Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0001977

Physical Location & Seq

Genomic Coordinates Forward (+)

26228665 .. 26230126

Gene Structure 1462 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G244400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1065 bp

ATGGCGAAATTCATCATTTTCAGCTGCAATTTCCCCTTGATTTTCCTCCTGTCTTCGTTCTATTTCCTGACCCTACAACCCATTTCCTCTTCATCACTCAAATCCCTAAACAACAACCCCAACTTTGATTCCGAAATTGCTCTCTTCGGCGACGCCGAGCCCGTAGACGCTGGCTCCTATGTCAACATTACCCGGCCATCGGTCTCAAGCTCCGGTCTTCTACTTCGCCAGAAGCCCTTCAAATTTCTCGATGCCAATCTCAGCAGCCCGACGTCGTTTTCCACGGAATTCACCTTCTCGATGACGCCTGGCAGTGGCGACGGCCTTTTACTGGTTTTGGCTTCCAAAGATTTTGGGTCCACATTCTCGGGTAAGGGCCCGTTTGGGCTTAACGGTGAGAATCGATTTCTGGGTATTGAATTTGACACTGAAATGAATGGAAATGTAAACGATTTAAATGCCAATCATATAGGGGTCGATGTGGGTAGCTTTGTATCTCTCACTGTTGGTAATGTTTCTTCATTGAATTTAGAGCTTAACAGTGGAGAAAAGTTGAAATCTTGGATTGATTATGTTGCTAGTTCGAAAAGATTGGAAATTAGGCTAAGTAAATTGGGTGAACCAAGGCCTTACAATCCGATTACGGCATACGGAATTGATTTGTTGGGAATGTGGAAAAATGAGGATGTGTATGTAGGTATTAGCTCTTCAAATTCGAATGGCAATTCGTCGCAGATTAGCAGTGTGTATTCATGGTCATTTAGGCTAAGAAACATTCCAAATTCAATGCATTCTCTTCCAGTGAATCCAAGGGGATATTTGGATGAGCATGGTGAGCATTTGAGTGTGCATAAGCGGCGTGTTTGTCCATTGACAGTTCTTGCTGGGATGATTTTCGTGACTGGTTGTGGAGCATTGGTGGCTTTTATGGTGCTGTTTTTGTGGGCTATTATCATTAGTAGGCACACGGTGTTCCCTGCTGAGTTTCCTGTGAAGCCTGTGGATTTCAGGTATGAGAAGATCAATGTAGTTGTAGAGAAGGATGCCGATAGTGTCAAGATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lectin_legB

Protein Analysis

355

Amino Acids

38.89

Weight (kDa)

6.09

Isoelectric Point (pI)

