Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002776

Physical Location & Seq

Genomic Coordinates Forward (+)

25907243 .. 25915320

Gene Structure 8078 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G238500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3189 bp

ATGGTCACCGATACTTACTCGAAGATGATGTCGGAGATGTCAATGCGTTCCATGTTGAAGAACGGCGAAGATTTGAGTATGTTGATTCGCGAACAGAGGCGTCAACACGAAGCAAGTGAGCGAGAGAAGGAGGAGCTCAATCTGTACAGAAGTGGGTCGGCCCCACCCACAGTCGAAGGCTCGTTAAACGCGGTTGGGGGCTTGTTCGAGGACTCGGCGCTGTCGGGTTTCACGAAAAACGGCAGCAAAGGCTTTGCGACCGAAGAGGAGCTTCGTGCCGATCCAGCTTATGTGACTTACTACTATTCCAATGTGAATCTCAATCCGCGGCTTCCGCCGCCGCTGGTTTCGAAGGAGGACTGGCGTTTTGCGCAGCGGTTCCAAGGCGGGGGCGGTGGAGGTGGAGGTGGAGGTGGAGGTTCGGCTGTTGGAGGCATTGGAGATAGGAGGATAGGAGGTAGGAGTGGTGGCGAAGGTGGGGATGTGAACAGGTCACTTTTCTCGGTGCAGCCAGGGGTTGGAGGGAAGGAGGAGAATGGGGTGGCCGGGAGGAAGGCTCCGGCGGAGTGGGGCGGTGATGGGTTGATTGGGTTGCCGGGATTGGGACTTGGGAGTAGGCAGAAGAGTATTGCAGAGATCATTCAGGATGATATACATAATACAAATGTCTCAAGACACCCTTCTCGTCCAGCTAGCCGGAATGCATTTGATGATGGTGTTGAAACTTCAGAAACCCAGTTTGCTCATCTGCATCGTGATTTGGCATCTATAGATGCTTTGCGTTCTGGTGGAAATAAGCAAGGAATGTCTGCTGTCCAGAATGTCGGCTCATCGGGTTCTCATACATATGCTTCTGCTTTGGGTGCTTCATTGTCGAGAAGCACGACCCCAGACCCTCAGCTTATAGCTAGGGCTCCTAGTCCTCGGATTCCACCTGTTGGTGGAGGAAGGGCTTCCTCCATGGATAAAAAAATTGCCAATGGTCAAAACTCATTCAATGGTGCCTCACCCAATGTGAATGACTCTGCAGATCTAGCAGCTGCTTTATCTGGTATGAACCTGTCGGCAAATGGCAGGATAGATGAAGAGAATCATGCACGCTCACAAATTCAACATGAAATTGATAACCACCATAACCTTTTTGATATTCAAGGTGATCGGAGCCATATGAAACAAAATTCGTATTTGAATAAGCCTGATTCTGGGAATTTTCATTTGCATTCTGTTTCCCAATCTTCTAAAAACTCTTATCAGAATATGGGGAGAGGCAGTGGGTTTGGGAGGGATCTGAACCACCCTTCATATATGTCTGATGATCCAGTTGAAATTAATAATCCCGCTGCATCTGCTAACTCATACTTAAGGGGACCTGTGCCAGGTCTTAATGGCCGAGGAAGCTCATTCTCCCAGTATCAGAATGTAGACAGTACCTCGTTTCCTAACTATGGCTTGGGTGGGTATTCTGTTAGTCCTTCGTCTCCATCCATGATGGGAAATCCACTTGGTAATGGTAGTTTACCACCCTTATTTGAAAATGCTGCTGCTGCATCTGCAATGGGTGGCTTGGATTCTGGAGCATTTGGAGGAGGTATGTCTCTAGGACCAAATTTGTTGGCAGCAGCTGCTGAATTGCAGAATATGAACAGGCTTGGAAATCACACTGCTGGGAGTGCTGTCCAGGTGCCCATGATGGACCCATTGTATCTTCAGTACTTGAGATCAAATGAATATGCTGCTGCCCAGGTTGCAGCCTTGAATGACCCCACAAAAGATAGGGAAGGCATGGGTAATATGTATATGGATTTACTGGGTTTGCAAAAAGCTTATCTGGGGCAATTGCTTTCGCCTCAAAAATCACAATTTGGTGTTCCCTACATTGGTAAGTCTGGTAGCTTGAATCATGGTTACTACGGAAATCCAGCATATGGGCTTGGCATGTCTTATTCTGGAACAGCATTGGGTGGCCCCCTTCTTCCAAACTCTCCTGTTGGACCGGGTAGTCCTGCCAGGCACAGTGATCGGAACTTGCGTTTTTCTTCTGGGATGAGGAACATGGGTGGAGGTCTCATGGGAGCTTGGCACTCTGAAACTGGTGGAAATTTTGATGAAAATTTTGCTTCCACTTTACTAGATGAGTTCAAAAGCAATAAGACTAAATGTTTTGAACTTTCAGAGATTGCAGGGCATGTTGTTGAGTTCAGTGCCGACCAGTATGGAAGTCGGTTTATTCAACAGAAACTTGAAACTGCCACAGCCGAAGAAAAGAACATGGTCTTTGATGAAATAATGCCCCAAGCCCTTTCTCTAATGACCGATGTGTTTGGTAATTATGTGATTCAGAAGTTTTTTGAGCATGGAACTGCATCACAAATAAGAGAACTTGCTGACCAGCTCACTGGGCATGTGCTGACCCTTAGCCTTCAAATGTATGGCTGTCGAGTGATCCAGAAGGCTATAGAAGTTGTTGAGCTGGACCAGCAGACTAAAATGGTAGGTGAACTGGATGGCCATGTTATGCGTTGTGTTCGTGATCAAAATGGGAACCATGTCGTTCAGAAGTGTATTGAATGTGTACCTGAAGATGCCATCCAGTTTGTTGTTTCAACTTTTTATGATCAAGTCGTGACACTGTCAACTCATCCATATGGTTGTCGTGTCATACAGAGAGTTTTGGAGCACTGCCATGACCCCAGAACGCAGCAAATAATGATGGATGAGATTCTGCAGTCTGTTTGCACTTTGGCGCAAGACCAATATGGAAATTATGTTGTACAGCATGTGCTGGAACATGGAAAACCACATGAACGATCAGCTATCATTAAGGAACTAACTGGCCAGATTGTTCAAATGAGCCAGCAAAAATTTGCATCAAATGTCATAGAAAAGTGTTTAAGTTTTGGAACTCTTGCTGAACGCCAGGCCCTTGTAACTGAGATGCTCGGTACCACTGATGAAAACGAGCCCCTTCAGGCGATGATGAAGGACCAGTTTGCAAACTATGTTGTACAGAAAGTGCTGGAAACTTGTGACGATCAGCAACTTGAACTAATCCTTAACCGAATTAAGGTTCATCTGAATGCTCTGAAGAAGTATACTTATGGGAAGCATATAGTTGCACGTGTAGAGAAACTTGTTGCTGCTGGAGAGAGGAGGATTAGCATTCTGGCTCCGCATGCTTCTGCTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NABP PUF

Protein Analysis

1063

Amino Acids

114.5

Weight (kDa)

5.95

Isoelectric Point (pI)

45.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002776)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29140 AT2G29140 AT2G29190 AT2G29190 AT2G29200 AT2G29200
fragaria_vesca	FvH4_3g36870 FvH4_7g22880 FvH4_7g22880
malus_domestica	MD01G1136900.v1.1 MD03G1087000.v1.1 MD07G1201900.v1.1 MD11G1096100.v1.1
prunus_persica	Prupe.2G238500_v2.0.a1 Prupe.2G238500_v2.0.a1 Prupe.6G071600_v2.0.a1
pyrus_communis	pycom01g15770 pycom07g18890 pycom11g08140
rosa_chinensis	RchiOBHm_Chr1g0368031 RchiOBHm_Chr5g0066091
rosa_laevigata	RLG00000027244 RLG00000035840
rosa_multiflora	Rmu_sc0002406.1_g000007 Rmu_sc0011946.1_g000001
rosa_roxburghii	Rroxscaffold_1G00014920 Rroxscaffold_4G00288920
rosa_rugosa	Rorug01G0338500 Rorug05G0376200
rosa_samantha	Rh1AG345400 Rh1BG307700 Rh1CG323300 Rh1DG339800 Rh5AG434700 Rh5BG451000 Rh5CG473300 Rh5DG464600
rosa_wichuraiana	Rw1G030740 Rw5G040710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1998
