Prupe.3G214900_v2.0.a1

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
21806983 .. 21811452
4470 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G214900.1

Sequence Viewer

Length: 1548 bp
ATGGGTACCAAATTTGGAGCCAGTTTGGTTACTCCGTTTCTCTTTCTGCTTCTGTCTCATGTGGTGTTTTCCACAACCAATGATGGGTTGGTCAGAATTGGACTGAAAAAGATGAAAATAGATCAAAAATGTCACATGAATAGAAGAAGTAATGCTAATGAGCAAGAAGAAACACCGGGAGGTCCTATTAGGAAGTATCATCTGCGTGGTAATCTTGGGGATTCTGAGGACACTGATATTGTTGCACTAAAGAACTATATGGATGCTCAGTATTTTGGTGAGATTGGCATTGGAAGTCCTGCTCAGAAGTTCACTGTGATATTTGACACTGGAAGTTCTAATCTTTGGGTGCCCTCAGCCAAGTGTTATTTCTCGGTTGCTTGCTTTTTTCACTCCAAGTATAAGTCTAGCCAATCAAGTACATACACAAAGAACGGAAAATCTGCGGCAATCCAGTATGGGACCGGCGCAATTGCAGGTTTCTTCAGCCAGGACCATGTCACTGTTGGCAATCTTGTTGTTAAGGATCAGGACTTTATTGAGGCAACCAAAGAGCCTGGCATCACATTCGTCGCAGCTAAGTTTGATGGTATTCTTGGACTTGGATTTCAAGAGATCTCAGTTGGAAATGCTGTTCCTGTCTGGTATAATTTGGTCAATCAAGGTCTTGTTACAGAACCAGTTTTCTCATTTTGGTTAAATCGCAATACTGAAGGGGAAGAAGGGGGTGAGATTGTATTTGGTGGGGTTGATTCTAATCATTACAAGGGTGAGCATACATATGTTCCTGTGACTCAGAAAGGCTATTGGCAGTTTGATATGGGTGATGTCTTAATTGGTGGCGAAACATCTGGATTCTGTGCTAGTGGCTGTTCAGCAATTGCCGATTCAGGAACCTCCCTATTGGCTGGGCCAACAACTGTTATCACTCAAATCAATCATGCCATTGGAGCCTCTGGTGTTGTAAGCCAAGAATGTAAGACAGTGGTTGAACAATATGGGAAAACTATAATGGAAATGTTGCTAGCTCAGGCACAACCCAAAAAAATTTGCTCCCAAATTGGTTTCTGTACTTTTGATGGAACTCATGGTGTGAGTATGGGCATTGAAAGTATGGTGAATGAGAAACTAGAAATGACATCTGACGGCGTGCATGATGCTGCATGTACTGCTTGTGAGATGGCAGTGGTATGGATGCAAAATCGGCTAAGGCTAAATGAGACAGAAGATCAGATCTTGAATTATGTCAATGAGCTCTGTGAACGACTTCCCAGTCCCAGTGGAGAATCAGTAGTTCAGTGTGACGCTCTATCCTCCTTACCCAGCGTATCATTTACCATTGGTGGTAAAGTATTTGACCTTGCTCCAGAGCAGTACGTTCTCAAAGTCGGGGAGGGAGTTGCAGCTCAATGCATCAGTGGGTTTATCGCTTTAGATGTCGCTCCTCCTCGAGGACCACTCTGGATTTTGGGGGATATTTTCATGGGTCGGTATCACACCGTGTTCGACTATGGGAACTCAACAGTTGGATTTGCAGAAGCAGCTTAG

Protein Analysis

516

Amino Acids

55.61

Weight (kDa)

5.05

Isoelectric Point (pI)

