, 6147, 6937, 7202 |
| Alw44I | GTGCAC | 2 cut(s) | 5987, 7198 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 215, 2422, 3865, 3983 |
| Ama87I | CYCGRG | 1 cut(s) | 620 |
| Aor51HI | AGCGCT | 1 cut(s) | 3340 |
| AoxI | GGCC | 6 cut(s) | 40, 590, 2520, 3114, 4107, 6841 |
| ApaLI | GTGCAC | 2 cut(s) | 5987, 7198 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 4002, 4034 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 696, 1005, 2808, 3675, 5867 |
| AspLEI | GCGC | 6 cut(s) | 2850, 3341, 4459, 5577, 5579, 6079 |
| AspS9I | GGNCC | 8 cut(s) | 166, 635, 806, 939, 2572, 6736, 7303, 7532 |
| AsuII | TTCGAA | 1 cut(s) | 3499 |
| AsuNHI | GCTAGC | 2 cut(s) | 3335, 5747 |
| AvaI | CYCGRG | 1 cut(s) | 620 |
| AvaII | GGWCC | 8 cut(s) | 166, 635, 806, 939, 2572, 6736, 7303, 7532 |
| BaeGI | GKGCMC | 3 cut(s) | 1309, 5991, 7202 |
| BalI | TGGCCA | 2 cut(s) | 4109, 6843 |
| BanI | GGYRCC | 1 cut(s) | 4928 |
| BanII | GRGCYC | 4 cut(s) | 836, 1224, 2568, 6147 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 4975, 5007 |
| BauI | CACGAG | 3 cut(s) | 5523, 7041, 7259 |
| BbsI | GAAGAC | 5 cut(s) | 618, 3735, 4053, 4542, 7376 |
| Bbv12I | GWGCWC | 7 cut(s) | 836, 1224, 2568, 5991, 6147, 6937, 7202 |
| BbvCI | CCTCAGC | 2 cut(s) | 522, 5742 |
| BceAI | ACGGC | 2 cut(s) | 27, 3129 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2280, 2314 |
| BciT130I | CCWGG | 6 cut(s) | 1298, 1487, 4111, 4213, 5006, 5933 |
| BciVI | GTATCC | 2 cut(s) | 2422, 6232 |
| BclI | TGATCA | 1 cut(s) | 4633 |
| BcuI | ACTAGT | 5 cut(s) | 221, 2726, 4121, 5114, 6383 |
| BfoI | RGCGCY | 2 cut(s) | 2851, 3342 |
| BfrI | CTTAAG | 4 cut(s) | 902, 1537, 4771, 7177 |
| BfuAI | ACCTGC | 3 cut(s) | 817, 1636, 3514 |
| BfuI | GTATCC | 2 cut(s) | 2422, 6232 |
| BglII | AGATCT | 3 cut(s) | 3007, 4038, 6448 |
| BlpI | GCTNAGC | 1 cut(s) | 2237 |
| BmcAI | AGTACT | 2 cut(s) | 283, 7362 |
| Bme1390I | CCNGG | 6 cut(s) | 1298, 1487, 4111, 4213, 5006, 5933 |
| Bme18I | GGWCC | 8 cut(s) | 166, 635, 806, 939, 2572, 6736, 7303, 7532 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 7530 |
| BmeT110I | CYCGRG | 1 cut(s) | 620 |
| BmgT120I | GGNCC | 8 cut(s) | 166, 635, 806, 939, 2572, 6736, 7303, 7532 |
| BmrFI | CCNGG | 6 cut(s) | 1298, 1487, 4111, 4213, 5006, 5933 |
