Prupe.4G217700_v2.0.a1

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
13651237 .. 13656034
4798 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G217700.1

Sequence Viewer

Length: 1545 bp
ATGGAAACCAAACTTAAGTCCGTTACAGCGACGCTCTTTCTGTGCTTCCTCTTGTTTCCGTTGGTTTTTTCTGAATCCAATGATGGGTTGGTCCGGGTTGGGCTCAAGAAGAGGAAATTTGATCAAAATAACCGGGTTGCTGCCCAGATTGAATCCAAGGAAGGAGAGGCTCTGAGAGCTTCTCTCCTTAAATATCGTCTGCGTGGAAATTTGGCTGATTCCCAGGACACTGATATTGTATCTCTCAAGAATTACATGGATGCTCAATACTTTGGTGAGATTGGTATTGGCACTCCCCCTCAGAAGTTCACTGTGATATTTGATACTGGTAGTTCAAATTTGTGGGTTCCTTCAGCCAAGTGTTATTTCTCGATTGCCTGCTATTTACACCCAAAATACAAGTCAAGCAGTTCGAGCACCTACAACAAAAATGGTAAGCCTGCAGCAATCCACTATGGAACTGGAGCTATTTCTGGGTTCTTCAGTGAAGACCATGTAACTATTGGTGATCTCGTGGTCAAAGATCAGGAATTTATTGAGGCAACCAAGGAGCCTGGAGTCACATTTTTGGTAGCCAAATTTGATGGCATACTTGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGTACCTGTGTGGTACAACATGGTCAATCAGGGTCTCCTGAAGGAACCAGTTTTCTCATTCTGGTTTAATCGTAATGCTGATGAAGAAGAAGGAGGTGAAATTGTATTTGGTGGAGTGGATCCTAATCATTATAAGGGAGAGCACACTTACGTTCCTGTTACGCAGAAAGGCTATTGGCAGTTTGACATGGGTGATGTTATGATTGATGGTAAAACAACTGGATTTTGTGCTGGTGGCTGTTCAGCAATTGCTGATTCTGGAACCTCTTTGTTAGTTGGCCCAACGACTATTATTACTGAACTCAATCATGCCATTGGAGCCTCTGGGATTGTAAGTCAAGAATGCAAGACTGTAGTCGCACAATATGGAGAGACCATAATTGAGAGGATTTTAGCCAAGGATCAACCACAGAAAATCTGCTCTCAGATTGGTTTGTGCACATTTGATGGTACTCATGGTGTAAGTACCGAAATCAAGAGTGTTGTGGAAGAGAACACTCACAAGGTATCTGGGGGCTTATCTGATGCATCATGCTCTGCTTGTGAGATGACGGTTGTATGGATGCAAAACCAGCTCAAGCAGAATCAGACACAGGAACGAATTCTTGAATATGTGAATCAGCTCTGTGAGCGGCTGCCTAGCCCAATGGGAGAATCTGCAGTTGATTGTAGTGGTTTGTCTTCCATGCCTAGTGTTTCCTTTACTATTGGTGGAAGAACATTTGATCTTACCCCTGAGCAGTATGTGCTCAAAGTAGGTGAGGGAGATGCTGCACAATGCATTAGTGGATTTACTGCTTTGGATGTCCCACCACCCCGTGGACCTCTCTGGATCCTGGGGGACGTATTCATGGGTCGCTACCATACCGTGTTCGACTATGGCAACGAGAGAATTGGGTTTGCAGAAGCTGCATAG

Protein Analysis

515

Amino Acids

56.03

Weight (kDa)

5.05

Isoelectric Point (pI)

