Rh6CG465200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Reverse (-)
63736039 .. 63769879
33841 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG465200.1

Sequence Viewer

Length: 7548 bp
ATGGAGAAGAAGAAGAGCCGTACCAATCTGCTCGCTGCTGGCCGTAAAAAGCTTCAACAATTTCGTCAGAAGAAGGATAAAGGCAGTGGAAGCCATGGAAAATCCACGAAAAAGTCTGGAAAATCAGAGCAGCATGCAACTAAACCTACAGCAGCATCGTCTCAGGTACGTGACGGAGAAACTGAGTCTGCTGTAGGTTCTAATTCTGCAGACTCTGACACTAGTCAAATTCGGGTCAGTAAGCCTGATGCTGACTCTTCTGTTCAGAATGAAGGTGAGAGTACTAGGACTGCTGATGCTAAGGTGGCAAGAGACATTTCATTGGACACTTCACATACAGTGGATTCTGGAGGAGAAGCCAAGAATTCAAAGATGTCTATACAGGTTGATGTGTCAGCCCAACATGCTTCAGTCGATATTACAGAGAGGAAGGAGTCATTGCCTTCACGGGAAAATATTAAAACATCGTTAGTGCAAAAGAGAGAAGATCAGGAAGCTGAGGGTTTGGATGCAAGGCAGTCTAATCCTAGTCGTGAAGTAAAAGTGGAGCTTGAAGGAGATATCAGGCCTTCTGCTTCCGAGCTTGAAAGAAGTCTCGAGTCTTCTTCTGGTCCAGCTTCCTATGTAGATGAGCCAACTGGTGCAGTGGATGAAGCATCTGTTTCAGCTGGTGCAACCATGTTATCAGGCAGGGAAGAAAGAGTTCTGGCAGATACAGAATATCAGGCAGTTGGAGAGGATTGTCATCAGGAATATGTTATTGATGGTTGTGAAAGGGCTTTGGAAACAAATATGATGAGTTCGGATAGAGGACCTGCATCACCTGTTGCAGATCCGAGCTCAATCAGTCTCTCACAGATCACAGAAGTTATTAAGAGGCTTAATGAAGAAGAGTTCTGTATTCTTCTTAAGTCCATTGAATCAGTTTCTAGTACATTGATGGGGACCAACAGTTTATTTGTAGCAGAACATGGCTTTCGAGAATTTTTTGAGCAACTTAAAGAAGAATTGGTTCTCACAAATTTCACCAAAGATGTCTTTCACTTGCAGATTGAACAGCAGTTTGAGATGCAACTAGAGTTTGATTGCCAGCATCATCAGTTGCTTGATGAAACATCTCTTCTTCGTGCTTCACTGAATGAAGTTCGTGAGAAGAACCAGTGTCTTGCTGAAGAGCTTGCACAGTGCAGGGGTGAACTCCAAGCTGTTGCTTGTGGGAAGGAGGAGCTCCAAAACAAATTTCATACTGTGAAGGTGGAGGGTGAAGAAGCTTCTTCTAGAACAATTGAGTTGCATAGCAACCTGGAAAGGGCACAGCAGGATTTGTTCAGACTGTCAACAGAGTTAGCTGATTGTAAAGGTTTGGTGCAAGCCTTACAGGTGGAAAATGAGACCTTAAATGGGACTATAGTGTCAGCGGATGAAGTTAAAAGTAAACTTATGGAGCAAAATAATTTGTATCTTCTTGAGAAGGAGAAGCTTTCAACTGACCTGGTTGATCGTGAAAGTTTAGTGGCAACTCTACGGGGTCAAATATCAACCTTAAGCGGGAATTTGGATTCAGTAACACATGAGAGGGAGCATCTTTCTTGTGAAAATGAGAAACTTGCAACAGAACTGGCTGACAGGAAGAATATAGTATCAGCTTTGCAGGTAGAAAATGCCAGCTGTCTTGCTTTGGTTATGGAGGAGAAAAAGAAGCTTGAGGAGGAGAGGGAGTATTCTGCTCATGAGAATGAGAGACTTTCAGCCGAACTTCTTGTTCTTCAAGAACGGTTATCTGCAGAACGTGAAGAACAAGTAAGGTTTGAGGTTGACCTAAAAGAAACAACAAAACGCCTTGAACAGCTCACTGATGAAAATATTTCTCTTACTAGCAATCTGGACATACTTAAAGCTAAGATGAGTGAGGTTGAAAAGAGTGGGTTTATAATACCAGCTCAAGTTGGGGAAGCTGGGAACCAAGTTGAACTTAGCAGGGGTCATGATCTTGCAACTGAAGATGATAATTCTCAGCAAATTCACGGGAAGCAAGACAGTGAAGCTTCCTTTGTGGTGGATAAATCTTTATCTGATGGTTGTTGGGGCTCACCATTTGTGAATACTGAGCAGGAAGTCTTTGATGATTCCGATGGGTTTATCGCACTGAATGGACACTTGGACAAGGCAGATAAAATGTTGCATAAACTTGTACAGGAAGTTGAAAGCATCTGCTCTCATTCCACATTGCTAAGCAAGTCCGGTCACAAAGTTCCTGTAGCTCAGGTATCAAAACTGATTCAAGCATTCGAGTCGAAGGCTCATCAAGATGAGCCAGTAGAGGGGGAAGCTCTAACCGATAATCAATCACCAGAAGATTCAGTTGTGTCGGATCAGAATGAGGCCTTGGAAGAATATTGCAAGAAACTGGGAGCAACGAACATTGAGCTCAGGGTCCTATATGAAGCTTTAGAAGAACATAGGGGAAGCATTGAATCTAGGAACTGTGAGCTTTTCATTCTCTGCGAATCCTTACAACTACAAGTCACTAATCTTAAAGTAGAAAACGTGGAAGCTGACAGAAAGCTACATGTGTATGAATCAAGAACTAGTCAATTGCAGAGTCGGTTGCATGATCTACATTTAATTTCAAATGTTATGGTATCTCAAACCTCTGAGCAGTTGGAAAGTTTTCACAAGGAGGCTGCTGAGAAAGTTTTGATGCTTGAGCGCCATTGGAATTCAACTATTGATCCAGTTCTTGAAGCAACTGGCAAGCTTGATGAATCTCTTGGTAGGATCACCACAACTACAACAGTCTCTCATGATTCTTTGGACAGAATCAGTTATTCAGTTGCTTCTGTTTATGATGCCATCAGTTTTATTCAAGATCTGAAGGACAAACTTGAAAGTTCTCAAACAGAACATGAAGCAGTCTTTTCTTTATACAAAGAAGCGAATGAGAAATGCTATGATCTGCATGGAAAGAATCAAACGGCCAGTGACTTGTTGCAGAAGTTGTATGGCAACCTTTCTAAACTACTCACGGTTTTGCATGGGTCTACAGATGAAAGTGATATGTACTTAGAACCTGAGAAGTTTCCTGATCTTCTAGATTACAGTAATTATGGAACCATCATAGAACATGTGGAATCTTCTTTGAGGGGGAGTCTGCAACTTGAATCTGTTAACAAGAAACTAAATTCAGAGTTGATGGCTAGCGCTGAAGAAGTTGAGGAACTGAAACAAAGATGCCCTGGTTCTACTACTCTGCAGAAGTTAATAGAAGATGTTGAAGGGGTGCTGAAAGTGGAACATGTTGAGTTTCAAGTGGATAAAACCCTTGCTTCACACCTTGAATCACTGGTGTCATGTCTTGTTCGAAAATGCGAGGAGGCTGATGTGCAGGTAGGCTTATCTAAGGAAGAAGATTCTGGATCTAAGGTGGTGAAGCTGACTTCAATGCAGGAAGAAGTACAGCAGTTAAATGCCTTGTGTCTCAAGCATGAAAGTGAACTCATTGTTCTAAGGGAAAGTTTACATCAGGCGGAGGAAGCACTTCTTGTTGCTCGTTCTGAGATACAAGGGAAAGTAAATGAACTTGAACAGTCAGAGCAACGGGTGTCTTCCCTTAGAGAGAAGCTTACCATTGCTGTCACCAAGGGGAAAGGTTTGGTTGTGCAGCGAGATGGTCTGAAGCAGTCCCTTAACGAGAAATATGTTGAACTGGAAAGATTCTCACAGGAACTGCAAATGAAAGATGCAAGGCTTCTTGAGATTGAAGCAAAACTTGAGGCATTTTCAGAGTCAGGTGAACGAGTGGAAGCTCTGGAATCTGAGCTTTCATATATTCGCAATTCAGCTACTGCATTAAGAGAATCATTCCTTCTCAAAGATTCTGTCCTTCAGAGAATAGAAGAGATCTTGGAAGACCTTGATCTGCCAGAGCATTTTTATTCAAGAGATATTATTGAGAAGATTGATTGGCTGGCCAGGACAGCTACTAGTAACACTTTACGTGTGACTGATTCAGATCAGAAGAGTTCTGCCGGTGGAGGTTCATACTCTGATGCTGGTTTTGTTGTTATGGATTCCTGGAAAGATGATGTACAGCCAAGTTCAGATTCAAGTGAAGATATCAAAAGAAAATATGATGAACTAAAGAGTAGATTTTATGGGTTGACTGAACAGAATGAAATGTTGGAACAATCCTTAATGGCAAGGAACAACATAGTACAGAGATGGGAGGAACTTTTGGACAGGATCGACATGCCACCACATCTGCGATCTGTGGAGCCAAAGGATAGGATCGATTGGTTAAGCAAAGCACTTTTAGAAGCGCAGGAAGATAATATGTCTCTGCAGCAGAAGGTTGTTAACCTAGAAAACCATTGTGTATCACTCACTGCTGATTTGGAAGACTCGCAAAGGGGAGTGTCTGACCTTGAGGCAGACCTTCAAAGATTTATCCACAAGAGAGATTATCTTTCTGAAAGATTGGAGACTCTGGTCAATGATCAGGAGAAGCTTTCAACAAAGGCAGCTGAATTTGAGCTTGAGAATGAAAAGCTACAGAAGGAAGTTACTGATTTGCAAGAAAATGTAGCCAAGATGCATGGAAATGAGAATCAAATTCTCAGCATAGAAGCTGACTTAAGAAGATTACAGAGTTTGGTTACTGATGCCTTGGAGGTCTCTGGATCAAAGTATGAGTATTCTGGTGGTGGTAGCATTGAGTGCTTGGAAGGGTTACTGAATAAGCTTTTAGAGAGTTATGCAACTCTTTCCTCGGAAAAACCTGTGCATGGGGGTGCCGCTGAAGGTCTCCATACTGAATATGCTGATGCAACAGTTATTGGATCGAGAAGCCTAAATACACTTGATTCCCAGGAATCAGATATAGATGTTTTAAAGAAAGAGTTGGAGGAGGCTCAACATGAACTTTTGGGTGTGAAGGAGGAGAGGGATGGATATCTAGAGAAGCAACAGTCTATGGCTAGTGAATTTGAAGCATTACATAACAAAGTGAATGAGTTGCAAGGGCTGCTTAATCAAGAGGAGCAGAAGTTAGCTTCTGTTAGAGAGAAGTTAAATGTTGCAGTCAGAAAAGGGAAGTCATTGGTACAACAGCGTGACAGTCTGAAACAAAGTATTGATGAGGTCAATTCTGAGGTCGAACGTTTGAGATCAGAGATCAAGATGGGGCAAGTCAAAATTGCAGAGTATGAACAAAACTTCAGGGATTTGTCTACTTTCCCTAGTAGGGTAGAAGCCTTAGAATCTGAGACATTGTTCTTGAGGAATTGTTTGAATGAAACTGAGCAGAATTTGCAGCACAAAGAAAATACTTTGAGCATGATTGTAAATATCTTAGACAACATTGATGTAGGAGGCGATTTTAACTCTCGTGATCCAGTTGTGAAGTTAGAACAAATTGGGAAAATGTGCTTTGATCTGCGCGCAGATGTAGCTTCTTCTGAGCAAGAGGCTAGGAAATTCAAAAGAGCAGCAGAGCTACTCCTCGCAGAACTGAACGAGGTTCAAGAGAGGAATGATCGTCTCCAAGAAGAGCTTGCAAAATCTGCTGATGAAATTTCTGTACTCTCCAAGGAAAGGGATCTTGCTGAGGCTAGCAAACTTGAAGCTGTTTTAAGTCTTGAAAAGCTATCTACTGCTCACTCCGAGGAAAGAAAAAACCAATTTTCTGAATTCGCAGGACTGAAATCTGGTCTAGATCAACTCAAGAAGGGTTTCCATGATATTTGCAATTCATTGGTCGATATTTTTTACAACGACTTGGAATTTTTGAACAACCTGGAGTCTGGTATTGACTCATGTCTCAAATTAAATAGTGCTAATGTGGTTGATGTGCACCCCTTCACTGCAGCTGGTGGATTTCTAACGAGCAAATCAGATAAGGATAACTCTATTTCAATGAATTCTAGGTCAGACACCAATGCGCATGGACATTTTGGTGACAGTTTTGTCATCGAAACCTTTACATACATAACACATTATGTGCAAGATCTCATGACGGAGATTGGTGTGCTTAAAGAAAAATTAGATGAACACTCAATGTCTTTGCATGAAAAAACTAGCAGTGTATCCAGATTGGTGGCAATTGTTCGTGGAGAGATAACTTCCAAAAACGAGTCATTTGAAGCCTTGAGGAGAGACTTTTTGCAGATGGAAATGGTCAAAAAGGAAAAGGACAAGGAACTTGTTGTCTTGCATAGAAATGCTGCCGTGCTTTTTGAAGCATGCACTAGTTCAGCTGTGGAAATAAATAGAAGAAAAGATGAATTGGTGGGAAATAGTTGGGCTGTTGGAGATCTGGGAATGACATCAAAACGAACAGAATTGCCCGCTTTCATTGGAGAGGGTGAGCTGTACTCTGAGGAATCTGTTAGGTCTGTGGCAGACAGGCTTTTGTCGGCTGCTAGTGATTTTGCTACTCTGACAGCTGAAATAGTTGAAGGCAGCCAAAAGGAAATGAAGCTTACCATTTCAAATTTTCAGAAAGAGCTTCAAGAGAAGGACGTTCAAAAGGAGAGGATTTTCATGGAGCTTGTAAGTCAAATCAAGGAAGCTGAAGATACTGCAAGCAGCTATTCAGTGGACCTTGAATCTTCAAAAACCTTGGTGTATGATTTGGAGAAACAGTTGGAAGCGATGAAAGGTGAACGCAACCTACTTGAGCAGAGAGTAAAGGAGCTAGATGATGGCCATGCCACCTCTGACGAGTTACAACAGAGGGTCAGAACACTAACTGATGAGCTTGCTGCCAAAGACCATGAAATTGAGGAGCTAATGCAAGCACTTGATGAGGAGGAGGTGCAGATGCAAGGTATCACCTACAAGATTAAGGAACTGGAAAAGATTGTGGAACAAAAGAACCTAGATTTAGAGAACCTTGAAGCTTCTCGTGGGAAGGTTATGAAAAAGCTCTCCATCACTGTGTATAAGTTTGACGAGCTGCATCACCTATCTGCAAGCCTCCTTGCGGAAGTTGAAAAATTGCAGTCACAATTGCAAGATCGGGATGCAGAGATTTCTTTCTTAAGGCAGGAGGTCACTAGGTGCACCAATGATGTTCTGGTTGCATCAAAAGTCAATAAGAAGGGAAATTCAGATGAGATCCACGAGTTATTAACATGGTTTGATATGAATATTCCTGCATTTGGGGTCCACAGTGAGTATCTTGAAAATAAGAACAACAGTGACGTCCCTGAACAAAAGGAAGTACTCAAGAAGACAGTTGATTCAATTTTATCAGAATTAGGGGATCTACGGGCTGCGGCTCAAAGCAAAGATATATTGTTGCAAGAAGAAAGGACTAAGGTAGAAGAATTAACACTCAAGGGTCAGACTCTTGAGGAGTGTTTACGGGAGAAGGAATCACGATTAAATCTGCTTGAAGGTGTGGAATACGGCCAAGCAACTAGCTCGACCTCAGAGATTCATGAAGTTGAGCCTGCGGTGAGATCAATGTTTGATATTTTTAATGTTACATTACTTGCATGCCTTTTTGCCTTTTTCATTTGTACTTCTTACGTGAAGAGAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2515

Amino Acids

282.78

Weight (kDa)

4.79

Isoelectric Point (pI)

47.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HOOK PF05622 2134 - 2353 4.3e-06 HOOK protein coiled-coil region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1931
AasI GACNNNNNNGTC 2 cut(s) 1411, 5963
AatII GACGTC 1 cut(s) 7206
Acc16I TGCGCA 1 cut(s) 5940
