Rorug06G0337400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0001092
Physical Location & Seq
Forward (+)
48958834 .. 48960756
1923 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0337400.1

Sequence Viewer

Length: 1410 bp
ATGGACAGATTGGTGAAGGCGGACGTGAAGGAAGTGGAGCTCAGCTTCAAAAGAGACCAGAAGTGCGGCACAACTTTCAGGCTCAGCAACCTCATGCACACCATGTCCGTCGCAGTTAACCTAACCACCACAAACCCATCTCTCTTCTCTTTCTCACAGCCCTTCTCTATAATCCCTCCTCTCTCTTCCTCCTCCTACACCCTCCTCCTCTCTCAGCCCTCCGATCATCCCCCTCTCCCCACCACCGTCCCTAATGACGTCATCAACGTCAAGGCCTCGATGCTGCCGACAGGGAAGGCCGGTCTGGAGGATCTCCGCCGTCTGTTCGCCAGACCCGGGCCGCACGTTTTCCGGGACGCCACCATACCCATCTCGTTTGTGGGCCCACACGTGGTGGAGTTTCTCATTTCTCAGCTGACCCAGATCTCTGGGTTCGATTCCTTCTTCAACAAAGCGGTTTCCGGGTGCTCTGCAGCTGAGCTCACGGCGCTGCTCAGACCCGCCATAGCTTCCGGCAACGCGAACTTGGTCTCGAGCTTGATCGACGCCGGGGGAGATGTGAATCGGAAAGTTTCGGATTCCGGGTGTTTGTTGTCTCTGGCTGTTCGGAGCGGAAGTATTGAAGTTGTGAAGATTCTTATAGCGTGCGGCTGTAAAGTCGATAACTCGGTTTTGCACGACGCGGCGGCGATGAACCGGGTCGATTTGGTGGAGATTTTGTGCAAGAATTTCCCGGAAATTGACGTCAACTGGGTTGACTCCGATTGCCGGACTCCGATTCACATCGCCGCGGCGAACGGCCACGTGGAGATGTTGAAGTTCTGTATTTCGGCCGGCGGTAATGCGGACGTTTGGGACCGGAAGGGGTGGACGCCGCTCCATTGCGCGGCGGAGAGGGGTCACTTGGAGCCCATCAAGTCTTTGTTGGAATGTTCCAATGTGAAATATGTAGTTAACAAGAATGGAAAGACAGCTTTTGACCTCGCAGCTGAAAATGGTCACTTAAATTTGCTCGGTTTTCTCCGATTCGACGACGTTTTGCTCCGGGCGGCGAGGCTGGACGACGCTCACGGCCTAAAGAGTTGCCTTGCGGAAGGGGCAGAGGTGAATGGGAGGGACCAAAATGGTTGGACTCCTTTGCATAGGGCTGCATTCAAGGGCAGAATCGAGTGTGTCAAGGTGCTGCTCAATCACGGTGCTCAGCTGGATGTCGTCGACGATGCAGGCTACACGCCGCTGCATTGCGCGGTGGAGGCCGGGCATGTACAAGTAGCTCTTTTGTTGGTTGCGCATGGGGCTCGAGCCAATGTGAAGAGCCTCGAGGGCATTGTGTCGCCGGTTAGCTTGGATCGTTTTAAGAACCACCCTGCTCTTGTTCATCCTGTATGTCATGAACAGGAGAGAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

469

Amino Acids

50.58

Weight (kDa)

6.55

Isoelectric Point (pI)

30.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 168 - 250 7.9e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 198 - 274 8.8e-13 Ankyrin repeats (3 copies)
Ank_2 PF12796 225 - 311 2e-16 Ankyrin repeats (3 copies)
Ank_4 PF13637 225 - 274 1.3e-10 Ankyrin repeats (many copies)