Acc16I	TGCGCA	1 cut(s)	372
Acc65I	GGTACC	1 cut(s)	2942
AccB1I	GGYRCC	3 cut(s)	1001, 1681, 2942
AccB7I	CCANNNNNTGG	3 cut(s)	518, 938, 1925
AccI	GTMKAC	2 cut(s)	1422, 3092
AccII	CGCG	3 cut(s)	90, 191, 328
AclWI	GGATC	4 cut(s)	275, 1293, 1310, 2437
AcoI	YGGCCR	4 cut(s)	543, 1387, 2506, 2833
AcsI	RAATTY	7 cut(s)	1107, 1177, 1207, 1606, 2098, 2110, 2861
AcuI	CTGAAG	5 cut(s)	711, 1691, 2598, 2951, 3104
AcvI	CACGTG	1 cut(s)	3119
AcyI	GRCGYC	1 cut(s)	100
AfaI	GTAC	7 cut(s)	146, 1429, 1712, 2574, 2772, 2944, 3006
AflII	CTTAAG	1 cut(s)	1360
AflIII	ACRYGT	1 cut(s)	3118
AjnI	CCWGG	6 cut(s)	511, 1375, 1677, 1740, 2006, 2916
Alw21I	GWGCWC	2 cut(s)	138, 2679
Alw26I	GTCTC	4 cut(s)	673, 1482, 1599, 2069
AlwI	GGATC	4 cut(s)	275, 1293, 1310, 2437
AlwNI	CAGNNNCTG	2 cut(s)	1622, 1625
AoxI	GGCC	7 cut(s)	159, 543, 1387, 1963, 2506, 2833, 2919
ApoI	RAATTY	7 cut(s)	1107, 1177, 1207, 1606, 2098, 2110, 2861
ArsI	GACNNNNNNTTYG	4 cut(s)	14, 46, 350, 382
AseI	ATTAAT	1 cut(s)	1329
Asp700I	GAANNNNTTC	1 cut(s)	952
Asp718I	GGTACC	1 cut(s)	2942
AspLEI	GCGC	3 cut(s)	220, 373, 2746
AspS9I	GGNCC	9 cut(s)	160, 1367, 1601, 1693, 1964, 1991, 2473, 2920, 2983
AsuC2I	CCSGG	3 cut(s)	547, 597, 1995
AsuHPI	GGTGA	4 cut(s)	587, 999, 1166, 2507
AsuII	TTCGAA	1 cut(s)	350
AsuNHI	GCTAGC	1 cut(s)	692
AvaII	GGWCC	6 cut(s)	1367, 1601, 1693, 1991, 2473, 2983
BaeGI	GKGCMC	1 cut(s)	1686
BalI	TGGCCA	2 cut(s)	2508, 2835
BanI	GGYRCC	3 cut(s)	1001, 1681, 2942
BanII	GRGCYC	3 cut(s)	138, 916, 2964
BbrPI	CACGTG	1 cut(s)	3119
Bbv12I	GWGCWC	2 cut(s)	138, 2679
BbvCI	CCTCAGC	1 cut(s)	897
BccI	CCATC	8 cut(s)	572, 707, 1483, 1489, 1684, 2498, 2594, 2704
BceAI	ACGGC	2 cut(s)	79, 256
BcgI	CGANNNNNNTGC	2 cut(s)	2000, 2034
BciT130I	CCWGG	6 cut(s)	513, 1377, 1679, 1742, 2008, 2918
BclI	TGATCA	2 cut(s)	2530, 2614
BcnI	CCSGG	3 cut(s)	547, 597, 1995
BcoDI	GTCTC	4 cut(s)	673, 1482, 1599, 2069
BfaI	CTAG	6 cut(s)	693, 909, 918, 1034, 1598, 2129
BfmI	CTRYAG	4 cut(s)	768, 1026, 2454, 2723
BfoI	RGCGCY	1 cut(s)	221
BfrI	CTTAAG	1 cut(s)	1360
BglII	AGATCT	1 cut(s)	1030
BmcAI	AGTACT	1 cut(s)	1712
Bme1390I	CCNGG	9 cut(s)	513, 547, 597, 1377, 1679, 1742, 1995, 2008, 2918
Bme18I	GGWCC	6 cut(s)	1367, 1601, 1693, 1991, 2473, 2983
BmgT120I	GGNCC	9 cut(s)	160, 1367, 1601, 1693, 1964, 1991, 2473, 2920, 2983