| BmrI | ACTGGG | 1 cut(s) | 2555 |
| BmtI | GCTAGC | 2 cut(s) | 3339, 5751 |
| BmuI | ACTGGG | 1 cut(s) | 2555 |
| BoxI | GACNNNNGTC | 3 cut(s) | 222, 4625, 5952 |
| BpiI | GAAGAC | 5 cut(s) | 618, 3735, 4053, 4542, 7376 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 6026, 6058, 6494, 6526 |
| BpmI | CTGGAG | 2 cut(s) | 369, 5954 |
| Bpu10I | CCTNAGC | 5 cut(s) | 300, 522, 2268, 2567, 5742 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2237 |
| Bpu14I | TTCGAA | 1 cut(s) | 3499 |
| Bsa29I | ATCGAT | 1 cut(s) | 4428 |
| BsaAI | YACGTR | 1 cut(s) | 4136 |
| BsaBI | GATNNNNATC | 3 cut(s) | 738, 4149, 5088 |
| BsaHI | GRCGYC | 1 cut(s) | 7341 |
| BsaI | GGTCTC | 3 cut(s) | 1379, 4816, 5681 |
| BsaWI | WCCGGW | 2 cut(s) | 2246, 2872 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1706, 1736, 5168, 5198, 6764, 6794 |
| Bse118I | RCCGGY | 1 cut(s) | 4166 |
| Bse3DI | GCAATG | 5 cut(s) | 437, 516, 929, 2231, 3765 |
| Bse8I | GATNNNNATC | 3 cut(s) | 738, 4149, 5088 |
| BseBI | CCWGG | 6 cut(s) | 1298, 1487, 4111, 4213, 5006, 5933 |
| BseCI | ATCGAT | 1 cut(s) | 4428 |
| BseGI | GGATG | 4 cut(s) | 538, 1420, 5089, 7165 |
| BseJI | GATNNNNATC | 3 cut(s) | 738, 4149, 5088 |
| BseMI | GCAATG | 5 cut(s) | 437, 516, 929, 2231, 3765 |
| BsePI | GCGCGC | 1 cut(s) | 5575 |
| BseSI | GKGCMC | 3 cut(s) | 1309, 5991, 7202 |
| BseYI | CCCAGC | 2 cut(s) | 934, 1958 |
| BsgI | GTGCAG | 3 cut(s) | 1201, 3542, 3818 |
| Bsh1236I | CGCG | 1 cut(s) | 5577 |
| BshFI | GGCC | 6 cut(s) | 42, 592, 2522, 3116, 4109, 6843 |
| BshNI | GGYRCC | 1 cut(s) | 4928 |
| BshVI | ATCGAT | 1 cut(s) | 4428 |
| BsiHKAI | GWGCWC | 7 cut(s) | 836, 1224, 2568, 5991, 6147, 6937, 7202 |
| BsiHKCI | CYCGRG | 1 cut(s) | 620 |
| BsiSI | CCGG | 4 cut(s) | 1543, 2247, 2873, 4167 |
| BslFI | GGGAC | 5 cut(s) | 952, 1411, 3805, 7328, 7518 |
| BsmBI | CGTCTC | 1 cut(s) | 165 |
| BsmFI | GGGAC | 5 cut(s) | 952, 1411, 3805, 7328, 7518 |
| BsmI | GAATGC | 1 cut(s) | 2291 |
| BsnI | GGCC | 6 cut(s) | 42, 592, 2522, 3116, 4109, 6843 |
| Bso31I | GGTCTC | 3 cut(s) | 1379, 4816, 5681 |
| BsoBI | CYCGRG | 1 cut(s) | 620 |
| Bsp119I | TTCGAA | 1 cut(s) | 3499 |
| Bsp1286I | GDGCHC | 8 cut(s) | 836, 1224, 1309, 2568, 5991, 6147, 6937, 7202 |