38.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1272
AbsI CCTCGAGG 1 cut(s) 1449
Acc36I ACCTGC 1 cut(s) 467
Acc65I GGTACC 1 cut(s) 5
AccB1I GGYRCC 2 cut(s) 5, 349
AciI CCGC 1 cut(s) 446
AclWI GGATC 1 cut(s) 534
AcsI RAATTY 2 cut(s) 11, 1047
AcuI CTGAAG 2 cut(s) 469, 732
AdeI CACNNNGTG 1 cut(s) 1501
AfaI GTAC 5 cut(s) 7, 421, 1072, 1168, 1376
AfiI CCNNNNNNNGG 2 cut(s) 84, 1451
AgsI TTSAA 4 cut(s) 611, 992, 1109, 1240
AjnI CCWGG 2 cut(s) 489, 556
AjuI GAANNNNNNNTTGG 2 cut(s) 353, 385
AloI GAACNNNNNNTCC 2 cut(s) 618, 650
AluBI AGCT 5 cut(s) 578, 1028, 1255, 1406, 1544
AluI AGCT 5 cut(s) 578, 1028, 1255, 1406, 1544
Alw21I GWGCWC 1 cut(s) 1257
Alw26I GTCTC 2 cut(s) 60, 1214
AlwI GGATC 1 cut(s) 534
Ama87I CYCGRG 1 cut(s) 1449
AoxI GGCC 1 cut(s) 911
ApeKI GCWGC 4 cut(s) 575, 1160, 1403, 1541
ApoI RAATTY 2 cut(s) 11, 1047
Asp700I GAANNNNTTC 1 cut(s) 1266
Asp718I GGTACC 1 cut(s) 5
AspLEI GCGC 1 cut(s) 470
AspS9I GGNCC 5 cut(s) 182, 462, 493, 911, 1454
AsuC2I CCSGG 1 cut(s) 177
AsuHPI GGTGA 5 cut(s) 290, 740, 782, 836, 1129
AsuNHI GCTAGC 1 cut(s) 1024
AvaI CYCGRG 1 cut(s) 1449
AvaII GGWCC 4 cut(s) 182, 462, 493, 1454
BaeGI GKGCMC 1 cut(s) 354
BanI GGYRCC 2 cut(s) 5, 349
BanII GRGCYC 1 cut(s) 1257
Bbv12I GWGCWC 1 cut(s) 1257
BbvCI CCTCAGC 1 cut(s) 355
BbvI GCAGC 3 cut(s) 587, 1147, 1415
BccI CCATC 4 cut(s) 77, 581, 1073, 1174
BceAI ACGGC 1 cut(s) 1162
BcgI CGANNNNNNTGC 2 cut(s) 550, 584
BciT130I CCWGG 2 cut(s) 491, 558
BcnI CCSGG 1 cut(s) 177
BcoDI GTCTC 2 cut(s) 60, 1214
BfaI CTAG 4 cut(s) 408, 864, 1025, 1130
BfuAI ACCTGC 1 cut(s) 467
BglII AGATCT 2 cut(s) 615, 1233
BisI GCNGC 5 cut(s) 447, 576, 1161, 1404, 1542
BlsI GCNGC 5 cut(s) 448, 577, 1162, 1405, 1543
Bme1390I CCNGG 3 cut(s) 177, 491, 558
Bme18I GGWCC 4 cut(s) 182, 462, 493, 1454
BmeT110I CYCGRG 1 cut(s) 1449
BmgT120I GGNCC 5 cut(s) 182, 462, 493, 911, 1454
BmiI GGNNCC 6 cut(s) 7, 19, 351, 463, 895, 952
BmrFI CCNGG 3 cut(s) 177, 491, 558
BmrI ACTGGG 2 cut(s) 1266, 1272
BmsI GCATC 5 cut(s) 253, 570, 1147, 1185, 1422
BmtI GCTAGC 1 cut(s) 1028
BmuI ACTGGG 2 cut(s) 1266, 1272
BplI GAGNNNNNCTC 2 cut(s) 1443, 1475