Ank_5 PF13857 243 - 294 1.2e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 260 - 341 1.3e-15 Ankyrin repeats (3 copies)
Ank_4 PF13637 268 - 303 1.7e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 347 - 438 5.9e-20 Ankyrin repeats (3 copies)
Ank_4 PF13637 357 - 396 4.5e-08 Ankyrin repeats (many copies)
Ank_5 PF13857 366 - 414 7.8e-08 Ankyrin repeats (many copies)
Ank PF00023 375 - 407 1.1e-08 Ankyrin repeat
Ank_4 PF13637 380 - 429 1.4e-13 Ankyrin repeats (many copies)
Ank_5 PF13857 395 - 442 9.1e-06 Ankyrin repeats (many copies)
Ank PF00023 409 - 438 3.6e-06 Ankyrin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 261, 747
AbsI CCTCGAGG 1 cut(s) 1319
Acc16I TGCGCA 1 cut(s) 1290
AccBSI CCGCTC 2 cut(s) 612, 877
AccI GTMKAC 1 cut(s) 1215
AccII CGCG 5 cut(s) 521, 683, 791, 887, 1247
AclWI GGATC 2 cut(s) 318, 1356
AcoI YGGCCR 2 cut(s) 799, 831
AcsI RAATTY 2 cut(s) 727, 1006
AcvI CACGTG 2 cut(s) 391, 805
AcyI GRCGYC 5 cut(s) 258, 357, 546, 744, 872
AdeI CACNNNGTG 1 cut(s) 394
AfaI GTAC 1 cut(s) 1266
AfiI CCNNNNNNNGG 4 cut(s) 336, 391, 768, 886
AflIII ACRYGT 1 cut(s) 388
AgsI TTSAA 5 cut(s) 49, 448, 623, 817, 1156
AjiI CACGTC 1 cut(s) 25
Alw21I GWGCWC 4 cut(s) 42, 470, 483, 1201
Alw26I GTCTC 3 cut(s) 48, 535, 600
AlwI GGATC 2 cut(s) 318, 1356
Ama87I CYCGRG 4 cut(s) 335, 532, 1299, 1319
AoxI GGCC 8 cut(s) 273, 297, 338, 382, 799, 831, 1072, 1254
ApaI GGGCCC 1 cut(s) 386
ApeKI GCWGC 7 cut(s) 283, 473, 490, 986, 1148, 1183, 1237
ApoI RAATTY 2 cut(s) 727, 1006
AspLEI GCGC 4 cut(s) 490, 887, 1247, 1291
AspS9I GGNCC 5 cut(s) 338, 382, 383, 856, 1117
AsuHPI GGTGA 2 cut(s) 25, 1117
AvaI CYCGRG 4 cut(s) 335, 532, 1299, 1319
AvaII GGWCC 2 cut(s) 856, 1117
BaeGI GKGCMC 1 cut(s) 386
BanII GRGCYC 5 cut(s) 42, 386, 483, 912, 1300
BbrPI CACGTG 2 cut(s) 391, 805
Bbv12I GWGCWC 4 cut(s) 42, 470, 483, 1201
BbvI GCAGC 7 cut(s) 270, 477, 485, 998, 1135, 1170, 1224
BccI CCATC 3 cut(s) 145, 377, 920
BceAI ACGGC 4 cut(s) 303, 501, 814, 1087
BcgI CGANNNNNNTGC 2 cut(s) 1280, 1314
BcoDI GTCTC 3 cut(s) 48, 535, 600
BfmI CTRYAG 1 cut(s) 471
BfoI RGCGCY 1 cut(s) 491
BglI GCCNNNNNGGC 1 cut(s) 1323
