Rmu_sc0001579.1_g000001

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001579.1
Physical Location & Seq
Reverse (-)
2 .. 283
282 bp
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UTR
Exon/CDS
Intron
Rmu_sc0001579.1_g000001.1.cds

Sequence Viewer

Length: 282 bp
atgattgattggtgttttatgcgatttggtaatcggattcttctgcgtgcagataacatggaagccaagcttaggtctgtcacagcgacgctgtttctttgtttcctcctgtttcccttggttttttctgcatccagtgatgggttgctccgggttggactgaaaaagaggaagtttgatcaaaacaaccgggttgctgctaacctttattccaagaatggggatgctgtgacagctgttatccggaaatataatcttggtggaactctgggagatgatcag

Protein Analysis

94

Amino Acids

10.59

Weight (kDa)

9.83

Isoelectric Point (pI)

23.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 243
AfiI CCNNNNNNNGG 3 cut(s) 72, 141, 219
AluBI AGCT 2 cut(s) 70, 236
AluI AGCT 2 cut(s) 70, 236
Aor13HI TCCGGA 1 cut(s) 243
ApeKI GCWGC 1 cut(s) 197
AsuC2I CCSGG 2 cut(s) 152, 191
BbvI GCAGC 1 cut(s) 184
BccI CCATC 1 cut(s) 134
BclI TGATCA 2 cut(s) 178, 277
BcnI CCSGG 2 cut(s) 152, 191
BisI GCNGC 1 cut(s) 198
BlsI GCNGC 1 cut(s) 199
Bme1390I CCNGG 2 cut(s) 152, 191
BmrFI CCNGG 2 cut(s) 152, 191
BmsI GCATC 2 cut(s) 140, 214
Bpu10I CCTNAGC 1 cut(s) 71
BpuMI CCSGG 2 cut(s) 152, 191
BsaJI CCNNGG 1 cut(s) 117
BsaWI WCCGGW 1 cut(s) 243
Bsc4I CCNNNNNNNGG 3 cut(s) 72, 141, 219
Bse1I ACTGG 1 cut(s) 135
BseAI TCCGGA 1 cut(s) 243
BseDI CCNNGG 1 cut(s) 117
BseGI GGATG 2 cut(s) 131, 229
BseLI CCNNNNNNNGG 3 cut(s) 72, 141, 219
BseNI ACTGG 1 cut(s) 135
BseXI GCAGC 1 cut(s) 184
BsgI GTGCAG 1 cut(s) 69
BsiSI CCGG 3 cut(s) 151, 190, 244
BslI CCNNNNNNNGG 3 cut(s) 72, 141, 219
Bsp13I TCCGGA 1 cut(s) 243
Bsp143I GATC 2 cut(s) 178, 277
BspEI TCCGGA 1 cut(s) 243
BsrI ACTGG 1 cut(s) 135
BssECI CCNNGG 1 cut(s) 117
BssMI GATC 2 cut(s) 178, 277
BssT1I CCWWGG 1 cut(s) 117
BstC8I GCNNGC 1 cut(s) 48
BstDEI CTNAG 1 cut(s) 71
BstF5I GGATG 2 cut(s) 131, 229
BstKTI GATC 2 cut(s) 181, 280
BstMBI GATC 2 cut(s) 178, 277
BstMWI GCNNNNNNNGC 1 cut(s) 233
BstSCI CCNGG 2 cut(s) 150, 189
BstV1I GCAGC 1 cut(s) 184
BtsCI GGATG 2 cut(s) 131, 229
BtsIMutI CAGTG 1 cut(s) 142
Cac8I GCNNGC 1 cut(s) 48
CseI GACGC 1 cut(s) 97
CviAII CATG 1 cut(s) 58
CviJI RGCY 3 cut(s) 65, 70, 236
CviKI_1 RGCY 3 cut(s) 65, 70, 236
DdeI CTNAG 1 cut(s) 71
DpnI GATC 2 cut(s) 180, 279
DpnII GATC 2 cut(s) 178, 277
Eco130I CCWWGG 1 cut(s) 117
EcoT14I CCWWGG 1 cut(s) 117
ErhI CCWWGG 1 cut(s) 117
FaeI CATG 1 cut(s) 61
FaiI YATR 3 cut(s) 20, 59, 252
FalI AAGNNNNNCTT 2 cut(s) 54, 86
FatI CATG 1 cut(s) 57
FbaI TGATCA 2 cut(s) 178, 277
Fnu4HI GCNGC 1 cut(s) 198
FokI GGATG 2 cut(s) 118, 236
Fsp4HI GCNGC 1 cut(s) 198
GluI GCNGC 1 cut(s) 198
HapII CCGG 3 cut(s) 151, 190, 244
HgaI GACGC 1 cut(s) 97
Hin1II CATG 1 cut(s) 61
HindIII AAGCTT 1 cut(s) 68
HinfI GANTC 1 cut(s) 37
HpaII CCGG 3 cut(s) 151, 190, 244
Hpy188I TCNGA 1 cut(s) 36
Hpy188III TCNNGA 1 cut(s) 244
Hpy99I CGWCG 1 cut(s) 91
HpyCH4V TGCA 2 cut(s) 50, 131
HpyF10VI GCNNNNNNNGC 1 cut(s) 233
HpyF3I CTNAG 1 cut(s) 71
Hsp92II CATG 1 cut(s) 61
Kpn2I TCCGGA 1 cut(s) 243
Ksp22I TGATCA 2 cut(s) 178, 277
Kzo9I GATC 2 cut(s) 178, 277
LmnI GCTCC 1 cut(s) 153
LpnPI CCDG 6 cut(s) 122, 148, 164, 203, 254, 257
Lsp1109I GCAGC 1 cut(s) 184
LweI GCATC 2 cut(s) 140, 214
MaeIII GTNAC 2 cut(s) 79, 229
MalI GATC 2 cut(s) 180, 279
MboI GATC 2 cut(s) 178, 277
MboII GAAGA 1 cut(s) 32
MmeI TCCRAC 1 cut(s) 136
MnlI CCTC 2 cut(s) 116, 162
MroI TCCGGA 1 cut(s) 243
MspA1I CMGCKG 1 cut(s) 236
MspI CCGG 3 cut(s) 151, 190, 244
MspR9I CCNGG 2 cut(s) 152, 191
MwoI GCNNNNNNNGC 1 cut(s) 233
NciI CCSGG 2 cut(s) 152, 191
NdeII GATC 2 cut(s) 178, 277
NlaIII CATG 1 cut(s) 61
NmuCI GTSAC 2 cut(s) 79, 229
PfeI GAWTC 1 cut(s) 37
PkrI GCNGC 1 cut(s) 199
PvuII CAGCTG 1 cut(s) 236
SatI GCNGC 1 cut(s) 198
Sau3AI GATC 2 cut(s) 178, 277
ScrFI CCNGG 2 cut(s) 152, 191
SetI ASST 4 cut(s) 72, 77, 207, 238
SfaNI GCATC 2 cut(s) 140, 214
StyD4I CCNGG 2 cut(s) 150, 189
StyI CCWWGG 1 cut(s) 117
TfiI GAWTC 1 cut(s) 37
TscAI CASTG 1 cut(s) 142
TseFI GTSAC 2 cut(s) 79, 229
TseI GCWGC 1 cut(s) 197
Tsp45I GTSAC 2 cut(s) 79, 229
TspRI CASTG 1 cut(s) 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.