BpmI CTGGAG 1 cut(s) 1350
Bpu10I CCTNAGC 3 cut(s) 355, 1029, 1208
BpuMI CCSGG 1 cut(s) 177
BsaBI GATNNNNATC 1 cut(s) 756
BsaXI ACNNNNNCTCC 2 cut(s) 1275, 1305
Bsc4I CCNNNNNNNGG 2 cut(s) 84, 1451
Bse118I RCCGGY 1 cut(s) 464
Bse1I ACTGG 6 cut(s) 21, 334, 454, 680, 1272, 1278
Bse8I GATNNNNATC 1 cut(s) 756
BseBI CCWGG 2 cut(s) 491, 558
BseGI GGATG 2 cut(s) 268, 1200
BseJI GATNNNNATC 1 cut(s) 756
BseLI CCNNNNNNNGG 2 cut(s) 84, 1451
BseMII CTCAG 7 cut(s) 216, 281, 317, 369, 633, 809, 1043
BseNI ACTGG 6 cut(s) 21, 334, 454, 680, 1272, 1278
BseRI GAGGAG 2 cut(s) 1434, 1437
BseSI GKGCMC 1 cut(s) 354
BseXI GCAGC 3 cut(s) 587, 1147, 1415
BseYI CCCAGC 2 cut(s) 908, 1322
BshFI GGCC 1 cut(s) 913
BshNI GGYRCC 2 cut(s) 5, 349
BsiHKAI GWGCWC 1 cut(s) 1257
BsiHKCI CYCGRG 1 cut(s) 1449
BsiSI CCGG 2 cut(s) 176, 465
BslFI GGGAC 2 cut(s) 475, 1260
BslI CCNNNNNNNGG 2 cut(s) 84, 1451
BsmAI GTCTC 2 cut(s) 60, 1214
BsmFI GGGAC 2 cut(s) 475, 1260
BsnI GGCC 1 cut(s) 913
BsoBI CYCGRG 1 cut(s) 1449
Bsp1286I GDGCHC 2 cut(s) 354, 1257
Bsp143I GATC 5 cut(s) 121, 526, 615, 1228, 1233
BspACI CCGC 1 cut(s) 446
BspANI GGCC 1 cut(s) 913
BspCNI CTCAG 7 cut(s) 217, 280, 316, 368, 632, 808, 1042
BspLI GGNNCC 6 cut(s) 7, 19, 351, 463, 895, 952
BspMI ACCTGC 1 cut(s) 467
BspOI GCTAGC 1 cut(s) 1028
BspPI GGATC 1 cut(s) 534
BspT107I GGYRCC 2 cut(s) 5, 349
BsrFI RCCGGY 1 cut(s) 464
BsrI ACTGG 6 cut(s) 21, 334, 454, 680, 1272, 1278
BssAI RCCGGY 1 cut(s) 464
BssMI GATC 5 cut(s) 121, 526, 615, 1228, 1233
Bst2UI CCWGG 2 cut(s) 491, 558
Bst4CI ACNGT 6 cut(s) 316, 505, 922, 985, 1501, 1525
BstAPI GCANNNNNTGC 1 cut(s) 1169
BstC8I GCNNGC 3 cut(s) 382, 1026, 1151
BstENI CCTNNNNNAGG 1 cut(s) 1449
BstF5I GGATG 2 cut(s) 268, 1200
BstHHI GCGC 1 cut(s) 470
BstKTI GATC 5 cut(s) 124, 529, 618, 1231, 1236
BstMAI GTCTC 2 cut(s) 60, 1214
BstMBI GATC 5 cut(s) 121, 526, 615, 1228, 1233
BstMWI GCNNNNNNNGC 4 cut(s) 950, 1169, 1204, 1541
BstNI CCWGG 2 cut(s) 491, 558
BstNSI RCATGY 1 cut(s) 1167
BstSCI CCNGG 3 cut(s) 175, 489, 556
BstSLI GKGCMC 1 cut(s) 354
BstV1I GCAGC 3 cut(s) 587, 1147, 1415
BstX2I RGATCY 2 cut(s) 615, 1233
