Rh5DG464600

pumilio homolog

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
73720751 .. 73729085
8335 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG464600.1

Sequence Viewer

Length: 2565 bp
ATGTTGTCTGAATTGGGGAGAAGGCCAATGCTTGGAGGTAACGAGGGTTCGTTTGGGGATGAATTTGAGAAGGAGATTGGTATGTTGCTTAGGGAGCAGCGTCGGCAGGAGGCTGATGATCGTGAGAGTGACCTGAATATTTACAGGAGTGGGTCGGCGCCGCCGACTGTGGAGGGTTCTTTGAATGCGGTGGGAGGGTTGTTTGCTGGCGGTGGCGGTGGAAGTGGAGGTGGAGGGGGAGGGGGAGGGGGAGGAGGGGGTGTTGGCGGTGGTGGGGGTGCTGGGTCTGTTCTTTCGGAGTTTCCTGGAGCTAAGAATGGGAATGGGTTTGCGTCGGAGGAGGAGCTGAGGTCTGATCCAGCTTATCTGCAATACTATTACTCGAATGTGAATCTGAATCCGAGGCTTCCGCCTCCTTTGTTGTCGAAGGAGGATTGGAGGTATGCACAGAGGATGAAAGGAGGGAGTTCTGTTTTGGGTGGGATTGGGGACAGGAGGAAAGTGAACAGGGCTGATGATGCTAGTGGTGGGAGATCCATGTTTTCGATGCCGCCAGGGTTTAACTCGAGGAAACAAGAGAGTGAGGTGGAGCCGGACAAAGTGCGTGGCTCAGCGGAGTGGGGTGTTGATGGGCTAATCGGTTTGCCAGGTTTAGGACTTGGCAACAAGCAAAAAAGCCTTGCTGAAATCTTTCAGGATGACTTGGGGCGTACGACTCCTGTTCCTGGGCTTCCTTCTCGTCCAGCCAGCCGTAATGCATTTGATGAAAATGTTGAGGGACTTGGTTCTGCTGAAGCAGACCTGGCTCATTTGCGCCGTGACTTGATGACATCTGATGCTCTAAGATCTGGTGCAAATGGCCAGGGCATGTCTGCAGCCCAAAGCATGGGCCCACCTTCTTCATACTCCTATGCTGCAGCTCTAGGTGCTTCCTTGTCAAGAAGCACCACTCCTGATCCTCAGATTGTTGCTAGGGCTCCTAGTCCTTGCCTTACACCTATTGGAGGAGGAAGAGTTAGTGCTTCAGAAAAGAGAGGCATTTCTAGTCCAAGCTCCTTTAATGCTGTCTCATCTGGCATTAATGAGTCTGGAGATCTGGTAGCTGCCTTATCCACCATGAATTTGTCTTCAAATGGTGTAATAGATGATGATCACCATTTGCCATCACAGATCAAACAGGATGTGATTGATCACCAGAATTATCTCTTTGGTCTGCAAGGTGCTGATAGTCATGCTAAGCAACTTGCTTACTTAAAGAAGTCTGAATCTGGGAATATACATATGCCTTCGCCACAGTCGGCAAAAGGTTCGTACTCGGATTTGGGTAAGAGCAATGGGGGTGGGTCAGATCTGAACAACTCATCCCCTGACAGGCAAGTTGAGCTGCAAAAATCTGCTGTTCCTTCTAGTAACTTGTATAAAGGATCATCTGCATCGAATCTTAATGGTGGAGGTGGATTGCATAATCAGTATCAGCAAGTGGATAATGCAAATTCATCATTTTCTAACTATGGTTTAAGTGGCTACTCTATGAATCCAGCCTTGGCATCCATGGTGGCTAGCCAACTTGGTACTGGTAATCTGCCTCCTCTGTTTGAAAATGTTGCTGCAGCATCAGCTATGGTACCTCCTGGAATGGATTCAAGAGTACTTGGAGGGGGTTTGGCTTCTGGACCAAACCTAGCAGCTGCTGCATCTGATTCACATAATCTTGGTAGATTAGGGAGTCCGATTGCGGGGACCGGTCTCCAGGCGCCTTATGTTGATCCTATGTATCTTCAATACTTGAGGACATCAGAGTATGCTGCAGCACAGCTTGCTGCCCTGAATGATCCTTCTGTGGATAGGAACTACTTAGGTAATTCATACATGAATTTACTTGAACTTCAAAAGGCGTATCTTGGAGCCTTGCTGTCACCTCAGAAGTCACAGTATGGTGTTGGTGTTCCCTTGGGGGGTAAGACTGGTGGTTCAAATCATCATGGTTATTATGGAAATCATGCCTTTGGCATGTCTTATCCAGGAAGTCCCATGGCAAGTCCCGTTATTCCCAACTCTCCAGTTGCCCCAGGTAGTCCAATGAGGCACAATGATCTTAATATGTGTTATCCTTCTGGGATGAGGAATTTGAATTTGGGTGGGAGTGTCATGGGACCATGGCATCTGGATTCTGGTTGTAACATAGATGAGACCTTTGCATCATCACTCTTAGAAGAGTTTAAGAGCAACAAAGCCAAGTCTTTTGAACTTTTGGAAATCGGAGGACATGTTGTGGAATTCAGTGCGGATCAATACGGGAGTCGGTTTATTCAACAAAAACTTGAAACAGCCACTACGGATGAGAAAAACATGGTTTACCAGGAAATCATGCCTCAAGCTCTTGCTCTAATGACTGATGTGTTTGGTAATTATGTGATTCAAAAGTTTTTTGAGCACGGGCTTCCATCTCAAAGAAGGGAATTGGCCAACAAGCTTTTTGGTCATGTGCTGACACTTAGCCTTCAAATGTATGGTTGTCGGGTGATACAGAAGGTACCAATAATTTGCTACTGTTGCTGTTGCTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

854

Amino Acids

89.58

Weight (kDa)

5.73

Isoelectric Point (pI)

55.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NABP PF07990 325 - 750 4.6e-172 Nucleic acid binding protein NABP
PUF PF00806 756 - 790 2.2e-10 Pumilio-family RNA binding repeat
PUF PF00806 794 - 825 9.7e-08 Pumilio-family RNA binding repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 1624, 2533
AccB1I GGYRCC 4 cut(s) 157, 1624, 1753, 2533
AccB7I CCANNNNNTGG 2 cut(s) 32, 886
AclWI GGATC 7 cut(s) 350, 528, 950, 1432, 1760, 1826, 2295
AcoI YGGCCR 2 cut(s) 859, 2463
AcsI RAATTY 7 cut(s) 62, 1120, 1492, 1873, 2125, 2131, 2276
AcuI CTGAAG 2 cut(s) 813, 1008
AcyI GRCGYC 2 cut(s) 158, 1754
AfaI GTAC 6 cut(s) 712, 1313, 1573, 1626, 1650, 2535
AfiI CCNNNNNNNGG 8 cut(s) 32, 653, 725, 886, 1004, 1371, 1736, 1955
AflIII ACRYGT 1 cut(s) 2266
AgeI ACCGGT 1 cut(s) 1742
AjuI GAANNNNNNNTTGG 4 cut(s) 1526, 1558, 2117, 2149
AloI GAACNNNNNNTCC 2 cut(s) 1346, 1378
Alw21I GWGCWC 1 cut(s) 2436
Alw26I GTCTC 3 cut(s) 1072, 1751, 2183
AlwI GGATC 7 cut(s) 350, 528, 950, 1432, 1760, 1826, 2295
AlwNI CAGNNNCTG 1 cut(s) 1691
Ama87I CYCGRG 1 cut(s) 565
AoxI GGCC 4 cut(s) 23, 859, 889, 2463
ApaI GGGCCC 1 cut(s) 893
ApoI RAATTY 7 cut(s) 62, 1120, 1492, 1873, 2125, 2131, 2276
