pumilio homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G29140 AT2G29140 AT2G29190 AT2G29190 AT2G29200 AT2G29200 |
| fragaria_vesca | FvH4_3g36870 FvH4_7g22880 FvH4_7g22880 |
| malus_domestica | MD01G1136900.v1.1 MD03G1087000.v1.1 MD07G1201900.v1.1 MD11G1096100.v1.1 |
| prunus_persica | Prupe.2G238500_v2.0.a1 Prupe.2G238500_v2.0.a1 Prupe.6G071600_v2.0.a1 |
| pyrus_communis | pycom01g15770 pycom07g18890 pycom11g08140 |
| rosa_chinensis | RchiOBHm_Chr1g0368031 RchiOBHm_Chr5g0066091 |
| rosa_laevigata | RLG00000027244 RLG00000035840 |
| rosa_multiflora | Rmu_sc0002406.1_g000007 Rmu_sc0011946.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00014920 Rroxscaffold_4G00288920 |
| rosa_rugosa | Rorug01G0338500 Rorug05G0376200 |
| rosa_samantha | Rh1AG345400 Rh1BG307700 Rh1CG323300 Rh1DG339800 Rh5AG434700 Rh5BG451000 Rh5CG473300 Rh5DG464600 |
| rosa_wichuraiana | Rw1G030740 Rw5G040710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 2 cut(s) | 1630, 2539 |
| AccB1I | GGYRCC | 4 cut(s) | 157, 1630, 1759, 2539 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 32, 892 |
| AciI | CCGC | 9 cut(s) | 161, 188, 210, 273, 416, 557, 620, 1742, 2291 |
| AclWI | GGATC | 7 cut(s) | 356, 534, 956, 1438, 1766, 1832, 2301 |
| AcoI | YGGCCR | 2 cut(s) | 865, 2469 |
| AcsI | RAATTY | 7 cut(s) | 62, 1126, 1498, 1879, 2131, 2137, 2282 |
| AcuI | CTGAAG | 2 cut(s) | 819, 1014 |
| AcyI | GRCGYC | 2 cut(s) | 158, 1760 |
| AfaI | GTAC | 6 cut(s) | 718, 1319, 1579, 1632, 1656, 2541 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 32, 659, 731, 892, 1010, 1377, 1742, 1961 |
| AflIII | ACRYGT | 1 cut(s) | 2272 |
| AgeI | ACCGGT | 1 cut(s) | 1748 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1532, 1564, 2123, 2155 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1352, 1384 |
| Alw21I | GWGCWC | 1 cut(s) | 2442 |
| Alw26I | GTCTC | 3 cut(s) | 1078, 1757, 2189 |
| AlwI | GGATC | 7 cut(s) | 356, 534, 956, 1438, 1766, 1832, 2301 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1697 |
| Ama87I | CYCGRG | 1 cut(s) | 571 |
| AoxI | GGCC | 4 cut(s) | 23, 865, 895, 2469 |
| ApaI | GGGCCC | 1 cut(s) | 899 |
| ApoI | RAATTY | 7 cut(s) | 62, 1126, 1498, 1879, 2131, 2137, 2282 |
| AseI | ATTAAT | 1 cut(s) | 1086 |
| AsiGI | ACCGGT | 1 cut(s) | 1748 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 696, 1645 |
| Asp718I | GGTACC | 2 cut(s) | 1630, 2539 |
| AspLEI | GCGC | 3 cut(s) | 160, 822, 1762 |
| AspS9I | GGNCC | 5 cut(s) | 895, 896, 1679, 1746, 2159 |
| AsuHPI | GGTGA | 4 cut(s) | 1151, 1190, 1914, 2539 |
| AsuNHI | GCTAGC | 1 cut(s) | 1565 |