BstYI RGATCY 2 cut(s) 615, 1233
BsuRI GGCC 1 cut(s) 913
BtsCI GGATG 2 cut(s) 268, 1200
BtsI GCAGTG 1 cut(s) 1191
BtsIMutI CAGTG 9 cut(s) 231, 312, 327, 501, 990, 1191, 1285, 1304, 1423
BveI ACCTGC 1 cut(s) 467
Cac8I GCNNGC 3 cut(s) 382, 1026, 1151
CfoI GCGC 1 cut(s) 470
Cfr10I RCCGGY 1 cut(s) 464
Cfr13I GGNCC 5 cut(s) 182, 462, 493, 911, 1454
CseI GACGC 1 cut(s) 1313
Csp6I GTAC 5 cut(s) 6, 420, 1071, 1167, 1375
CviAII CATG 8 cut(s) 59, 136, 497, 941, 1088, 1154, 1164, 1483
CviQI GTAC 5 cut(s) 6, 420, 1071, 1167, 1375
DpnI GATC 5 cut(s) 123, 528, 617, 1230, 1235
DpnII GATC 5 cut(s) 121, 526, 615, 1228, 1233
DraIII CACNNNGTG 1 cut(s) 1501
DrdI GACNNNNNNGTC 1 cut(s) 1272
DseDI GACNNNNNNGTC 1 cut(s) 1272
Ecl136II GAGCTC 1 cut(s) 1255
Eco24I GRGCYC 1 cut(s) 1257
Eco47I GGWCC 4 cut(s) 182, 462, 493, 1454
Eco53kI GAGCTC 1 cut(s) 1255
Eco57I CTGAAG 2 cut(s) 469, 732
Eco88I CYCGRG 1 cut(s) 1449
EcoICRI GAGCTC 1 cut(s) 1255
EcoNI CCTNNNNNAGG 1 cut(s) 1449
EcoO109I RGGNCCY 1 cut(s) 182
EcoRII CCWGG 2 cut(s) 489, 556
EcoT22I ATGCAT 1 cut(s) 1415
EcoT38I GRGCYC 1 cut(s) 1257
FaeI CATG 8 cut(s) 62, 139, 500, 944, 1091, 1157, 1167, 1486
FaqI GGGAC 2 cut(s) 475, 1260
FatI CATG 8 cut(s) 58, 135, 496, 940, 1087, 1153, 1163, 1482
FauNDI CATATG 1 cut(s) 781
Fnu4HI GCNGC 5 cut(s) 447, 576, 1161, 1404, 1542
FokI GGATG 2 cut(s) 275, 1207
FriOI GRGCYC 1 cut(s) 1257
Fsp4HI GCNGC 5 cut(s) 447, 576, 1161, 1404, 1542
FspBI CTAG 4 cut(s) 408, 864, 1025, 1130
GlaI GCGC 1 cut(s) 469
GluI GCNGC 5 cut(s) 447, 576, 1161, 1404, 1542
GsaI CCCAGC 2 cut(s) 912, 1326
GsuI CTGGAG 1 cut(s) 1350
HaeIII GGCC 1 cut(s) 913
HapII CCGG 2 cut(s) 176, 465
HgaI GACGC 1 cut(s) 1313
HhaI GCGC 1 cut(s) 470
Hin1II CATG 8 cut(s) 62, 139, 500, 944, 1091, 1157, 1167, 1486
Hin6I GCGC 1 cut(s) 468
HinP1I GCGC 1 cut(s) 468
HinfI GANTC 6 cut(s) 221, 752, 793, 855, 887, 1286
HpaII CCGG 2 cut(s) 176, 465
HphI GGTGA 5 cut(s) 290, 740, 782, 836, 1129
Hpy166II GTNNAC 2 cut(s) 312, 1262
Hpy188I TCNGA 6 cut(s) 95, 226, 306, 798, 1144, 1233
Hpy188III TCNNGA 7 cut(s) 530, 611, 852, 891, 1237, 1367, 1462