AseI ATTAAT 1 cut(s) 1080
AsiGI ACCGGT 1 cut(s) 1742
Asp700I GAANNNNTTC 2 cut(s) 690, 1639
Asp718I GGTACC 2 cut(s) 1624, 2533
AspLEI GCGC 3 cut(s) 160, 816, 1756
AspS9I GGNCC 5 cut(s) 889, 890, 1673, 1740, 2153
AsuHPI GGTGA 4 cut(s) 1145, 1184, 1908, 2533
AsuNHI GCTAGC 1 cut(s) 1559
AvaI CYCGRG 1 cut(s) 565
AvaII GGWCC 3 cut(s) 1673, 1740, 2153
BaeGI GKGCMC 1 cut(s) 893
BalI TGGCCA 2 cut(s) 861, 2465
BanI GGYRCC 4 cut(s) 157, 1624, 1753, 2533
BanII GRGCYC 2 cut(s) 893, 979
BbsI GAAGAC 1 cut(s) 1119
Bbv12I GWGCWC 1 cut(s) 2436
BbvCI CCTCAGC 1 cut(s) 347
BccI CCATC 3 cut(s) 623, 1171, 2452
BceAI ACGGC 2 cut(s) 735, 801
BcgI CGANNNNNNTGC 2 cut(s) 1290, 1324
BclI TGATCA 2 cut(s) 1150, 1189
BcoDI GTCTC 3 cut(s) 1072, 1751, 2183
BfaI CTAG 9 cut(s) 522, 923, 972, 981, 1044, 1407, 1560, 1682, 2563
BfmI CTRYAG 4 cut(s) 873, 915, 1608, 1806
BfoI RGCGCY 2 cut(s) 161, 1757
BglII AGATCT 3 cut(s) 845, 1093, 1348
BlpI GCTNAGC 2 cut(s) 610, 1236
BmcAI AGTACT 1 cut(s) 1650
Bme18I GGWCC 3 cut(s) 1673, 1740, 2153
BmeT110I CYCGRG 1 cut(s) 565
BmgT120I GGNCC 5 cut(s) 889, 890, 1673, 1740, 2153
BmsI GCATC 9 cut(s) 508, 537, 826, 1442, 1556, 1622, 1703, 2170, 2207
BmtI GCTAGC 1 cut(s) 1563
BpiI GAAGAC 1 cut(s) 1119
BpmI CTGGAG 4 cut(s) 327, 1110, 1733, 2043
Bpu10I CCTNAGC 2 cut(s) 89, 347
Bpu1102I GCTNAGC 2 cut(s) 610, 1236
BpuEI CTTGAG 2 cut(s) 1807, 2358
BsaBI GATNNNNATC 1 cut(s) 1149
BsaHI GRCGYC 2 cut(s) 158, 1754
BsaI GGTCTC 2 cut(s) 1751, 2183
BsaWI WCCGGW 1 cut(s) 1742
Bsc4I CCNNNNNNNGG 8 cut(s) 32, 653, 725, 886, 1004, 1371, 1736, 1955
Bse118I RCCGGY 1 cut(s) 1742
Bse1I ACTGG 3 cut(s) 1579, 1969, 2060
Bse3DI GCAATG 1 cut(s) 1339
Bse8I GATNNNNATC 1 cut(s) 1149
BseGI GGATG 8 cut(s) 64, 459, 703, 1186, 1361, 1547, 2124, 2344
BseJI GATNNNNATC 1 cut(s) 1149
BseLI CCNNNNNNNGG 8 cut(s) 32, 653, 725, 886, 1004, 1371, 1736, 1955
BseMI GCAATG 1 cut(s) 1339
BseMII CTCAG 4 cut(s) 338, 624, 974, 1934
BseNI ACTGG 3 cut(s) 1579, 1969, 2060
BseRI GAGGAG 5 cut(s) 267, 353, 356, 1020, 1578