| Bsp1407I | TGTACA | 2 cut(s) | 2197, 4225 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2237 |
| Bsp19I | CCATGG | 1 cut(s) | 94 |
| BspACI | CCGC | 6 cut(s) | 1412, 3665, 4932, 6483, 7121, 7415 |
| BspANI | GGCC | 6 cut(s) | 42, 592, 2522, 3116, 4109, 6843 |
| BspDI | ATCGAT | 1 cut(s) | 4428 |
| BspFNI | CGCG | 1 cut(s) | 5577 |
| BspHI | TCATGA | 4 cut(s) | 1732, 1987, 2941, 6147 |
| BspMAI | CTGCAG | 6 cut(s) | 211, 1789, 3393, 4482, 4692, 6004 |
| BspMI | ACCTGC | 3 cut(s) | 817, 1636, 3514 |
| BspOI | GCTAGC | 2 cut(s) | 3339, 5751 |
| BspQI | GCTCTTC | 2 cut(s) | 1161, 5679 |
| BspT104I | TTCGAA | 1 cut(s) | 3499 |
| BspT107I | GGYRCC | 1 cut(s) | 4928 |
| BspTI | CTTAAG | 4 cut(s) | 902, 1537, 4771, 7177 |
| BspTNI | GGTCTC | 3 cut(s) | 1379, 4816, 5681 |
| BsrDI | GCAATG | 5 cut(s) | 437, 516, 929, 2231, 3765 |
| BsrFI | RCCGGY | 1 cut(s) | 4166 |
| BsrGI | TGTACA | 2 cut(s) | 2197, 4225 |
| BssAI | RCCGGY | 1 cut(s) | 4166 |
| BssHII | GCGCGC | 1 cut(s) | 5575 |
| BssNI | GRCGYC | 1 cut(s) | 7341 |
| BssSI | CACGAG | 3 cut(s) | 5523, 7041, 7259 |
| BssT1I | CCWWGG | 8 cut(s) | 94, 2523, 3373, 3777, 4803, 5724, 6072, 6756 |
| Bst2BI | CACGAG | 3 cut(s) | 5523, 7041, 7259 |
| Bst2UI | CCWGG | 6 cut(s) | 1298, 1487, 4111, 4213, 5006, 5933 |
| Bst6I | CTCTTC | 8 cut(s) | 8, 262, 879, 1119, 1161, 4029, 4151, 5679 |
| BstACI | GRCGYC | 1 cut(s) | 7341 |
| BstAFI | CTTAAG | 4 cut(s) | 902, 1537, 4771, 7177 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 4854, 5161, 5446, 5699 |
| BstAUI | TGTACA | 2 cut(s) | 2197, 4225 |
| BstBAI | YACGTR | 1 cut(s) | 4136 |
| BstBI | TTCGAA | 1 cut(s) | 3499 |
| BstDSI | CCRYGG | 1 cut(s) | 94 |
| BstF5I | GGATG | 4 cut(s) | 538, 1420, 5089, 7165 |
| BstFNI | CGCG | 1 cut(s) | 5577 |
| BstH2I | RGCGCY | 2 cut(s) | 2851, 3342 |
| BstHHI | GCGC | 6 cut(s) | 2850, 3341, 4459, 5577, 5579, 6079 |
| BstNI | CCWGG | 6 cut(s) | 1298, 1487, 4111, 4213, 5006, 5933 |
| BstNSI | RCATGY | 8 cut(s) | 137, 407, 752, 2711, 3266, 3437, 4390, 6381 |
| BstPAI | GACNNNNGTC | 3 cut(s) | 222, 4625, 5952 |
| BstSCI | CCNGG | 6 cut(s) | 1296, 1485, 4109, 4211, 5004, 5931 |
| BstSLI | GKGCMC | 3 cut(s) | 1309, 5991, 7202 |
| BstUI | CGCG | 1 cut(s) | 5577 |
| BstV2I | GAAGAC | 5 cut(s) | 618, 3735, 4053, 4542, 7376 |
