pycom11g18820

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
21039139 .. 21043776
4638 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g18820.7

Sequence Viewer

Length: 1590 bp
ATGGGCTTGTGCCATTCGGACCCAAAGCTAATCATCAGAGACTCTGTAGTCTTCACCACACACGAGCACAGCTCATTCGCCTTGTGGGAGGTGTTTGGGGAAAAGCGCACTCCTCCTTTCTCATCGTCTTCCTGCCTACTTACTTTAAACATGGAAACCAAACTCAAATCTGTTACAGCGACTCTCTTTCTGTGCTTGCTCTTGTGTCCGTTGGTTTTCTGCGAGTCTAATGATGGGTTGCTCCGGATTGGTCTCAAAAAGAGGAAACTTGATCATAATAACAGGGTTGCTTCCCAGATTGATTCCAAGGAAGGAGAGGCTCTGAGAGCTGCTCTCCAAAAGTATCGTCTGGGTGGGAATTTGGCTGAGTCTGAGGACATTGATATTGTATCTCTCAAGAATTACATGGATGCTCAATACTTTGGTGAGATTGGTATTGGCACTCCCCCTCAGAAGTTCACTGTGATATTTGATACTGGTAAGCCTGCAGCCATCCAGTACGGAACTGGAGCTATTTCTGGGTTCTTTAGTGAAGATCATGTCACAGTTGGCGATCTTGTGGTTAAAGATCAGGAATTTATTGAGGCAACAAAGGAACCCGGCATCACATTCCTGGTAGCCAAATTTGATGGCATACTTGGACTTGGATTTCAAGAGATTTCAGTTGGAAATGCTGTACCTGTGTGGTATAACATGGTCAATCAGGGTCTCCTGAAGGAACCAGTTTTCTCATTCTGGTTTAACCGTAATGCTGATGAAGAAGAAGGAGGTGAAATTGTTTTTGGTGGAGTGGACCCCAATCACTACAAGGGAAAGCACACATATGTTCCTGTTACACAGAAAGGCTATTGGCAGTTTGACATGGGTGATGTTATGATTGATGGTCAAACTACTGGATTTTGTGCTGATGGCTGTTCGGCAATTGCTGATTCTGGAACTTCTTTGTTGGTTGGCCCAACGACTATTATCACTGAACTTAATCATGCCATTGGAGCCTCTGGGATTGTAAGTCAAGAGTGCAAGACTGTAGTTGCAGAATATGGGGAAACCATAATTGAGAGAATTTTAGCAAAGGATCAACCAGCGAAAATCTGCTCTCAGATTGGTTTGTGCTCATTCGATGGGACTCGTGGTGTTAGTATTGGACTCAAGAGTGTTGTGGAGGAGAACGCTCACAAGGTTTCTGGTGGCTTATCTGATGCGACATGTTCTGCTTGTGAGATGACGGTTGTATGGATGCAAAACCAGCTCAAGCAGAATCAGACACAGGAACGAATTCTTGACTATGTGAATCAGCTCTGTGATCGGTTGCCTAGCCCAATGGGAGAATCTGCAGTTGATTGTGGTGGTTTGTCTTCCATGCCCAATGTTTCCTTTACAATTGGTGGACAAACATTTGATCTCACCCCTGAGCAGTATGTGCTCAAGGTAGGCGAGGGAGATGTAGCACAATGCATTAGTGGATTTACTGCTTTGGATGTCCCGCCTCCCCGCGGACCTCTCTGGATCTTGGGAGATGTATTCATGGGTCGCTACCATACTGTGTTTGACTATGGCAATGAGAGAATCGGGTTTGCGGAAGCTGCATAG

Protein Analysis

530

Amino Acids

57.5

Weight (kDa)

4.82

Isoelectric Point (pI)