BseSI GKGCMC 1 cut(s) 893
BseYI CCCAGC 1 cut(s) 281
BshFI GGCC 4 cut(s) 25, 861, 891, 2465
BshNI GGYRCC 4 cut(s) 157, 1624, 1753, 2533
BshTI ACCGGT 1 cut(s) 1742
BsiHKAI GWGCWC 1 cut(s) 2436
BsiHKCI CYCGRG 1 cut(s) 565
BsiSI CCGG 2 cut(s) 593, 1743
BsiWI CGTACG 1 cut(s) 710
BslFI GGGAC 6 cut(s) 503, 792, 1753, 2013, 2025, 2166
BslI CCNNNNNNNGG 8 cut(s) 32, 653, 725, 886, 1004, 1371, 1736, 1955
BsmAI GTCTC 3 cut(s) 1072, 1751, 2183
BsmFI GGGAC 6 cut(s) 503, 792, 1753, 2013, 2025, 2166
BsmI GAATGC 1 cut(s) 190
BsnI GGCC 4 cut(s) 25, 861, 891, 2465
Bso31I GGTCTC 2 cut(s) 1751, 2183
BsoBI CYCGRG 1 cut(s) 565
Bsp120I GGGCCC 1 cut(s) 889
Bsp1286I GDGCHC 3 cut(s) 893, 979, 2436
Bsp1720I GCTNAGC 2 cut(s) 610, 1236
Bsp19I CCATGG 3 cut(s) 1551, 2031, 2156
BspANI GGCC 4 cut(s) 25, 861, 891, 2465
BspCNI CTCAG 4 cut(s) 339, 623, 973, 1933
BspMAI CTGCAG 4 cut(s) 877, 919, 1612, 1810
BspOI GCTAGC 1 cut(s) 1563
BspPI GGATC 7 cut(s) 350, 528, 950, 1432, 1760, 1826, 2295
BspT107I GGYRCC 4 cut(s) 157, 1624, 1753, 2533
BspTNI GGTCTC 2 cut(s) 1751, 2183
BsrDI GCAATG 1 cut(s) 1339
BsrFI RCCGGY 1 cut(s) 1742
BsrI ACTGG 3 cut(s) 1579, 1969, 2060
BssAI RCCGGY 1 cut(s) 1742
BssNI GRCGYC 2 cut(s) 158, 1754
BssT1I CCWWGG 5 cut(s) 1542, 1551, 1950, 2031, 2156
Bst4CI ACNGT 4 cut(s) 169, 1296, 1932, 2552
Bst6I CTCTTC 2 cut(s) 1006, 2208
BstACI GRCGYC 2 cut(s) 158, 1754
BstAPI GCANNNNNTGC 2 cut(s) 1691, 1817
BstC8I GCNNGC 4 cut(s) 208, 748, 1561, 1818
BstDSI CCRYGG 3 cut(s) 1551, 2031, 2156
BstENI CCTNNNNNAGG 1 cut(s) 1002
BstF5I GGATG 8 cut(s) 64, 459, 703, 1186, 1361, 1547, 2124, 2344
BstH2I RGCGCY 2 cut(s) 161, 1757
BstHHI GCGC 3 cut(s) 160, 816, 1756
BstMAI GTCTC 3 cut(s) 1072, 1751, 2183
BstNSI RCATGY 3 cut(s) 871, 2014, 2270
BstSFI CTRYAG 4 cut(s) 873, 915, 1608, 1806
BstSLI GKGCMC 1 cut(s) 893
BstV2I GAAGAC 1 cut(s) 1119
BstX2I RGATCY 4 cut(s) 533, 845, 1093, 1348
BstYI RGATCY 4 cut(s) 533, 845, 1093, 1348
BsuRI GGCC 4 cut(s) 25, 861, 891, 2465
BtgI CCRYGG 3 cut(s) 1551, 2031, 2156
BtsCI GGATG 8 cut(s) 64, 459, 703, 1186, 1361, 1547, 2124, 2344