Acc36I ACCTGC 3 cut(s) 823, 1642, 3376
AccB1I GGYRCC 1 cut(s) 4790
AccI GTMKAC 2 cut(s) 3041, 5228
AccII CGCG 1 cut(s) 5439
AciI CCGC 8 cut(s) 1418, 1548, 3527, 4794, 6345, 6983, 7277, 7457
AclI AACGTT 1 cut(s) 5158
AcoI YGGCCR 5 cut(s) 40, 2976, 3969, 6703, 7411
AcyI GRCGYC 1 cut(s) 7203
AdeI CACNNNGTG 1 cut(s) 7059
AfeI AGCGCT 1 cut(s) 3202
AfiI CCNNNNNNNGG 9 cut(s) 1309, 1401, 1548, 2321, 4784, 5242, 5592, 6982, 7160
AflII CTTAAG 4 cut(s) 908, 1543, 4633, 7039
AflIII ACRYGT 4 cut(s) 2569, 3124, 3295, 3997
AhlI ACTAGT 4 cut(s) 221, 2588, 3983, 6245
AjnI CCWGG 7 cut(s) 1302, 1491, 3235, 3971, 4073, 4866, 5793
Alw21I GWGCWC 5 cut(s) 842, 1230, 2430, 5853, 7064
Alw44I GTGCAC 2 cut(s) 5849, 7060
AlwNI CAGNNNCTG 3 cut(s) 215, 3727, 3845
Ama87I CYCGRG 1 cut(s) 596
Aor51HI AGCGCT 1 cut(s) 3202
AoxI GGCC 7 cut(s) 40, 566, 2382, 2976, 3969, 6703, 7411
ApaLI GTGCAC 2 cut(s) 5849, 7060
ArsI GACNNNNNNTTYG 2 cut(s) 3864, 3896
Asp700I GAANNNNTTC 5 cut(s) 702, 1011, 2670, 3537, 5729
AspLEI GCGC 6 cut(s) 2712, 3203, 4321, 5439, 5441, 5941
AspS9I GGNCC 6 cut(s) 611, 812, 945, 2434, 6598, 7165
AsuII TTCGAA 1 cut(s) 3361
AsuNHI GCTAGC 2 cut(s) 3197, 5609
AvaI CYCGRG 1 cut(s) 596
AvaII GGWCC 6 cut(s) 611, 812, 945, 2434, 6598, 7165
BaeGI GKGCMC 3 cut(s) 1315, 5853, 7064
BalI TGGCCA 2 cut(s) 3971, 6705
BanI GGYRCC 1 cut(s) 4790
BanII GRGCYC 4 cut(s) 842, 1230, 2090, 2430
BarI GAAGNNNNNNTAC 2 cut(s) 4837, 4869
BauI CACGAG 3 cut(s) 5385, 6903, 7121
BbsI GAAGAC 5 cut(s) 594, 3597, 3915, 4404, 7238
Bbv12I GWGCWC 5 cut(s) 842, 1230, 2430, 5853, 7064
BbvCI CCTCAGC 2 cut(s) 498, 5604
BceAI ACGGC 5 cut(s) 3, 27, 2991, 6209, 7426
BcgI CGANNNNNNTGC 4 cut(s) 2274, 2308, 7407, 7441
BciT130I CCWGG 7 cut(s) 1304, 1493, 3237, 3973, 4075, 4868, 5795
BciVI GTATCC 1 cut(s) 6094
BclI TGATCA 1 cut(s) 4495
BcuI ACTAGT 4 cut(s) 221, 2588, 3983, 6245
BfoI RGCGCY 2 cut(s) 2713, 3204
BfrI CTTAAG 4 cut(s) 908, 1543, 4633, 7039
BfuAI ACCTGC 3 cut(s) 823, 1642, 3376
BfuI GTATCC 1 cut(s) 6094
BglII AGATCT 4 cut(s) 2869, 3900, 6004, 6310
BlpI GCTNAGC 1 cut(s) 2231
BmcAI AGTACT 2 cut(s) 283, 7224
Bme1390I CCNGG 7 cut(s) 1304, 1493, 3237, 3973, 4075, 4868, 5795
Bme18I GGWCC 6 cut(s) 611, 812, 945, 2434, 6598, 7165
BmeT110I CYCGRG 1 cut(s) 596
BmgT120I GGNCC 6 cut(s) 611, 812, 945, 2434, 6598, 7165
BmiI GGNNCC 7 cut(s) 946, 1961, 2435, 3112, 4275, 4792, 7166
BmrFI CCNGG 7 cut(s) 1304, 1493, 3237, 3973, 4075, 4868, 5795
BmrI ACTGGG 1 cut(s) 2417
BmtI GCTAGC 2 cut(s) 3201, 5613
BmuI ACTGGG 1 cut(s) 2417
BoxI GACNNNNGTC 3 cut(s) 222, 4487, 5814
BpiI GAAGAC 5 cut(s) 594, 3597, 3915, 4404, 7238
BplI GAGNNNNNCTC 2 cut(s) 6356, 6388
BpmI CTGGAG 2 cut(s) 369, 5816
Bpu10I CCTNAGC 5 cut(s) 300, 498, 2262, 2429, 5604
Bpu1102I GCTNAGC 1 cut(s) 2231
