RchiOBHm_Chr6g0305291

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
64335827 .. 64344320
8494 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ27435

Sequence Viewer

Length: 7500 bp
ATGTCTAAACAGGTTGATGTATCAGCCCAACATGCTTCAGTCGATATTACAGAGGGGAAGGAGTCATTGCCTTCACGGGAAAATATTAAAACATCGTTAATACACAAGAGAGAAGATCAGGAAGCTAAGGGTTTGGATGCAAGGCAGTCTAGTCCTAGTCGTGAAGTAGAAGTGGAGCTTGAAGGAGATAGGCCTCCTGTGTCCAAGCTTGAAAGAAGTCTTGAGTCTTCCTCTAGTCCAGCTTCCTATGTAGATGAGCCAATTGGTGCAGTGGATGAAGCATCTGTGTCAGCTGGTGCAACCATGTTATCAGGCAGGGTAGGAAGAGTTCTGGCGGATACAGGATATCAGGCAGTAGGAGAGAATTGTCATCAAGAACATGTTATTGATGGTTGTGAAAGGGCTTTGGAAACGAATGTGATGAGTTCGGATAGAGGACCTGCATCACTTGTTGCGGATCCGAACTCAATCAGTCTCTCACAGCTCACAGAAGTTATTAAGAGGCTTAATGAAGAAGAGTTCCGTATTCTTCTTAAGTCCATTGAATCAGTTTCTAGTACATTGTTGGGGACCAGCAGTTTATTTGTAGGAGAACATGGCTTTGGAGAAATGTTTGAGCAACTTAAAGAAGAATTGGTTCTCACAAATTTCACCAAAGATGTCTTTCACTTGCAGATTGAACAGCAGTTTGAGATGCAACTAGAGTTTGATTGCCAGCATCATCGGTTGCTTGATGAAACATCTCTTCTTCGTGCTTCACTGAATGAAGTTCGTGAGAAGAACCAGTGTCTTGCTGAAGAGCTTGCACAGTGCAGGGGGGAACTCCAAGCTGTTGCTTGTGGGAAGGAGGAGCTCCAAAACAAATTTCATACTGCGAAGGTGGAGGGTGAAGAAGCTTCTTCTAGAACAATTGAGTTGCATAACAACCTGGAAAGGGCACAGCAGGATTTGTTCAGACTGTCAACAGAGTTAGCTGATTGTAAAGGTTTGGTGCAAGCTTTACAGGTGGAAAATGAGACCTTAAATGGGACTATACTGTCAGTGGATGAAGTTAAAAGTAAACATATGGAGCAAAATAATTTGTATCTTCTTGAGAAGGAGAAGCTTTCAACTGACCTGGTTGATCGTGAAAGTTTAGTGGCAACTCTACAGGGTCAAATATCAACCTTAAGCGGGAATTTGGATTCAGTAACACATGAGAGGGAGCATCTTTCTTGTGAAAATGAGAAACTTGCAACAGAACTGGCTGACAGTAAGAATATAGTATCAGCTTTGCAGGTAGAAAATGCCAGCTTGAATGGGAGTCTTGCTTTGGTTATGGAGGAGAAAAAGAAGCTTGAGGAGGAGAGGGAGTATTCTGCTCATGAGAATGAGAGACTTTCAGCCGAACTTGTTGTTCTTCAAGAACGGTTATCTGCAGAACGTGAAGAACAAGTAAGGTTTGAGGTTGACCTAAAAGAAACAACAAAATGCCTAGAACAGCTCACTGATGAAAAGATCTCTCTTACTAGCAATCTGGACATACTTAAAGCTAAGATGAGTGAGGTTGAAAAGAGTGGGTTTATAATACCAGCTCAAGTTGGGGAAGCTGGGAACCAAGTTGAACTTAGCAGGGGTCATGATCTTGCAGCTGAAGATGATAATTCTCAGCAAATTCACAGGAAGCAAGACAGTGACGCTTCCTTTGTGCTGGATAAATCTTTATCTGATGGCTGTGTAGGGGGCTCACCATTTGTGAATACTGAGCAGGAAGTCTTTGATGATTCCGATGGGTTTATCGCACTGAATGGACACTTGGACAAGGCAGATAAAATGTTGCATAAACTTGTACAGGAAGTTGAAAGCATCTGCTCTCATTCCACATTGCTAAGCAAGTCAGGTCACAAAGTTCCTGTAGCTCAGGTATCAAAACTGATTCAAGCATTCGAGTCGAAGGCTCATCAAGATGAGCCAGTAGATGGGGAAGCTCTAACCGATAATCAATCACCAGAGGATTCAGTTGTGTCGGTAAGAGAGCAAATCGGAAAACTGAGAGCATTATTTAAGCAGATGCTGATGGATACTGCAAATGCCAGTCTACTGCTGAAGGAGGAGCGAGATGGTAGGAAAAATGCTGATGCCACCTCTGAGGAATTGAAGGATCAGAATGGGGCCTTGGAAGAATATTGCAAGAAACTGGGAGCAACGAACATTGAGCTCAGGGTCCTATATGAAGCTTTAGAAGAACATAGGGGAATCATTGAATCTAGGAACTGTGACCTTTTCATTCTCTCCGAATCCTTACGACTACAAGTCACCAATCTTAAAGTAGAAAACGTGGAAGCTGACAGAAAGCTACATGTGTATGAATCAAGAACTAGTCAATTGCAGAGTCGGTTGCATGATCTACATCTAATTTCAAATGTTATGGTATCTCAAACCTCTGAGCAGTTGGAAAGTTTTCACAAGGAGCCTGCAGAGAAAGTTTTGATACTTGAGCGCCATTGGAATTCAACTATTGATCCGGTTCTTGAAGCAACTGACAAGCTTGATGAATCTCAAAACTCTCATGATTCTTTTGACAGTTCTGTTGCTTCTGTTTATGATGCCATCAGTTTTATTCAAGATCTGAAGGACAAACTTGAAAGTTCTCAAACAGAACATGAAGCAGTCTTTTCTTTATACAAAGAAGCGAATGAGAAATGCGATGATCTGCATGGAAAGAATCAAATGGCCAGTGACTTGTTGCAGAAGTTGTATGGCAACCTTTCTAAACTACTCACGGTTTTGCATGGGTCTACAAATGAAAGTGATATGTACTTAGAACCTGAGAAGCTTCCTGATCTTCTAGATTACAGTAATTATGGAACCATCATAGAACATGTGGAATCTTCTTTGAGGTGGAGTCTGCAACTTGAATCTGTTAACAAGAAACTAAATTCAGAGTTGATGGCTAGCGCTGAAGAAGTTGAGGAACTGAAACAAAGATGCCTTGGTTCTACTACTCTGCAAAAGTTAATAGAACATGTTGAAGGGGTGCTGAAAGTGGAACATGCTGAGTTTCAAGTGGATAAAACCCCTGCTTCACACCTTGAATCACTGGTGTCATGTCTTGTTCGAAAATGCGAGGAGGCTGATGTGCAGGTAGACTTATCTAAGGAAGAAGATTCTGGATCTAAGGTGGTGGAGCTGACTTCAATGCAGGAAGAAGTACAGCAGTTAAATGCCTTGTGTCTCAAGCATGAAAGTGAACTCATTGTTCTAAGGGAAAGTTTACATCAGGCAGAGGAAGCACTTCTTGTTGCTCGTTCTGAGATACAAGGGAAAGTAAATGAACTTGAACAGTCAGAGCAACGGGTGTCTTCCCTTAGAGAGAAGCTTACCATTGCTGTCACCAAGGGGAAAGGTTTGGTTGTGCAGCGAGATGGTCTGAAGCAGTCCCTTAACGAGAAATATGTTGAACTGGAAAGATTCTCACAGGAACTGCAAATGAAAGATGCAAGGCTTCTTGAGATTGAAGCAAAACTTGAGGCATTTTCAGAGTCAGGTGAACGAGTGGAAGCTCTGGAATCTGAGCTTTCATATATTCGCAATTCAGCTACTGCATTAAGAGAATCATTCCTTCTCAAAGATTCTGTCCTTCAGAGAATAGAAGAGATCTTGGAAGACCTTGATCTGCCAGAACATTTTTATTCAAGAGATATTATTGAGAAGATTGATTGGCTGGCCAGGACAGCTACTAGTAACACTTTGCATGTGACTGATTCAGATCAGAAGAGTTCTGCCGGTGGAGGTTCATACTCTGATGCTGGTTTTGTTGTTATGGATTCCTGGAAAGATGATGTACAGCCAAGTTCAGATTCAAGTGAAGATATCAAAAGAAAATATGATGAACTAAAGATTAGATTTTATGGGTTGACTGAACAGAATGAAATGTTGGAAAAATCCTTAATGGCAAGGAACAACATAGTAAAGAGATGGGAGGAACTTTTGGACAGGATCGACATGCCACCACATCTGCGATCTGTGGAGCCAAAGGATAGGATCGATTGGTTAAGCAAAGCACTTTTAGAAGCGCAGGAAGATAATATGTCTCTGCAGCAGAAGGTTGTTAACCTTGAAAACCACTGTGTATCACTCACTGCTGATTTGGAAGACTCGCAAAGGGGAGTGTCTGACCTTGAGGCAGACCTTCAAAGATTTATCCACAAGAGAGATTATCTTTCCGAAAGATTGGAGACTCTGGTCAATGATCAGGAGAAGCTTTCAACCAAGGCAGTTGAATTTGAGCTTGAGAATGAAAAGCTGCAGAAGGAAGTTACTGATTTGCAAGAAAATGTAGCCAAGATGCATGGAAATGAGAATCAAATTCTCAGCATAGAAGCCGACTTAAGAAGATTACAGAGTTTGGTTACTGATGCCTTGGAGGTCTCTGGATCAAAGTATAAGTATTCTGGTGGTAGTAGCATTGAGTGCTTGGAAGGGTTACTGAATAAGCTTTTAGAGAGTTATGCAACTCTTTACTCGGAAAAACCTGTGCATGGGGGTGCCGCTGAAGGTCTCCATACTGAATATGCTGATGCAACAGTTATTGGATCAAGAAGCCTAAATACACTTGGTTCCCAGGAATCAGATGTAGATGTTTTAAAGAAAGAGTTGGAGGAAGTTCAACATGAACTTTTGGGTGTGAAGGAGGAGAGGGATGGATATCTAGAGAAGCAACAGTCTATGGCTAGTGAATTTGAAGCATTACATAACAAAGTGAATGAGTTGCAAGGGCTGCTTAATCAAGAGGAGCAGAAGTTAGCTTCTGTTAGAGAGAAGTTAAATGTTGCAGTCAGAAAAGGGAAGTCATTGGTACAACAGCGTGACAGTCTGAAACAAAGTATTGATGAGGTCAATTCTGAGGTCGAACGTTTGAGATCAGAGATCAAGATGGGGCAAGTTAAAATTGCAGAGTATGAACAAAACTTCAGGGATTTGTCTACTTACCCTAGCAGGGTAGAAGCCTTAGAATCTGAGACATTGTTCTTGAGGAATTGTTTGAATGAAACTGAGCAGAATTTGCAGCACAAAGAAAATACTTTGAGCATGATTGTAAATATCTTAGACAAAATTGATGTAGGAGGCGATTTTAACTCTCGTGATCCAGTTGTGAAGTTAGAACAAATTGGGAAAATGTGCTTTGATTTGCGCGCTGATGTAGCTTCTTCTGAGCAAGAGGCTAGGAAATCCAAAAGAGCAGCAGAGCTACTCCTTGCAGAACTGAATGAGGTTCAAGAGAGGAATGATGGTCTCCAAGAAGAGCTTGCAAAATCTGCTGATGAAATTTCTGTACTCTCCAAGGAAAGGGATCTTGCTGAGGCTAGCAAACTTGAAGCTGTTTTAAGTCTTGAAAAGCTATCTACTGCTCACTCCGAGGAAAGAAAAGACCAATTTTCTGAATTTGCAGGACTGAAATCTGGTCTAGATCAACTCAGGAAGGGTTTCCATGATATTAGCAATTCATTAGCCGATATTTTTTACAACGACTTGGAATTTTTGAACAACCTGGAGGAGTGTCTCAAATTAAATAGTGCTAATGTGGTTGATGTGCACCCCTTCACTGCAGCTGGTGGATTTCTAACGAGCAAATCAGATAAGGATAACTCTATTTCAATGAATTCTAGGTCAGACACCAATGCGCATGGACATTTTGGTGACAGTTTTGTCATTGAAACCTTTACATACACAACACATTATGTGCAAGAGCTCATGACGGAGATTGGTGTGCTTAAAGAAAAATTAGATGAACACTCAATGTCTTTGCATGAAAAATCTAGCAGTGTATCCAGATTGGTGGCAATTGTTTGTGGAGAGATAACTTCCAAAAACGAGTCATTTGAAGCCTTGAGGAGAGACTTTTTGCAGATGGAAATGGTCAAAAAGGAAAAGGACAAGGAACTTGTTGTCTTGCATAGAAATGCTGCTGTGCTTTTTGAAGCATGCACTAGTTCAGCTGTGAAAATAAATAGAAGAAAAGATGAATTGGTGGGAAATAGTTGGGCTGTTGGAGATCTGGGAATGACATCAAAACCAACAGAATTGCCCGCTTTCAGTGGAGAGGGTCAGCTTTACTCTGAGGAATCTGTTAGGTCTGTGGCAGACAGGCTTTTGTCGGCTGCTAGTGATTTTGCTACTCTGACAGCTGAAATAGTTGAAGGTAGCCAAAAGGAAATGAAGCTTACCATTTCAAATTTGCAGAAAGAGCTTCAGGAGAAGGACGTTCAAAAGGAGAGGATTTTCATGGAGCTTGTAAGTCAAATCAAGGAAGCTGAAGCTACTGCAAGCAGCTATTCAGTGGACCTTGAATCTTCAAAAACCTTGGTGCATGATTTGGAGAAACAGTTGGAAGCGATGAAAGGTGAACGTAACTTATTTGAGCAGCGAGTAAAGGAGCTAGAAGATGGCCCTGACGAGTTACAACAGAGGGTCAGAACACTAACTGATGTGCTTGCTGCCAAAGACCATGAAATTGAGAAGCTAATGCAAGCACTTGATGAGGAGGAGGAACAGATGCAAGGTATCACCTTCAAGATCAAGGAACTGGAAAAGATTGTGGAACAAAAGAACCTAGATTTAGAGAACCTTGAAGCTTCTCGTGGGAAGGTTATGAAAAAGCTCTCCATCACTGTGTATAAGTTTGACGAGCTGCATCACCTGTCTGCAAGCCTCCTTGCGGAAGTTGAAAAATTGCAGTCACTATTGCAAGATCGGGATGCAGAGATTTCTTTCTTAAGACAGGAGGTCACTAGGTGCGCCAATGATGTTCTGGTTGCATCACAAGTCAGTAAGAAGGGAAATTCAGATGAGATCCACGAGTTATTAACATGGTTTGATATGAATATTGCTGCATTTGGGGTCCACAGTGAGTATCTTGAAAATAAGAACAACAGTGACGTCCCTGAACAAAAGGAAGTACTCAAGAAGACAGTTGATTCAATTTTATCAGAATTAGGGGATCTACGGGCTGCGGCTCAAAGCAAAGATATATTGTTGCAAGAAGAAAGGACTAAGGTAGAAGAATTAACACACAAGGGTCAGACTCTTGAGGAGTGTTTACGGGAGAAGGAATCACGATTAAATCTGCTTGAAGGTGTGGAAGACGGCCAAGCAACTAGCTCGACCTCAAAGATTCATGAAGTTGAGCCTGCGATAAACAAATGGGAAGCATCTGGTTCCTCCATTGCATCTCAAGTCCGTAGTTTGCGCAAAGGCAACAGTGAGCAAGTTGCAATTGCCATAGATATGGATCCTGGGAGCACTAGCAAATTGGAAGATGAAGAAGATGATAAGGTTCATGGTTTCAAGTCACTCACTACATCAAGAATGGTTCCTAGATGTACAAGACCTATGAGTGACATGGTCGATGGCCTCTGGGTTTCTTGTGATCGGACTCTAATGCGACAACCAATTTTGCGGCTTGGTATTATGTTCTATTGGGCCTTTTTGCATACGCTTCTTGCTAGTCTTGCAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2499

Amino Acids

281.1

Weight (kDa)

4.81

Isoelectric Point (pI)

48.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1565
AasI GACNNNNNNGTC 2 cut(s) 1036, 5687
AatII GACGTC 1 cut(s) 6921
Acc16I TGCGCA 2 cut(s) 5664, 7229
Acc36I ACCTGC 3 cut(s) 448, 1267, 3112
AccB1I GGYRCC 1 cut(s) 4526