BglII AGATCT 1 cut(s) 423
BlpI GCTNAGC 4 cut(s) 41, 83, 477, 1200
Bme18I GGWCC 2 cut(s) 856, 1117
BmeT110I CYCGRG 4 cut(s) 335, 532, 1299, 1319
BmgBI CACGTC 1 cut(s) 25
BmgT120I GGNCC 5 cut(s) 338, 382, 383, 856, 1117
BmiI GGNNCC 4 cut(s) 384, 857, 909, 1118
BmrI ACTGGG 1 cut(s) 760
BmsI GCATC 2 cut(s) 270, 1210
BmuI ACTGGG 1 cut(s) 760
BpmI CTGGAG 1 cut(s) 326
Bpu1102I GCTNAGC 4 cut(s) 41, 83, 477, 1200
BsaAI YACGTR 2 cut(s) 391, 805
BsaBI GATNNNNATC 2 cut(s) 561, 782
BsaHI GRCGYC 5 cut(s) 258, 357, 546, 744, 872
BsaI GGTCTC 2 cut(s) 48, 535
BsaJI CCNNGG 3 cut(s) 335, 549, 789
BsaWI WCCGGW 1 cut(s) 858
BsaXI ACNNNNNCTCC 4 cut(s) 601, 631, 704, 734
Bsc4I CCNNNNNNNGG 4 cut(s) 336, 391, 768, 886
Bse118I RCCGGY 3 cut(s) 299, 833, 1336
Bse1I ACTGG 1 cut(s) 755
Bse3DI GCAATG 2 cut(s) 880, 1240
Bse8I GATNNNNATC 2 cut(s) 561, 782
BseDI CCNNGG 3 cut(s) 335, 549, 789
BseGI GGATG 3 cut(s) 226, 1213, 1378
BseJI GATNNNNATC 2 cut(s) 561, 782
BseLI CCNNNNNNNGG 4 cut(s) 336, 391, 768, 886
BseMI GCAATG 2 cut(s) 880, 1240
BseMII CTCAG 7 cut(s) 55, 97, 227, 425, 468, 508, 1214
BseNI ACTGG 1 cut(s) 755
BseRI GAGGAG 4 cut(s) 168, 181, 194, 197
BseSI GKGCMC 1 cut(s) 386
BseX3I CGGCCG 1 cut(s) 831
BseXI GCAGC 7 cut(s) 270, 477, 485, 998, 1135, 1170, 1224
Bsh1236I CGCG 5 cut(s) 521, 683, 791, 887, 1247
Bsh1285I CGRYCG 1 cut(s) 834
BshFI GGCC 8 cut(s) 275, 299, 340, 384, 801, 833, 1074, 1256
BsiEI CGRYCG 1 cut(s) 834
BsiHKAI GWGCWC 4 cut(s) 42, 470, 483, 1201
BsiHKCI CYCGRG 4 cut(s) 335, 532, 1299, 1319
BslFI GGGAC 4 cut(s) 233, 368, 869, 1130
BslI CCNNNNNNNGG 4 cut(s) 336, 391, 768, 886
BsmAI GTCTC 3 cut(s) 48, 535, 600
BsmFI GGGAC 4 cut(s) 233, 368, 869, 1130
BsmI GAATGC 1 cut(s) 1151
BsnI GGCC 8 cut(s) 275, 299, 340, 384, 801, 833, 1074, 1256
Bso31I GGTCTC 2 cut(s) 48, 535
BsoBI CYCGRG 4 cut(s) 335, 532, 1299, 1319
Bsp120I GGGCCC 1 cut(s) 382
Bsp1286I GDGCHC 7 cut(s) 42, 386, 470, 483, 912, 1201, 1300
Bsp1407I TGTACA 1 cut(s) 1264
Bsp143I GATC 5 cut(s) 223, 310, 423, 540, 1348
Bsp1720I GCTNAGC 4 cut(s) 41, 83, 477, 1200
