Rh2CG521800

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
69620355 .. 69625428
5074 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG521800.1

Sequence Viewer

Length: 1425 bp
ATGGGTACCAAAATTAGGGCTTGTTTGGTGACTGTATTTCAGTTTCTGCTTCTGTCCCATGTGGTGCTCTCCACACCCAATGATGGGTTGGTTAGAATTGGACTTAAAAAGGTGAAATTGGATCAGACATCTCAGCTTCACAGGGAGACTAATGCTAAGAATGCACAAGGAAGTATGAGAGATCCTTTGAAGGAGTATCGTCTCCGCGGTGGGGATTCTTCTGGGGACACTGATATTGTTGAACTGAAGAACTATATGGATGCTCAGTATTTTGGGGAGATTGGTATTGGCACACCTGCTCAGAAGTTTACTGTGATATTTGATACTGGAAGTTCTAACCTTTGGGTGCCCTCGGCAAAGTGTTACTTCTCGGTGGCTTGCTTTTTTCACGCCAAGTATAAGTCTAGTCAGTCAAGTTCACACACAAAGAATGGGACATCTGCGGCTATCCAGTACGGAACTGGCGCAATTGCAGGTTTTTTTAGCCAGGACCATGTCACAGTTGGGAATCTTGTTGTTAAGGATCAAGATTTTATTGAGGCAACCAAGGAGCCTGGGATCACATTTGTGGCAGCTAAGTTTGATGGTATACTTGGACTTGGATTTCAAGAGATCTCAGTTGGAGGTGCTGTTCCTGTCTGGTATAATTTGGTCAATCAAGGTCTTGTCAAAGAACCAGTATTTTCATTTTGGTTAAATCGCAACACTGAAGGGGAAGAAGGGGGTGAGATTGTATTTGGTGGGATGGATTCTAACCATTACGTGGGTGAGCATACATATGTTCCAGTGACTCAAAAAGGCTATTGGCAGTTTGATATGGGGGATGTGCTAATTGGTGGTGAAACATCTGGACTTTGTGCTAGTGGTTGTTCAGCAATTGCTGATTCAGGAACTTCCCTATTGGCAGGGCCAACGACCATTATCACTCAAATAAATCATGCAATTGGAGCATCTGGTATTGTAAGCCAAGAGTGTAAGGCAGTTGTTGACCAGTATGGGAAAATTATACTGGAATTGTTGCTGGCTCAGGTTAAACCCCAAAGAATCTGCTCTCAAATTGGTGTATGTACTTTTGACGGGACTCGTGGTGTGAGTATGGGCATTGAAACTGTGGTGGATGAGAATATGGAAACTACATCTGATGGCGTGCATGATGCTGCATGTACTGCTTGTGAGATGGCAGTAGTATGGATACAGAATCAGCTAAAGCTAAATCTTAATCAGACAGAGGAGCAGATCTTGAACTATGCAAATGAGCTCTGTGAACGACTGCCCAGTCCAAGTGGTGAATCAGCTGTTCAATGTAATGCTCTCTCCTCCTTGCCCAGTATATCATTTACCATCGGTGGTAAAGTATTTGACCTTGCTCCAGAGCAGGTATGGTGTCATGACATTAACCATAAATCGTTTAACGTTTCATTTTGA

Protein Analysis

474

Amino Acids

51.17

Weight (kDa)

5.12

Isoelectric Point (pI)