34.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 47
AccII CGCG 1 cut(s) 1494
AccIII TCCGGA 1 cut(s) 243
AciI CCGC 4 cut(s) 1484, 1492, 1494, 1577
AclWI GGATC 2 cut(s) 1083, 1514
AcsI RAATTY 5 cut(s) 358, 575, 623, 1062, 1275
AcuI CTGAAG 1 cut(s) 734
AfaI GTAC 2 cut(s) 500, 678
AfiI CCNNNNNNNGG 1 cut(s) 1493
AflIII ACRYGT 1 cut(s) 1205
AgsI TTSAA 1 cut(s) 653
AjnI CCWGG 1 cut(s) 612
AjuI GAANNNNNNNTTGG 2 cut(s) 765, 797
AluBI AGCT 7 cut(s) 28, 72, 329, 512, 1249, 1297, 1583
AluI AGCT 7 cut(s) 28, 72, 329, 512, 1249, 1297, 1583
Alw21I GWGCWC 3 cut(s) 69, 1115, 1425
Alw26I GTCTC 3 cut(s) 33, 257, 713
AlwI GGATC 2 cut(s) 1083, 1514
Aor13HI TCCGGA 1 cut(s) 243
AoxI GGCC 1 cut(s) 952
ApeKI GCWGC 3 cut(s) 329, 488, 1583
ApoI RAATTY 5 cut(s) 358, 575, 623, 1062, 1275
ArsI GACNNNNNNTTYG 2 cut(s) 331, 363
Asp700I GAANNNNTTC 1 cut(s) 1275
AspLEI GCGC 1 cut(s) 108
AspS9I GGNCC 4 cut(s) 19, 793, 953, 1496
AsuC2I CCSGG 1 cut(s) 600
AsuHPI GGTGA 5 cut(s) 46, 437, 782, 878, 1396
AvaII GGWCC 3 cut(s) 19, 793, 1496
BauI CACGAG 2 cut(s) 62, 1128
BbsI GAAGAC 3 cut(s) 43, 120, 1347
Bbv12I GWGCWC 3 cut(s) 69, 1115, 1425
BbvI GCAGC 3 cut(s) 316, 500, 1570
BccI CCATC 6 cut(s) 227, 500, 623, 875, 902, 1115
BciT130I CCWGG 1 cut(s) 614
BclI TGATCA 1 cut(s) 271
BcnI CCSGG 1 cut(s) 600
BcoDI GTCTC 3 cut(s) 33, 257, 713
BfaI CTAG 1 cut(s) 1314
BfmI CTRYAG 4 cut(s) 45, 486, 1026, 1332
BisI GCNGC 3 cut(s) 330, 489, 1584
BlsI GCNGC 3 cut(s) 331, 490, 1585
Bme1390I CCNGG 2 cut(s) 600, 614
Bme18I GGWCC 3 cut(s) 19, 793, 1496
BmgT120I GGNCC 4 cut(s) 19, 793, 953, 1496
BmiI GGNNCC 5 cut(s) 21, 597, 720, 795, 994
BmrFI CCNGG 2 cut(s) 600, 614
BmsI GCATC 4 cut(s) 400, 612, 1189, 1227
BpiI GAAGAC 3 cut(s) 43, 120, 1347
BplI GAGNNNNNCTC 6 cut(s) 56, 88, 316, 348, 318, 350
BpmI CTGGAG 1 cut(s) 528
Bpu10I CCTNAGC 1 cut(s) 1410
BpuEI CTTGAG 4 cut(s) 380, 1133, 1235, 1409
BpuMI CCSGG 1 cut(s) 600
BsaI GGTCTC 2 cut(s) 257, 713
BsaJI CCNNGG 2 cut(s) 306, 1492
BsaWI WCCGGW 1 cut(s) 243
Bsc4I CCNNNNNNNGG 1 cut(s) 1493
Bse1I ACTGG 5 cut(s) 481, 496, 511, 722, 898
Bse3DI GCAATG 1 cut(s) 1564
BseAI TCCGGA 1 cut(s) 243
BseBI CCWGG 1 cut(s) 614
BseDI CCNNGG 2 cut(s) 306, 1492
BseGI GGATG 4 cut(s) 415, 492, 1242, 1483
BseLI CCNNNNNNNGG 1 cut(s) 1493
BseMI GCAATG 1 cut(s) 1564
BseMII CTCAG 6 cut(s) 314, 357, 363, 464, 1112, 1401
BseNI ACTGG 5 cut(s) 481, 496, 511, 722, 898
BseRI GAGGAG 2 cut(s) 102, 1178
BseXI GCAGC 3 cut(s) 316, 500, 1570