AccB7I CCANNNNNTGG 1 cut(s) 1958
AccI GTMKAC 4 cut(s) 2077, 2777, 3126, 4964
AccII CGCG 1 cut(s) 5175
AciI CCGC 8 cut(s) 335, 455, 1173, 4530, 6069, 6698, 6992, 7438
AclI AACGTT 1 cut(s) 4894
AcoI YGGCCR 3 cut(s) 2712, 3705, 7126
AcyI GRCGYC 1 cut(s) 6918
AdeI CACNNNGTG 1 cut(s) 6774
AfaI GTAC 9 cut(s) 559, 1830, 2798, 3192, 3825, 4839, 5316, 6939, 7363
AfeI AGCGCT 1 cut(s) 2938
AfiI CCNNNNNNNGG 8 cut(s) 934, 1026, 1173, 1958, 4520, 4978, 5328, 6697
AflII CTTAAG 4 cut(s) 533, 1168, 4369, 6754
AflIII ACRYGT 4 cut(s) 379, 2338, 2860, 3004
AhdI GACNNNNNGTC 2 cut(s) 2291, 6764
AhlI ACTAGT 3 cut(s) 2357, 3719, 5969
AjnI CCWGG 7 cut(s) 927, 1116, 3707, 3809, 4602, 5529, 7273
Alw21I GWGCWC 5 cut(s) 855, 2199, 5577, 5733, 7283
Alw44I GTGCAC 1 cut(s) 5573
AlwNI CAGNNNCTG 3 cut(s) 2053, 3463, 3581
Aor51HI AGCGCT 1 cut(s) 2938
AoxI GGCC 8 cut(s) 191, 2151, 2712, 3705, 6427, 7126, 7390, 7461
ApaLI GTGCAC 1 cut(s) 5573
ArsI GACNNNNNNTTYG 4 cut(s) 1667, 1699, 3600, 3632
Asp700I GAANNNNTTC 4 cut(s) 636, 2439, 3273, 5465
AspLEI GCGC 8 cut(s) 2481, 2939, 4057, 5175, 5177, 5665, 6779, 7230
AspS9I GGNCC 8 cut(s) 437, 570, 2151, 2203, 6322, 6428, 6880, 7461
AsuII TTCGAA 1 cut(s) 3097
AsuNHI GCTAGC 2 cut(s) 2933, 5345
AvaII GGWCC 5 cut(s) 437, 570, 2203, 6322, 6880
BaeGI GKGCMC 2 cut(s) 940, 5577
BalI TGGCCA 2 cut(s) 2714, 3707
BamHI GGATCC 2 cut(s) 457, 7270
BanI GGYRCC 1 cut(s) 4526
BanII GRGCYC 4 cut(s) 855, 1727, 2199, 5733
BarI GAAGNNNNNNTAC 2 cut(s) 4573, 4605
BauI CACGAG 3 cut(s) 5121, 6618, 6836
BbsI GAAGAC 6 cut(s) 219, 3333, 3651, 4140, 6953, 7128
Bbv12I GWGCWC 5 cut(s) 855, 2199, 5577, 5733, 7283
BbvCI CCTCAGC 1 cut(s) 5340
BceAI ACGGC 1 cut(s) 7141
BcgI CGANNNNNNTGC 4 cut(s) 1911, 1945, 7122, 7156
BciT130I CCWGG 7 cut(s) 929, 1118, 3709, 3811, 4604, 5531, 7275
BciVI GTATCC 3 cut(s) 331, 2053, 5818
BclI TGATCA 1 cut(s) 4231
BcuI ACTAGT 3 cut(s) 2357, 3719, 5969
BfmI CTRYAG 7 cut(s) 1148, 1416, 1893, 2454, 4076, 4286, 5586
BfoI RGCGCY 2 cut(s) 2482, 2940
BfrI CTTAAG 4 cut(s) 533, 1168, 4369, 6754
BfuAI ACCTGC 3 cut(s) 448, 1267, 3112
BfuI GTATCC 3 cut(s) 331, 2053, 5818
BglII AGATCT 4 cut(s) 1497, 2605, 3636, 6034
BlpI GCTNAGC 1 cut(s) 1868
BmcAI AGTACT 1 cut(s) 6939
Bme1390I CCNGG 7 cut(s) 929, 1118, 3709, 3811, 4604, 5531, 7275
Bme18I GGWCC 5 cut(s) 437, 570, 2203, 6322, 6880
BmeRI GACNNNNNGTC 2 cut(s) 2291, 6764
BmgT120I GGNCC 8 cut(s) 437, 570, 2151, 2203, 6322, 6428, 6880, 7461
BmrFI CCNGG 7 cut(s) 929, 1118, 3709, 3811, 4604, 5531, 7275
BmrI ACTGGG 1 cut(s) 2186
BmtI GCTAGC 2 cut(s) 2937, 5349
BmuI ACTGGG 1 cut(s) 2186
BoxI GACNNNNGTC 1 cut(s) 4223
BpiI GAAGAC 6 cut(s) 219, 3333, 3651, 4140, 6953, 7128
BplI GAGNNNNNCTC 2 cut(s) 215, 247