| BstX2I | RGATCY | 8 cut(s) | 826, 3007, 3554, 4038, 5734, 6448, 7254, 7402 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 6232 |
| BstYI | RGATCY | 8 cut(s) | 826, 3007, 3554, 4038, 5734, 6448, 7254, 7402 |
| Bsu15I | ATCGAT | 1 cut(s) | 4428 |
| BsuI | GTATCC | 2 cut(s) | 2422, 6232 |
| BsuRI | GGCC | 6 cut(s) | 42, 592, 2522, 3116, 4109, 6843 |
| BsuTUI | ATCGAT | 1 cut(s) | 4428 |
| BtgI | CCRYGG | 1 cut(s) | 94 |
| BtgZI | GCGATG | 2 cut(s) | 3102, 6803 |
| BtsCI | GGATG | 4 cut(s) | 538, 1420, 5089, 7165 |
| BtsI | GCAGTG | 4 cut(s) | 91, 4521, 5997, 6223 |
| BveI | ACCTGC | 3 cut(s) | 817, 1636, 3514 |
| CaiI | CAGNNNCTG | 4 cut(s) | 215, 2422, 3865, 3983 |
| CciI | TCATGA | 4 cut(s) | 1732, 1987, 2941, 6147 |
| CfoI | GCGC | 6 cut(s) | 2850, 3341, 4459, 5577, 5579, 6079 |
| Cfr10I | RCCGGY | 1 cut(s) | 4166 |
| Cfr13I | GGNCC | 8 cut(s) | 166, 635, 806, 939, 2572, 6736, 7303, 7532 |
| ClaI | ATCGAT | 1 cut(s) | 4428 |
| CseI | GACGC | 1 cut(s) | 6967 |
| CsiI | ACCWGGT | 1 cut(s) | 1485 |
| DraI | TTTAAA | 1 cut(s) | 5028 |
| DraIII | CACNNNGTG | 1 cut(s) | 7197 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1405, 6101 |
| DriI | GACNNNNNGTC | 1 cut(s) | 7530 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1405, 6101 |
| EaeI | YGGCCR | 4 cut(s) | 40, 3114, 4107, 6841 |
| Eam1104I | CTCTTC | 8 cut(s) | 8, 262, 879, 1119, 1161, 4029, 4151, 5679 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 7530 |
| EarI | CTCTTC | 8 cut(s) | 8, 262, 879, 1119, 1161, 4029, 4151, 5679 |
| EciI | GGCGGA | 1 cut(s) | 3680 |
| Ecl136II | GAGCTC | 4 cut(s) | 834, 1222, 2566, 6145 |
| Eco130I | CCWWGG | 8 cut(s) | 94, 2523, 3373, 3777, 4803, 5724, 6072, 6756 |
| Eco147I | AGGCCT | 2 cut(s) | 592, 2522 |
| Eco24I | GRGCYC | 4 cut(s) | 836, 1224, 2568, 6147 |
| Eco31I | GGTCTC | 3 cut(s) | 1379, 4816, 5681 |
| Eco32I | GATATC | 3 cut(s) | 586, 4255, 5090 |
| Eco47I | GGWCC | 8 cut(s) | 166, 635, 806, 939, 2572, 6736, 7303, 7532 |
| Eco47III | AGCGCT | 1 cut(s) | 3340 |
| Eco53kI | GAGCTC | 4 cut(s) | 834, 1222, 2566, 6145 |
| Eco88I | CYCGRG | 1 cut(s) | 620 |
| EcoICRI | GAGCTC | 4 cut(s) | 834, 1222, 2566, 6145 |
| EcoO109I | RGGNCCY | 3 cut(s) | 806, 2572, 7532 |
| EcoRI | GAATTC | 3 cut(s) | 364, 2857, 6055 |
| EcoRII | CCWGG | 6 cut(s) | 1296, 1485, 4109, 4211, 5004, 5931 |