36.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 762
AccB7I CCANNNNNTGG 1 cut(s) 1448
AccBSI CCGCTC 1 cut(s) 1261
AciI CCGC 1 cut(s) 1261
AclWI GGATC 5 cut(s) 743, 756, 1038, 1456, 1469
AcsI RAATTY 6 cut(s) 116, 208, 337, 530, 578, 1230
AcuI CTGAAG 3 cut(s) 336, 466, 689
AdeI CACNNNGTG 1 cut(s) 1448
AfaI GTAC 4 cut(s) 633, 644, 1081, 1096
AfiI CCNNNNNNNGG 2 cut(s) 84, 1448
AflII CTTAAG 1 cut(s) 14
AgsI TTSAA 4 cut(s) 152, 336, 608, 1238
AjnI CCWGG 3 cut(s) 222, 553, 1464
AjuI GAANNNNNNNTTGG 4 cut(s) 350, 382, 720, 752
AluBI AGCT 5 cut(s) 179, 467, 1204, 1252, 1538
AluI AGCT 5 cut(s) 179, 467, 1204, 1252, 1538
Alw21I GWGCWC 4 cut(s) 419, 774, 1070, 1380
Alw26I GTCTC 2 cut(s) 668, 995
Alw44I GTGCAC 1 cut(s) 1066
AlwI GGATC 5 cut(s) 743, 756, 1038, 1456, 1469
AlwNI CAGNNNCTG 1 cut(s) 1538
AoxI GGCC 1 cut(s) 907
ApaLI GTGCAC 1 cut(s) 1066
ApeKI GCWGC 5 cut(s) 140, 443, 1264, 1400, 1538
ApoI RAATTY 6 cut(s) 116, 208, 337, 530, 578, 1230
ArsI GACNNNNNNTTYG 2 cut(s) 386, 418
Asp700I GAANNNNTTC 1 cut(s) 1230
AspS9I GGNCC 3 cut(s) 91, 908, 1451
AsuC2I CCSGG 2 cut(s) 95, 134
AsuHPI GGTGA 5 cut(s) 287, 518, 737, 833, 1400
AvaII GGWCC 2 cut(s) 91, 1451
BaeGI GKGCMC 1 cut(s) 1070
BamHI GGATCC 2 cut(s) 748, 1461
BanII GRGCYC 1 cut(s) 105
BauI CACGAG 1 cut(s) 512
BbsI GAAGAC 2 cut(s) 495, 1302
Bbv12I GWGCWC 4 cut(s) 419, 774, 1070, 1380
BbvI GCAGC 5 cut(s) 127, 455, 1251, 1387, 1525
BccI CCATC 4 cut(s) 77, 578, 830, 1070
BciT130I CCWGG 3 cut(s) 224, 555, 1466
BclI TGATCA 1 cut(s) 121
BcnI CCSGG 2 cut(s) 95, 134
BcoDI GTCTC 2 cut(s) 668, 995
BfaI CTAG 2 cut(s) 1269, 1320
BfmI CTRYAG 3 cut(s) 441, 981, 1287
BfrI CTTAAG 1 cut(s) 14
BisI GCNGC 6 cut(s) 141, 444, 1262, 1265, 1401, 1539
BlsI GCNGC 6 cut(s) 142, 445, 1263, 1266, 1402, 1540
Bme1390I CCNGG 5 cut(s) 95, 134, 224, 555, 1466
Bme18I GGWCC 2 cut(s) 91, 1451
BmgT120I GGNCC 3 cut(s) 91, 908, 1451
BmiI GGNNCC 7 cut(s) 348, 552, 675, 750, 892, 949, 1463
BmrFI CCNGG 5 cut(s) 95, 134, 224, 555, 1466
BmsI GCATC 5 cut(s) 250, 1144, 1166, 1182, 1387
BoxI GACNNNNGTC 1 cut(s) 983
BpiI GAAGAC 2 cut(s) 495, 1302