BpmI CTGGAG 1 cut(s) 5552
Bpu10I CCTNAGC 4 cut(s) 126, 1899, 2198, 5340
Bpu1102I GCTNAGC 1 cut(s) 1868
Bpu14I TTCGAA 1 cut(s) 3097
Bsa29I ATCGAT 1 cut(s) 4026
BsaBI GATNNNNATC 4 cut(s) 2388, 3747, 4686, 7269
BsaHI GRCGYC 1 cut(s) 6918
BsaI GGTCTC 4 cut(s) 1010, 4414, 4544, 5279
BsaWI WCCGGW 1 cut(s) 2503
BsaXI ACNNNNNCTCC 6 cut(s) 1337, 1367, 4766, 4796, 6350, 6380
Bsc4I CCNNNNNNNGG 8 cut(s) 934, 1026, 1173, 1958, 4520, 4978, 5328, 6697
Bse118I RCCGGY 1 cut(s) 3764
Bse3DI GCAATG 4 cut(s) 65, 1862, 3363, 7203
Bse8I GATNNNNATC 4 cut(s) 2388, 3747, 4686, 7269
BseBI CCWGG 7 cut(s) 929, 1118, 3709, 3811, 4604, 5531, 7275
BseCI ATCGAT 1 cut(s) 4026
BseGI GGATG 5 cut(s) 142, 280, 1051, 4687, 6742
BseJI GATNNNNATC 4 cut(s) 2388, 3747, 4686, 7269
BseLI CCNNNNNNNGG 8 cut(s) 934, 1026, 1173, 1958, 4520, 4978, 5328, 6697
BseMI GCAATG 4 cut(s) 65, 1862, 3363, 7203
BsePI GCGCGC 1 cut(s) 5173
BseSI GKGCMC 2 cut(s) 940, 5577
BseYI CCCAGC 1 cut(s) 1589
BsgI GTGCAG 4 cut(s) 288, 832, 3140, 3416
Bsh1236I CGCG 1 cut(s) 5175
BshFI GGCC 8 cut(s) 193, 2153, 2714, 3707, 6429, 7128, 7392, 7463
BshNI GGYRCC 1 cut(s) 4526
BshVI ATCGAT 1 cut(s) 4026
BsiHKAI GWGCWC 5 cut(s) 855, 2199, 5577, 5733, 7283
BsiSI CCGG 2 cut(s) 2504, 3765
BslFI GGGAC 4 cut(s) 583, 1042, 3403, 6905
BslI CCNNNNNNNGG 8 cut(s) 934, 1026, 1173, 1958, 4520, 4978, 5328, 6697
BsmFI GGGAC 4 cut(s) 583, 1042, 3403, 6905
BsmI GAATGC 1 cut(s) 1922
BsnI GGCC 8 cut(s) 193, 2153, 2714, 3707, 6429, 7128, 7392, 7463
Bso31I GGTCTC 4 cut(s) 1010, 4414, 4544, 5279
Bsp119I TTCGAA 1 cut(s) 3097
Bsp1286I GDGCHC 7 cut(s) 855, 940, 1727, 2199, 5577, 5733, 7283
Bsp1407I TGTACA 3 cut(s) 1828, 3823, 7361
Bsp1720I GCTNAGC 1 cut(s) 1868
BspACI CCGC 8 cut(s) 335, 455, 1173, 4530, 6069, 6698, 6992, 7438
BspANI GGCC 8 cut(s) 193, 2153, 2714, 3707, 6429, 7128, 7392, 7463
BspDI ATCGAT 1 cut(s) 4026
BspFNI CGCG 1 cut(s) 5175
BspHI TCATGA 5 cut(s) 1363, 1618, 2548, 5733, 7156
BspMAI CTGCAG 5 cut(s) 1420, 2458, 4080, 4290, 5590
BspMI ACCTGC 3 cut(s) 448, 1267, 3112
BspOI GCTAGC 2 cut(s) 2937, 5349
BspQI GCTCTTC 2 cut(s) 792, 5277
BspT104I TTCGAA 1 cut(s) 3097
BspT107I GGYRCC 1 cut(s) 4526
BspTI CTTAAG 4 cut(s) 533, 1168, 4369, 6754
BspTNI GGTCTC 4 cut(s) 1010, 4414, 4544, 5279
BsrDI GCAATG 4 cut(s) 65, 1862, 3363, 7203
BsrFI RCCGGY 1 cut(s) 3764
BsrGI TGTACA 3 cut(s) 1828, 3823, 7361
BssAI RCCGGY 1 cut(s) 3764
BssHII GCGCGC 1 cut(s) 5173
BssNI GRCGYC 1 cut(s) 6918
BssSI CACGAG 3 cut(s) 5121, 6618, 6836
BssT1I CCWWGG 7 cut(s) 2154, 2971, 3375, 4251, 4401, 5322, 6342
Bst2BI CACGAG 3 cut(s) 5121, 6618, 6836
Bst2UI CCWGG 7 cut(s) 929, 1118, 3709, 3811, 4604, 5531, 7275
Bst6I CTCTTC 7 cut(s) 319, 510, 750, 792, 3627, 3749, 5277