34.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asp PF00026 89 - 466 1e-97 Eukaryotic aspartyl protease
TAXi_N PF14543 90 - 248 5e-11 Xylanase inhibitor N-terminal
SapB_2 PF03489 323 - 356 4.6e-12 Saposin-like type B, region 2
SapB_1 PF05184 387 - 425 8.1e-10 Saposin-like type B, region 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 304
AasI GACNNNNNNGTC 1 cut(s) 1275
Acc36I ACCTGC 3 cut(s) 304, 464, 1366
Acc65I GGTACC 1 cut(s) 5
AccB1I GGYRCC 2 cut(s) 5, 346
AccB7I CCANNNNNTGG 1 cut(s) 763
AccI GTMKAC 1 cut(s) 589
AccII CGCG 1 cut(s) 207
AciI CCGC 3 cut(s) 205, 207, 443
AclI AACGTT 1 cut(s) 1413
AclWI GGATC 4 cut(s) 129, 176, 531, 566
AcuI CTGAAG 2 cut(s) 266, 729
AfaI GTAC 4 cut(s) 7, 455, 1069, 1165
AfiI CCNNNNNNNGG 5 cut(s) 15, 83, 84, 211, 763
AgsI TTSAA 6 cut(s) 190, 242, 608, 1106, 1243, 1301
AjnI CCWGG 2 cut(s) 486, 553
AleI CACNNNNGTG 1 cut(s) 566
AloI GAACNNNNNNTCC 2 cut(s) 615, 647
AluBI AGCT 6 cut(s) 136, 575, 1204, 1210, 1258, 1295
AluI AGCT 6 cut(s) 136, 575, 1204, 1210, 1258, 1295
Alw21I GWGCWC 2 cut(s) 69, 1260
Alw26I GTCTC 2 cut(s) 140, 206
AlwI GGATC 4 cut(s) 129, 176, 531, 566
AlwNI CAGNNNCTG 1 cut(s) 46
AoxI GGCC 1 cut(s) 908
ApeKI GCWGC 2 cut(s) 572, 1157
Asp718I GGTACC 1 cut(s) 5
AspLEI GCGC 1 cut(s) 467
AspS9I GGNCC 2 cut(s) 490, 908
AsuHPI GGTGA 6 cut(s) 40, 124, 737, 779, 851, 1298
AvaII GGWCC 1 cut(s) 490
BaeGI GKGCMC 1 cut(s) 351
BanI GGYRCC 2 cut(s) 5, 346
BanII GRGCYC 1 cut(s) 1260
BauI CACGAG 1 cut(s) 1083
Bbv12I GWGCWC 2 cut(s) 69, 1260
BbvI GCAGC 2 cut(s) 584, 1144
BccI CCATC 6 cut(s) 77, 578, 739, 1136, 1171, 1349
BciT130I CCWGG 2 cut(s) 488, 555
BciVI GTATCC 1 cut(s) 1185
BcoDI GTCTC 2 cut(s) 140, 206
BfaI CTAG 2 cut(s) 405, 861
BfuAI ACCTGC 3 cut(s) 304, 464, 1366
BfuI GTATCC 1 cut(s) 1185
BglII AGATCT 2 cut(s) 612, 1236
BisI GCNGC 3 cut(s) 444, 573, 1158
BlsI GCNGC 3 cut(s) 445, 574, 1159
Bme1390I CCNGG 2 cut(s) 488, 555
Bme18I GGWCC 1 cut(s) 490
BmgT120I GGNCC 2 cut(s) 490, 908
BmiI GGNNCC 3 cut(s) 7, 348, 552
BmrFI CCNGG 2 cut(s) 488, 555
BmrI ACTGGG 2 cut(s) 1269, 1320
BmsI GCATC 3 cut(s) 250, 959, 1144
BmuI ACTGGG 2 cut(s) 1269, 1320
BpmI CTGGAG 1 cut(s) 1353
Bpu10I CCTNAGC 1 cut(s) 1026
BsaAI YACGTR 1 cut(s) 763
BsaJI CCNNGG 4 cut(s) 205, 351, 546, 554
BsaXI ACNNNNNCTCC 2 cut(s) 615, 645
Bsc4I CCNNNNNNNGG 5 cut(s) 15, 83, 84, 211, 763
Bse1I ACTGG 9 cut(s) 331, 451, 466, 677, 785, 991, 1014, 1275, 1326
BseBI CCWGG 2 cut(s) 488, 555
BseDI CCNNGG 4 cut(s) 205, 351, 546, 554
BseGI GGATG 4 cut(s) 265, 750, 829, 1123
BseLI CCNNNNNNNGG 5 cut(s) 15, 83, 84, 211, 763
BseMII CTCAG 5 cut(s) 146, 278, 314, 630, 1040