38.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001977)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09035 AT3G09190 AT5G01090
fragaria_vesca	FvH4_6g12300 FvH4_7g23770
malus_domestica	MD01G1145100.v1.1 MD07G1165700.v1.1 MD07G1211800.v1.1 MD12G1085400.v1.1
prunus_persica	Prupe.2G244400_v2.0.a1 Prupe.6G268200_v2.0.a1
pyrus_communis	pycom01g16450 pycom04g13040 pycom04g13050 pycom07g19500 pycom12g08030 pycom12g15000
rosa_chinensis	RchiOBHm_Chr1g0369101 RchiOBHm_Chr3g0464131
rosa_laevigata	RLG00000024720 RLG00000027158
rosa_multiflora	Rmu_sc0001552.1_g000037 Rmu_sc0003337.1_g000012 Rmu_sc0004250.1_g000019 Rmu_sc0010401.1_g000004
rosa_roxburghii	Rroxscaffold_4G00288000 Rroxscaffold_6G00415970
rosa_rugosa	Rorug01G0348100 Rorug03G0070700
rosa_samantha	Rh1AG354900 Rh1BG318200 Rh1BG335600 Rh1CG332600 Rh1DG348900 Rh2BG629000 Rh2CG320200 Rh2DG640800 Rh3BG132100 Rh3CG134300 Rh3DG133300 Rh4DG353800 Rh6BG239800 Rh7DG015800
rosa_wichuraiana	Rw1G031320 Rw3G010810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	275
AccI	GTMKAC	1 cut(s)	165
AciI	CCGC	1 cut(s)	856
AcoI	YGGCCR	1 cut(s)	194
AcsI	RAATTY	7 cut(s)	8, 242, 287, 419, 526, 712, 781
AcyI	GRCGYC	3 cut(s)	153, 272, 305
AdeI	CACNNNGTG	1 cut(s)	970
AfiI	CCNNNNNNNGG	3 cut(s)	199, 314, 331
AgsI	TTSAA	6 cut(s)	241, 419, 526, 556, 711, 786
AjnI	CCWGG	1 cut(s)	307
AluBI	AGCT	5 cut(s)	24, 210, 489, 535, 705
AluI	AGCT	5 cut(s)	24, 210, 489, 535, 705
Alw26I	GTCTC	1 cut(s)	208
Ama87I	CYCGRG	1 cut(s)	367
AoxI	GGCC	4 cut(s)	194, 322, 376, 626
ApaI	GGGCCC	1 cut(s)	380
ApeKI	GCWGC	2 cut(s)	24, 264
ApoI	RAATTY	7 cut(s)	8, 242, 287, 419, 526, 712, 781
Asp700I	GAANNNNTTC	1 cut(s)	236
AspS9I	GGNCC	3 cut(s)	357, 376, 377
AsuC2I	CCSGG	1 cut(s)	193
AsuHPI	GGTGA	4 cut(s)	283, 407, 629, 845
AsuII	TTCGAA	2 cut(s)	584, 716
AvaI	CYCGRG	1 cut(s)	367
AvaII	GGWCC	1 cut(s)	357
BaeGI	GKGCMC	1 cut(s)	380
BanII	GRGCYC	2 cut(s)	162, 380
BarI	GAAGNNNNNNTAC	4 cut(s)	502, 534, 691, 723
BbsI	GAAGAC	2 cut(s)	45, 209
BbvI	GCAGC	2 cut(s)	11, 276
BccI	CCATC	1 cut(s)	205
BceAI	ACGGC	2 cut(s)	337, 660
BcgI	CGANNNNNNTGC	2 cut(s)	440, 474
BciT130I	CCWGG	1 cut(s)	309
BcnI	CCSGG	1 cut(s)	193
BcoDI	GTCTC	1 cut(s)	208
BfaI	CTAG	1 cut(s)	579
BisI	GCNGC	3 cut(s)	25, 265, 857
BlsI	GCNGC	3 cut(s)	26, 266, 858
Bme1390I	CCNGG	2 cut(s)	193, 309
Bme18I	GGWCC	1 cut(s)	357
BmeT110I	CYCGRG	1 cut(s)	367
BmgT120I	GGNCC	3 cut(s)	357, 376, 377
BmiI	GGNNCC	3 cut(s)	175, 358, 378