BspANI GGCC 8 cut(s) 275, 299, 340, 384, 801, 833, 1074, 1256
BspCNI CTCAG 7 cut(s) 54, 96, 226, 424, 469, 507, 1213
BspFNI CGCG 5 cut(s) 521, 683, 791, 887, 1247
BspHI TCATGA 1 cut(s) 1390
BspLI GGNNCC 4 cut(s) 384, 857, 909, 1118
BspMAI CTGCAG 1 cut(s) 475
BspPI GGATC 2 cut(s) 318, 1356
BspQI GCTCTTC 1 cut(s) 1307
BspTNI GGTCTC 2 cut(s) 48, 535
BsrBI CCGCTC 2 cut(s) 612, 877
BsrDI GCAATG 2 cut(s) 880, 1240
BsrFI RCCGGY 3 cut(s) 299, 833, 1336
BsrGI TGTACA 1 cut(s) 1264
BsrI ACTGG 1 cut(s) 755
BssAI RCCGGY 3 cut(s) 299, 833, 1336
BssECI CCNNGG 3 cut(s) 335, 549, 789
BssMI GATC 5 cut(s) 223, 310, 423, 540, 1348
BssNI GRCGYC 5 cut(s) 258, 357, 546, 744, 872
Bst4CI ACNGT 2 cut(s) 247, 1196
Bst6I CTCTTC 3 cut(s) 149, 190, 1307
BstACI GRCGYC 5 cut(s) 258, 357, 546, 744, 872
BstAUI TGTACA 1 cut(s) 1264
BstBAI YACGTR 2 cut(s) 391, 805
BstC8I GCNNGC 3 cut(s) 646, 835, 1225
BstDEI CTNAG 7 cut(s) 41, 83, 213, 411, 477, 494, 1200
BstDSI CCRYGG 1 cut(s) 789
BstF5I GGATG 3 cut(s) 226, 1213, 1378
BstFNI CGCG 5 cut(s) 521, 683, 791, 887, 1247
BstH2I RGCGCY 1 cut(s) 491
BstHHI GCGC 4 cut(s) 490, 887, 1247, 1291
BstKTI GATC 5 cut(s) 226, 313, 426, 543, 1351
BstMAI GTCTC 3 cut(s) 48, 535, 600
BstMBI GATC 5 cut(s) 223, 310, 423, 540, 1348
BstMCI CGRYCG 1 cut(s) 834
BstMWI GCNNNNNNNGC 5 cut(s) 487, 1097, 1253, 1295, 1323
BstNSI RCATGY 1 cut(s) 1265
BstSFI CTRYAG 1 cut(s) 471
BstSLI GKGCMC 1 cut(s) 386
BstUI CGCG 5 cut(s) 521, 683, 791, 887, 1247
BstV1I GCAGC 7 cut(s) 270, 477, 485, 998, 1135, 1170, 1224
BstX2I RGATCY 2 cut(s) 310, 423
BstXI CCANNNNNNTGG 1 cut(s) 428
BstYI RGATCY 2 cut(s) 310, 423
BstZI CGGCCG 1 cut(s) 831
BsuRI GGCC 8 cut(s) 275, 299, 340, 384, 801, 833, 1074, 1256
BtgI CCRYGG 1 cut(s) 789
BtgZI GCGATG 2 cut(s) 704, 769
BtrI CACGTC 1 cut(s) 25
BtsCI GGATG 3 cut(s) 226, 1213, 1378
Cac8I GCNNGC 3 cut(s) 646, 835, 1225
CciI TCATGA 1 cut(s) 1390
CfoI GCGC 4 cut(s) 490, 887, 1247, 1291
Cfr10I RCCGGY 3 cut(s) 299, 833, 1336
Cfr13I GGNCC 5 cut(s) 338, 382, 383, 856, 1117
Cfr42I CCGCGG 1 cut(s) 792
Cfr9I CCCGGG 1 cut(s) 335
CseI GACGC 5 cut(s) 365, 554, 689, 880, 1073