BplI GAGNNNNNCTC 4 cut(s) 166, 198, 168, 200
BpmI CTGGAG 2 cut(s) 483, 576
Bpu10I CCTNAGC 1 cut(s) 1365
BpuEI CTTGAG 3 cut(s) 89, 230, 1190
BpuMI CCSGG 2 cut(s) 95, 134
BsaBI GATNNNNATC 1 cut(s) 753
BsaI GGTCTC 2 cut(s) 668, 995
BsaJI CCNNGG 6 cut(s) 156, 222, 546, 1026, 1447, 1465
Bsc4I CCNNNNNNNGG 2 cut(s) 84, 1448
Bse1I ACTGG 4 cut(s) 331, 466, 677, 853
Bse8I GATNNNNATC 1 cut(s) 753
BseBI CCWGG 3 cut(s) 224, 555, 1466
BseDI CCNNGG 6 cut(s) 156, 222, 546, 1026, 1447, 1465
BseGI GGATG 3 cut(s) 265, 1197, 1438
BseJI GATNNNNATC 1 cut(s) 753
BseLI CCNNNNNNNGG 2 cut(s) 84, 1448
BseMII CTCAG 4 cut(s) 164, 314, 1067, 1356
BseNI ACTGG 4 cut(s) 331, 466, 677, 853
BseSI GKGCMC 1 cut(s) 1070
BseXI GCAGC 5 cut(s) 127, 455, 1251, 1387, 1525
BsgI GTGCAG 1 cut(s) 1386
BshFI GGCC 1 cut(s) 909
BsiHKAI GWGCWC 4 cut(s) 419, 774, 1070, 1380
BsiSI CCGG 2 cut(s) 94, 133
BslFI GGGAC 2 cut(s) 1421, 1484
BslI CCNNNNNNNGG 2 cut(s) 84, 1448
BsmAI GTCTC 2 cut(s) 668, 995
BsmFI GGGAC 2 cut(s) 1421, 1484
BsmI GAATGC 1 cut(s) 977
BsnI GGCC 1 cut(s) 909
Bso31I GGTCTC 2 cut(s) 668, 995
Bsp1286I GDGCHC 5 cut(s) 105, 419, 774, 1070, 1380
Bsp143I GATC 7 cut(s) 121, 508, 523, 748, 1030, 1354, 1461
BspACI CCGC 1 cut(s) 1261
BspANI GGCC 1 cut(s) 909
BspCNI CTCAG 4 cut(s) 165, 313, 1066, 1357
BspLI GGNNCC 7 cut(s) 348, 552, 675, 750, 892, 949, 1463
BspMAI CTGCAG 2 cut(s) 445, 1291
BspPI GGATC 5 cut(s) 743, 756, 1038, 1456, 1469
BspTI CTTAAG 1 cut(s) 14
BspTNI GGTCTC 2 cut(s) 668, 995
BsrBI CCGCTC 1 cut(s) 1261
BsrI ACTGG 4 cut(s) 331, 466, 677, 853
BssECI CCNNGG 6 cut(s) 156, 222, 546, 1026, 1447, 1465
BssMI GATC 7 cut(s) 121, 508, 523, 748, 1030, 1354, 1461
BssSI CACGAG 1 cut(s) 512
BssT1I CCWWGG 3 cut(s) 156, 546, 1026
Bst2BI CACGAG 1 cut(s) 512
Bst2UI CCWGG 3 cut(s) 224, 555, 1466
Bst4CI ACNGT 4 cut(s) 313, 982, 1183, 1498
Bst6I CTCTTC 2 cut(s) 104, 1113
BstAFI CTTAAG 1 cut(s) 14
BstAPI GCANNNNNTGC 2 cut(s) 1375, 1538
BstC8I GCNNGC 2 cut(s) 379, 441
BstDEI CTNAG 4 cut(s) 173, 300, 1053, 1365
BstDSI CCRYGG 1 cut(s) 1447
BstF5I GGATG 3 cut(s) 265, 1197, 1438