Hpy8I GTNNAC 2 cut(s) 312, 1262
Hpy99I CGWCG 1 cut(s) 575
HpyAV CCTTC 2 cut(s) 707, 716
HpyCH4III ACNGT 6 cut(s) 316, 505, 922, 985, 1501, 1525
HpyCH4IV ACGT 1 cut(s) 1377
HpyCH4V TGCA 8 cut(s) 245, 476, 1153, 1163, 1198, 1403, 1413, 1535
HpyF10VI GCNNNNNNNGC 4 cut(s) 950, 1169, 1204, 1541
HpySE526I ACGT 1 cut(s) 1377
Hsp92II CATG 8 cut(s) 62, 139, 500, 944, 1091, 1157, 1167, 1486
HspAI GCGC 1 cut(s) 468
KpnI GGTACC 1 cut(s) 9
Kzo9I GATC 5 cut(s) 121, 526, 615, 1228, 1233
LmnI GCTCC 5 cut(s) 17, 950, 1058, 1369, 1447
Lsp1109I GCAGC 3 cut(s) 587, 1147, 1415
LweI GCATC 5 cut(s) 253, 570, 1147, 1185, 1422
MaeI CTAG 4 cut(s) 408, 864, 1025, 1130
MaeII ACGT 1 cut(s) 1377
MaeIII GTNAC 6 cut(s) 28, 131, 499, 670, 790, 1301
MalI GATC 5 cut(s) 123, 528, 617, 1230, 1235
MboI GATC 5 cut(s) 121, 526, 615, 1228, 1233
MboII GAAGA 5 cut(s) 156, 179, 475, 731, 1238
MfeI CAATTG 2 cut(s) 471, 879
MflI RGATCY 2 cut(s) 615, 1233
MhlI GDGCHC 2 cut(s) 354, 1257
MluCI AATT 9 cut(s) 11, 96, 471, 649, 834, 879, 1047, 1059, 1240
MlyI GAGTC 1 cut(s) 787
MmeI TCCRAC 2 cut(s) 604, 1507
Mph1103I ATGCAT 1 cut(s) 1415
MroXI GAANNNNTTC 1 cut(s) 1266
MseI TTAA 3 cut(s) 522, 698, 833
MslI CAYNNNNRTG 2 cut(s) 204, 780
MspI CCGG 2 cut(s) 176, 465
MspR9I CCNGG 3 cut(s) 177, 491, 558
MunI CAATTG 2 cut(s) 471, 879
MvaI CCWGG 2 cut(s) 491, 558
MwoI GCNNNNNNNGC 4 cut(s) 950, 1169, 1204, 1541
NciI CCSGG 1 cut(s) 177
NdeI CATATG 1 cut(s) 781
NdeII GATC 5 cut(s) 121, 526, 615, 1228, 1233
NheI GCTAGC 1 cut(s) 1024
NlaIII CATG 8 cut(s) 62, 139, 500, 944, 1091, 1157, 1167, 1486
NlaIV GGNNCC 6 cut(s) 7, 19, 351, 463, 895, 952
NmuCI GTSAC 4 cut(s) 131, 499, 790, 1301
NsiI ATGCAT 1 cut(s) 1415
NspI RCATGY 1 cut(s) 1167
PaeR7I CTCGAG 1 cut(s) 1449
PdmI GAANNNNTTC 1 cut(s) 1266
PfeI GAWTC 5 cut(s) 221, 752, 855, 887, 1286
PflFI GACNNNGTC 1 cut(s) 497
PkrI GCNGC 5 cut(s) 448, 577, 1162, 1405, 1543
PleI GAGTC 1 cut(s) 787
PpsI GAGTC 1 cut(s) 787
PpuMI RGGWCCY 1 cut(s) 182
Psp124BI GAGCTC 1 cut(s) 1257
Psp5II RGGWCCY 1 cut(s) 182
Psp6I CCWGG 2 cut(s) 489, 556
PspFI CCCAGC 2 cut(s) 908, 1322
PspGI CCWGG 2 cut(s) 489, 556