| AvaI | CYCGRG | 1 cut(s) | 571 |
| AvaII | GGWCC | 3 cut(s) | 1679, 1746, 2159 |
| BaeGI | GKGCMC | 1 cut(s) | 899 |
| BalI | TGGCCA | 2 cut(s) | 867, 2471 |
| BanI | GGYRCC | 4 cut(s) | 157, 1630, 1759, 2539 |
| BanII | GRGCYC | 2 cut(s) | 899, 985 |
| BbsI | GAAGAC | 1 cut(s) | 1125 |
| Bbv12I | GWGCWC | 1 cut(s) | 2442 |
| BbvCI | CCTCAGC | 1 cut(s) | 353 |
| BccI | CCATC | 3 cut(s) | 629, 1177, 2458 |
| BceAI | ACGGC | 2 cut(s) | 741, 807 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1296, 1330 |
| BclI | TGATCA | 2 cut(s) | 1156, 1195 |
| BcoDI | GTCTC | 3 cut(s) | 1078, 1757, 2189 |
| BfaI | CTAG | 9 cut(s) | 528, 929, 978, 987, 1050, 1413, 1566, 1688, 2569 |
| BfmI | CTRYAG | 4 cut(s) | 879, 921, 1614, 1812 |
| BfoI | RGCGCY | 2 cut(s) | 161, 1763 |
| BglII | AGATCT | 3 cut(s) | 851, 1099, 1354 |
| BlpI | GCTNAGC | 2 cut(s) | 616, 1242 |
| BmcAI | AGTACT | 1 cut(s) | 1656 |
| Bme18I | GGWCC | 3 cut(s) | 1679, 1746, 2159 |
| BmeT110I | CYCGRG | 1 cut(s) | 571 |
| BmgT120I | GGNCC | 5 cut(s) | 895, 896, 1679, 1746, 2159 |
| BmsI | GCATC | 9 cut(s) | 514, 543, 832, 1448, 1562, 1628, 1709, 2176, 2213 |
| BmtI | GCTAGC | 1 cut(s) | 1569 |
| BpiI | GAAGAC | 1 cut(s) | 1125 |
| BpmI | CTGGAG | 4 cut(s) | 333, 1116, 1739, 2049 |
| Bpu10I | CCTNAGC | 2 cut(s) | 89, 353 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 616, 1242 |
| BpuEI | CTTGAG | 2 cut(s) | 1813, 2364 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1155 |
| BsaHI | GRCGYC | 2 cut(s) | 158, 1760 |
| BsaI | GGTCTC | 2 cut(s) | 1757, 2189 |
| BsaWI | WCCGGW | 1 cut(s) | 1748 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 32, 659, 731, 892, 1010, 1377, 1742, 1961 |
| Bse118I | RCCGGY | 1 cut(s) | 1748 |
| Bse1I | ACTGG | 3 cut(s) | 1585, 1975, 2066 |
| Bse3DI | GCAATG | 1 cut(s) | 1345 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1155 |
| BseGI | GGATG | 8 cut(s) | 64, 465, 709, 1192, 1367, 1553, 2130, 2350 |
| BseJI | GATNNNNATC | 1 cut(s) | 1155 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 32, 659, 731, 892, 1010, 1377, 1742, 1961 |
| BseMI | GCAATG | 1 cut(s) | 1345 |
| BseMII | CTCAG | 4 cut(s) | 344, 630, 980, 1940 |
| BseNI | ACTGG | 3 cut(s) | 1585, 1975, 2066 |
| BseRI | GAGGAG | 5 cut(s) | 273, 359, 362, 1026, 1584 |
| BseSI | GKGCMC | 1 cut(s) | 899 |
| BseYI | CCCAGC | 1 cut(s) | 287 |
| BshFI | GGCC | 4 cut(s) | 25, 867, 897, 2471 |
| BshNI | GGYRCC | 4 cut(s) | 157, 1630, 1759, 2539 |
| BshTI | ACCGGT | 1 cut(s) | 1748 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2442 |