BmrFI	CCNGG	2 cut(s)	193, 309
BmsI	GCATC	2 cut(s)	241, 1033
BpiI	GAAGAC	2 cut(s)	45, 209
Bpu14I	TTCGAA	2 cut(s)	584, 716
BpuEI	CTTGAG	1 cut(s)	190
BpuMI	CCSGG	1 cut(s)	193
Bsa29I	ATCGAT	1 cut(s)	403
BsaBI	GATNNNNATC	1 cut(s)	255
BsaHI	GRCGYC	3 cut(s)	153, 272, 305
BsaI	GGTCTC	1 cut(s)	208
BsaJI	CCNNGG	3 cut(s)	282, 623, 809
BsaWI	WCCGGW	1 cut(s)	212
BsaXI	ACNNNNNCTCC	4 cut(s)	158, 188, 903, 933
Bsc4I	CCNNNNNNNGG	3 cut(s)	199, 314, 331
Bse1I	ACTGG	3 cut(s)	336, 800, 907
Bse8I	GATNNNNATC	1 cut(s)	255
BseBI	CCWGG	1 cut(s)	309
BseCI	ATCGAT	1 cut(s)	403
BseDI	CCNNGG	3 cut(s)	282, 623, 809
BseGI	GGATG	4 cut(s)	691, 829, 894, 1048
BseJI	GATNNNNATC	1 cut(s)	255
BseLI	CCNNNNNNNGG	3 cut(s)	199, 314, 331
BseMII	CTCAG	2 cut(s)	274, 972
BseNI	ACTGG	3 cut(s)	336, 800, 907
BseSI	GKGCMC	1 cut(s)	380
BseXI	GCAGC	2 cut(s)	11, 276
BseYI	CCCAGC	1 cut(s)	884
BshFI	GGCC	4 cut(s)	196, 324, 378, 628
BshVI	ATCGAT	1 cut(s)	403
BsiHKCI	CYCGRG	1 cut(s)	367
BsiSI	CCGG	2 cut(s)	193, 213
BslI	CCNNNNNNNGG	3 cut(s)	199, 314, 331
BsmAI	GTCTC	1 cut(s)	208
BsmI	GAATGC	1 cut(s)	790
BsnI	GGCC	4 cut(s)	196, 324, 378, 628
Bso31I	GGTCTC	1 cut(s)	208
BsoBI	CYCGRG	1 cut(s)	367
Bsp119I	TTCGAA	2 cut(s)	584, 716
Bsp120I	GGGCCC	1 cut(s)	376
Bsp1286I	GDGCHC	2 cut(s)	162, 380
Bsp143I	GATC	1 cut(s)	1020
BspACI	CCGC	1 cut(s)	856
BspANI	GGCC	4 cut(s)	196, 324, 378, 628
BspCNI	CTCAG	2 cut(s)	273, 973
BspDI	ATCGAT	1 cut(s)	403
BspLI	GGNNCC	3 cut(s)	175, 358, 378
BspQI	GCTCTTC	1 cut(s)	712
BspT104I	TTCGAA	2 cut(s)	584, 716
BspTNI	GGTCTC	1 cut(s)	208
BsrI	ACTGG	3 cut(s)	336, 800, 907
BssECI	CCNNGG	3 cut(s)	282, 623, 809
BssMI	GATC	1 cut(s)	1020
BssNI	GRCGYC	3 cut(s)	153, 272, 305
BssT1I	CCWWGG	2 cut(s)	623, 809
Bst2UI	CCWGG	1 cut(s)	309
Bst4CI	ACNGT	5 cut(s)	395, 505, 542, 877, 970
Bst6I	CTCTTC	4 cut(s)	94, 149, 712, 801
BstACI	GRCGYC	3 cut(s)	153, 272, 305
BstBI	TTCGAA	2 cut(s)	584, 716
BstC8I	GCNNGC	1 cut(s)	172
BstDEI	CTNAG	4 cut(s)	260, 605, 767, 981
BstDSI	CCRYGG	1 cut(s)	282
BstF5I	GGATG	4 cut(s)	691, 829, 894, 1048
BstKTI	GATC	1 cut(s)	1023
BstMAI	GTCTC	1 cut(s)	208
BstMBI	GATC	1 cut(s)	1020
BstMWI	GCNNNNNNNGC	3 cut(s)	835, 856, 920
BstNI	CCWGG	1 cut(s)	309
BstSCI	CCNGG	2 cut(s)	191, 307
BstSLI	GKGCMC	1 cut(s)	380
BstV1I	GCAGC	2 cut(s)	11, 276
BstV2I	GAAGAC	2 cut(s)	45, 209
Bsu15I	ATCGAT	1 cut(s)	403
BsuRI	GGCC	4 cut(s)	196, 324, 378, 628
BsuTUI	ATCGAT	1 cut(s)	403
BtgI	CCRYGG	1 cut(s)	282
BtsCI	GGATG	4 cut(s)	691, 829, 894, 1048