BseNI ACTGG 9 cut(s) 331, 451, 466, 677, 785, 991, 1014, 1275, 1326
BseRI GAGGAG 2 cut(s) 1244, 1306
BseSI GKGCMC 1 cut(s) 351
BseXI GCAGC 2 cut(s) 584, 1144
Bsh1236I CGCG 1 cut(s) 207
BshFI GGCC 1 cut(s) 910
BshNI GGYRCC 2 cut(s) 5, 346
BsiHKAI GWGCWC 2 cut(s) 69, 1260
BslFI GGGAC 4 cut(s) 40, 239, 448, 1093
BslI CCNNNNNNNGG 5 cut(s) 15, 83, 84, 211, 763
BsmAI GTCTC 2 cut(s) 140, 206
BsmBI CGTCTC 1 cut(s) 206
BsmFI GGGAC 4 cut(s) 40, 239, 448, 1093
BsmI GAATGC 1 cut(s) 166
BsnI GGCC 1 cut(s) 910
Bsp1286I GDGCHC 3 cut(s) 69, 351, 1260
Bsp143I GATC 6 cut(s) 121, 181, 523, 558, 612, 1236
BspACI CCGC 3 cut(s) 205, 207, 443
BspANI GGCC 1 cut(s) 910
BspCNI CTCAG 5 cut(s) 145, 277, 313, 629, 1039
BspFNI CGCG 1 cut(s) 207
BspHI TCATGA 1 cut(s) 1387
BspLI GGNNCC 3 cut(s) 7, 348, 552
BspMI ACCTGC 3 cut(s) 304, 464, 1366
BspPI GGATC 4 cut(s) 129, 176, 531, 566
BspT107I GGYRCC 2 cut(s) 5, 346
BsrI ACTGG 9 cut(s) 331, 451, 466, 677, 785, 991, 1014, 1275, 1326
BssECI CCNNGG 4 cut(s) 205, 351, 546, 554
BssMI GATC 6 cut(s) 121, 181, 523, 558, 612, 1236
BssNAI GTATAC 1 cut(s) 590
BssSI CACGAG 1 cut(s) 1083
BssT1I CCWWGG 1 cut(s) 546
Bst1107I GTATAC 1 cut(s) 590
Bst2BI CACGAG 1 cut(s) 1083
Bst2UI CCWGG 2 cut(s) 488, 555
Bst4CI ACNGT 4 cut(s) 34, 313, 502, 1111
BstAPI GCANNNNNTGC 1 cut(s) 1166
BstBAI YACGTR 1 cut(s) 763
BstC8I GCNNGC 3 cut(s) 379, 1023, 1148
BstDEI CTNAG 7 cut(s) 132, 156, 264, 300, 576, 616, 1026
BstDSI CCRYGG 1 cut(s) 205
BstF5I GGATG 4 cut(s) 265, 750, 829, 1123
BstFNI CGCG 1 cut(s) 207
BstHHI GCGC 1 cut(s) 467
BstKTI GATC 6 cut(s) 124, 184, 526, 561, 615, 1239
BstMAI GTCTC 2 cut(s) 140, 206
BstMBI GATC 6 cut(s) 121, 181, 523, 558, 612, 1236
BstMWI GCNNNNNNNGC 3 cut(s) 161, 947, 1166
BstNI CCWGG 2 cut(s) 488, 555
BstNSI RCATGY 1 cut(s) 1164
BstSCI CCNGG 2 cut(s) 486, 553
BstSLI GKGCMC 1 cut(s) 351
BstUI CGCG 1 cut(s) 207
BstV1I GCAGC 2 cut(s) 584, 1144
BstX2I RGATCY 3 cut(s) 181, 612, 1236
BstYI RGATCY 3 cut(s) 181, 612, 1236
BstZ17I GTATAC 1 cut(s) 590
BsuI GTATCC 1 cut(s) 1185
BsuRI GGCC 1 cut(s) 910
BtgI CCRYGG 1 cut(s) 205
BtsCI GGATG 4 cut(s) 265, 750, 829, 1123
BtsIMutI CAGTG 3 cut(s) 228, 705, 792
BveI ACCTGC 3 cut(s) 304, 464, 1366
Cac8I GCNNGC 3 cut(s) 379, 1023, 1148
CaiI CAGNNNCTG 1 cut(s) 46
CciI TCATGA 1 cut(s) 1387
CfoI GCGC 1 cut(s) 467
Cfr13I GGNCC 2 cut(s) 490, 908
Cfr42I CCGCGG 1 cut(s) 208
Csp6I GTAC 4 cut(s) 6, 454, 1068, 1164
CviAII CATG 6 cut(s) 59, 494, 938, 1151, 1161, 1388
CviQI GTAC 4 cut(s) 6, 454, 1068, 1164
DdeI CTNAG 7 cut(s) 132, 156, 264, 300, 576, 616, 1026
DpnI GATC 6 cut(s) 123, 183, 525, 560, 614, 1238