Bpu14I TTCGAA 1 cut(s) 3361
Bsa29I ATCGAT 1 cut(s) 4290
BsaAI YACGTR 3 cut(s) 170, 3998, 7534
BsaBI GATNNNNATC 3 cut(s) 744, 4011, 4950
BsaHI GRCGYC 1 cut(s) 7203
BsaI GGTCTC 3 cut(s) 1385, 4678, 4808
BsaWI WCCGGW 1 cut(s) 2240
BsaXI ACNNNNNCTCC 6 cut(s) 1703, 1733, 5030, 5060, 6626, 6656
Bsc4I CCNNNNNNNGG 9 cut(s) 1309, 1401, 1548, 2321, 4784, 5242, 5592, 6982, 7160
Bse118I RCCGGY 1 cut(s) 4028
Bse3DI GCAATG 3 cut(s) 437, 2225, 3627
Bse8I GATNNNNATC 3 cut(s) 744, 4011, 4950
BseBI CCWGG 7 cut(s) 1304, 1493, 3237, 3973, 4075, 4868, 5795
BseCI ATCGAT 1 cut(s) 4290
BseGI GGATG 5 cut(s) 514, 655, 1426, 4951, 7027
BseJI GATNNNNATC 3 cut(s) 744, 4011, 4950
BseLI CCNNNNNNNGG 9 cut(s) 1309, 1401, 1548, 2321, 4784, 5242, 5592, 6982, 7160
BseMI GCAATG 3 cut(s) 437, 2225, 3627
BsePI GCGCGC 1 cut(s) 5437
BseSI GKGCMC 3 cut(s) 1315, 5853, 7064
BseYI CCCAGC 1 cut(s) 1955
BsgI GTGCAG 5 cut(s) 663, 1207, 3404, 3680, 6836
Bsh1236I CGCG 1 cut(s) 5439
BshFI GGCC 7 cut(s) 42, 568, 2384, 2978, 3971, 6705, 7413
BshNI GGYRCC 1 cut(s) 4790
BshVI ATCGAT 1 cut(s) 4290
BsiHKAI GWGCWC 5 cut(s) 842, 1230, 2430, 5853, 7064
BsiHKCI CYCGRG 1 cut(s) 596
BsiSI CCGG 2 cut(s) 2241, 4029
BslFI GGGAC 4 cut(s) 958, 1417, 3667, 7190
BslI CCNNNNNNNGG 9 cut(s) 1309, 1401, 1548, 2321, 4784, 5242, 5592, 6982, 7160
BsmBI CGTCTC 2 cut(s) 165, 5543
BsmFI GGGAC 4 cut(s) 958, 1417, 3667, 7190
BsmI GAATGC 1 cut(s) 2285
BsnI GGCC 7 cut(s) 42, 568, 2384, 2978, 3971, 6705, 7413
Bso31I GGTCTC 3 cut(s) 1385, 4678, 4808
BsoBI CYCGRG 1 cut(s) 596
Bsp119I TTCGAA 1 cut(s) 3361
Bsp1286I GDGCHC 7 cut(s) 842, 1230, 1315, 2090, 2430, 5853, 7064
Bsp1407I TGTACA 2 cut(s) 2191, 4087
Bsp1720I GCTNAGC 1 cut(s) 2231
Bsp19I CCATGG 1 cut(s) 94
BspACI CCGC 8 cut(s) 1418, 1548, 3527, 4794, 6345, 6983, 7277, 7457
BspANI GGCC 7 cut(s) 42, 568, 2384, 2978, 3971, 6705, 7413
BspDI ATCGAT 1 cut(s) 4290
BspFNI CGCG 1 cut(s) 5439
BspHI TCATGA 5 cut(s) 1729, 1984, 2803, 6009, 7441
BspLI GGNNCC 7 cut(s) 946, 1961, 2435, 3112, 4275, 4792, 7166
BspMAI CTGCAG 5 cut(s) 211, 1786, 3255, 4344, 5866
BspMI ACCTGC 3 cut(s) 823, 1642, 3376
BspOI GCTAGC 2 cut(s) 3201, 5613
BspQI GCTCTTC 3 cut(s) 8, 1167, 5541
BspT104I TTCGAA 1 cut(s) 3361
BspT107I GGYRCC 1 cut(s) 4790
BspTI CTTAAG 4 cut(s) 908, 1543, 4633, 7039
BspTNI GGTCTC 3 cut(s) 1385, 4678, 4808
BsrDI GCAATG 3 cut(s) 437, 2225, 3627
BsrFI RCCGGY 1 cut(s) 4028
BsrGI TGTACA 2 cut(s) 2191, 4087
BssAI RCCGGY 1 cut(s) 4028
BssHII GCGCGC 1 cut(s) 5437
BssNI GRCGYC 1 cut(s) 7203
BssSI CACGAG 3 cut(s) 5385, 6903, 7121
BssT1I CCWWGG 6 cut(s) 94, 2385, 3639, 4665, 5586, 6618
Bst2BI CACGAG 3 cut(s) 5385, 6903, 7121
Bst2UI CCWGG 7 cut(s) 1304, 1493, 3237, 3973, 4075, 4868, 5795