BtsI	GCAGTG	2 cut(s)	319, 748
BtsIMutI	CAGTG	6 cut(s)	319, 426, 501, 547, 748, 807
Cac8I	GCNNGC	1 cut(s)	172
Cfr13I	GGNCC	3 cut(s)	357, 376, 377
ClaI	ATCGAT	1 cut(s)	403
CseI	GACGC	3 cut(s)	161, 176, 313
CviAII	CATG	2 cut(s)	753, 830
DdeI	CTNAG	4 cut(s)	260, 605, 767, 981
DpnI	GATC	1 cut(s)	1022
DpnII	GATC	1 cut(s)	1020
DraI	TTTAAA	1 cut(s)	456
DraIII	CACNNNGTG	1 cut(s)	970
EaeI	YGGCCR	1 cut(s)	194
Eam1104I	CTCTTC	4 cut(s)	94, 149, 712, 801
EarI	CTCTTC	4 cut(s)	94, 149, 712, 801
Eco130I	CCWWGG	2 cut(s)	623, 809
Eco147I	AGGCCT	1 cut(s)	628
Eco24I	GRGCYC	2 cut(s)	162, 380
Eco31I	GGTCTC	1 cut(s)	208
Eco47I	GGWCC	1 cut(s)	357
Eco88I	CYCGRG	1 cut(s)	367
EcoO109I	RGGNCCY	1 cut(s)	376
EcoRI	GAATTC	1 cut(s)	287
EcoRII	CCWGG	1 cut(s)	307
EcoT14I	CCWWGG	2 cut(s)	623, 809
EcoT22I	ATGCAT	1 cut(s)	792
EcoT38I	GRGCYC	2 cut(s)	162, 380
ErhI	CCWWGG	2 cut(s)	623, 809
FaeI	CATG	2 cut(s)	756, 833
FatI	CATG	2 cut(s)	752, 829
FblI	GTMKAC	1 cut(s)	165
Fnu4HI	GCNGC	3 cut(s)	25, 265, 857
FokI	GGATG	4 cut(s)	698, 836, 901, 1055
FriOI	GRGCYC	2 cut(s)	162, 380
Fsp4HI	GCNGC	3 cut(s)	25, 265, 857
FspBI	CTAG	1 cut(s)	579
GluI	GCNGC	3 cut(s)	25, 265, 857
GsaI	CCCAGC	1 cut(s)	888
HaeIII	GGCC	4 cut(s)	196, 324, 378, 628
HapII	CCGG	2 cut(s)	193, 213
HgaI	GACGC	3 cut(s)	161, 176, 313
Hin1I	GRCGYC	3 cut(s)	153, 272, 305
Hin1II	CATG	2 cut(s)	756, 833
HincII	GTYRAC	1 cut(s)	184
HindII	GTYRAC	1 cut(s)	184
HinfI	GANTC	3 cut(s)	128, 400, 805
HpaII	CCGG	2 cut(s)	193, 213
HphI	GGTGA	4 cut(s)	283, 407, 629, 845
Hpy166II	GTNNAC	5 cut(s)	166, 184, 360, 448, 620
Hpy188I	TCNGA	2 cut(s)	133, 639
Hpy188III	TCNNGA	5 cut(s)	67, 248, 298, 898, 1057
Hpy8I	GTNNAC	5 cut(s)	166, 184, 360, 448, 620
Hpy99I	CGWCG	5 cut(s)	155, 274, 277, 323, 733
HpyAV	CCTTC	3 cut(s)	247, 304, 1033
HpyCH4III	ACNGT	5 cut(s)	395, 505, 542, 877, 970
HpyCH4IV	ACGT	1 cut(s)	272
HpyCH4V	TGCA	3 cut(s)	27, 790, 850
HpyF10VI	GCNNNNNNNGC	3 cut(s)	835, 856, 920
HpyF3I	CTNAG	4 cut(s)	260, 605, 767, 981
HpySE526I	ACGT	1 cut(s)	272
Hsp92I	GRCGYC	3 cut(s)	153, 272, 305
Hsp92II	CATG	2 cut(s)	756, 833
Kzo9I	GATC	1 cut(s)	1020
LguI	GCTCTTC	1 cut(s)	712
LmnI	GCTCC	3 cut(s)	179, 215, 911
Lsp1109I	GCAGC	2 cut(s)	11, 276
LweI	GCATC	2 cut(s)	241, 1033
MaeI	CTAG	1 cut(s)	579
MaeII	ACGT	1 cut(s)	272
MaeIII	GTNAC	1 cut(s)	898
MalI	GATC	1 cut(s)	1022
MboI	GATC	1 cut(s)	1020
MboII	GAAGA	8 cut(s)	45, 81, 136, 209, 510, 699, 788, 1030
MhlI	GDGCHC	2 cut(s)	162, 380
MnlI	CCTC	3 cut(s)	56, 97, 676