Csp6I GTAC 1 cut(s) 1265
CviAII CATG 5 cut(s) 94, 103, 1262, 1292, 1391
CviQI GTAC 1 cut(s) 1265
DdeI CTNAG 7 cut(s) 41, 83, 213, 411, 477, 494, 1200
DpnI GATC 5 cut(s) 225, 312, 425, 542, 1350
DpnII GATC 5 cut(s) 223, 310, 423, 540, 1348
DraIII CACNNNGTG 1 cut(s) 394
EaeI YGGCCR 2 cut(s) 799, 831
EagI CGGCCG 1 cut(s) 831
Eam1104I CTCTTC 3 cut(s) 149, 190, 1307
EarI CTCTTC 3 cut(s) 149, 190, 1307
EciI GGCGGA 3 cut(s) 35, 305, 905
Ecl136II GAGCTC 2 cut(s) 40, 481
EclXI CGGCCG 1 cut(s) 831
Eco147I AGGCCT 1 cut(s) 275
Eco24I GRGCYC 5 cut(s) 42, 386, 483, 912, 1300
Eco31I GGTCTC 2 cut(s) 48, 535
Eco47I GGWCC 2 cut(s) 856, 1117
Eco52I CGGCCG 1 cut(s) 831
Eco53kI GAGCTC 2 cut(s) 40, 481
Eco72I CACGTG 2 cut(s) 391, 805
Eco88I CYCGRG 4 cut(s) 335, 532, 1299, 1319
EcoICRI GAGCTC 2 cut(s) 40, 481
EcoT38I GRGCYC 5 cut(s) 42, 386, 483, 912, 1300
FaeI CATG 5 cut(s) 97, 106, 1265, 1295, 1394
FalI AAGNNNNNCTT 2 cut(s) 1260, 1292
FaqI GGGAC 4 cut(s) 233, 368, 869, 1130
FatI CATG 5 cut(s) 93, 102, 1261, 1291, 1390
FauI CCCGC 1 cut(s) 508
FblI GTMKAC 1 cut(s) 1215
FokI GGATG 3 cut(s) 213, 1220, 1365
FriOI GRGCYC 5 cut(s) 42, 386, 483, 912, 1300
FspI TGCGCA 1 cut(s) 1290
GlaI GCGC 4 cut(s) 489, 886, 1246, 1290
GsuI CTGGAG 1 cut(s) 326
HaeII RGCGCY 1 cut(s) 491
HaeIII GGCC 8 cut(s) 275, 299, 340, 384, 801, 833, 1074, 1256
HgaI GACGC 5 cut(s) 365, 554, 689, 880, 1073
HhaI GCGC 4 cut(s) 490, 887, 1247, 1291
Hin1I GRCGYC 5 cut(s) 258, 357, 546, 744, 872
Hin1II CATG 5 cut(s) 97, 106, 1265, 1295, 1394
Hin6I GCGC 4 cut(s) 488, 885, 1245, 1289
HinP1I GCGC 4 cut(s) 488, 885, 1245, 1289
HincII GTYRAC 5 cut(s) 118, 748, 757, 955, 1216
HindII GTYRAC 5 cut(s) 118, 748, 757, 955, 1216
HpaI GTTAAC 2 cut(s) 118, 955
HphI GGTGA 2 cut(s) 25, 1117
Hpy166II GTNNAC 6 cut(s) 118, 748, 757, 870, 955, 1216
Hpy188I TCNGA 8 cut(s) 223, 497, 567, 577, 609, 763, 777, 1025
Hpy188III TCNNGA 3 cut(s) 305, 532, 1391
Hpy8I GTNNAC 6 cut(s) 118, 748, 757, 870, 955, 1216
Hpy99I CGWCG 8 cut(s) 113, 548, 683, 1034, 1037, 1067, 1217, 1220
HpyAV CCTTC 7 cut(s) 10, 22, 172, 289, 451, 856, 1088