BmrFI	CCNGG	9 cut(s)	513, 547, 597, 1377, 1679, 1742, 1995, 2008, 2918
BmrI	ACTGGG	4 cut(s)	730, 1402, 1817, 2406
BmsI	GCATC	9 cut(s)	760, 763, 773, 1352, 1556, 2372, 2572, 2876, 2925
BmtI	GCTAGC	1 cut(s)	696
BmuI	ACTGGG	4 cut(s)	730, 1402, 1817, 2406
BplI	GAGNNNNNCTC	2 cut(s)	541, 573
BpmI	CTGGAG	2 cut(s)	1593, 3162
Bpu10I	CCTNAGC	2 cut(s)	897, 2414
Bpu14I	TTCGAA	1 cut(s)	350
BpuEI	CTTGAG	2 cut(s)	655, 1735
BpuMI	CCSGG	3 cut(s)	547, 597, 1995
BsaAI	YACGTR	1 cut(s)	3119
BsaHI	GRCGYC	1 cut(s)	100
BsaI	GGTCTC	1 cut(s)	2069
BsaJI	CCNNGG	7 cut(s)	326, 382, 512, 923, 960, 1390, 1740
BsaXI	ACNNNNNCTCC	2 cut(s)	1255, 1285
Bse3DI	GCAATG	1 cut(s)	1560
BseBI	CCWGG	6 cut(s)	513, 1377, 1679, 1742, 2008, 2918
BseDI	CCNNGG	7 cut(s)	326, 382, 512, 923, 960, 1390, 1740
BseGI	GGATG	8 cut(s)	487, 652, 1481, 2049, 2509, 2586, 2638, 2719
BseMI	GCAATG	1 cut(s)	1560
BseMII	CTCAG	2 cut(s)	911, 2922
BseRI	GAGGAG	5 cut(s)	146, 281, 545, 1599, 3163
BseSI	GKGCMC	1 cut(s)	1686
BseYI	CCCAGC	1 cut(s)	1664
BsgI	GTGCAG	1 cut(s)	527
Bsh1236I	CGCG	3 cut(s)	90, 191, 328
Bsh1285I	CGRYCG	1 cut(s)	261
BshFI	GGCC	7 cut(s)	161, 545, 1389, 1965, 2508, 2835, 2921
BshNI	GGYRCC	3 cut(s)	1001, 1681, 2942
BsiEI	CGRYCG	1 cut(s)	261
BsiHKAI	GWGCWC	2 cut(s)	138, 2679
BsiSI	CCGG	5 cut(s)	546, 560, 596, 697, 1994
BslFI	GGGAC	2 cut(s)	618, 1380
BsmAI	GTCTC	4 cut(s)	673, 1482, 1599, 2069
BsmBI	CGTCTC	1 cut(s)	1482
BsmFI	GGGAC	2 cut(s)	618, 1380
BsmI	GAATGC	4 cut(s)	706, 1219, 3082, 3159
BsnI	GGCC	7 cut(s)	161, 545, 1389, 1965, 2508, 2835, 2921
Bso31I	GGTCTC	1 cut(s)	2069
Bsp119I	TTCGAA	1 cut(s)	350
Bsp1286I	GDGCHC	5 cut(s)	138, 916, 1686, 2679, 2964
Bsp1407I	TGTACA	3 cut(s)	144, 2770, 3004
Bsp19I	CCATGG	1 cut(s)	960
Bsp68I	TCGCGA	1 cut(s)	90
BspANI	GGCC	7 cut(s)	161, 545, 1389, 1965, 2508, 2835, 2921
BspCNI	CTCAG	2 cut(s)	910, 2923
BspFNI	CGCG	3 cut(s)	90, 191, 328
BspMAI	CTGCAG	2 cut(s)	1030, 2727
BspOI	GCTAGC	1 cut(s)	696
BspPI	GGATC	4 cut(s)	275, 1293, 1310, 2437
BspT104I	TTCGAA	1 cut(s)	350
BspT107I	GGYRCC	3 cut(s)	1001, 1681, 2942
BspTI	CTTAAG	1 cut(s)	1360
BspTNI	GGTCTC	1 cut(s)	2069
BsrDI	GCAATG	1 cut(s)	1560
BsrGI	TGTACA	3 cut(s)	144, 2770, 3004
BssECI	CCNNGG	7 cut(s)	326, 382, 512, 923, 960, 1390, 1740
BssNAI	GTATAC	1 cut(s)	3093
BssNI	GRCGYC	1 cut(s)	100