BstKTI GATC 7 cut(s) 124, 511, 526, 751, 1033, 1357, 1464
BstMAI GTCTC 2 cut(s) 668, 995
BstMBI GATC 7 cut(s) 121, 508, 523, 748, 1030, 1354, 1461
BstMWI GCNNNNNNNGC 7 cut(s) 176, 414, 947, 1201, 1258, 1375, 1538
BstNI CCWGG 3 cut(s) 224, 555, 1466
BstPAI GACNNNNGTC 1 cut(s) 983
BstSCI CCNGG 5 cut(s) 93, 132, 222, 553, 1464
BstSFI CTRYAG 3 cut(s) 441, 981, 1287
BstSLI GKGCMC 1 cut(s) 1070
BstV1I GCAGC 5 cut(s) 127, 455, 1251, 1387, 1525
BstV2I GAAGAC 2 cut(s) 495, 1302
BstX2I RGATCY 2 cut(s) 748, 1461
BstYI RGATCY 2 cut(s) 748, 1461
BsuRI GGCC 1 cut(s) 909
BtgI CCRYGG 1 cut(s) 1447
BtsCI GGATG 3 cut(s) 265, 1197, 1438
BtsIMutI CAGTG 3 cut(s) 228, 309, 490
Cac8I GCNNGC 2 cut(s) 379, 441
CaiI CAGNNNCTG 1 cut(s) 1538
Cfr13I GGNCC 3 cut(s) 91, 908, 1451
CseI GACGC 1 cut(s) 40
Csp6I GTAC 4 cut(s) 632, 643, 1080, 1095
CviAII CATG 9 cut(s) 256, 494, 649, 817, 938, 1085, 1161, 1315, 1480
CviQI GTAC 4 cut(s) 632, 643, 1080, 1095
DdeI CTNAG 4 cut(s) 173, 300, 1053, 1365
DpnI GATC 7 cut(s) 123, 510, 525, 750, 1032, 1356, 1463
DpnII GATC 7 cut(s) 121, 508, 523, 748, 1030, 1354, 1461
DraIII CACNNNGTG 1 cut(s) 1448
Eam1104I CTCTTC 2 cut(s) 104, 1113
EarI CTCTTC 2 cut(s) 104, 1113
Eco130I CCWWGG 3 cut(s) 156, 546, 1026
Eco24I GRGCYC 1 cut(s) 105
Eco31I GGTCTC 2 cut(s) 668, 995
Eco32I GATATC 1 cut(s) 615
Eco47I GGWCC 2 cut(s) 91, 1451
Eco57I CTGAAG 3 cut(s) 336, 466, 689
EcoRI GAATTC 1 cut(s) 1230
EcoRII CCWGG 3 cut(s) 222, 553, 1464
EcoRV GATATC 1 cut(s) 615
EcoT14I CCWWGG 3 cut(s) 156, 546, 1026
EcoT22I ATGCAT 2 cut(s) 1159, 1412
EcoT38I GRGCYC 1 cut(s) 105
ErhI CCWWGG 3 cut(s) 156, 546, 1026
FaeI CATG 9 cut(s) 259, 497, 652, 820, 941, 1088, 1164, 1318, 1483
FaqI GGGAC 2 cut(s) 1421, 1484
FatI CATG 9 cut(s) 255, 493, 648, 816, 937, 1084, 1160, 1314, 1479
FbaI TGATCA 1 cut(s) 121
Fnu4HI GCNGC 6 cut(s) 141, 444, 1262, 1265, 1401, 1539
FokI GGATG 3 cut(s) 272, 1204, 1445
FriOI GRGCYC 1 cut(s) 105
Fsp4HI GCNGC 6 cut(s) 141, 444, 1262, 1265, 1401, 1539
FspBI CTAG 2 cut(s) 1269, 1320
GluI GCNGC 6 cut(s) 141, 444, 1262, 1265, 1401, 1539
GsuI CTGGAG 2 cut(s) 483, 576