Bsh1236I CGCG 1 cut(s) 1494
BshFI GGCC 1 cut(s) 954
BsiHKAI GWGCWC 3 cut(s) 69, 1115, 1425
BsiSI CCGG 2 cut(s) 244, 600
BslFI GGGAC 2 cut(s) 1138, 1466
BslI CCNNNNNNNGG 1 cut(s) 1493
BsmAI GTCTC 3 cut(s) 33, 257, 713
BsmFI GGGAC 2 cut(s) 1138, 1466
BsnI GGCC 1 cut(s) 954
Bso31I GGTCTC 2 cut(s) 257, 713
Bsp1286I GDGCHC 3 cut(s) 69, 1115, 1425
Bsp13I TCCGGA 1 cut(s) 243
Bsp143I GATC 8 cut(s) 271, 535, 553, 568, 1075, 1303, 1399, 1506
BspACI CCGC 4 cut(s) 1484, 1492, 1494, 1577
BspANI GGCC 1 cut(s) 954
BspCNI CTCAG 6 cut(s) 315, 358, 364, 463, 1111, 1402
BspEI TCCGGA 1 cut(s) 243
BspFNI CGCG 1 cut(s) 1494
BspLI GGNNCC 5 cut(s) 21, 597, 720, 795, 994
BspMAI CTGCAG 2 cut(s) 490, 1336
BspPI GGATC 2 cut(s) 1083, 1514
BspTNI GGTCTC 2 cut(s) 257, 713
BsrDI GCAATG 1 cut(s) 1564
BsrI ACTGG 5 cut(s) 481, 496, 511, 722, 898
BssECI CCNNGG 2 cut(s) 306, 1492
BssMI GATC 8 cut(s) 271, 535, 553, 568, 1075, 1303, 1399, 1506
BssSI CACGAG 2 cut(s) 62, 1128
BssT1I CCWWGG 1 cut(s) 306
Bst2BI CACGAG 2 cut(s) 62, 1128
Bst2UI CCWGG 1 cut(s) 614
Bst4CI ACNGT 6 cut(s) 463, 547, 746, 1027, 1228, 1543
BstAPI GCANNNNNTGC 1 cut(s) 1420
BstC8I GCNNGC 2 cut(s) 197, 486
BstDEI CTNAG 6 cut(s) 323, 366, 372, 450, 1098, 1410
BstDSI CCRYGG 1 cut(s) 1492
BstF5I GGATG 4 cut(s) 415, 492, 1242, 1483
BstFNI CGCG 1 cut(s) 1494
BstHHI GCGC 1 cut(s) 108
BstKTI GATC 8 cut(s) 274, 538, 556, 571, 1078, 1306, 1402, 1509
BstMAI GTCTC 3 cut(s) 33, 257, 713
BstMBI GATC 8 cut(s) 271, 535, 553, 568, 1075, 1303, 1399, 1506
BstMWI GCNNNNNNNGC 5 cut(s) 326, 992, 1246, 1420, 1583
BstNI CCWGG 1 cut(s) 614
BstNSI RCATGY 1 cut(s) 1209
BstSCI CCNGG 2 cut(s) 598, 612
BstSFI CTRYAG 4 cut(s) 45, 486, 1026, 1332
BstUI CGCG 1 cut(s) 1494
BstV1I GCAGC 3 cut(s) 316, 500, 1570
BstV2I GAAGAC 3 cut(s) 43, 120, 1347
BstX2I RGATCY 1 cut(s) 1506
BstYI RGATCY 1 cut(s) 1506
BsuRI GGCC 1 cut(s) 954
BtgI CCRYGG 1 cut(s) 1492
BtsCI GGATG 4 cut(s) 415, 492, 1242, 1483
BtsIMutI CAGTG 2 cut(s) 459, 969
Cac8I GCNNGC 2 cut(s) 197, 486
CfoI GCGC 1 cut(s) 108
Cfr13I GGNCC 4 cut(s) 19, 793, 953, 1496
Cfr42I CCGCGG 1 cut(s) 1495
Csp6I GTAC 2 cut(s) 499, 677
CviAII CATG 9 cut(s) 151, 406, 539, 694, 862, 983, 1206, 1360, 1525
CviQI GTAC 2 cut(s) 499, 677
DdeI CTNAG 6 cut(s) 323, 366, 372, 450, 1098, 1410
DpnI GATC 8 cut(s) 273, 537, 555, 570, 1077, 1305, 1401, 1508
DpnII GATC 8 cut(s) 271, 535, 553, 568, 1075, 1303, 1399, 1506
DraI TTTAAA 1 cut(s) 147