Bst6I CTCTTC 9 cut(s) 8, 262, 885, 1125, 1167, 3891, 4013, 5541, 7532
BstACI GRCGYC 1 cut(s) 7203
BstAFI CTTAAG 4 cut(s) 908, 1543, 4633, 7039
BstAPI GCANNNNNTGC 4 cut(s) 4716, 5023, 5308, 5561
BstAUI TGTACA 2 cut(s) 2191, 4087
BstBAI YACGTR 3 cut(s) 170, 3998, 7534
BstBI TTCGAA 1 cut(s) 3361
BstDSI CCRYGG 1 cut(s) 94
BstF5I GGATG 5 cut(s) 514, 655, 1426, 4951, 7027
BstFNI CGCG 1 cut(s) 5439
BstH2I RGCGCY 2 cut(s) 2713, 3204
BstHHI GCGC 6 cut(s) 2712, 3203, 4321, 5439, 5441, 5941
BstNI CCWGG 7 cut(s) 1304, 1493, 3237, 3973, 4075, 4868, 5795
BstNSI RCATGY 8 cut(s) 137, 407, 2573, 3128, 3299, 4252, 6243, 7503
BstPAI GACNNNNGTC 3 cut(s) 222, 4487, 5814
BstSCI CCNGG 7 cut(s) 1302, 1491, 3235, 3971, 4073, 4866, 5793
BstSLI GKGCMC 3 cut(s) 1315, 5853, 7064
BstUI CGCG 1 cut(s) 5439
BstV2I GAAGAC 5 cut(s) 594, 3597, 3915, 4404, 7238
BstX2I RGATCY 9 cut(s) 832, 2869, 3416, 3900, 5596, 6004, 6310, 7116, 7264
BstXI CCANNNNNNTGG 1 cut(s) 6094
BstYI RGATCY 9 cut(s) 832, 2869, 3416, 3900, 5596, 6004, 6310, 7116, 7264
Bsu15I ATCGAT 1 cut(s) 4290
BsuI GTATCC 1 cut(s) 6094
BsuRI GGCC 7 cut(s) 42, 568, 2384, 2978, 3971, 6705, 7413
BsuTUI ATCGAT 1 cut(s) 4290
BtgI CCRYGG 1 cut(s) 94
BtgZI GCGATG 1 cut(s) 6665
BtsCI GGATG 5 cut(s) 514, 655, 1426, 4951, 7027
BtsI GCAGTG 5 cut(s) 91, 651, 4383, 5859, 6085
BveI ACCTGC 3 cut(s) 823, 1642, 3376
CaiI CAGNNNCTG 3 cut(s) 215, 3727, 3845
CciI TCATGA 5 cut(s) 1729, 1984, 2803, 6009, 7441
CfoI GCGC 6 cut(s) 2712, 3203, 4321, 5439, 5441, 5941
Cfr10I RCCGGY 1 cut(s) 4028
Cfr13I GGNCC 6 cut(s) 611, 812, 945, 2434, 6598, 7165
ClaI ATCGAT 1 cut(s) 4290
CsiI ACCWGGT 1 cut(s) 1491
DraI TTTAAA 1 cut(s) 4890
DraIII CACNNNGTG 1 cut(s) 7059
DrdI GACNNNNNNGTC 2 cut(s) 1411, 5963
DseDI GACNNNNNNGTC 2 cut(s) 1411, 5963
EaeI YGGCCR 5 cut(s) 40, 2976, 3969, 6703, 7411
Eam1104I CTCTTC 9 cut(s) 8, 262, 885, 1125, 1167, 3891, 4013, 5541, 7532
EarI CTCTTC 9 cut(s) 8, 262, 885, 1125, 1167, 3891, 4013, 5541, 7532
EciI GGCGGA 1 cut(s) 3542
Ecl136II GAGCTC 3 cut(s) 840, 1228, 2428
Eco130I CCWWGG 6 cut(s) 94, 2385, 3639, 4665, 5586, 6618
Eco147I AGGCCT 2 cut(s) 568, 2384
Eco24I GRGCYC 4 cut(s) 842, 1230, 2090, 2430
Eco31I GGTCTC 3 cut(s) 1385, 4678, 4808
Eco32I GATATC 3 cut(s) 562, 4117, 4952
Eco47I GGWCC 6 cut(s) 611, 812, 945, 2434, 6598, 7165
Eco47III AGCGCT 1 cut(s) 3202
Eco53kI GAGCTC 3 cut(s) 840, 1228, 2428
Eco88I CYCGRG 1 cut(s) 596
EcoICRI GAGCTC 3 cut(s) 840, 1228, 2428
EcoO109I RGGNCCY 2 cut(s) 812, 2434
EcoRI GAATTC 4 cut(s) 364, 2719, 5687, 5917
EcoRII CCWGG 7 cut(s) 1302, 1491, 3235, 3971, 4073, 4866, 5793
EcoRV GATATC 3 cut(s) 562, 4117, 4952
EcoT14I CCWWGG 6 cut(s) 94, 2385, 3639, 4665, 5586, 6618
EcoT22I ATGCAT 1 cut(s) 4596
EcoT38I GRGCYC 4 cut(s) 842, 1230, 2090, 2430