BssT1I	CCWWGG	2 cut(s)	382, 960
Bst1107I	GTATAC	1 cut(s)	3093
Bst2UI	CCWGG	6 cut(s)	513, 1377, 1679, 1742, 2008, 2918
Bst4CI	ACNGT	4 cut(s)	172, 1427, 2015, 2631
Bst6I	CTCTTC	3 cut(s)	258, 617, 1080
BstACI	GRCGYC	1 cut(s)	100
BstAFI	CTTAAG	1 cut(s)	1360
BstAPI	GCANNNNNTGC	1 cut(s)	1622
BstAUI	TGTACA	3 cut(s)	144, 2770, 3004
BstBAI	YACGTR	1 cut(s)	3119
BstBI	TTCGAA	1 cut(s)	350
BstC8I	GCNNGC	4 cut(s)	694, 1099, 2855, 3174
BstDEI	CTNAG	4 cut(s)	897, 2414, 2931, 3186
BstDSI	CCRYGG	2 cut(s)	326, 960
BstEII	GGTNACC	1 cut(s)	4
BstENI	CCTNNNNNAGG	1 cut(s)	1374
BstF5I	GGATG	8 cut(s)	487, 652, 1481, 2049, 2509, 2586, 2638, 2719
BstFNI	CGCG	3 cut(s)	90, 191, 328
BstH2I	RGCGCY	1 cut(s)	221
BstHHI	GCGC	3 cut(s)	220, 373, 2746
BstMAI	GTCTC	4 cut(s)	673, 1482, 1599, 2069
BstMCI	CGRYCG	1 cut(s)	261
BstNI	CCWGG	6 cut(s)	513, 1377, 1679, 1742, 2008, 2918
BstNSI	RCATGY	5 cut(s)	1939, 2189, 2405, 2780, 3176
BstPI	GGTNACC	1 cut(s)	4
BstSCI	CCNGG	9 cut(s)	511, 545, 595, 1375, 1677, 1740, 1993, 2006, 2916
BstSFI	CTRYAG	4 cut(s)	768, 1026, 2454, 2723
BstSLI	GKGCMC	1 cut(s)	1686
BstUI	CGCG	3 cut(s)	90, 191, 328
BstX2I	RGATCY	2 cut(s)	1030, 1285
BstXI	CCANNNNNNTGG	1 cut(s)	2396
BstYI	RGATCY	2 cut(s)	1030, 1285
BstZ17I	GTATAC	1 cut(s)	3093
BsuRI	GGCC	7 cut(s)	161, 545, 1389, 1965, 2508, 2835, 2921
BtgI	CCRYGG	2 cut(s)	326, 960
BtgZI	GCGATG	1 cut(s)	2987
BtsCI	GGATG	8 cut(s)	487, 652, 1481, 2049, 2509, 2586, 2638, 2719
BtsI	GCAGTG	3 cut(s)	1276, 1659, 2677
BtsIMutI	CAGTG	8 cut(s)	1276, 1659, 2020, 2206, 2394, 2627, 2677, 2946
BtuMI	TCGCGA	1 cut(s)	90
Cac8I	GCNNGC	4 cut(s)	694, 1099, 2855, 3174
CaiI	CAGNNNCTG	2 cut(s)	1622, 1625
CfoI	GCGC	3 cut(s)	220, 373, 2746
Cfr13I	GGNCC	9 cut(s)	160, 1367, 1601, 1693, 1964, 1991, 2473, 2920, 2983
Cfr42I	CCGCGG	1 cut(s)	329
CseI	GACGC	1 cut(s)	89
Csp6I	GTAC	7 cut(s)	145, 1428, 1711, 2573, 2771, 2943, 3005
CviQI	GTAC	7 cut(s)	145, 1428, 1711, 2573, 2771, 2943, 3005
DdeI	CTNAG	4 cut(s)	897, 2414, 2931, 3186
DrdI	GACNNNNNNGTC	1 cut(s)	1998
DseDI	GACNNNNNNGTC	1 cut(s)	1998
EaeI	YGGCCR	4 cut(s)	543, 1387, 2506, 2833
Eam1104I	CTCTTC	3 cut(s)	258, 617, 1080
EarI	CTCTTC	3 cut(s)	258, 617, 1080
EciI	GGCGGA	2 cut(s)	324, 578
Ecl136II	GAGCTC	1 cut(s)	136
Eco130I	CCWWGG	2 cut(s)	382, 960
Eco24I	GRGCYC	3 cut(s)	138, 916, 2964