DpnII GATC 6 cut(s) 121, 181, 523, 558, 612, 1236
DrdI GACNNNNNNGTC 1 cut(s) 1275
DseDI GACNNNNNNGTC 1 cut(s) 1275
Ecl136II GAGCTC 1 cut(s) 1258
Eco130I CCWWGG 1 cut(s) 546
Eco24I GRGCYC 1 cut(s) 1260
Eco47I GGWCC 1 cut(s) 490
Eco53kI GAGCTC 1 cut(s) 1258
Eco57I CTGAAG 2 cut(s) 266, 729
EcoICRI GAGCTC 1 cut(s) 1258
EcoRII CCWGG 2 cut(s) 486, 553
EcoT14I CCWWGG 1 cut(s) 546
EcoT38I GRGCYC 1 cut(s) 1260
ErhI CCWWGG 1 cut(s) 546
Esp3I CGTCTC 1 cut(s) 206
FaeI CATG 6 cut(s) 62, 497, 941, 1154, 1164, 1391
FalI AAGNNNNNCTT 2 cut(s) 350, 382
FaqI GGGAC 4 cut(s) 40, 239, 448, 1093
FatI CATG 6 cut(s) 58, 493, 937, 1150, 1160, 1387
FauNDI CATATG 1 cut(s) 778
FblI GTMKAC 1 cut(s) 589
Fnu4HI GCNGC 3 cut(s) 444, 573, 1158
FokI GGATG 4 cut(s) 272, 757, 836, 1130
FriOI GRGCYC 1 cut(s) 1260
Fsp4HI GCNGC 3 cut(s) 444, 573, 1158
FspBI CTAG 2 cut(s) 405, 861
GlaI GCGC 1 cut(s) 466
GluI GCNGC 3 cut(s) 444, 573, 1158
GsuI CTGGAG 1 cut(s) 1353
HaeIII GGCC 1 cut(s) 910
HhaI GCGC 1 cut(s) 467
Hin1II CATG 6 cut(s) 62, 497, 941, 1154, 1164, 1391
Hin6I GCGC 1 cut(s) 465
HinP1I GCGC 1 cut(s) 465
HincII GTYRAC 1 cut(s) 988
HindII GTYRAC 1 cut(s) 988
HinfI GANTC 9 cut(s) 215, 508, 749, 790, 884, 1044, 1081, 1198, 1289
HphI GGTGA 6 cut(s) 40, 124, 737, 779, 851, 1298
Hpy166II GTNNAC 5 cut(s) 309, 419, 590, 988, 1265
Hpy188I TCNGA 4 cut(s) 126, 303, 1141, 1224
Hpy188III TCNNGA 7 cut(s) 527, 608, 849, 888, 1240, 1370, 1388
Hpy8I GTNNAC 5 cut(s) 309, 419, 590, 988, 1265
HpyAV CCTTC 3 cut(s) 184, 704, 713
HpyCH4III ACNGT 4 cut(s) 34, 313, 502, 1111
HpyCH4IV ACGT 2 cut(s) 762, 1413
HpyCH4V TGCA 6 cut(s) 164, 473, 941, 1150, 1160, 1250
HpyF10VI GCNNNNNNNGC 3 cut(s) 161, 947, 1166
HpyF3I CTNAG 7 cut(s) 132, 156, 264, 300, 576, 616, 1026
HpySE526I ACGT 2 cut(s) 762, 1413
Hsp92II CATG 6 cut(s) 62, 497, 941, 1154, 1164, 1391
HspAI GCGC 1 cut(s) 465
KpnI GGTACC 1 cut(s) 9
KspI CCGCGG 1 cut(s) 208
Kzo9I GATC 6 cut(s) 121, 181, 523, 558, 612, 1236
LmnI GCTCC 4 cut(s) 550, 947, 1231, 1372
Lsp1109I GCAGC 2 cut(s) 584, 1144
LweI GCATC 3 cut(s) 250, 959, 1144
MaeI CTAG 2 cut(s) 405, 861
MaeII ACGT 2 cut(s) 762, 1413
MaeIII GTNAC 4 cut(s) 28, 362, 496, 787
MalI GATC 6 cut(s) 123, 183, 525, 560, 614, 1238
MboI GATC 6 cut(s) 121, 181, 523, 558, 612, 1236
MboII GAAGA 3 cut(s) 210, 259, 728
MfeI CAATTG 3 cut(s) 468, 876, 942
MflI RGATCY 3 cut(s) 181, 612, 1236
MhlI GDGCHC 3 cut(s) 69, 351, 1260
MlyI GAGTC 2 cut(s) 784, 1075
MmeI TCCRAC 1 cut(s) 601
MnlI CCTC 5 cut(s) 361, 532, 617, 1222, 1327
MseI TTAA 7 cut(s) 105, 519, 695, 1032, 1218, 1395, 1410
MslI CAYNNNNRTG 2 cut(s) 566, 777
MspA1I CMGCKG 2 cut(s) 207, 1295