BtsIMutI CAGTG 1 cut(s) 2287
Cac8I GCNNGC 4 cut(s) 208, 748, 1561, 1818
CaiI CAGNNNCTG 1 cut(s) 1691
CfoI GCGC 3 cut(s) 160, 816, 1756
Cfr10I RCCGGY 1 cut(s) 1742
Cfr13I GGNCC 5 cut(s) 889, 890, 1673, 1740, 2153
CseI GACGC 2 cut(s) 89, 321
Csp6I GTAC 6 cut(s) 711, 1312, 1572, 1625, 1649, 2534
CspAI ACCGGT 1 cut(s) 1742
CspCI CAANNNNNGTGG 4 cut(s) 586, 621, 1321, 1356
CviQI GTAC 6 cut(s) 711, 1312, 1572, 1625, 1649, 2534
DinI GGCGCC 2 cut(s) 159, 1755
EaeI YGGCCR 2 cut(s) 859, 2463
Eam1104I CTCTTC 2 cut(s) 1006, 2208
EarI CTCTTC 2 cut(s) 1006, 2208
EciI GGCGGA 1 cut(s) 399
Eco130I CCWWGG 5 cut(s) 1542, 1551, 1950, 2031, 2156
Eco24I GRGCYC 2 cut(s) 893, 979
Eco31I GGTCTC 2 cut(s) 1751, 2183
Eco47I GGWCC 3 cut(s) 1673, 1740, 2153
Eco57I CTGAAG 2 cut(s) 813, 1008
Eco88I CYCGRG 1 cut(s) 565
EcoNI CCTNNNNNAGG 1 cut(s) 1002
EcoRI GAATTC 1 cut(s) 2276
EcoT14I CCWWGG 5 cut(s) 1542, 1551, 1950, 2031, 2156
EcoT22I ATGCAT 1 cut(s) 760
EcoT38I GRGCYC 2 cut(s) 893, 979
EgeI GGCGCC 2 cut(s) 159, 1755
EheI GGCGCC 2 cut(s) 159, 1755
ErhI CCWWGG 5 cut(s) 1542, 1551, 1950, 2031, 2156
FaqI GGGAC 6 cut(s) 503, 792, 1753, 2013, 2025, 2166
FauI CCCGC 1 cut(s) 1729
FauNDI CATATG 1 cut(s) 1281
FbaI TGATCA 2 cut(s) 1150, 1189
FokI GGATG 8 cut(s) 71, 466, 710, 1193, 1348, 1534, 2131, 2351
FriOI GRGCYC 2 cut(s) 893, 979
FspBI CTAG 9 cut(s) 522, 923, 972, 981, 1044, 1407, 1560, 1682, 2563
GlaI GCGC 3 cut(s) 159, 815, 1755
GsaI CCCAGC 1 cut(s) 285
GsuI CTGGAG 4 cut(s) 327, 1110, 1733, 2043
HaeII RGCGCY 2 cut(s) 161, 1757
HaeIII GGCC 4 cut(s) 25, 861, 891, 2465
HapII CCGG 2 cut(s) 593, 1743
HgaI GACGC 2 cut(s) 89, 321
HhaI GCGC 3 cut(s) 160, 816, 1756
Hin1I GRCGYC 2 cut(s) 158, 1754
Hin6I GCGC 3 cut(s) 158, 814, 1754
HinP1I GCGC 3 cut(s) 158, 814, 1754
HindIII AAGCTT 1 cut(s) 2471
HpaII CCGG 2 cut(s) 593, 1743
HphI GGTGA 4 cut(s) 1145, 1184, 1908, 2533
Hpy166II GTNNAC 2 cut(s) 505, 2356
Hpy188III TCNNGA 8 cut(s) 122, 695, 939, 953, 1089, 1644, 1671, 2165
Hpy8I GTNNAC 2 cut(s) 505, 2356