DrdI GACNNNNNNGTC 1 cut(s) 47
DseDI GACNNNNNNGTC 1 cut(s) 47
Eco130I CCWWGG 1 cut(s) 306
Eco31I GGTCTC 2 cut(s) 257, 713
Eco47I GGWCC 3 cut(s) 19, 793, 1496
Eco57I CTGAAG 1 cut(s) 734
EcoRI GAATTC 1 cut(s) 1275
EcoRII CCWGG 1 cut(s) 612
EcoT14I CCWWGG 1 cut(s) 306
EcoT22I ATGCAT 1 cut(s) 1457
ErhI CCWWGG 1 cut(s) 306
FaeI CATG 9 cut(s) 154, 409, 542, 697, 865, 986, 1209, 1363, 1528
FaqI GGGAC 2 cut(s) 1138, 1466
FatI CATG 9 cut(s) 150, 405, 538, 693, 861, 982, 1205, 1359, 1524
FauI CCCGC 2 cut(s) 1491, 1499
FauNDI CATATG 1 cut(s) 823
FbaI TGATCA 1 cut(s) 271
Fnu4HI GCNGC 3 cut(s) 330, 489, 1584
FokI GGATG 4 cut(s) 422, 479, 1249, 1490
Fsp4HI GCNGC 3 cut(s) 330, 489, 1584
FspBI CTAG 1 cut(s) 1314
GlaI GCGC 1 cut(s) 107
GluI GCNGC 3 cut(s) 330, 489, 1584
GsuI CTGGAG 1 cut(s) 528
HaeIII GGCC 1 cut(s) 954
HapII CCGG 2 cut(s) 244, 600
HhaI GCGC 1 cut(s) 108
Hin1II CATG 9 cut(s) 154, 409, 542, 697, 865, 986, 1209, 1363, 1528
Hin6I GCGC 1 cut(s) 106
HinP1I GCGC 1 cut(s) 106
HpaII CCGG 2 cut(s) 244, 600
HphI GGTGA 5 cut(s) 46, 437, 782, 878, 1396
Hpy166II GTNNAC 3 cut(s) 459, 793, 1388
Hpy188I TCNGA 8 cut(s) 19, 38, 324, 373, 453, 1101, 1198, 1263
Hpy8I GTNNAC 3 cut(s) 459, 793, 1388
HpyAV CCTTC 3 cut(s) 305, 709, 758
HpyCH4III ACNGT 6 cut(s) 463, 547, 746, 1027, 1228, 1543
HpyCH4V TGCA 7 cut(s) 488, 1020, 1034, 1240, 1334, 1455, 1586
HpyF10VI GCNNNNNNNGC 5 cut(s) 326, 992, 1246, 1420, 1583
HpyF3I CTNAG 6 cut(s) 323, 366, 372, 450, 1098, 1410
Hsp92II CATG 9 cut(s) 154, 409, 542, 697, 865, 986, 1209, 1363, 1528
HspAI GCGC 1 cut(s) 106
Kpn2I TCCGGA 1 cut(s) 243
Ksp22I TGATCA 1 cut(s) 271
KspI CCGCGG 1 cut(s) 1495
Kzo9I GATC 8 cut(s) 271, 535, 553, 568, 1075, 1303, 1399, 1506
LmnI GCTCC 3 cut(s) 246, 509, 992
Lsp1109I GCAGC 3 cut(s) 316, 500, 1570
LweI GCATC 4 cut(s) 400, 612, 1189, 1227
MaeI CTAG 1 cut(s) 1314
MaeIII GTNAC 3 cut(s) 172, 541, 832
MalI GATC 8 cut(s) 273, 537, 555, 570, 1077, 1305, 1401, 1508
MboI GATC 8 cut(s) 271, 535, 553, 568, 1075, 1303, 1399, 1506
MboII GAAGA 6 cut(s) 43, 120, 545, 770, 773, 1347
MfeI CAATTG 2 cut(s) 921, 1380
MflI RGATCY 1 cut(s) 1506
MhlI GDGCHC 3 cut(s) 69, 1115, 1425
MlyI GAGTC 6 cut(s) 35, 175, 233, 377, 1120, 1140
MmeI TCCRAC 1 cut(s) 646
Mph1103I ATGCAT 1 cut(s) 1457
MroI TCCGGA 1 cut(s) 243
MroXI GAANNNNTTC 1 cut(s) 1275
MseI TTAA 4 cut(s) 146, 564, 741, 978
MslI CAYNNNNRTG 1 cut(s) 822
MspA1I CMGCKG 1 cut(s) 1494
MspI CCGG 2 cut(s) 244, 600
MspR9I CCNGG 2 cut(s) 600, 614