HaeIII GGCC 1 cut(s) 909
HapII CCGG 2 cut(s) 94, 133
HgaI GACGC 1 cut(s) 40
Hin1II CATG 9 cut(s) 259, 497, 652, 820, 941, 1088, 1164, 1318, 1483
HinfI GANTC 8 cut(s) 74, 152, 218, 558, 884, 1213, 1246, 1283
HpaII CCGG 2 cut(s) 94, 133
HphI GGTGA 5 cut(s) 287, 518, 737, 833, 1400
Hpy166II GTNNAC 3 cut(s) 309, 1068, 1451
Hpy188I TCNGA 6 cut(s) 73, 174, 303, 1056, 1153, 1218
Hpy8I GTNNAC 3 cut(s) 309, 1068, 1451
Hpy99I CGWCG 1 cut(s) 34
HpyAV CCTTC 4 cut(s) 155, 360, 664, 713
HpyCH4III ACNGT 4 cut(s) 313, 982, 1183, 1498
HpyCH4IV ACGT 2 cut(s) 780, 1473
HpyF10VI GCNNNNNNNGC 7 cut(s) 176, 414, 947, 1201, 1258, 1375, 1538
HpyF3I CTNAG 4 cut(s) 173, 300, 1053, 1365
HpySE526I ACGT 2 cut(s) 780, 1473
Hsp92II CATG 9 cut(s) 259, 497, 652, 820, 941, 1088, 1164, 1318, 1483
Ksp22I TGATCA 1 cut(s) 121
Kzo9I GATC 7 cut(s) 121, 508, 523, 748, 1030, 1354, 1461
LmnI GCTCC 3 cut(s) 464, 550, 947
Lsp1109I GCAGC 5 cut(s) 127, 455, 1251, 1387, 1525
LweI GCATC 5 cut(s) 250, 1144, 1166, 1182, 1387
MaeI CTAG 2 cut(s) 1269, 1320
MaeII ACGT 2 cut(s) 780, 1473
MaeIII GTNAC 4 cut(s) 22, 496, 559, 787
MalI GATC 7 cut(s) 123, 510, 525, 750, 1032, 1356, 1463
MbiI CCGCTC 1 cut(s) 1261
MboI GATC 7 cut(s) 121, 508, 523, 748, 1030, 1354, 1461
MboII GAAGA 8 cut(s) 121, 472, 500, 725, 728, 1130, 1302, 1356
MfeI CAATTG 1 cut(s) 876
MflI RGATCY 2 cut(s) 748, 1461
MhlI GDGCHC 5 cut(s) 105, 419, 774, 1070, 1380
MlyI GAGTC 1 cut(s) 567
MmeI TCCRAC 1 cut(s) 601
Mph1103I ATGCAT 2 cut(s) 1159, 1412
MroXI GAANNNNTTC 1 cut(s) 1230
MseI TTAA 3 cut(s) 15, 189, 696
MspCI CTTAAG 1 cut(s) 14
MspI CCGG 2 cut(s) 94, 133
MspR9I CCNGG 5 cut(s) 95, 134, 224, 555, 1466
MunI CAATTG 1 cut(s) 876
Mva1269I GAATGC 1 cut(s) 977
MvaI CCWGG 3 cut(s) 224, 555, 1466
MwoI GCNNNNNNNGC 7 cut(s) 176, 414, 947, 1201, 1258, 1375, 1538
NciI CCSGG 2 cut(s) 95, 134
NdeII GATC 7 cut(s) 121, 508, 523, 748, 1030, 1354, 1461
NlaIII CATG 9 cut(s) 259, 497, 652, 820, 941, 1088, 1164, 1318, 1483
NlaIV GGNNCC 7 cut(s) 348, 552, 675, 750, 892, 949, 1463
NmuCI GTSAC 1 cut(s) 559
NsiI ATGCAT 2 cut(s) 1159, 1412
PctI GAATGC 1 cut(s) 977