HpyCH4III ACNGT 2 cut(s) 247, 1196
HpyCH4IV ACGT 9 cut(s) 24, 258, 267, 345, 390, 744, 804, 849, 1035
HpyCH4V TGCA 8 cut(s) 97, 473, 676, 723, 1141, 1151, 1223, 1240
HpyF10VI GCNNNNNNNGC 5 cut(s) 487, 1097, 1253, 1295, 1323
HpyF3I CTNAG 7 cut(s) 41, 83, 213, 411, 477, 494, 1200
HpySE526I ACGT 9 cut(s) 24, 258, 267, 345, 390, 744, 804, 849, 1035
Hsp92I GRCGYC 5 cut(s) 258, 357, 546, 744, 872
Hsp92II CATG 5 cut(s) 97, 106, 1265, 1295, 1394
HspAI GCGC 4 cut(s) 488, 885, 1245, 1289
KroI GCCGGC 1 cut(s) 833
KroNI GCCGGC 1 cut(s) 835
KspAI GTTAAC 2 cut(s) 118, 955
KspI CCGCGG 1 cut(s) 792
Kzo9I GATC 5 cut(s) 223, 310, 423, 540, 1348
LguI GCTCTTC 1 cut(s) 1307
LmnI GCTCC 5 cut(s) 37, 609, 882, 907, 1047
Lsp1109I GCAGC 7 cut(s) 270, 477, 485, 998, 1135, 1170, 1224
LweI GCATC 2 cut(s) 270, 1210
MaeII ACGT 9 cut(s) 24, 258, 267, 345, 390, 744, 804, 849, 1035
MaeIII GTNAC 2 cut(s) 899, 998
MalI GATC 5 cut(s) 225, 312, 425, 542, 1350
MbiI CCGCTC 2 cut(s) 612, 877
MboI GATC 5 cut(s) 223, 310, 423, 540, 1348
MboII GAAGA 5 cut(s) 136, 177, 436, 643, 1324
MflI RGATCY 2 cut(s) 310, 423
MhlI GDGCHC 7 cut(s) 42, 386, 470, 483, 912, 1201, 1300
MluCI AATT 3 cut(s) 727, 738, 1006
MlyI GAGTC 3 cut(s) 752, 766, 1126
MmeI TCCRAC 2 cut(s) 906, 1109
MroNI GCCGGC 1 cut(s) 833
MseI TTAA 4 cut(s) 117, 954, 1004, 1356
MspA1I CMGCKG 6 cut(s) 415, 476, 791, 989, 1204, 1237
Mva1269I GAATGC 1 cut(s) 1151
MvnI CGCG 5 cut(s) 521, 683, 791, 887, 1247
MwoI GCNNNNNNNGC 5 cut(s) 487, 1097, 1253, 1295, 1323
NaeI GCCGGC 1 cut(s) 835
NdeII GATC 5 cut(s) 223, 310, 423, 540, 1348
NgoMIV GCCGGC 1 cut(s) 833
NlaIII CATG 5 cut(s) 97, 106, 1265, 1295, 1394
NlaIV GGNNCC 4 cut(s) 384, 857, 909, 1118
NmuCI GTSAC 2 cut(s) 899, 998
NsbI TGCGCA 1 cut(s) 1290
NspI RCATGY 1 cut(s) 1265
PaeR7I CTCGAG 3 cut(s) 532, 1299, 1319
PagI TCATGA 1 cut(s) 1390
PceI AGGCCT 1 cut(s) 275
PciSI GCTCTTC 1 cut(s) 1307
PcsI WCGNNNNNNNCGW 2 cut(s) 264, 284
PctI GAATGC 1 cut(s) 1151
PdiI GCCGGC 1 cut(s) 835
PfeI GAWTC 7 cut(s) 437, 562, 578, 634, 778, 1026, 1164
PfoI TCCNGGA 2 cut(s) 351, 732
PleI GAGTC 3 cut(s) 752, 766, 1126