BstACI GRCGYC 1 cut(s) 6918
BstAFI CTTAAG 4 cut(s) 533, 1168, 4369, 6754
BstAPI GCANNNNNTGC 4 cut(s) 4452, 4759, 5044, 5297
BstAUI TGTACA 3 cut(s) 1828, 3823, 7361
BstBI TTCGAA 1 cut(s) 3097
BstF5I GGATG 5 cut(s) 142, 280, 1051, 4687, 6742
BstFNI CGCG 1 cut(s) 5175
BstH2I RGCGCY 2 cut(s) 2482, 2940
BstHHI GCGC 8 cut(s) 2481, 2939, 4057, 5175, 5177, 5665, 6779, 7230
BstNI CCWGG 7 cut(s) 929, 1118, 3709, 3811, 4604, 5531, 7275
BstNSI RCATGY 9 cut(s) 35, 383, 2342, 2864, 3008, 3035, 3737, 3988, 5967
BstPAI GACNNNNGTC 1 cut(s) 4223
BstSCI CCNGG 7 cut(s) 927, 1116, 3707, 3809, 4602, 5529, 7273
BstSFI CTRYAG 7 cut(s) 1148, 1416, 1893, 2454, 4076, 4286, 5586
BstSLI GKGCMC 2 cut(s) 940, 5577
BstUI CGCG 1 cut(s) 5175
BstV2I GAAGAC 6 cut(s) 219, 3333, 3651, 4140, 6953, 7128
BstXI CCANNNNNNTGG 2 cut(s) 5818, 7267
Bsu15I ATCGAT 1 cut(s) 4026
BsuI GTATCC 3 cut(s) 331, 2053, 5818
BsuRI GGCC 8 cut(s) 193, 2153, 2714, 3707, 6429, 7128, 7392, 7463
BsuTUI ATCGAT 1 cut(s) 4026
BtgZI GCGATG 2 cut(s) 2700, 6389
BtsCI GGATG 5 cut(s) 142, 280, 1051, 4687, 6742
BtsI GCAGTG 4 cut(s) 276, 4119, 5583, 5809
BveI ACCTGC 3 cut(s) 448, 1267, 3112
CaiI CAGNNNCTG 3 cut(s) 2053, 3463, 3581
CciI TCATGA 5 cut(s) 1363, 1618, 2548, 5733, 7156
CfoI GCGC 8 cut(s) 2481, 2939, 4057, 5175, 5177, 5665, 6779, 7230
Cfr10I RCCGGY 1 cut(s) 3764
Cfr13I GGNCC 8 cut(s) 437, 570, 2151, 2203, 6322, 6428, 6880, 7461
ClaI ATCGAT 1 cut(s) 4026
CseI GACGC 1 cut(s) 1685
CsiI ACCWGGT 1 cut(s) 1116
Csp6I GTAC 9 cut(s) 558, 1829, 2797, 3191, 3824, 4838, 5315, 6938, 7362
CviQI GTAC 9 cut(s) 558, 1829, 2797, 3191, 3824, 4838, 5315, 6938, 7362
DraI TTTAAA 1 cut(s) 4626
DraIII CACNNNGTG 1 cut(s) 6774
DrdI GACNNNNNNGTC 2 cut(s) 1036, 5687
DriI GACNNNNNGTC 2 cut(s) 2291, 6764
DseDI GACNNNNNNGTC 2 cut(s) 1036, 5687
EaeI YGGCCR 3 cut(s) 2712, 3705, 7126
Eam1104I CTCTTC 7 cut(s) 319, 510, 750, 792, 3627, 3749, 5277
Eam1105I GACNNNNNGTC 2 cut(s) 2291, 6764
EarI CTCTTC 7 cut(s) 319, 510, 750, 792, 3627, 3749, 5277
EciI GGCGGA 1 cut(s) 350
Ecl136II GAGCTC 3 cut(s) 853, 2197, 5731
Eco130I CCWWGG 7 cut(s) 2154, 2971, 3375, 4251, 4401, 5322, 6342
Eco147I AGGCCT 1 cut(s) 193
Eco24I GRGCYC 4 cut(s) 855, 1727, 2199, 5733
Eco31I GGTCTC 4 cut(s) 1010, 4414, 4544, 5279
Eco32I GATATC 3 cut(s) 347, 3853, 4688
Eco47I GGWCC 5 cut(s) 437, 570, 2203, 6322, 6880
Eco47III AGCGCT 1 cut(s) 2938
Eco53kI GAGCTC 3 cut(s) 853, 2197, 5731
EcoICRI GAGCTC 3 cut(s) 853, 2197, 5731
EcoO109I RGGNCCY 3 cut(s) 437, 2151, 2203
EcoRI GAATTC 2 cut(s) 2488, 5641
EcoRII CCWGG 7 cut(s) 927, 1116, 3707, 3809, 4602, 5529, 7273
EcoRV GATATC 3 cut(s) 347, 3853, 4688
EcoT14I CCWWGG 7 cut(s) 2154, 2971, 3375, 4251, 4401, 5322, 6342