PdmI GAANNNNTTC 1 cut(s) 1230
PfeI GAWTC 7 cut(s) 74, 152, 218, 884, 1213, 1246, 1283
PflMI CCANNNNNTGG 1 cut(s) 1448
PkrI GCNGC 6 cut(s) 142, 445, 1263, 1266, 1402, 1540
PleI GAGTC 1 cut(s) 566
PpsI GAGTC 1 cut(s) 566
PshAI GACNNNNGTC 1 cut(s) 983
PsiI TTATAA 1 cut(s) 762
Psp6I CCWGG 3 cut(s) 222, 553, 1464
PspGI CCWGG 3 cut(s) 222, 553, 1464
PspN4I GGNNCC 7 cut(s) 348, 552, 675, 750, 892, 949, 1463
PspPI GGNCC 3 cut(s) 91, 908, 1451
PstI CTGCAG 2 cut(s) 445, 1291
PstNI CAGNNNCTG 1 cut(s) 1538
PsuI RGATCY 2 cut(s) 748, 1461
RsaI GTAC 4 cut(s) 633, 644, 1081, 1096
RsaNI GTAC 4 cut(s) 632, 643, 1080, 1095
SaqAI TTAA 3 cut(s) 15, 189, 696
SatI GCNGC 6 cut(s) 141, 444, 1262, 1265, 1401, 1539
Sau3AI GATC 7 cut(s) 121, 508, 523, 748, 1030, 1354, 1461
Sau96I GGNCC 3 cut(s) 91, 908, 1451
SchI GAGTC 1 cut(s) 567
ScrFI CCNGG 5 cut(s) 95, 134, 224, 555, 1466
SduI GDGCHC 5 cut(s) 105, 419, 774, 1070, 1380
SfaNI GCATC 5 cut(s) 250, 1144, 1166, 1182, 1387
SfcI CTRYAG 3 cut(s) 441, 981, 1287
SinI GGWCC 2 cut(s) 91, 1451
SmlI CTYRAG 4 cut(s) 14, 104, 245, 1205
SmoI CTYRAG 4 cut(s) 14, 104, 245, 1205
SsiI CCGC 1 cut(s) 1261
SspMI CTAG 2 cut(s) 1269, 1320
StyD4I CCNGG 5 cut(s) 93, 132, 222, 553, 1464
StyI CCWWGG 3 cut(s) 156, 546, 1026
TaaI ACNGT 4 cut(s) 313, 982, 1183, 1498
TaiI ACGT 2 cut(s) 783, 1476
TaqI TCGA 3 cut(s) 371, 413, 1503
TauI GCSGC 1 cut(s) 1264
TfiI GAWTC 7 cut(s) 74, 152, 218, 884, 1213, 1246, 1283
Tru1I TTAA 3 cut(s) 15, 189, 696
Tru9I TTAA 3 cut(s) 15, 189, 696
TscAI CASTG 3 cut(s) 235, 316, 490
TseFI GTSAC 1 cut(s) 559
TseI GCWGC 5 cut(s) 140, 443, 1264, 1400, 1538
Tsp45I GTSAC 1 cut(s) 559
TspDTI ATGAA 2 cut(s) 726, 1468
TspGWI ACGGA 2 cut(s) 10, 48
TspRI CASTG 3 cut(s) 235, 316, 490
Van91I CCANNNNNTGG 1 cut(s) 1448
Vha464I CTTAAG 1 cut(s) 14
VneI GTGCAC 1 cut(s) 1066
VpaK11BI GGWCC 2 cut(s) 91, 1451
XapI RAATTY 6 cut(s) 116, 208, 337, 530, 578, 1230
XcmI CCANNNNNNNNNTGG 3 cut(s) 85, 458, 500
XmnI GAANNNNTTC 1 cut(s) 1230
XspI CTAG 2 cut(s) 1269, 1320
Zsp2I ATGCAT 2 cut(s) 1159, 1412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.