MspR9I CCNGG 2 cut(s) 488, 555
MunI CAATTG 3 cut(s) 468, 876, 942
Mva1269I GAATGC 1 cut(s) 166
MvaI CCWGG 2 cut(s) 488, 555
MvnI CGCG 1 cut(s) 207
MwoI GCNNNNNNNGC 3 cut(s) 161, 947, 1166
NdeI CATATG 1 cut(s) 778
NdeII GATC 6 cut(s) 121, 181, 523, 558, 612, 1236
NlaIII CATG 6 cut(s) 62, 497, 941, 1154, 1164, 1391
NlaIV GGNNCC 3 cut(s) 7, 348, 552
NmeAIII GCCGAG 1 cut(s) 332
NmuCI GTSAC 3 cut(s) 28, 496, 787
NspI RCATGY 1 cut(s) 1164
OliI CACNNNNGTG 1 cut(s) 566
PagI TCATGA 1 cut(s) 1387
PaqCI CACCTGC 1 cut(s) 304
PctI GAATGC 1 cut(s) 166
PfeI GAWTC 7 cut(s) 215, 508, 749, 884, 1044, 1198, 1289
PflFI GACNNNGTC 1 cut(s) 494
PflMI CCANNNNNTGG 1 cut(s) 763
PkrI GCNGC 3 cut(s) 445, 574, 1159
PleI GAGTC 2 cut(s) 784, 1075
PpsI GAGTC 2 cut(s) 784, 1075
Ppu21I YACGTR 1 cut(s) 763
Psp124BI GAGCTC 1 cut(s) 1260
Psp1406I AACGTT 1 cut(s) 1413
Psp6I CCWGG 2 cut(s) 486, 553
PspGI CCWGG 2 cut(s) 486, 553
PspN4I GGNNCC 3 cut(s) 7, 348, 552
PspPI GGNCC 2 cut(s) 490, 908
PstNI CAGNNNCTG 1 cut(s) 46
PsuI RGATCY 3 cut(s) 181, 612, 1236
PsyI GACNNNGTC 1 cut(s) 494
PvuII CAGCTG 1 cut(s) 1295
RsaI GTAC 4 cut(s) 7, 455, 1069, 1165
RsaNI GTAC 4 cut(s) 6, 454, 1068, 1164
RseI CAYNNNNRTG 2 cut(s) 566, 777
SacI GAGCTC 1 cut(s) 1260
SacII CCGCGG 1 cut(s) 208
SaqAI TTAA 7 cut(s) 105, 519, 695, 1032, 1218, 1395, 1410
SatI GCNGC 3 cut(s) 444, 573, 1158
Sau3AI GATC 6 cut(s) 121, 181, 523, 558, 612, 1236
Sau96I GGNCC 2 cut(s) 490, 908
SchI GAGTC 2 cut(s) 784, 1075
ScrFI CCNGG 2 cut(s) 488, 555
SduI GDGCHC 3 cut(s) 69, 351, 1260
SfaNI GCATC 3 cut(s) 250, 959, 1144
Sfr303I CCGCGG 1 cut(s) 208
SgrBI CCGCGG 1 cut(s) 208
SinI GGWCC 1 cut(s) 490
SmiMI CAYNNNNRTG 2 cut(s) 566, 777
SsiI CCGC 3 cut(s) 205, 207, 443
SspMI CTAG 2 cut(s) 405, 861
SstI GAGCTC 1 cut(s) 1260
StyD4I CCNGG 2 cut(s) 486, 553
StyI CCWWGG 1 cut(s) 546
TaaI ACNGT 4 cut(s) 34, 313, 502, 1111
TaiI ACGT 2 cut(s) 765, 1416
TatI WGTACW 2 cut(s) 1067, 1163
TauI GCSGC 1 cut(s) 446
TfiI GAWTC 7 cut(s) 215, 508, 749, 884, 1044, 1198, 1289
Tru1I TTAA 7 cut(s) 105, 519, 695, 1032, 1218, 1395, 1410
Tru9I TTAA 7 cut(s) 105, 519, 695, 1032, 1218, 1395, 1410
TscAI CASTG 3 cut(s) 235, 712, 792
TseFI GTSAC 3 cut(s) 28, 496, 787
TseI GCWGC 2 cut(s) 572, 1157
Tsp45I GTSAC 3 cut(s) 28, 496, 787
TspDTI ATGAA 2 cut(s) 675, 1407
TspGWI ACGGA 1 cut(s) 471
TspRI CASTG 3 cut(s) 235, 712, 792
Tth111I GACNNNGTC 1 cut(s) 494
Van91I CCANNNNNTGG 1 cut(s) 763
VpaK11BI GGWCC 1 cut(s) 490
XceI RCATGY 1 cut(s) 1164
XcmI CCANNNNNNNNNTGG 4 cut(s) 85, 458, 500, 1377
XmiI GTMKAC 1 cut(s) 589
XspI CTAG 2 cut(s) 405, 861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.