| BsiHKCI | CYCGRG | 1 cut(s) | 571 |
| BsiSI | CCGG | 2 cut(s) | 599, 1749 |
| BsiWI | CGTACG | 1 cut(s) | 716 |
| BslFI | GGGAC | 6 cut(s) | 509, 798, 1759, 2019, 2031, 2172 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 32, 659, 731, 892, 1010, 1377, 1742, 1961 |
| BsmAI | GTCTC | 3 cut(s) | 1078, 1757, 2189 |
| BsmFI | GGGAC | 6 cut(s) | 509, 798, 1759, 2019, 2031, 2172 |
| BsmI | GAATGC | 1 cut(s) | 190 |
| BsnI | GGCC | 4 cut(s) | 25, 867, 897, 2471 |
| Bso31I | GGTCTC | 2 cut(s) | 1757, 2189 |
| BsoBI | CYCGRG | 1 cut(s) | 571 |
| Bsp120I | GGGCCC | 1 cut(s) | 895 |
| Bsp1286I | GDGCHC | 3 cut(s) | 899, 985, 2442 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 616, 1242 |
| Bsp19I | CCATGG | 3 cut(s) | 1557, 2037, 2162 |
| BspACI | CCGC | 9 cut(s) | 161, 188, 210, 273, 416, 557, 620, 1742, 2291 |
| BspANI | GGCC | 4 cut(s) | 25, 867, 897, 2471 |
| BspCNI | CTCAG | 4 cut(s) | 345, 629, 979, 1939 |
| BspMAI | CTGCAG | 4 cut(s) | 883, 925, 1618, 1816 |
| BspOI | GCTAGC | 1 cut(s) | 1569 |
| BspPI | GGATC | 7 cut(s) | 356, 534, 956, 1438, 1766, 1832, 2301 |
| BspT107I | GGYRCC | 4 cut(s) | 157, 1630, 1759, 2539 |
| BspTNI | GGTCTC | 2 cut(s) | 1757, 2189 |
| BsrDI | GCAATG | 1 cut(s) | 1345 |
| BsrFI | RCCGGY | 1 cut(s) | 1748 |
| BsrI | ACTGG | 3 cut(s) | 1585, 1975, 2066 |
| BssAI | RCCGGY | 1 cut(s) | 1748 |
| BssNI | GRCGYC | 2 cut(s) | 158, 1760 |
| BssT1I | CCWWGG | 5 cut(s) | 1548, 1557, 1956, 2037, 2162 |
| Bst4CI | ACNGT | 4 cut(s) | 169, 1302, 1938, 2558 |
| Bst6I | CTCTTC | 2 cut(s) | 1012, 2214 |
| BstACI | GRCGYC | 2 cut(s) | 158, 1760 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1697, 1823 |
| BstC8I | GCNNGC | 4 cut(s) | 208, 754, 1567, 1824 |
| BstDSI | CCRYGG | 3 cut(s) | 1557, 2037, 2162 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1008 |
| BstF5I | GGATG | 8 cut(s) | 64, 465, 709, 1192, 1367, 1553, 2130, 2350 |
| BstH2I | RGCGCY | 2 cut(s) | 161, 1763 |
| BstHHI | GCGC | 3 cut(s) | 160, 822, 1762 |
| BstMAI | GTCTC | 3 cut(s) | 1078, 1757, 2189 |
| BstNSI | RCATGY | 3 cut(s) | 877, 2020, 2276 |
| BstSFI | CTRYAG | 4 cut(s) | 879, 921, 1614, 1812 |
| BstSLI | GKGCMC | 1 cut(s) | 899 |
| BstV2I | GAAGAC | 1 cut(s) | 1125 |
| BstX2I | RGATCY | 4 cut(s) | 539, 851, 1099, 1354 |
| BstYI | RGATCY | 4 cut(s) | 539, 851, 1099, 1354 |
| BsuRI | GGCC | 4 cut(s) | 25, 867, 897, 2471 |
| BtgI | CCRYGG | 3 cut(s) | 1557, 2037, 2162 |
| BtsCI | GGATG | 8 cut(s) | 64, 465, 709, 1192, 1367, 1553, 2130, 2350 |
| BtsIMutI | CAGTG | 1 cut(s) | 2293 |
| Cac8I | GCNNGC | 4 cut(s) | 208, 754, 1567, 1824 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1697 |