Mph1103I	ATGCAT	1 cut(s)	792
MroXI	GAANNNNTTC	1 cut(s)	236
MseI	TTAA	3 cut(s)	390, 455, 537
MslI	CAYNNNNRTG	2 cut(s)	431, 843
MspA1I	CMGCKG	1 cut(s)	24
MspI	CCGG	2 cut(s)	193, 213
MspR9I	CCNGG	2 cut(s)	193, 309
Mva1269I	GAATGC	1 cut(s)	790
MvaI	CCWGG	1 cut(s)	309
MwoI	GCNNNNNNNGC	3 cut(s)	835, 856, 920
NciI	CCSGG	1 cut(s)	193
NdeII	GATC	1 cut(s)	1020
NlaIII	CATG	2 cut(s)	756, 833
NlaIV	GGNNCC	3 cut(s)	175, 358, 378
NmeAIII	GCCGAG	1 cut(s)	181
NmuCI	GTSAC	1 cut(s)	898
NsiI	ATGCAT	1 cut(s)	792
NspV	TTCGAA	2 cut(s)	584, 716
PceI	AGGCCT	1 cut(s)	628
PciSI	GCTCTTC	1 cut(s)	712
PcsI	WCGNNNNNNNCGW	2 cut(s)	153, 159
PctI	GAATGC	1 cut(s)	790
PdmI	GAANNNNTTC	1 cut(s)	236
PfeI	GAWTC	3 cut(s)	128, 400, 805
PkrI	GCNGC	3 cut(s)	26, 266, 858
Psp6I	CCWGG	1 cut(s)	307
PspFI	CCCAGC	1 cut(s)	884
PspGI	CCWGG	1 cut(s)	307
PspN4I	GGNNCC	3 cut(s)	175, 358, 378
PspOMI	GGGCCC	1 cut(s)	376
PspPI	GGNCC	3 cut(s)	357, 376, 377
PvuII	CAGCTG	1 cut(s)	24
RseI	CAYNNNNRTG	2 cut(s)	431, 843
SapI	GCTCTTC	1 cut(s)	712
SaqAI	TTAA	3 cut(s)	390, 455, 537
SatI	GCNGC	3 cut(s)	25, 265, 857
Sau3AI	GATC	1 cut(s)	1020
Sau96I	GGNCC	3 cut(s)	357, 376, 377
ScrFI	CCNGG	2 cut(s)	193, 309
SduI	GDGCHC	2 cut(s)	162, 380
SetI	ASST	9 cut(s)	26, 212, 275, 296, 491, 537, 700, 707, 1013
SfaNI	GCATC	2 cut(s)	241, 1033
SfuI	TTCGAA	2 cut(s)	584, 716
SinI	GGWCC	1 cut(s)	357
SmiI	ATTTAAAT	1 cut(s)	456
SmiMI	CAYNNNNRTG	2 cut(s)	431, 843
SmlI	CTYRAG	1 cut(s)	205
SmoI	CTYRAG	1 cut(s)	205
SseBI	AGGCCT	1 cut(s)	628
SsiI	CCGC	1 cut(s)	856
SspMI	CTAG	1 cut(s)	579
StuI	AGGCCT	1 cut(s)	628
StyD4I	CCNGG	2 cut(s)	191, 307
StyI	CCWWGG	2 cut(s)	623, 809
SwaI	ATTTAAAT	1 cut(s)	456
TaaI	ACNGT	5 cut(s)	395, 505, 542, 877, 970
TaiI	ACGT	1 cut(s)	275
TaqI	TCGA	6 cut(s)	249, 299, 403, 477, 584, 716
TaqII	GACCGA	1 cut(s)	190
TauI	GCSGC	1 cut(s)	859
TfiI	GAWTC	3 cut(s)	128, 400, 805
Tru1I	TTAA	3 cut(s)	390, 455, 537
Tru9I	TTAA	3 cut(s)	390, 455, 537
TscAI	CASTG	6 cut(s)	319, 433, 508, 547, 748, 807
TseFI	GTSAC	1 cut(s)	898
TseI	GCWGC	2 cut(s)	24, 264
Tsp45I	GTSAC	1 cut(s)	898
TspDTI	ATGAA	4 cut(s)	81, 449, 510, 741
TspGWI	ACGGA	2 cut(s)	299, 666
TspRI	CASTG	6 cut(s)	319, 433, 508, 547, 748, 807
VpaK11BI	GGWCC	1 cut(s)	357
XapI	RAATTY	7 cut(s)	8, 242, 287, 419, 526, 712, 781
XmiI	GTMKAC	1 cut(s)	165
XmnI	GAANNNNTTC	1 cut(s)	236
XspI	CTAG	1 cut(s)	579
ZraI	GACGTC	1 cut(s)	273
Zsp2I	ATGCAT	1 cut(s)	792

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.