EcoT22I ATGCAT 1 cut(s) 4332
EcoT38I GRGCYC 4 cut(s) 855, 1727, 2199, 5733
ErhI CCWWGG 7 cut(s) 2154, 2971, 3375, 4251, 4401, 5322, 6342
FaqI GGGAC 4 cut(s) 583, 1042, 3403, 6905
FauI CCCGC 2 cut(s) 1166, 6076
FauNDI CATATG 1 cut(s) 1065
FbaI TGATCA 1 cut(s) 4231
FblI GTMKAC 4 cut(s) 2077, 2777, 3126, 4964
FokI GGATG 5 cut(s) 149, 287, 1058, 4694, 6749
FriOI GRGCYC 4 cut(s) 855, 1727, 2199, 5733
FspAI RTGCGCAY 1 cut(s) 5664
FspI TGCGCA 2 cut(s) 5664, 7229
GlaI GCGC 8 cut(s) 2480, 2938, 4056, 5174, 5176, 5664, 6778, 7229
GsaI CCCAGC 1 cut(s) 1593
GsuI CTGGAG 1 cut(s) 5552
HaeII RGCGCY 2 cut(s) 2482, 2940
HaeIII GGCC 8 cut(s) 193, 2153, 2714, 3707, 6429, 7128, 7392, 7463
HapII CCGG 2 cut(s) 2504, 3765
HgaI GACGC 1 cut(s) 1685
HhaI GCGC 8 cut(s) 2481, 2939, 4057, 5175, 5177, 5665, 6779, 7230
Hin1I GRCGYC 1 cut(s) 6918
Hin6I GCGC 8 cut(s) 2479, 2937, 4055, 5173, 5175, 5663, 6777, 7228
HinP1I GCGC 8 cut(s) 2479, 2937, 4055, 5173, 5175, 5663, 6777, 7228
HincII GTYRAC 5 cut(s) 963, 1450, 2905, 3897, 4093
HindII GTYRAC 5 cut(s) 963, 1450, 2905, 3897, 4093
HpaI GTTAAC 2 cut(s) 2905, 4093
HpaII CCGG 2 cut(s) 2504, 3765
HpyCH4IV ACGT 6 cut(s) 1423, 2316, 4894, 6243, 6388, 6918
HpySE526I ACGT 6 cut(s) 1423, 2316, 4894, 6243, 6388, 6918
Hsp92I GRCGYC 1 cut(s) 6918
HspAI GCGC 8 cut(s) 2479, 2937, 4055, 5173, 5175, 5663, 6777, 7228
Ksp22I TGATCA 1 cut(s) 4231
KspAI GTTAAC 2 cut(s) 2905, 4093
LguI GCTCTTC 2 cut(s) 792, 5277
MabI ACCWGGT 1 cut(s) 1116
MaeII ACGT 6 cut(s) 1423, 2316, 4894, 6243, 6388, 6918
MfeI CAATTG 5 cut(s) 261, 909, 2363, 5823, 7254
MhlI GDGCHC 7 cut(s) 855, 940, 1727, 2199, 5577, 5733, 7283
MlsI TGGCCA 2 cut(s) 2714, 3707
MluNI TGGCCA 2 cut(s) 2714, 3707
MmeI TCCRAC 5 cut(s) 2412, 3897, 4617, 6010, 6348
Mox20I TGGCCA 2 cut(s) 2714, 3707
Mph1103I ATGCAT 1 cut(s) 4332
MroXI GAANNNNTTC 4 cut(s) 636, 2439, 3273, 5465
MscI TGGCCA 2 cut(s) 2714, 3707
Msp20I TGGCCA 2 cut(s) 2714, 3707
MspA1I CMGCKG 6 cut(s) 293, 1631, 4532, 5591, 5978, 6167
MspCI CTTAAG 4 cut(s) 533, 1168, 4369, 6754
MspI CCGG 2 cut(s) 2504, 3765
MspR9I CCNGG 7 cut(s) 929, 1118, 3709, 3811, 4604, 5531, 7275
MunI CAATTG 5 cut(s) 261, 909, 2363, 5823, 7254
Mva1269I GAATGC 1 cut(s) 1922
MvaI CCWGG 7 cut(s) 929, 1118, 3709, 3811, 4604, 5531, 7275
MvnI CGCG 1 cut(s) 5175
NdeI CATATG 1 cut(s) 1065
NheI GCTAGC 2 cut(s) 2933, 5345
NsbI TGCGCA 2 cut(s) 5664, 7229
NsiI ATGCAT 1 cut(s) 4332
NspI RCATGY 9 cut(s) 35, 383, 2342, 2864, 3008, 3035, 3737, 3988, 5967
NspV TTCGAA 1 cut(s) 3097
PaeI GCATGC 1 cut(s) 5967
PagI TCATGA 5 cut(s) 1363, 1618, 2548, 5733, 7156
PauI GCGCGC 1 cut(s) 5173
PceI AGGCCT 1 cut(s) 193
PciI ACATGT 4 cut(s) 379, 2338, 2860, 3004
PciSI GCTCTTC 2 cut(s) 792, 5277