| CfoI | GCGC | 3 cut(s) | 160, 822, 1762 |
| Cfr10I | RCCGGY | 1 cut(s) | 1748 |
| Cfr13I | GGNCC | 5 cut(s) | 895, 896, 1679, 1746, 2159 |
| CseI | GACGC | 2 cut(s) | 89, 327 |
| Csp6I | GTAC | 6 cut(s) | 717, 1318, 1578, 1631, 1655, 2540 |
| CspAI | ACCGGT | 1 cut(s) | 1748 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 592, 627, 1327, 1362 |
| CviQI | GTAC | 6 cut(s) | 717, 1318, 1578, 1631, 1655, 2540 |
| DinI | GGCGCC | 2 cut(s) | 159, 1761 |
| EaeI | YGGCCR | 2 cut(s) | 865, 2469 |
| Eam1104I | CTCTTC | 2 cut(s) | 1012, 2214 |
| EarI | CTCTTC | 2 cut(s) | 1012, 2214 |
| EciI | GGCGGA | 1 cut(s) | 405 |
| Eco130I | CCWWGG | 5 cut(s) | 1548, 1557, 1956, 2037, 2162 |
| Eco24I | GRGCYC | 2 cut(s) | 899, 985 |
| Eco31I | GGTCTC | 2 cut(s) | 1757, 2189 |
| Eco47I | GGWCC | 3 cut(s) | 1679, 1746, 2159 |
| Eco57I | CTGAAG | 2 cut(s) | 819, 1014 |
| Eco88I | CYCGRG | 1 cut(s) | 571 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1008 |
| EcoRI | GAATTC | 1 cut(s) | 2282 |
| EcoT14I | CCWWGG | 5 cut(s) | 1548, 1557, 1956, 2037, 2162 |
| EcoT22I | ATGCAT | 1 cut(s) | 766 |
| EcoT38I | GRGCYC | 2 cut(s) | 899, 985 |
| EgeI | GGCGCC | 2 cut(s) | 159, 1761 |
| EheI | GGCGCC | 2 cut(s) | 159, 1761 |
| ErhI | CCWWGG | 5 cut(s) | 1548, 1557, 1956, 2037, 2162 |
| FaqI | GGGAC | 6 cut(s) | 509, 798, 1759, 2019, 2031, 2172 |
| FauI | CCCGC | 1 cut(s) | 1735 |
| FauNDI | CATATG | 1 cut(s) | 1287 |
| FbaI | TGATCA | 2 cut(s) | 1156, 1195 |
| FokI | GGATG | 8 cut(s) | 71, 472, 716, 1199, 1354, 1540, 2137, 2357 |
| FriOI | GRGCYC | 2 cut(s) | 899, 985 |
| FspBI | CTAG | 9 cut(s) | 528, 929, 978, 987, 1050, 1413, 1566, 1688, 2569 |
| GlaI | GCGC | 3 cut(s) | 159, 821, 1761 |
| GsaI | CCCAGC | 1 cut(s) | 291 |
| GsuI | CTGGAG | 4 cut(s) | 333, 1116, 1739, 2049 |
| HaeII | RGCGCY | 2 cut(s) | 161, 1763 |
| HaeIII | GGCC | 4 cut(s) | 25, 867, 897, 2471 |
| HapII | CCGG | 2 cut(s) | 599, 1749 |
| HgaI | GACGC | 2 cut(s) | 89, 327 |
| HhaI | GCGC | 3 cut(s) | 160, 822, 1762 |
| Hin1I | GRCGYC | 2 cut(s) | 158, 1760 |
| Hin6I | GCGC | 3 cut(s) | 158, 820, 1760 |
| HinP1I | GCGC | 3 cut(s) | 158, 820, 1760 |
| HindIII | AAGCTT | 1 cut(s) | 2477 |
| HpaII | CCGG | 2 cut(s) | 599, 1749 |
| HphI | GGTGA | 4 cut(s) | 1151, 1190, 1914, 2539 |
| Hpy166II | GTNNAC | 2 cut(s) | 511, 2362 |
| Hpy188III | TCNNGA | 8 cut(s) | 122, 701, 945, 959, 1095, 1650, 1677, 2171 |
| Hpy8I | GTNNAC | 2 cut(s) | 511, 2362 |
| Hpy99I | CGWCG | 2 cut(s) | 105, 343 |
| HpyCH4III | ACNGT | 4 cut(s) | 169, 1302, 1938, 2558 |