| EcoRV | GATATC | 3 cut(s) | 586, 4255, 5090 |
| EcoT14I | CCWWGG | 8 cut(s) | 94, 2523, 3373, 3777, 4803, 5724, 6072, 6756 |
| EcoT22I | ATGCAT | 1 cut(s) | 4734 |
| EcoT38I | GRGCYC | 4 cut(s) | 836, 1224, 2568, 6147 |
| ErhI | CCWWGG | 8 cut(s) | 94, 2523, 3373, 3777, 4803, 5724, 6072, 6756 |
| Esp3I | CGTCTC | 1 cut(s) | 165 |
| FaqI | GGGAC | 5 cut(s) | 952, 1411, 3805, 7328, 7518 |
| FauI | CCCGC | 1 cut(s) | 6490 |
| FauNDI | CATATG | 1 cut(s) | 499 |
| FbaI | TGATCA | 1 cut(s) | 4633 |
| FblI | GTMKAC | 3 cut(s) | 2446, 3179, 5366 |
| FokI | GGATG | 4 cut(s) | 545, 1427, 5096, 7172 |
| FriOI | GRGCYC | 4 cut(s) | 836, 1224, 2568, 6147 |
| GlaI | GCGC | 6 cut(s) | 2849, 3340, 4458, 5576, 5578, 6078 |
| GsaI | CCCAGC | 2 cut(s) | 938, 1962 |
| GsuI | CTGGAG | 2 cut(s) | 369, 5954 |
| HaeII | RGCGCY | 2 cut(s) | 2851, 3342 |
| HaeIII | GGCC | 6 cut(s) | 42, 592, 2522, 3116, 4109, 6843 |
| HapII | CCGG | 4 cut(s) | 1543, 2247, 2873, 4167 |
| HgaI | GACGC | 1 cut(s) | 6967 |
| HhaI | GCGC | 6 cut(s) | 2850, 3341, 4459, 5577, 5579, 6079 |
| Hin1I | GRCGYC | 1 cut(s) | 7341 |
| Hin6I | GCGC | 6 cut(s) | 2848, 3339, 4457, 5575, 5577, 6077 |
| HinP1I | GCGC | 6 cut(s) | 2848, 3339, 4457, 5575, 5577, 6077 |
| HincII | GTYRAC | 5 cut(s) | 1332, 1819, 3307, 4299, 4495 |
| HindII | GTYRAC | 5 cut(s) | 1332, 1819, 3307, 4299, 4495 |
| HpaI | GTTAAC | 2 cut(s) | 3307, 4495 |
| HpaII | CCGG | 4 cut(s) | 1543, 2247, 2873, 4167 |
| HpyCH4IV | ACGT | 6 cut(s) | 1792, 2685, 4135, 5296, 6657, 7341 |
| HpySE526I | ACGT | 6 cut(s) | 1792, 2685, 4135, 5296, 6657, 7341 |
| Hsp92I | GRCGYC | 1 cut(s) | 7341 |
| HspAI | GCGC | 6 cut(s) | 2848, 3339, 4457, 5575, 5577, 6077 |
| KflI | GGGWCCC | 1 cut(s) | 7532 |
| Ksp22I | TGATCA | 1 cut(s) | 4633 |
| KspAI | GTTAAC | 2 cut(s) | 3307, 4495 |
| LguI | GCTCTTC | 2 cut(s) | 1161, 5679 |
| MabI | ACCWGGT | 1 cut(s) | 1485 |
| MaeII | ACGT | 6 cut(s) | 1792, 2685, 4135, 5296, 6657, 7341 |
| MfeI | CAATTG | 4 cut(s) | 1278, 2732, 6237, 7145 |
| MflI | RGATCY | 8 cut(s) | 826, 3007, 3554, 4038, 5734, 6448, 7254, 7402 |
| MhlI | GDGCHC | 8 cut(s) | 836, 1224, 1309, 2568, 5991, 6147, 6937, 7202 |
| MlsI | TGGCCA | 2 cut(s) | 4109, 6843 |
| MluNI | TGGCCA | 2 cut(s) | 4109, 6843 |