ErhI CCWWGG 6 cut(s) 94, 2385, 3639, 4665, 5586, 6618
Esp3I CGTCTC 2 cut(s) 165, 5543
FaqI GGGAC 4 cut(s) 958, 1417, 3667, 7190
FauI CCCGC 2 cut(s) 1541, 6352
FbaI TGATCA 1 cut(s) 4495
FblI GTMKAC 2 cut(s) 3041, 5228
FokI GGATG 5 cut(s) 521, 662, 1433, 4958, 7034
FriOI GRGCYC 4 cut(s) 842, 1230, 2090, 2430
FspAI RTGCGCAY 1 cut(s) 5940
FspI TGCGCA 1 cut(s) 5940
GlaI GCGC 6 cut(s) 2711, 3202, 4320, 5438, 5440, 5940
GsaI CCCAGC 1 cut(s) 1959
GsuI CTGGAG 2 cut(s) 369, 5816
HaeII RGCGCY 2 cut(s) 2713, 3204
HaeIII GGCC 7 cut(s) 42, 568, 2384, 2978, 3971, 6705, 7413
HapII CCGG 2 cut(s) 2241, 4029
HhaI GCGC 6 cut(s) 2712, 3203, 4321, 5439, 5441, 5941
Hin1I GRCGYC 1 cut(s) 7203
Hin6I GCGC 6 cut(s) 2710, 3201, 4319, 5437, 5439, 5939
HinP1I GCGC 6 cut(s) 2710, 3201, 4319, 5437, 5439, 5939
HincII GTYRAC 5 cut(s) 1338, 1816, 3169, 4161, 4357
HindII GTYRAC 5 cut(s) 1338, 1816, 3169, 4161, 4357
HpaI GTTAAC 2 cut(s) 3169, 4357
HpaII CCGG 2 cut(s) 2241, 4029
HpyCH4IV ACGT 8 cut(s) 169, 1789, 2547, 3997, 5158, 6519, 7203, 7533
HpySE526I ACGT 8 cut(s) 169, 1789, 2547, 3997, 5158, 6519, 7203, 7533
Hsp92I GRCGYC 1 cut(s) 7203
HspAI GCGC 6 cut(s) 2710, 3201, 4319, 5437, 5439, 5939
Ksp22I TGATCA 1 cut(s) 4495
KspAI GTTAAC 2 cut(s) 3169, 4357
LguI GCTCTTC 3 cut(s) 8, 1167, 5541
MabI ACCWGGT 1 cut(s) 1491
MaeII ACGT 8 cut(s) 169, 1789, 2547, 3997, 5158, 6519, 7203, 7533
MfeI CAATTG 4 cut(s) 1284, 2594, 6099, 7007
MflI RGATCY 9 cut(s) 832, 2869, 3416, 3900, 5596, 6004, 6310, 7116, 7264
MhlI GDGCHC 7 cut(s) 842, 1230, 1315, 2090, 2430, 5853, 7064
MlsI TGGCCA 2 cut(s) 3971, 6705
MluNI TGGCCA 2 cut(s) 3971, 6705
MmeI TCCRAC 7 cut(s) 712, 2349, 2643, 4161, 4881, 6286, 6624
Mox20I TGGCCA 2 cut(s) 3971, 6705
Mph1103I ATGCAT 1 cut(s) 4596
MroXI GAANNNNTTC 5 cut(s) 702, 1011, 2670, 3537, 5729
MscI TGGCCA 2 cut(s) 3971, 6705
MslI CAYNNNNRTG 9 cut(s) 1734, 2307, 2574, 3489, 4599, 4788, 5952, 6216, 6935
Msp20I TGGCCA 2 cut(s) 3971, 6705
MspA1I CMGCKG 8 cut(s) 668, 1418, 1668, 4523, 4796, 5867, 6254, 6443
MspCI CTTAAG 4 cut(s) 908, 1543, 4633, 7039
MspI CCGG 2 cut(s) 2241, 4029
MspR9I CCNGG 7 cut(s) 1304, 1493, 3237, 3973, 4075, 4868, 5795
MunI CAATTG 4 cut(s) 1284, 2594, 6099, 7007
Mva1269I GAATGC 1 cut(s) 2285
MvaI CCWGG 7 cut(s) 1304, 1493, 3237, 3973, 4075, 4868, 5795
MvnI CGCG 1 cut(s) 5439
NcoI CCATGG 1 cut(s) 94
NheI GCTAGC 2 cut(s) 3197, 5609
NlaIV GGNNCC 7 cut(s) 946, 1961, 2435, 3112, 4275, 4792, 7166
NsbI TGCGCA 1 cut(s) 5940
NsiI ATGCAT 1 cut(s) 4596
NspI RCATGY 8 cut(s) 137, 407, 2573, 3128, 3299, 4252, 6243, 7503
NspV TTCGAA 1 cut(s) 3361
PaeI GCATGC 3 cut(s) 137, 6243, 7503
PaeR7I CTCGAG 1 cut(s) 596
PagI TCATGA 5 cut(s) 1729, 1984, 2803, 6009, 7441
PauI GCGCGC 1 cut(s) 5437
PceI AGGCCT 2 cut(s) 568, 2384