Hpy99I CGWCG 2 cut(s) 105, 337
HpyCH4III ACNGT 4 cut(s) 169, 1296, 1932, 2552
Hsp92I GRCGYC 2 cut(s) 158, 1754
HspAI GCGC 3 cut(s) 158, 814, 1754
KasI GGCGCC 2 cut(s) 157, 1753
KpnI GGTACC 2 cut(s) 1628, 2537
Ksp22I TGATCA 2 cut(s) 1150, 1189
LmnI GCTCC 7 cut(s) 94, 308, 343, 589, 982, 1058, 1904
LweI GCATC 9 cut(s) 508, 537, 826, 1442, 1556, 1622, 1703, 2170, 2207
MaeI CTAG 9 cut(s) 522, 923, 972, 981, 1044, 1407, 1560, 1682, 2563
MaeIII GTNAC 7 cut(s) 38, 128, 818, 1409, 1914, 1926, 2177
MboII GAAGA 5 cut(s) 891, 1023, 1119, 1769, 2225
MflI RGATCY 4 cut(s) 533, 845, 1093, 1348
MhlI GDGCHC 3 cut(s) 893, 979, 2436
MlsI TGGCCA 2 cut(s) 861, 2465
MluNI TGGCCA 2 cut(s) 861, 2465
Mly113I GGCGCC 2 cut(s) 158, 1754
MlyI GAGTC 4 cut(s) 709, 1094, 1735, 2308
MmeI TCCRAC 1 cut(s) 315
Mox20I TGGCCA 2 cut(s) 861, 2465
Mph1103I ATGCAT 1 cut(s) 760
MroXI GAANNNNTTC 2 cut(s) 690, 1639
MscI TGGCCA 2 cut(s) 861, 2465
MseI TTAA 8 cut(s) 561, 1059, 1080, 1253, 1443, 1517, 2097, 2220
Msp20I TGGCCA 2 cut(s) 861, 2465
MspA1I CMGCKG 2 cut(s) 614, 1688
MspI CCGG 2 cut(s) 593, 1743
Mva1269I GAATGC 1 cut(s) 190
NarI GGCGCC 2 cut(s) 158, 1754
NcoI CCATGG 3 cut(s) 1551, 2031, 2156
NdeI CATATG 1 cut(s) 1281
NheI GCTAGC 1 cut(s) 1559
NmuCI GTSAC 4 cut(s) 128, 818, 1914, 1926
NsiI ATGCAT 1 cut(s) 760
NspI RCATGY 3 cut(s) 871, 2014, 2270
PaeR7I CTCGAG 1 cut(s) 565
PciI ACATGT 1 cut(s) 2266
PcsI WCGNNNNNNNCGW 1 cut(s) 161
PctI GAATGC 1 cut(s) 190
PdmI GAANNNNTTC 2 cut(s) 690, 1639
PfeI GAWTC 9 cut(s) 391, 397, 1265, 1438, 1534, 1640, 1700, 2168, 2416
Pfl23II CGTACG 1 cut(s) 710
PflMI CCANNNNNTGG 2 cut(s) 32, 886
PfoI TCCNGGA 3 cut(s) 304, 1630, 2020
PinAI ACCGGT 1 cut(s) 1742
PleI GAGTC 4 cut(s) 709, 1093, 1734, 2307
PluTI GGCGCC 2 cut(s) 161, 1757
PpsI GAGTC 4 cut(s) 709, 1093, 1734, 2307
PscI ACATGT 1 cut(s) 2266
PshBI ATTAAT 1 cut(s) 1080
PspFI CCCAGC 1 cut(s) 281
PspLI CGTACG 1 cut(s) 710
PspOMI GGGCCC 1 cut(s) 889
PspPI GGNCC 5 cut(s) 889, 890, 1673, 1740, 2153
PspXI VCTCGAGB 1 cut(s) 565
PsrI GAACNNNNNNTAC 2 cut(s) 31, 63