PspN4I GGNNCC 6 cut(s) 7, 19, 351, 463, 895, 952
PspPI GGNCC 5 cut(s) 182, 462, 493, 911, 1454
PspPPI RGGWCCY 1 cut(s) 182
PspXI VCTCGAGB 1 cut(s) 1449
PsuI RGATCY 2 cut(s) 615, 1233
PsyI GACNNNGTC 1 cut(s) 497
RsaI GTAC 5 cut(s) 7, 421, 1072, 1168, 1376
RsaNI GTAC 5 cut(s) 6, 420, 1071, 1167, 1375
RseI CAYNNNNRTG 2 cut(s) 204, 780
SacI GAGCTC 1 cut(s) 1257
SaqAI TTAA 3 cut(s) 522, 698, 833
SatI GCNGC 5 cut(s) 447, 576, 1161, 1404, 1542
Sau3AI GATC 5 cut(s) 121, 526, 615, 1228, 1233
Sau96I GGNCC 5 cut(s) 182, 462, 493, 911, 1454
SchI GAGTC 1 cut(s) 787
ScrFI CCNGG 3 cut(s) 177, 491, 558
SduI GDGCHC 2 cut(s) 354, 1257
SfaNI GCATC 5 cut(s) 253, 570, 1147, 1185, 1422
Sfr274I CTCGAG 1 cut(s) 1449
SinI GGWCC 4 cut(s) 182, 462, 493, 1454
SlaI CTCGAG 1 cut(s) 1449
SmiMI CAYNNNNRTG 2 cut(s) 204, 780
SmlI CTYRAG 1 cut(s) 1449
SmoI CTYRAG 1 cut(s) 1449
Sse9I AATT 9 cut(s) 11, 96, 471, 649, 834, 879, 1047, 1059, 1240
SsiI CCGC 1 cut(s) 446
SspMI CTAG 4 cut(s) 408, 864, 1025, 1130
SstI GAGCTC 1 cut(s) 1257
StyD4I CCNGG 3 cut(s) 175, 489, 556
TaaI ACNGT 6 cut(s) 316, 505, 922, 985, 1501, 1525
TaiI ACGT 1 cut(s) 1380
TaqI TCGA 2 cut(s) 1450, 1506
TasI AATT 9 cut(s) 11, 96, 471, 649, 834, 879, 1047, 1059, 1240
TatI WGTACW 3 cut(s) 419, 1070, 1166
TauI GCSGC 1 cut(s) 449
TfiI GAWTC 5 cut(s) 221, 752, 855, 887, 1286
Tru1I TTAA 3 cut(s) 522, 698, 833
Tru9I TTAA 3 cut(s) 522, 698, 833
TscAI CASTG 9 cut(s) 238, 319, 334, 508, 990, 1191, 1285, 1304, 1423
TseFI GTSAC 4 cut(s) 131, 499, 790, 1301
TseI GCWGC 4 cut(s) 575, 1160, 1403, 1541
Tsp45I GTSAC 4 cut(s) 131, 499, 790, 1301
TspDTI ATGAA 3 cut(s) 128, 152, 1471
TspGWI ACGGA 2 cut(s) 24, 450
TspRI CASTG 9 cut(s) 238, 319, 334, 508, 990, 1191, 1285, 1304, 1423
Tth111I GACNNNGTC 1 cut(s) 497
VpaK11BI GGWCC 4 cut(s) 182, 462, 493, 1454
XagI CCTNNNNNAGG 1 cut(s) 1449
XapI RAATTY 2 cut(s) 11, 1047
XceI RCATGY 1 cut(s) 1167
XcmI CCANNNNNNNNNTGG 2 cut(s) 85, 503
XhoI CTCGAG 1 cut(s) 1449
XmnI GAANNNNTTC 1 cut(s) 1266
XspI CTAG 4 cut(s) 408, 864, 1025, 1130
Zsp2I ATGCAT 1 cut(s) 1415
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.