| MmeI | TCCRAC | 6 cut(s) | 706, 2781, 4299, 5019, 6424, 6762 |
| Mox20I | TGGCCA | 2 cut(s) | 4109, 6843 |
| Mph1103I | ATGCAT | 1 cut(s) | 4734 |
| MroXI | GAANNNNTTC | 5 cut(s) | 696, 1005, 2808, 3675, 5867 |
| MscI | TGGCCA | 2 cut(s) | 4109, 6843 |
| MslI | CAYNNNNRTG | 9 cut(s) | 1737, 2313, 2712, 3627, 4737, 4926, 6090, 6354, 7073 |
| Msp20I | TGGCCA | 2 cut(s) | 4109, 6843 |
| MspA1I | CMGCKG | 6 cut(s) | 1412, 4661, 4934, 6005, 6392, 6581 |
| MspCI | CTTAAG | 4 cut(s) | 902, 1537, 4771, 7177 |
| MspI | CCGG | 4 cut(s) | 1543, 2247, 2873, 4167 |
| MspR9I | CCNGG | 6 cut(s) | 1298, 1487, 4111, 4213, 5006, 5933 |
| MunI | CAATTG | 4 cut(s) | 1278, 2732, 6237, 7145 |
| Mva1269I | GAATGC | 1 cut(s) | 2291 |
| MvaI | CCWGG | 6 cut(s) | 1298, 1487, 4111, 4213, 5006, 5933 |
| MvnI | CGCG | 1 cut(s) | 5577 |
| NcoI | CCATGG | 1 cut(s) | 94 |
| NdeI | CATATG | 1 cut(s) | 499 |
| NheI | GCTAGC | 2 cut(s) | 3335, 5747 |
| NsiI | ATGCAT | 1 cut(s) | 4734 |
| NspI | RCATGY | 8 cut(s) | 137, 407, 752, 2711, 3266, 3437, 4390, 6381 |
| NspV | TTCGAA | 1 cut(s) | 3499 |
| PaeI | GCATGC | 2 cut(s) | 137, 6381 |
| PaeR7I | CTCGAG | 1 cut(s) | 620 |
| PagI | TCATGA | 4 cut(s) | 1732, 1987, 2941, 6147 |
| PauI | GCGCGC | 1 cut(s) | 5575 |
| PceI | AGGCCT | 2 cut(s) | 592, 2522 |
| PciI | ACATGT | 3 cut(s) | 748, 2707, 3262 |
| PciSI | GCTCTTC | 2 cut(s) | 1161, 5679 |
| PctI | GAATGC | 1 cut(s) | 2291 |
| PdmI | GAANNNNTTC | 5 cut(s) | 696, 1005, 2808, 3675, 5867 |
| PfoI | TCCNGGA | 1 cut(s) | 4211 |
| Ppu21I | YACGTR | 1 cut(s) | 4136 |
| PpuMI | RGGWCCY | 3 cut(s) | 806, 2572, 7532 |
| PscI | ACATGT | 3 cut(s) | 748, 2707, 3262 |
| PshAI | GACNNNNGTC | 3 cut(s) | 222, 4625, 5952 |
| PsiI | TTATAA | 1 cut(s) | 1934 |
| Psp124BI | GAGCTC | 4 cut(s) | 836, 1224, 2568, 6147 |
| Psp1406I | AACGTT | 1 cut(s) | 5296 |
| Psp5II | RGGWCCY | 3 cut(s) | 806, 2572, 7532 |
| Psp6I | CCWGG | 6 cut(s) | 1296, 1485, 4109, 4211, 5004, 5931 |
| PspFI | CCCAGC | 2 cut(s) | 934, 1958 |
| PspGI | CCWGG | 6 cut(s) | 1296, 1485, 4109, 4211, 5004, 5931 |
| PspPI | GGNCC | 8 cut(s) | 166, 635, 806, 939, 2572, 6736, 7303, 7532 |
| PspPPI | RGGWCCY | 3 cut(s) | 806, 2572, 7532 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 6792, 6824 |
| PstI | CTGCAG | 6 cut(s) | 211, 1789, 3393, 4482, 4692, 6004 |