Eco31I	GGTCTC	1 cut(s)	2069
Eco47I	GGWCC	6 cut(s)	1367, 1601, 1693, 1991, 2473, 2983
Eco53kI	GAGCTC	1 cut(s)	136
Eco57I	CTGAAG	5 cut(s)	711, 1691, 2598, 2951, 3104
Eco72I	CACGTG	1 cut(s)	3119
Eco91I	GGTNACC	1 cut(s)	4
EcoICRI	GAGCTC	1 cut(s)	136
EcoNI	CCTNNNNNAGG	1 cut(s)	1374
EcoO109I	RGGNCCY	2 cut(s)	1367, 2920
EcoO65I	GGTNACC	1 cut(s)	4
EcoRII	CCWGG	6 cut(s)	511, 1375, 1677, 1740, 2006, 2916
EcoT14I	CCWWGG	2 cut(s)	382, 960
EcoT22I	ATGCAT	1 cut(s)	706
EcoT38I	GRGCYC	3 cut(s)	138, 916, 2964
ErhI	CCWWGG	2 cut(s)	382, 960
Esp3I	CGTCTC	1 cut(s)	1482
FalI	AAGNNNNNCTT	4 cut(s)	255, 287, 664, 696
FaqI	GGGAC	2 cut(s)	618, 1380
FauI	CCCGC	2 cut(s)	380, 1345
FauNDI	CATATG	4 cut(s)	847, 1167, 1924, 2644
FbaI	TGATCA	2 cut(s)	2530, 2614
FblI	GTMKAC	2 cut(s)	1422, 3092
FokI	GGATG	8 cut(s)	494, 659, 1468, 2056, 2516, 2573, 2625, 2726
FriOI	GRGCYC	3 cut(s)	138, 916, 2964
FspBI	CTAG	6 cut(s)	693, 909, 918, 1034, 1598, 2129
FspI	TGCGCA	1 cut(s)	372
GlaI	GCGC	3 cut(s)	219, 372, 2745
GsaI	CCCAGC	1 cut(s)	1668
GsuI	CTGGAG	2 cut(s)	1593, 3162
HaeII	RGCGCY	1 cut(s)	221
HaeIII	GGCC	7 cut(s)	161, 545, 1389, 1965, 2508, 2835, 2921
HapII	CCGG	5 cut(s)	546, 560, 596, 697, 1994
HgaI	GACGC	1 cut(s)	89
HhaI	GCGC	3 cut(s)	220, 373, 2746
Hin1I	GRCGYC	1 cut(s)	100
Hin6I	GCGC	3 cut(s)	218, 371, 2744
HinP1I	GCGC	3 cut(s)	218, 371, 2744
HincII	GTYRAC	2 cut(s)	104, 2634
HindII	GTYRAC	2 cut(s)	104, 2634
HindIII	AAGCTT	1 cut(s)	1821
HpaII	CCGG	5 cut(s)	546, 560, 596, 697, 1994
HphI	GGTGA	4 cut(s)	587, 999, 1166, 2507
Hpy166II	GTNNAC	8 cut(s)	104, 487, 1423, 1517, 2498, 2573, 2634, 3093
Hpy8I	GTNNAC	8 cut(s)	104, 487, 1423, 1517, 2498, 2573, 2634, 3093
HpyCH4III	ACNGT	4 cut(s)	172, 1427, 2015, 2631
HpyCH4IV	ACGT	1 cut(s)	3118
HpyF3I	CTNAG	4 cut(s)	897, 2414, 2931, 3186
HpySE526I	ACGT	1 cut(s)	3118
Hsp92I	GRCGYC	1 cut(s)	100
HspAI	GCGC	3 cut(s)	218, 371, 2744
KpnI	GGTACC	1 cut(s)	2946
Ksp22I	TGATCA	2 cut(s)	2530, 2614
KspI	CCGCGG	1 cut(s)	329
LmnI	GCTCC	9 cut(s)	133, 268, 562, 919, 1161, 1574, 2072, 2674, 3172
LweI	GCATC	9 cut(s)	760, 763, 773, 1352, 1556, 2372, 2572, 2876, 2925
MaeI	CTAG	6 cut(s)	693, 909, 918, 1034, 1598, 2129
MaeII	ACGT	1 cut(s)	3118
MaeIII	GTNAC	7 cut(s)	4, 292, 492, 1904, 2623, 2926, 3026
MfeI	CAATTG	1 cut(s)	1835
MflI	RGATCY	2 cut(s)	1030, 1285