| Hsp92I | GRCGYC | 2 cut(s) | 158, 1760 |
| HspAI | GCGC | 3 cut(s) | 158, 820, 1760 |
| KasI | GGCGCC | 2 cut(s) | 157, 1759 |
| KpnI | GGTACC | 2 cut(s) | 1634, 2543 |
| Ksp22I | TGATCA | 2 cut(s) | 1156, 1195 |
| LmnI | GCTCC | 7 cut(s) | 94, 314, 349, 595, 988, 1064, 1910 |
| LweI | GCATC | 9 cut(s) | 514, 543, 832, 1448, 1562, 1628, 1709, 2176, 2213 |
| MaeI | CTAG | 9 cut(s) | 528, 929, 978, 987, 1050, 1413, 1566, 1688, 2569 |
| MaeIII | GTNAC | 7 cut(s) | 38, 128, 824, 1415, 1920, 1932, 2183 |
| MboII | GAAGA | 5 cut(s) | 897, 1029, 1125, 1775, 2231 |
| MflI | RGATCY | 4 cut(s) | 539, 851, 1099, 1354 |
| MhlI | GDGCHC | 3 cut(s) | 899, 985, 2442 |
| MlsI | TGGCCA | 2 cut(s) | 867, 2471 |
| MluNI | TGGCCA | 2 cut(s) | 867, 2471 |
| Mly113I | GGCGCC | 2 cut(s) | 158, 1760 |
| MlyI | GAGTC | 4 cut(s) | 715, 1100, 1741, 2314 |
| MmeI | TCCRAC | 1 cut(s) | 321 |
| Mox20I | TGGCCA | 2 cut(s) | 867, 2471 |
| Mph1103I | ATGCAT | 1 cut(s) | 766 |
| MroXI | GAANNNNTTC | 2 cut(s) | 696, 1645 |
| MscI | TGGCCA | 2 cut(s) | 867, 2471 |
| MseI | TTAA | 8 cut(s) | 567, 1065, 1086, 1259, 1449, 1523, 2103, 2226 |
| Msp20I | TGGCCA | 2 cut(s) | 867, 2471 |
| MspA1I | CMGCKG | 2 cut(s) | 620, 1694 |
| MspI | CCGG | 2 cut(s) | 599, 1749 |
| Mva1269I | GAATGC | 1 cut(s) | 190 |
| NarI | GGCGCC | 2 cut(s) | 158, 1760 |
| NcoI | CCATGG | 3 cut(s) | 1557, 2037, 2162 |
| NdeI | CATATG | 1 cut(s) | 1287 |
| NheI | GCTAGC | 1 cut(s) | 1565 |
| NmuCI | GTSAC | 4 cut(s) | 128, 824, 1920, 1932 |
| NsiI | ATGCAT | 1 cut(s) | 766 |
| NspI | RCATGY | 3 cut(s) | 877, 2020, 2276 |
| PaeR7I | CTCGAG | 1 cut(s) | 571 |
| PciI | ACATGT | 1 cut(s) | 2272 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 161 |
| PctI | GAATGC | 1 cut(s) | 190 |
| PdmI | GAANNNNTTC | 2 cut(s) | 696, 1645 |
| PfeI | GAWTC | 9 cut(s) | 397, 403, 1271, 1444, 1540, 1646, 1706, 2174, 2422 |
| Pfl23II | CGTACG | 1 cut(s) | 716 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 32, 892 |
| PfoI | TCCNGGA | 3 cut(s) | 310, 1636, 2026 |
| PinAI | ACCGGT | 1 cut(s) | 1748 |
| PleI | GAGTC | 4 cut(s) | 715, 1099, 1740, 2313 |
| PluTI | GGCGCC | 2 cut(s) | 161, 1763 |
| PpsI | GAGTC | 4 cut(s) | 715, 1099, 1740, 2313 |
| PscI | ACATGT | 1 cut(s) | 2272 |
| PshBI | ATTAAT | 1 cut(s) | 1086 |
| PspFI | CCCAGC | 1 cut(s) | 287 |
| PspLI | CGTACG | 1 cut(s) | 716 |
| PspOMI | GGGCCC | 1 cut(s) | 895 |
| PspPI | GGNCC | 5 cut(s) | 895, 896, 1679, 1746, 2159 |
| PspXI | VCTCGAGB | 1 cut(s) | 571 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 31, 63 |