| PstNI | CAGNNNCTG | 4 cut(s) | 215, 2422, 3865, 3983 |
| PsuI | RGATCY | 8 cut(s) | 826, 3007, 3554, 4038, 5734, 6448, 7254, 7402 |
| PteI | GCGCGC | 1 cut(s) | 5575 |
| PvuII | CAGCTG | 4 cut(s) | 4661, 6005, 6392, 6581 |
| RseI | CAYNNNNRTG | 9 cut(s) | 1737, 2313, 2712, 3627, 4737, 4926, 6090, 6354, 7073 |
| SacI | GAGCTC | 4 cut(s) | 836, 1224, 2568, 6147 |
| SapI | GCTCTTC | 2 cut(s) | 1161, 5679 |
| Sau96I | GGNCC | 8 cut(s) | 166, 635, 806, 939, 2572, 6736, 7303, 7532 |
| ScaI | AGTACT | 2 cut(s) | 283, 7362 |
| ScrFI | CCNGG | 6 cut(s) | 1298, 1487, 4111, 4213, 5006, 5933 |
| SduI | GDGCHC | 8 cut(s) | 836, 1224, 1309, 2568, 5991, 6147, 6937, 7202 |
| SexAI | ACCWGGT | 1 cut(s) | 1485 |
| Sfr274I | CTCGAG | 1 cut(s) | 620 |
| SfuI | TTCGAA | 1 cut(s) | 3499 |
| SinI | GGWCC | 8 cut(s) | 166, 635, 806, 939, 2572, 6736, 7303, 7532 |
| SlaI | CTCGAG | 1 cut(s) | 620 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 1737, 2313, 2712, 3627, 4737, 4926, 6090, 6354, 7073 |
| SpeI | ACTAGT | 5 cut(s) | 221, 2726, 4121, 5114, 6383 |
| SphI | GCATGC | 2 cut(s) | 137, 6381 |
| SseBI | AGGCCT | 2 cut(s) | 592, 2522 |
| SsiI | CCGC | 6 cut(s) | 1412, 3665, 4932, 6483, 7121, 7415 |
| SspI | AATATT | 3 cut(s) | 457, 2534, 7288 |
| SstI | GAGCTC | 4 cut(s) | 836, 1224, 2568, 6147 |
| StuI | AGGCCT | 2 cut(s) | 592, 2522 |
| StyD4I | CCNGG | 6 cut(s) | 1296, 1485, 4109, 4211, 5004, 5931 |
| StyI | CCWWGG | 8 cut(s) | 94, 2523, 3373, 3777, 4803, 5724, 6072, 6756 |
| TaiI | ACGT | 6 cut(s) | 1795, 2688, 4138, 5299, 6660, 7344 |
| TauI | GCSGC | 2 cut(s) | 4934, 7418 |
| TspGWI | ACGGA | 3 cut(s) | 158, 189, 6167 |
| Vha464I | CTTAAG | 4 cut(s) | 902, 1537, 4771, 7177 |
| VneI | GTGCAC | 2 cut(s) | 5987, 7198 |
| VpaK11BI | GGWCC | 8 cut(s) | 166, 635, 806, 939, 2572, 6736, 7303, 7532 |
| XbaI | TCTAGA | 4 cut(s) | 1271, 3229, 5092, 5848 |
| XceI | RCATGY | 8 cut(s) | 137, 407, 752, 2711, 3266, 3437, 4390, 6381 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 7210 |
| XhoI | CTCGAG | 1 cut(s) | 620 |
| XmiI | GTMKAC | 3 cut(s) | 2446, 3179, 5366 |
| XmnI | GAANNNNTTC | 5 cut(s) | 696, 1005, 2808, 3675, 5867 |
| ZraI | GACGTC | 1 cut(s) | 7342 |
| ZrmI | AGTACT | 2 cut(s) | 283, 7362 |
| Zsp2I | ATGCAT | 1 cut(s) | 4734 |