MhlI	GDGCHC	5 cut(s)	138, 916, 1686, 2679, 2964
MlsI	TGGCCA	2 cut(s)	2508, 2835
MluNI	TGGCCA	2 cut(s)	2508, 2835
MlyI	GAGTC	2 cut(s)	206, 1016
MmeI	TCCRAC	4 cut(s)	12, 409, 499, 1969
Mox20I	TGGCCA	2 cut(s)	2508, 2835
Mph1103I	ATGCAT	1 cut(s)	706
MroXI	GAANNNNTTC	1 cut(s)	952
MscI	TGGCCA	2 cut(s)	2508, 2835
MseI	TTAA	8 cut(s)	185, 1329, 1361, 1383, 2820, 2891, 3054, 3063
MslI	CAYNNNNRTG	4 cut(s)	846, 2643, 2682, 3075
Msp20I	TGGCCA	2 cut(s)	2508, 2835
MspA1I	CMGCKG	6 cut(s)	328, 343, 376, 1040, 1340, 1622
MspCI	CTTAAG	1 cut(s)	1360
MspI	CCGG	5 cut(s)	546, 560, 596, 697, 1994
MspR9I	CCNGG	9 cut(s)	513, 547, 597, 1377, 1679, 1742, 1995, 2008, 2918
MunI	CAATTG	1 cut(s)	1835
Mva1269I	GAATGC	4 cut(s)	706, 1219, 3082, 3159
MvaI	CCWGG	6 cut(s)	513, 1377, 1679, 1742, 2008, 2918
MvnI	CGCG	3 cut(s)	90, 191, 328
NciI	CCSGG	3 cut(s)	547, 597, 1995
NcoI	CCATGG	1 cut(s)	960
NdeI	CATATG	4 cut(s)	847, 1167, 1924, 2644
NheI	GCTAGC	1 cut(s)	692
NmeAIII	GCCGAG	2 cut(s)	194, 1415
NmuCI	GTSAC	5 cut(s)	4, 292, 492, 2623, 3026
NruI	TCGCGA	1 cut(s)	90
NsbI	TGCGCA	1 cut(s)	372
NsiI	ATGCAT	1 cut(s)	706
NspI	RCATGY	5 cut(s)	1939, 2189, 2405, 2780, 3176
NspV	TTCGAA	1 cut(s)	350
PaeI	GCATGC	1 cut(s)	3176
PcsI	WCGNNNNNNNCGW	3 cut(s)	230, 881, 2026
PctI	GAATGC	4 cut(s)	706, 1219, 3082, 3159
PdmI	GAANNNNTTC	1 cut(s)	952
PfeI	GAWTC	9 cut(s)	85, 316, 928, 1090, 1199, 1568, 1897, 2335, 2719
PflFI	GACNNNGTC	1 cut(s)	2629
PflMI	CCANNNNNTGG	3 cut(s)	518, 938, 1925
PleI	GAGTC	2 cut(s)	206, 1016
PmaCI	CACGTG	1 cut(s)	3119
PmlI	CACGTG	1 cut(s)	3119
PpsI	GAGTC	2 cut(s)	206, 1016
Ppu21I	YACGTR	1 cut(s)	3119
PpuMI	RGGWCCY	1 cut(s)	1367
PshBI	ATTAAT	1 cut(s)	1329
Psp124BI	GAGCTC	1 cut(s)	138
Psp5II	RGGWCCY	1 cut(s)	1367
Psp6I	CCWGG	6 cut(s)	511, 1375, 1677, 1740, 2006, 2916
PspCI	CACGTG	1 cut(s)	3119
PspEI	GGTNACC	1 cut(s)	4
PspFI	CCCAGC	1 cut(s)	1664
PspGI	CCWGG	6 cut(s)	511, 1375, 1677, 1740, 2006, 2916
PspPI	GGNCC	9 cut(s)	160, 1367, 1601, 1693, 1964, 1991, 2473, 2920, 2983
PspPPI	RGGWCCY	1 cut(s)	1367
PstI	CTGCAG	2 cut(s)	1030, 2727
PstNI	CAGNNNCTG	2 cut(s)	1622, 1625
PsuI	RGATCY	2 cut(s)	1030, 1285
PsyI	GACNNNGTC	1 cut(s)	2629
PvuII	CAGCTG	2 cut(s)	1040, 1622
RruI	TCGCGA	1 cut(s)	90
RsaI	GTAC	7 cut(s)	146, 1429, 1712, 2574, 2772, 2944, 3006