| PstI | CTGCAG | 4 cut(s) | 883, 925, 1618, 1816 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1697 |
| PsuI | RGATCY | 4 cut(s) | 539, 851, 1099, 1354 |
| PvuII | CAGCTG | 1 cut(s) | 1694 |
| RsaI | GTAC | 6 cut(s) | 718, 1319, 1579, 1632, 1656, 2541 |
| RsaNI | GTAC | 6 cut(s) | 717, 1318, 1578, 1631, 1655, 2540 |
| SaqAI | TTAA | 8 cut(s) | 567, 1065, 1086, 1259, 1449, 1523, 2103, 2226 |
| Sau96I | GGNCC | 5 cut(s) | 895, 896, 1679, 1746, 2159 |
| ScaI | AGTACT | 1 cut(s) | 1656 |
| SchI | GAGTC | 4 cut(s) | 715, 1100, 1741, 2314 |
| SduI | GDGCHC | 3 cut(s) | 899, 985, 2442 |
| SfaNI | GCATC | 9 cut(s) | 514, 543, 832, 1448, 1562, 1628, 1709, 2176, 2213 |
| SfcI | CTRYAG | 4 cut(s) | 879, 921, 1614, 1812 |
| SfoI | GGCGCC | 2 cut(s) | 159, 1761 |
| Sfr274I | CTCGAG | 1 cut(s) | 571 |
| SinI | GGWCC | 3 cut(s) | 1679, 1746, 2159 |
| SlaI | CTCGAG | 1 cut(s) | 571 |
| SmlI | CTYRAG | 3 cut(s) | 571, 1792, 2379 |
| SmoI | CTYRAG | 3 cut(s) | 571, 1792, 2379 |
| SsiI | CCGC | 9 cut(s) | 161, 188, 210, 273, 416, 557, 620, 1742, 2291 |
| SspDI | GGCGCC | 2 cut(s) | 157, 1759 |
| SspI | AATATT | 1 cut(s) | 139 |
| SspMI | CTAG | 9 cut(s) | 528, 929, 978, 987, 1050, 1413, 1566, 1688, 2569 |
| StyI | CCWWGG | 5 cut(s) | 1548, 1557, 1956, 2037, 2162 |
| TaaI | ACNGT | 4 cut(s) | 169, 1302, 1938, 2558 |
| TaqI | TCGA | 5 cut(s) | 389, 431, 551, 572, 1442 |
| TatI | WGTACW | 1 cut(s) | 1654 |
| TauI | GCSGC | 2 cut(s) | 163, 559 |
| TfiI | GAWTC | 9 cut(s) | 397, 403, 1271, 1444, 1540, 1646, 1706, 2174, 2422 |
| Tru1I | TTAA | 8 cut(s) | 567, 1065, 1086, 1259, 1449, 1523, 2103, 2226 |
| Tru9I | TTAA | 8 cut(s) | 567, 1065, 1086, 1259, 1449, 1523, 2103, 2226 |
| TscAI | CASTG | 1 cut(s) | 2293 |
| TseFI | GTSAC | 4 cut(s) | 128, 824, 1920, 1932 |
| Tsp45I | GTSAC | 4 cut(s) | 128, 824, 1920, 1932 |
| TspDTI | ATGAA | 9 cut(s) | 75, 476, 786, 897, 1139, 1491, 1553, 1860, 1892 |
| TspGWI | ACGGA | 1 cut(s) | 2357 |
| TspRI | CASTG | 1 cut(s) | 2293 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 32, 892 |
| VpaK11BI | GGWCC | 3 cut(s) | 1679, 1746, 2159 |
| VspI | ATTAAT | 1 cut(s) | 1086 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1008 |
| XapI | RAATTY | 7 cut(s) | 62, 1126, 1498, 1879, 2131, 2137, 2282 |
| XceI | RCATGY | 3 cut(s) | 877, 2020, 2276 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1577 |
| XhoI | CTCGAG | 1 cut(s) | 571 |
| XmnI | GAANNNNTTC | 2 cut(s) | 696, 1645 |
| XspI | CTAG | 9 cut(s) | 528, 929, 978, 987, 1050, 1413, 1566, 1688, 2569 |
| ZrmI | AGTACT | 1 cut(s) | 1656 |
| Zsp2I | ATGCAT | 1 cut(s) | 766 |