MunI CAATTG 2 cut(s) 921, 1380
MvaI CCWGG 1 cut(s) 614
MvnI CGCG 1 cut(s) 1494
MwoI GCNNNNNNNGC 5 cut(s) 326, 992, 1246, 1420, 1583
NciI CCSGG 1 cut(s) 600
NdeI CATATG 1 cut(s) 823
NdeII GATC 8 cut(s) 271, 535, 553, 568, 1075, 1303, 1399, 1506
NlaIII CATG 9 cut(s) 154, 409, 542, 697, 865, 986, 1209, 1363, 1528
NlaIV GGNNCC 5 cut(s) 21, 597, 720, 795, 994
NmuCI GTSAC 1 cut(s) 541
NsiI ATGCAT 1 cut(s) 1457
NspI RCATGY 1 cut(s) 1209
PciI ACATGT 1 cut(s) 1205
PdmI GAANNNNTTC 1 cut(s) 1275
PfeI GAWTC 6 cut(s) 302, 929, 1258, 1291, 1328, 1566
PkrI GCNGC 3 cut(s) 331, 490, 1585
PleI GAGTC 6 cut(s) 35, 175, 232, 376, 1120, 1140
PpsI GAGTC 6 cut(s) 35, 175, 232, 376, 1120, 1140
PscI ACATGT 1 cut(s) 1205
Psp6I CCWGG 1 cut(s) 612
PspGI CCWGG 1 cut(s) 612
PspN4I GGNNCC 5 cut(s) 21, 597, 720, 795, 994
PspPI GGNCC 4 cut(s) 19, 793, 953, 1496
PstI CTGCAG 2 cut(s) 490, 1336
PsuI RGATCY 1 cut(s) 1506
RsaI GTAC 2 cut(s) 500, 678
RsaNI GTAC 2 cut(s) 499, 677
RseI CAYNNNNRTG 1 cut(s) 822
SacII CCGCGG 1 cut(s) 1495
SaqAI TTAA 4 cut(s) 146, 564, 741, 978
SatI GCNGC 3 cut(s) 330, 489, 1584
Sau3AI GATC 8 cut(s) 271, 535, 553, 568, 1075, 1303, 1399, 1506
Sau96I GGNCC 4 cut(s) 19, 793, 953, 1496
SchI GAGTC 6 cut(s) 35, 175, 233, 377, 1120, 1140
ScrFI CCNGG 2 cut(s) 600, 614
SduI GDGCHC 3 cut(s) 69, 1115, 1425
SfaNI GCATC 4 cut(s) 400, 612, 1189, 1227
SfcI CTRYAG 4 cut(s) 45, 486, 1026, 1332
Sfr303I CCGCGG 1 cut(s) 1495
SgrBI CCGCGG 1 cut(s) 1495
SinI GGWCC 3 cut(s) 19, 793, 1496
SmiMI CAYNNNNRTG 1 cut(s) 822
SmlI CTYRAG 4 cut(s) 395, 1148, 1250, 1424
SmoI CTYRAG 4 cut(s) 395, 1148, 1250, 1424
SsiI CCGC 4 cut(s) 1484, 1492, 1494, 1577
SspMI CTAG 1 cut(s) 1314
StyD4I CCNGG 2 cut(s) 598, 612
StyI CCWWGG 1 cut(s) 306
TaaI ACNGT 6 cut(s) 463, 547, 746, 1027, 1228, 1543
TaqI TCGA 1 cut(s) 1119
TfiI GAWTC 6 cut(s) 302, 929, 1258, 1291, 1328, 1566
Tru1I TTAA 4 cut(s) 146, 564, 741, 978
Tru9I TTAA 4 cut(s) 146, 564, 741, 978
TscAI CASTG 2 cut(s) 466, 976
TseFI GTSAC 1 cut(s) 541
TseI GCWGC 3 cut(s) 329, 488, 1583
Tsp45I GTSAC 1 cut(s) 541
TspDTI ATGAA 2 cut(s) 771, 1513
TspGWI ACGGA 2 cut(s) 198, 516
TspRI CASTG 2 cut(s) 466, 976
VpaK11BI GGWCC 3 cut(s) 19, 793, 1496
XapI RAATTY 5 cut(s) 358, 575, 623, 1062, 1275
XceI RCATGY 1 cut(s) 1209
XcmI CCANNNNNNNNNTGG 1 cut(s) 503
XmnI GAANNNNTTC 1 cut(s) 1275
XspI CTAG 1 cut(s) 1314
Zsp2I ATGCAT 1 cut(s) 1457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.