RsaNI	GTAC	7 cut(s)	145, 1428, 1711, 2573, 2771, 2943, 3005
RseI	CAYNNNNRTG	4 cut(s)	846, 2643, 2682, 3075
SacI	GAGCTC	1 cut(s)	138
SacII	CCGCGG	1 cut(s)	329
SaqAI	TTAA	8 cut(s)	185, 1329, 1361, 1383, 2820, 2891, 3054, 3063
Sau96I	GGNCC	9 cut(s)	160, 1367, 1601, 1693, 1964, 1991, 2473, 2920, 2983
ScaI	AGTACT	1 cut(s)	1712
SchI	GAGTC	2 cut(s)	206, 1016
ScrFI	CCNGG	9 cut(s)	513, 547, 597, 1377, 1679, 1742, 1995, 2008, 2918
SduI	GDGCHC	5 cut(s)	138, 916, 1686, 2679, 2964
SfaNI	GCATC	9 cut(s)	760, 763, 773, 1352, 1556, 2372, 2572, 2876, 2925
SfcI	CTRYAG	4 cut(s)	768, 1026, 2454, 2723
Sfr303I	CCGCGG	1 cut(s)	329
SfuI	TTCGAA	1 cut(s)	350
SgrBI	CCGCGG	1 cut(s)	329
SinI	GGWCC	6 cut(s)	1367, 1601, 1693, 1991, 2473, 2983
SmiMI	CAYNNNNRTG	4 cut(s)	846, 2643, 2682, 3075
SmlI	CTYRAG	3 cut(s)	670, 1360, 1714
SmoI	CTYRAG	3 cut(s)	670, 1360, 1714
SphI	GCATGC	1 cut(s)	3176
SspMI	CTAG	6 cut(s)	693, 909, 918, 1034, 1598, 2129
SstI	GAGCTC	1 cut(s)	138
StyD4I	CCNGG	9 cut(s)	511, 545, 595, 1375, 1677, 1740, 1993, 2006, 2916
StyI	CCWWGG	2 cut(s)	382, 960
TaaI	ACNGT	4 cut(s)	172, 1427, 2015, 2631
TaiI	ACGT	1 cut(s)	3121
TaqI	TCGA	6 cut(s)	20, 174, 207, 350, 875, 2437
TaqII	GACCGA	2 cut(s)	275, 2327
TatI	WGTACW	4 cut(s)	144, 1710, 2770, 3004
TauI	GCSGC	3 cut(s)	331, 340, 343
TfiI	GAWTC	9 cut(s)	85, 316, 928, 1090, 1199, 1568, 1897, 2335, 2719
Tru1I	TTAA	8 cut(s)	185, 1329, 1361, 1383, 2820, 2891, 3054, 3063
Tru9I	TTAA	8 cut(s)	185, 1329, 1361, 1383, 2820, 2891, 3054, 3063
TscAI	CASTG	8 cut(s)	1276, 1666, 2020, 2206, 2401, 2634, 2684, 2953
TseFI	GTSAC	5 cut(s)	4, 292, 492, 2623, 3026
Tsp45I	GTSAC	5 cut(s)	4, 292, 492, 2623, 3026
TspGWI	ACGGA	1 cut(s)	1926
TspRI	CASTG	8 cut(s)	1276, 1666, 2020, 2206, 2401, 2634, 2684, 2953
Tth111I	GACNNNGTC	1 cut(s)	2629
Van91I	CCANNNNNTGG	3 cut(s)	518, 938, 1925
Vha464I	CTTAAG	1 cut(s)	1360
VpaK11BI	GGWCC	6 cut(s)	1367, 1601, 1693, 1991, 2473, 2983
VspI	ATTAAT	1 cut(s)	1329
XagI	CCTNNNNNAGG	1 cut(s)	1374
XapI	RAATTY	7 cut(s)	1107, 1177, 1207, 1606, 2098, 2110, 2861
XceI	RCATGY	5 cut(s)	1939, 2189, 2405, 2780, 3176
XmiI	GTMKAC	2 cut(s)	1422, 3092
XmnI	GAANNNNTTC	1 cut(s)	952
XspI	CTAG	6 cut(s)	693, 909, 918, 1034, 1598, 2129
ZrmI	AGTACT	1 cut(s)	1712
Zsp2I	ATGCAT	1 cut(s)	706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.