PmaCI CACGTG 2 cut(s) 391, 805
PmlI CACGTG 2 cut(s) 391, 805
PpsI GAGTC 3 cut(s) 752, 766, 1126
Ppu21I YACGTR 2 cut(s) 391, 805
Psp124BI GAGCTC 2 cut(s) 42, 483
PspCI CACGTG 2 cut(s) 391, 805
PspN4I GGNNCC 4 cut(s) 384, 857, 909, 1118
PspOMI GGGCCC 1 cut(s) 382
PspPI GGNCC 5 cut(s) 338, 382, 383, 856, 1117
PspXI VCTCGAGB 2 cut(s) 1299, 1319
PstI CTGCAG 1 cut(s) 475
PsuI RGATCY 2 cut(s) 310, 423
PvuII CAGCTG 4 cut(s) 415, 476, 989, 1204
RsaI GTAC 1 cut(s) 1266
RsaNI GTAC 1 cut(s) 1265
SacI GAGCTC 2 cut(s) 42, 483
SacII CCGCGG 1 cut(s) 792
SalI GTCGAC 1 cut(s) 1214
SapI GCTCTTC 1 cut(s) 1307
SaqAI TTAA 4 cut(s) 117, 954, 1004, 1356
Sau3AI GATC 5 cut(s) 223, 310, 423, 540, 1348
Sau96I GGNCC 5 cut(s) 338, 382, 383, 856, 1117
SchI GAGTC 3 cut(s) 752, 766, 1126
SduI GDGCHC 7 cut(s) 42, 386, 470, 483, 912, 1201, 1300
SfaNI GCATC 2 cut(s) 270, 1210
SfcI CTRYAG 1 cut(s) 471
Sfr274I CTCGAG 3 cut(s) 532, 1299, 1319
Sfr303I CCGCGG 1 cut(s) 792
SgrBI CCGCGG 1 cut(s) 792
SgrDI CGTCGACG 1 cut(s) 1214
SinI GGWCC 2 cut(s) 856, 1117
SlaI CTCGAG 3 cut(s) 532, 1299, 1319
SmaI CCCGGG 1 cut(s) 337
SmlI CTYRAG 3 cut(s) 532, 1299, 1319
SmoI CTYRAG 3 cut(s) 532, 1299, 1319
Sse9I AATT 3 cut(s) 727, 738, 1006
SseBI AGGCCT 1 cut(s) 275
SstI GAGCTC 2 cut(s) 42, 483
StuI AGGCCT 1 cut(s) 275
TaaI ACNGT 2 cut(s) 247, 1196
TaiI ACGT 9 cut(s) 27, 261, 270, 348, 393, 747, 807, 852, 1038
TasI AATT 3 cut(s) 727, 738, 1006
TatI WGTACW 1 cut(s) 1264
TfiI GAWTC 7 cut(s) 437, 562, 578, 634, 778, 1026, 1164
Tru1I TTAA 4 cut(s) 117, 954, 1004, 1356
Tru9I TTAA 4 cut(s) 117, 954, 1004, 1356
TseFI GTSAC 2 cut(s) 899, 998
TseI GCWGC 7 cut(s) 283, 473, 490, 986, 1148, 1183, 1237
Tsp45I GTSAC 2 cut(s) 899, 998
TspDTI ATGAA 3 cut(s) 707, 1367, 1407
TspGWI ACGGA 1 cut(s) 97
TspMI CCCGGG 1 cut(s) 335
VpaK11BI GGWCC 2 cut(s) 856, 1117
XapI RAATTY 2 cut(s) 727, 1006
XceI RCATGY 1 cut(s) 1265
XcmI CCANNNNNNNNNTGG 1 cut(s) 376
XhoI CTCGAG 3 cut(s) 532, 1299, 1319
XmaI CCCGGG 1 cut(s) 335
XmiI GTMKAC 1 cut(s) 1215
ZraI GACGTC 2 cut(s) 259, 745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.