PstI CTGCAG 4 cut(s) 877, 919, 1612, 1810
PstNI CAGNNNCTG 1 cut(s) 1691
PsuI RGATCY 4 cut(s) 533, 845, 1093, 1348
PvuII CAGCTG 1 cut(s) 1688
RsaI GTAC 6 cut(s) 712, 1313, 1573, 1626, 1650, 2535
RsaNI GTAC 6 cut(s) 711, 1312, 1572, 1625, 1649, 2534
SaqAI TTAA 8 cut(s) 561, 1059, 1080, 1253, 1443, 1517, 2097, 2220
Sau96I GGNCC 5 cut(s) 889, 890, 1673, 1740, 2153
ScaI AGTACT 1 cut(s) 1650
SchI GAGTC 4 cut(s) 709, 1094, 1735, 2308
SduI GDGCHC 3 cut(s) 893, 979, 2436
SfaNI GCATC 9 cut(s) 508, 537, 826, 1442, 1556, 1622, 1703, 2170, 2207
SfcI CTRYAG 4 cut(s) 873, 915, 1608, 1806
SfoI GGCGCC 2 cut(s) 159, 1755
Sfr274I CTCGAG 1 cut(s) 565
SinI GGWCC 3 cut(s) 1673, 1740, 2153
SlaI CTCGAG 1 cut(s) 565
SmlI CTYRAG 3 cut(s) 565, 1786, 2373
SmoI CTYRAG 3 cut(s) 565, 1786, 2373
SspDI GGCGCC 2 cut(s) 157, 1753
SspI AATATT 1 cut(s) 139
SspMI CTAG 9 cut(s) 522, 923, 972, 981, 1044, 1407, 1560, 1682, 2563
StyI CCWWGG 5 cut(s) 1542, 1551, 1950, 2031, 2156
TaaI ACNGT 4 cut(s) 169, 1296, 1932, 2552
TaqI TCGA 5 cut(s) 383, 425, 545, 566, 1436
TatI WGTACW 1 cut(s) 1648
TauI GCSGC 2 cut(s) 163, 553
TfiI GAWTC 9 cut(s) 391, 397, 1265, 1438, 1534, 1640, 1700, 2168, 2416
Tru1I TTAA 8 cut(s) 561, 1059, 1080, 1253, 1443, 1517, 2097, 2220
Tru9I TTAA 8 cut(s) 561, 1059, 1080, 1253, 1443, 1517, 2097, 2220
TscAI CASTG 1 cut(s) 2287
TseFI GTSAC 4 cut(s) 128, 818, 1914, 1926
Tsp45I GTSAC 4 cut(s) 128, 818, 1914, 1926
TspDTI ATGAA 9 cut(s) 75, 470, 780, 891, 1133, 1485, 1547, 1854, 1886
TspGWI ACGGA 1 cut(s) 2351
TspRI CASTG 1 cut(s) 2287
Van91I CCANNNNNTGG 2 cut(s) 32, 886
VpaK11BI GGWCC 3 cut(s) 1673, 1740, 2153
VspI ATTAAT 1 cut(s) 1080
XagI CCTNNNNNAGG 1 cut(s) 1002
XapI RAATTY 7 cut(s) 62, 1120, 1492, 1873, 2125, 2131, 2276
XceI RCATGY 3 cut(s) 871, 2014, 2270
XcmI CCANNNNNNNNNTGG 1 cut(s) 1571
XhoI CTCGAG 1 cut(s) 565
XmnI GAANNNNTTC 2 cut(s) 690, 1639
XspI CTAG 9 cut(s) 522, 923, 972, 981, 1044, 1407, 1560, 1682, 2563
ZrmI AGTACT 1 cut(s) 1650
Zsp2I ATGCAT 1 cut(s) 760
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.