PciI ACATGT 3 cut(s) 2569, 3124, 3295
PciSI GCTCTTC 3 cut(s) 8, 1167, 5541
PctI GAATGC 1 cut(s) 2285
PdmI GAANNNNTTC 5 cut(s) 702, 1011, 2670, 3537, 5729
PfoI TCCNGGA 1 cut(s) 4073
Ppu21I YACGTR 3 cut(s) 170, 3998, 7534
PpuMI RGGWCCY 2 cut(s) 812, 2434
PscI ACATGT 3 cut(s) 2569, 3124, 3295
PshAI GACNNNNGTC 3 cut(s) 222, 4487, 5814
PsiI TTATAA 1 cut(s) 1931
Psp124BI GAGCTC 3 cut(s) 842, 1230, 2430
Psp1406I AACGTT 1 cut(s) 5158
Psp5II RGGWCCY 2 cut(s) 812, 2434
Psp6I CCWGG 7 cut(s) 1302, 1491, 3235, 3971, 4073, 4866, 5793
PspFI CCCAGC 1 cut(s) 1955
PspGI CCWGG 7 cut(s) 1302, 1491, 3235, 3971, 4073, 4866, 5793
PspN4I GGNNCC 7 cut(s) 946, 1961, 2435, 3112, 4275, 4792, 7166
PspPI GGNCC 6 cut(s) 611, 812, 945, 2434, 6598, 7165
PspPPI RGGWCCY 2 cut(s) 812, 2434
PsrI GAACNNNNNNTAC 2 cut(s) 6654, 6686
PstI CTGCAG 5 cut(s) 211, 1786, 3255, 4344, 5866
PstNI CAGNNNCTG 3 cut(s) 215, 3727, 3845
PsuI RGATCY 9 cut(s) 832, 2869, 3416, 3900, 5596, 6004, 6310, 7116, 7264
PteI GCGCGC 1 cut(s) 5437
PvuII CAGCTG 6 cut(s) 668, 1668, 4523, 5867, 6254, 6443
RseI CAYNNNNRTG 9 cut(s) 1734, 2307, 2574, 3489, 4599, 4788, 5952, 6216, 6935
SacI GAGCTC 3 cut(s) 842, 1230, 2430
SapI GCTCTTC 3 cut(s) 8, 1167, 5541
Sau96I GGNCC 6 cut(s) 611, 812, 945, 2434, 6598, 7165
ScaI AGTACT 2 cut(s) 283, 7224
ScrFI CCNGG 7 cut(s) 1304, 1493, 3237, 3973, 4075, 4868, 5795
SduI GDGCHC 7 cut(s) 842, 1230, 1315, 2090, 2430, 5853, 7064
SexAI ACCWGGT 1 cut(s) 1491
Sfr274I CTCGAG 1 cut(s) 596
SfuI TTCGAA 1 cut(s) 3361
SinI GGWCC 6 cut(s) 611, 812, 945, 2434, 6598, 7165
SlaI CTCGAG 1 cut(s) 596
SmiMI CAYNNNNRTG 9 cut(s) 1734, 2307, 2574, 3489, 4599, 4788, 5952, 6216, 6935
SpeI ACTAGT 4 cut(s) 221, 2588, 3983, 6245
SphI GCATGC 3 cut(s) 137, 6243, 7503
SseBI AGGCCT 2 cut(s) 568, 2384
SsiI CCGC 8 cut(s) 1418, 1548, 3527, 4794, 6345, 6983, 7277, 7457
SspI AATATT 4 cut(s) 457, 1864, 2396, 7150
SstI GAGCTC 3 cut(s) 842, 1230, 2430
StuI AGGCCT 2 cut(s) 568, 2384
StyD4I CCNGG 7 cut(s) 1302, 1491, 3235, 3971, 4073, 4866, 5793
StyI CCWWGG 6 cut(s) 94, 2385, 3639, 4665, 5586, 6618
TaiI ACGT 8 cut(s) 172, 1792, 2550, 4000, 5161, 6522, 7206, 7536
TauI GCSGC 2 cut(s) 4796, 7280
TspGWI ACGGA 2 cut(s) 189, 6029
Vha464I CTTAAG 4 cut(s) 908, 1543, 4633, 7039
VneI GTGCAC 2 cut(s) 5849, 7060
VpaK11BI GGWCC 6 cut(s) 611, 812, 945, 2434, 6598, 7165
XbaI TCTAGA 4 cut(s) 1277, 3091, 4954, 5710
XceI RCATGY 8 cut(s) 137, 407, 2573, 3128, 3299, 4252, 6243, 7503
XcmI CCANNNNNNNNNTGG 1 cut(s) 7072
XhoI CTCGAG 1 cut(s) 596
XmiI GTMKAC 2 cut(s) 3041, 5228
XmnI GAANNNNTTC 5 cut(s) 702, 1011, 2670, 3537, 5729
ZraI GACGTC 1 cut(s) 7204
ZrmI AGTACT 2 cut(s) 283, 7224
Zsp2I ATGCAT 1 cut(s) 4596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.