PctI GAATGC 1 cut(s) 1922
PdmI GAANNNNTTC 4 cut(s) 636, 2439, 3273, 5465
PflFI GACNNNGTC 1 cut(s) 7382
PflMI CCANNNNNTGG 1 cut(s) 1958
PfoI TCCNGGA 1 cut(s) 3809
PpuMI RGGWCCY 2 cut(s) 437, 2203
PscI ACATGT 4 cut(s) 379, 2338, 2860, 3004
PshAI GACNNNNGTC 1 cut(s) 4223
PsiI TTATAA 1 cut(s) 1565
Psp124BI GAGCTC 3 cut(s) 855, 2199, 5733
Psp1406I AACGTT 1 cut(s) 4894
Psp5II RGGWCCY 2 cut(s) 437, 2203
Psp6I CCWGG 7 cut(s) 927, 1116, 3707, 3809, 4602, 5529, 7273
PspFI CCCAGC 1 cut(s) 1589
PspGI CCWGG 7 cut(s) 927, 1116, 3707, 3809, 4602, 5529, 7273
PspPI GGNCC 8 cut(s) 437, 570, 2151, 2203, 6322, 6428, 6880, 7461
PspPPI RGGWCCY 2 cut(s) 437, 2203
PsrI GAACNNNNNNTAC 2 cut(s) 312, 344
PstI CTGCAG 5 cut(s) 1420, 2458, 4080, 4290, 5590
PstNI CAGNNNCTG 3 cut(s) 2053, 3463, 3581
PsyI GACNNNGTC 1 cut(s) 7382
PteI GCGCGC 1 cut(s) 5173
PvuII CAGCTG 5 cut(s) 293, 1631, 5591, 5978, 6167
RsaI GTAC 9 cut(s) 559, 1830, 2798, 3192, 3825, 4839, 5316, 6939, 7363
RsaNI GTAC 9 cut(s) 558, 1829, 2797, 3191, 3824, 4838, 5315, 6938, 7362
SacI GAGCTC 3 cut(s) 855, 2199, 5733
SapI GCTCTTC 2 cut(s) 792, 5277
Sau96I GGNCC 8 cut(s) 437, 570, 2151, 2203, 6322, 6428, 6880, 7461
ScaI AGTACT 1 cut(s) 6939
ScrFI CCNGG 7 cut(s) 929, 1118, 3709, 3811, 4604, 5531, 7275
SduI GDGCHC 7 cut(s) 855, 940, 1727, 2199, 5577, 5733, 7283
SexAI ACCWGGT 1 cut(s) 1116
SfcI CTRYAG 7 cut(s) 1148, 1416, 1893, 2454, 4076, 4286, 5586
SfuI TTCGAA 1 cut(s) 3097
SinI GGWCC 5 cut(s) 437, 570, 2203, 6322, 6880
SpeI ACTAGT 3 cut(s) 2357, 3719, 5969
SphI GCATGC 1 cut(s) 5967
SseBI AGGCCT 1 cut(s) 193
SsiI CCGC 8 cut(s) 335, 455, 1173, 4530, 6069, 6698, 6992, 7438
SspI AATATT 3 cut(s) 85, 2165, 6865
SstI GAGCTC 3 cut(s) 855, 2199, 5733
StuI AGGCCT 1 cut(s) 193
StyD4I CCNGG 7 cut(s) 927, 1116, 3707, 3809, 4602, 5529, 7273
StyI CCWWGG 7 cut(s) 2154, 2971, 3375, 4251, 4401, 5322, 6342
TaiI ACGT 6 cut(s) 1426, 2319, 4897, 6246, 6391, 6921
TaqI TCGA 9 cut(s) 42, 1926, 1931, 3097, 3981, 4026, 4890, 7142, 7386
TatI WGTACW 8 cut(s) 557, 1828, 2796, 3190, 3823, 5314, 6937, 7361
TauI GCSGC 3 cut(s) 4532, 6995, 7441
TspGWI ACGGA 3 cut(s) 512, 5753, 7208
Tth111I GACNNNGTC 1 cut(s) 7382
Van91I CCANNNNNTGG 1 cut(s) 1958
Vha464I CTTAAG 4 cut(s) 533, 1168, 4369, 6754
VneI GTGCAC 1 cut(s) 5573
VpaK11BI GGWCC 5 cut(s) 437, 570, 2203, 6322, 6880
XbaI TCTAGA 4 cut(s) 902, 2827, 4690, 5446
XceI RCATGY 9 cut(s) 35, 383, 2342, 2864, 3008, 3035, 3737, 3988, 5967
XcmI CCANNNNNNNNNTGG 1 cut(s) 6787
XmiI GTMKAC 4 cut(s) 2077, 2777, 3126, 4964
XmnI GAANNNNTTC 4 cut(s) 636, 2439, 3273, 5465
ZraI GACGTC 1 cut(s) 6919
ZrmI AGTACT 1 cut(s) 6939
Zsp2I ATGCAT 1 cut(s) 4332
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.